SUPERFAMILY 1.75 HMM library and genome assignments server

Positive stranded ssRNA viruses superfamily

SCOP classification
Root:   SCOP hierarchy in SUPERFAMILY [ 0] (11)
Class:   All beta proteins [ 48724] (174)
Fold:   Nucleoplasmin-like/VP (viral coat and capsid proteins) [ 88632] (7)
Superfamily:   Positive stranded ssRNA viruses [ 88633] (9)
Families:   Picornaviridae-like VP (VP1, VP2, VP3 and VP4) [ 88634] (9)
  Comoviridae-like VP [ 88636] (2)
  Caliciviridae-like VP [ 88637]
  Nodaviridae-like VP [ 88638]
  Tetraviridae-like VP [ 101568]
  Bromoviridae-like VP [ 88639]
  Tymoviridae-like VP [ 88641]
  Tombusviridae-like VP [ 88643] (4)
  Birnaviridae-like VP [ 141109]


Superfamily statistics
Genomes (102) Uniprot 2014_06 PDB chains (SCOP 1.75)
Domains 131 74,413 163
Proteins 131 68,160 157


Functional annotation
General category Other
Detailed category Viral proteins

Document:
Function annotation of SCOP domain superfamilies