SUPERFAMILY 1.75 HMM library and genome assignments server

Delta-sleep-inducing peptide immunoreactive peptide superfamily

SCOP classification
Root:   SCOP hierarchy in SUPERFAMILY [ 0] (11)
Class:   Coiled coil proteins [ 57942] (7)
Fold:   Parallel coiled-coil [ 57943] (34)
Superfamily:   Delta-sleep-inducing peptide immunoreactive peptide [ 58026]
Families:   Delta-sleep-inducing peptide immunoreactive peptide [ 58027]


Superfamily statistics
Genomes (177) Uniprot 2014_06 PDB chains (SCOP 1.75)
Domains 484 755 1
Proteins 483 755 1


Functional annotation
General category Other
Detailed category Unknown function

Document:
Function annotation of SCOP domain superfamilies

Gene Ontology (high-quality)

(show details)
GO termFDR (singleton)FDR (all)SDFO levelAnnotation (direct or inherited)
Biological Process (BP)regulation of cellular process0.021480.007284Least InformativeInherited
Biological Process (BP)response to stimulus0.0027890.0006126Least InformativeInherited
Biological Process (BP)response to abiotic stimulus0.000000065710.000000001971Moderately InformativeDirect
Biological Process (BP)negative regulation of cellular process0.00069510.0002173Moderately InformativeDirect
Biological Process (BP)negative regulation of cell death0.0000041290.00000001153InformativeDirect
Biological Process (BP)negative regulation of apoptotic process0.0000024260.0000000000006999Highly InformativeDirect
Cellular Component (CC)intracellular membrane-bounded organelle0.017660.00858Least InformativeInherited

Document: GO annotation of SCOP domains

Gene Ontology (high-coverage)

(show details)
GO term FDR (all) SDFO level Annotation (direct or inherited)
Biological Process (BP) response to stimulus 0.0006126 Least Informative Direct
Biological Process (BP) regulation of cellular process 0.007284 Least Informative Inherited
Biological Process (BP) response to abiotic stimulus 0.000000001971 Moderately Informative Direct
Biological Process (BP) negative regulation of cellular process 0.0002173 Moderately Informative Direct
Biological Process (BP) positive regulation of cellular process 0.02139 Moderately Informative Inherited
Biological Process (BP) regulation of cell proliferation 0.00001111 Informative Direct
Biological Process (BP) negative regulation of cell death 0.00000001153 Informative Direct
Biological Process (BP) negative regulation of apoptotic process 0.0000000000006999 Highly Informative Direct
Cellular Component (CC) intracellular membrane-bounded organelle 0.00858 Least Informative Inherited

Document: GO annotation of SCOP domains

Worm Phenotype (WP)

(show details) Document: WP annotation of SCOP domains

Xenopus Anatomy (XA)

(show details)
XA termFDR (all)SDXA levelAnnotation (direct or inherited)
Xenopus ANatomical entity (XAN)embryo0Least InformativeDirect
Xenopus ANatomical entity (XAN)viscus0Least InformativeDirect
Xenopus ANatomical entity (XAN)head0Least InformativeDirect
Xenopus ANatomical entity (XAN)gonad0Least InformativeDirect
Xenopus ANatomical entity (XAN)male organism0Least InformativeDirect
Xenopus ANatomical entity (XAN)alimentary system0Least InformativeDirect
Xenopus ANatomical entity (XAN)portion of tissue0Least InformativeDirect
Xenopus ANatomical entity (XAN)genital system0Least InformativeDirect
Xenopus ANatomical entity (XAN)central nervous system0Least InformativeDirect
Xenopus ANatomical entity (XAN)multi-tissue structure0Moderately InformativeDirect
Xenopus ANatomical entity (XAN)ectoderm0Moderately InformativeDirect
Xenopus ANatomical entity (XAN)immune system0Moderately InformativeDirect
Xenopus ANatomical entity (XAN)oviduct0InformativeDirect
Xenopus ANatomical entity (XAN)spleen0InformativeDirect

Document: XA annotation of SCOP domains

UniProtKB KeyWords (KW)

(show details)
KW termFDR (all)SDKW levelAnnotation (direct or inherited)
Biological processTranscription regulation0.000000000000144Moderately InformativeDirect
Cellular componentNucleus0Least InformativeDirect
Coding sequence diversityAlternative splicing0.000000000725Least InformativeDirect
Post-translational modificationRepressor4.449e-16Moderately InformativeDirect
Post-translational modificationPhosphoprotein0.0002499Least InformativeDirect

Document: KW annotation of SCOP domains

Jump to [ Top of page · SCOP classification · Functional annotation · Gene Ontology (high-quality) · Gene Ontology (high-coverage) · Worm Phenotype (WP) · Xenopus Anatomy (XA) · UniProtKB KeyWords (KW) ]

Internal database links

Browse genome assignments for this superfamily. The SUPERFAMILY hidden Markov model library has been used to carry out SCOP domain assignments to all genomes at the superfamily level.


Alignments of sequences to 1 models in this superfamily are available by clicking on the 'Alignments' icon above. PDB sequences less than 40% identical are shown by default, but any other sequence(s) may be aligned. Select PDB sequences, genome sequences, or paste in or upload your own sequences.


Browse and view proteins in genomes which have different domain combinations including a Delta-sleep-inducing peptide immunoreactive peptide domain.


Examine the distribution of domain superfamilies, or families, across the major taxonomic kingdoms or genomes within a kingdom. This gives an immediate impression of how superfamilies, or families, are restricted to certain kingdoms of life.


Explore domain occurrence network where nodes represent genomes and edges are domain architectures (shared between genomes) containing the superfamily of interest.

There are 1 hidden Markov models representing the Delta-sleep-inducing peptide immunoreactive peptide superfamily. Information on how the models are built, and plots showing hydrophobicity, match emmission probabilities and insertion/deletion probabilities can be inspected.


Jump to [ Top of page · SCOP classification · Functional annotation · Gene Ontology (high-quality) · Gene Ontology (high-coverage) · Worm Phenotype (WP) · Xenopus Anatomy (XA) · UniProtKB KeyWords (KW) · Internal database links ]