|
GO term |
FDR (all) |
IC level |
SDFO level |
Annotation (direct or inherited) |
| Biological Process (BP) |
nucleobase-containing compound metabolic process |
0.0004265 |
0.7305 |
-- |
DIRECT |
| Biological Process (BP) |
endocytosis |
0.000928 |
1.854 |
-- |
DIRECT |
| Biological Process (BP) |
phagocytosis, engulfment |
1.469e-09 |
2.398 |
-- |
DIRECT |
| Biological Process (BP) |
macromolecule biosynthetic process |
2.274e-06 |
0.8861 |
-- |
DIRECT |
| Biological Process (BP) |
membrane invagination |
2.456e-09 |
2.398 |
-- |
DIRECT |
| Biological Process (BP) |
regulation of macromolecule biosynthetic process |
2.251e-10 |
1.066 |
-- |
DIRECT |
| Biological Process (BP) |
regulation of cellular biosynthetic process |
5.955e-10 |
1.009 |
-- |
DIRECT |
| Biological Process (BP) |
RNA biosynthetic process |
1.14e-09 |
1.62 |
-- |
DIRECT |
| Biological Process (BP) |
nucleobase-containing compound biosynthetic process |
1.454e-08 |
1.167 |
-- |
DIRECT |
| Biological Process (BP) |
cellular biosynthetic process |
0.0001492 |
0.5498 |
-- |
DIRECT |
| Biological Process (BP) |
regulation of RNA metabolic process |
0.0001494 |
1.131 |
-- |
DIRECT |
| Biological Process (BP) |
regulation of macromolecule metabolic process |
9.521e-08 |
0.7959 |
-- |
DIRECT |
| Biological Process (BP) |
membrane organization |
7.551e-05 |
1.523 |
-- |
DIRECT |
| Biological Process (BP) |
regulation of primary metabolic process |
1.224e-07 |
0.7852 |
-- |
DIRECT |
| Biological Process (BP) |
nucleic acid metabolic process |
2.693e-05 |
0.9066 |
-- |
DIRECT |
| Biological Process (BP) |
organic substance biosynthetic process |
0.0007589 |
0.5376 |
-- |
DIRECT |
| Biological Process (BP) |
regulation of biological process |
0.2715 |
0.4486 |
-- |
INHERITED FROM: regulation of primary metabolic process || regulation of RNA metabolic process || regulation of macromolecule biosynthetic process || regulation of metabolic process || regulation of cellular metabolic process || regulation of nitrogen compound metabolic process || regulation of biosynthetic process || regulation of transcription from RNA polymerase II promoter || regulation of cellular biosynthetic process || regulation of macromolecule metabolic process |
| Biological Process (BP) |
biological regulation |
0.01725 |
0.4202 |
-- |
INHERITED FROM: regulation of primary metabolic process || regulation of RNA metabolic process || regulation of macromolecule biosynthetic process || regulation of metabolic process || regulation of cellular metabolic process || regulation of nitrogen compound metabolic process || regulation of biosynthetic process || regulation of transcription from RNA polymerase II promoter || regulation of cellular biosynthetic process || regulation of macromolecule metabolic process |
| Biological Process (BP) |
biological_process |
1 |
0 |
-- |
INHERITED FROM: regulation of primary metabolic process || transcription, DNA-dependent || gene expression || aromatic compound biosynthetic process || nucleobase-containing compound metabolic process || RNA metabolic process || heterocycle biosynthetic process || DNA-dependent transcription, elongation || membrane organization || endocytosis || cellular macromolecule biosynthetic process || RNA biosynthetic process || regulation of nitrogen compound metabolic process || membrane invagination || phagocytosis, engulfment || cellular biosynthetic process || regulation of transcription from RNA polymerase II promoter || regulation of cellular biosynthetic process || nucleic acid metabolic process || regulation of macromolecule metabolic process || cellular membrane organization || macromolecule biosynthetic process || regulation of RNA metabolic process || organic substance biosynthetic process || transcription elongation from RNA polymerase II promoter || nucleobase-containing compound biosynthetic process || phagocytosis || regulation of macromolecule biosynthetic process || regulation of metabolic process || regulation of cellular metabolic process || cellular nitrogen compound biosynthetic process || organic cyclic compound biosynthetic process || biosynthetic process || regulation of biosynthetic process || transcription from RNA polymerase II promoter |
| Biological Process (BP) |
metabolic process |
0.6123 |
0.2411 |
-- |
INHERITED FROM: cellular nitrogen compound biosynthetic process || cellular macromolecule biosynthetic process || RNA biosynthetic process || macromolecule biosynthetic process || organic substance biosynthetic process || organic cyclic compound biosynthetic process || transcription elongation from RNA polymerase II promoter || biosynthetic process || nucleobase-containing compound biosynthetic process || transcription, DNA-dependent || gene expression || aromatic compound biosynthetic process || nucleobase-containing compound metabolic process || RNA metabolic process || heterocycle biosynthetic process || cellular biosynthetic process || DNA-dependent transcription, elongation || transcription from RNA polymerase II promoter || nucleic acid metabolic process |
| Biological Process (BP) |
cellular metabolic process |
0.3903 |
0.2708 |
-- |
INHERITED FROM: cellular nitrogen compound biosynthetic process || cellular macromolecule biosynthetic process || RNA biosynthetic process || transcription elongation from RNA polymerase II promoter || nucleobase-containing compound biosynthetic process || transcription, DNA-dependent || aromatic compound biosynthetic process || nucleobase-containing compound metabolic process || RNA metabolic process || heterocycle biosynthetic process || cellular biosynthetic process || DNA-dependent transcription, elongation || transcription from RNA polymerase II promoter || nucleic acid metabolic process |
| Biological Process (BP) |
organic substance metabolic process |
0.589 |
0.2676 |
-- |
INHERITED FROM: cellular macromolecule biosynthetic process || RNA biosynthetic process || macromolecule biosynthetic process || organic substance biosynthetic process || organic cyclic compound biosynthetic process || transcription elongation from RNA polymerase II promoter || nucleobase-containing compound biosynthetic process || transcription, DNA-dependent || gene expression || nucleobase-containing compound metabolic process || RNA metabolic process || DNA-dependent transcription, elongation || transcription from RNA polymerase II promoter || nucleic acid metabolic process |
| Biological Process (BP) |
cellular nitrogen compound metabolic process |
0.002485 |
0.585 |
-- |
INHERITED FROM: RNA biosynthetic process || DNA-dependent transcription, elongation || transcription from RNA polymerase II promoter || cellular nitrogen compound biosynthetic process || nucleic acid metabolic process || transcription elongation from RNA polymerase II promoter || nucleobase-containing compound metabolic process || RNA metabolic process || nucleobase-containing compound biosynthetic process || transcription, DNA-dependent |
| Biological Process (BP) |
single-organism process |
1 |
0.3316 |
-- |
INHERITED FROM: cellular membrane organization || phagocytosis || membrane invagination || phagocytosis, engulfment |
| Biological Process (BP) |
cellular process |
0.5132 |
0.1415 |
-- |
INHERITED FROM: cellular membrane organization || transcription elongation from RNA polymerase II promoter || nucleobase-containing compound biosynthetic process || transcription, DNA-dependent || aromatic compound biosynthetic process || nucleobase-containing compound metabolic process || RNA metabolic process || heterocycle biosynthetic process || DNA-dependent transcription, elongation || cellular nitrogen compound biosynthetic process || cellular macromolecule biosynthetic process || RNA biosynthetic process || membrane invagination || phagocytosis, engulfment || cellular biosynthetic process || transcription from RNA polymerase II promoter || nucleic acid metabolic process |
| Biological Process (BP) |
macromolecule metabolic process |
0.1169 |
0.4634 |
-- |
INHERITED FROM: gene expression || cellular macromolecule biosynthetic process || RNA metabolic process || RNA biosynthetic process || DNA-dependent transcription, elongation || macromolecule biosynthetic process || transcription from RNA polymerase II promoter || nucleic acid metabolic process || transcription elongation from RNA polymerase II promoter || transcription, DNA-dependent |
| Biological Process (BP) |
cellular component organization |
0.2906 |
0.6819 |
-- |
INHERITED FROM: membrane invagination || membrane organization || phagocytosis, engulfment || cellular membrane organization |
| Biological Process (BP) |
single-organism transport |
0.1555 |
0.8013 |
-- |
INHERITED FROM: phagocytosis || phagocytosis, engulfment |
| Biological Process (BP) |
transport |
0.2434 |
0.7747 |
-- |
INHERITED FROM: phagocytosis || endocytosis || phagocytosis, engulfment |
| Biological Process (BP) |
establishment of localization |
0.2695 |
0.7696 |
-- |
INHERITED FROM: phagocytosis || endocytosis || phagocytosis, engulfment |
| Biological Process (BP) |
regulation of nucleobase-containing compound metabolic process |
0.003073 |
1.027 |
-- |
INHERITED FROM: regulation of transcription from RNA polymerase II promoter || regulation of RNA metabolic process |
| Biological Process (BP) |
regulation of transcription, DNA-dependent |
0.05997 |
1.237 |
-- |
INHERITED FROM: regulation of transcription from RNA polymerase II promoter |
| Biological Process (BP) |
regulation of cellular macromolecule biosynthetic process |
0.2829 |
1.119 |
-- |
INHERITED FROM: regulation of transcription from RNA polymerase II promoter |
| Biological Process (BP) |
regulation of RNA biosynthetic process |
0.02943 |
1.167 |
-- |
INHERITED FROM: regulation of transcription from RNA polymerase II promoter |
| Biological Process (BP) |
primary metabolic process |
0.5568 |
0.2976 |
-- |
INHERITED FROM: nucleobase-containing compound metabolic process || RNA metabolic process || RNA biosynthetic process || DNA-dependent transcription, elongation || transcription from RNA polymerase II promoter || nucleic acid metabolic process || transcription elongation from RNA polymerase II promoter || nucleobase-containing compound biosynthetic process || transcription, DNA-dependent |
| Biological Process (BP) |
biosynthetic process |
0.0003693 |
0.52 |
Least Informative |
DIRECT |
| Biological Process (BP) |
regulation of metabolic process |
1.652e-06 |
0.6946 |
Least Informative |
DIRECT |
| Biological Process (BP) |
regulation of cellular process |
0.00397 |
0.5317 |
Least Informative |
INHERITED FROM: regulation of RNA metabolic process || regulation of transcription from RNA polymerase II promoter || regulation of cellular metabolic process || regulation of cellular biosynthetic process |
| Biological Process (BP) |
nitrogen compound metabolic process |
0.01021 |
0.5171 |
Least Informative |
INHERITED FROM: cellular nitrogen compound biosynthetic process || nucleobase-containing compound metabolic process || RNA metabolic process || RNA biosynthetic process || DNA-dependent transcription, elongation || transcription from RNA polymerase II promoter || nucleic acid metabolic process || transcription elongation from RNA polymerase II promoter || nucleobase-containing compound biosynthetic process || transcription, DNA-dependent |
| Biological Process (BP) |
cellular macromolecule metabolic process |
0.05745 |
0.4976 |
Least Informative |
INHERITED FROM: RNA biosynthetic process || DNA-dependent transcription, elongation || transcription from RNA polymerase II promoter || transcription elongation from RNA polymerase II promoter || cellular macromolecule biosynthetic process || RNA metabolic process || transcription, DNA-dependent |
| Biological Process (BP) |
cellular aromatic compound metabolic process |
0.00197 |
0.6271 |
Least Informative |
INHERITED FROM: aromatic compound biosynthetic process || nucleobase-containing compound metabolic process || RNA metabolic process || RNA biosynthetic process || DNA-dependent transcription, elongation || transcription from RNA polymerase II promoter || nucleic acid metabolic process || transcription elongation from RNA polymerase II promoter || nucleobase-containing compound biosynthetic process || transcription, DNA-dependent |
| Biological Process (BP) |
heterocycle metabolic process |
0.001529 |
0.6308 |
Least Informative |
INHERITED FROM: heterocycle biosynthetic process || RNA biosynthetic process || DNA-dependent transcription, elongation || transcription from RNA polymerase II promoter || nucleic acid metabolic process || transcription elongation from RNA polymerase II promoter || nucleobase-containing compound metabolic process || RNA metabolic process || nucleobase-containing compound biosynthetic process || transcription, DNA-dependent |
| Biological Process (BP) |
single-organism cellular process |
0.8521 |
0.3915 |
Least Informative |
INHERITED FROM: cellular membrane organization || membrane invagination || phagocytosis, engulfment |
| Biological Process (BP) |
cellular component organization or biogenesis |
0.3575 |
0.6536 |
Least Informative |
INHERITED FROM: membrane invagination || membrane organization || phagocytosis, engulfment || cellular membrane organization |
| Biological Process (BP) |
localization |
0.3662 |
0.6946 |
Least Informative |
INHERITED FROM: phagocytosis || endocytosis || phagocytosis, engulfment |
| Biological Process (BP) |
organic cyclic compound metabolic process |
0.003931 |
0.5817 |
Least Informative |
INHERITED FROM: nucleobase-containing compound metabolic process || RNA metabolic process || RNA biosynthetic process || DNA-dependent transcription, elongation || transcription from RNA polymerase II promoter || organic cyclic compound biosynthetic process || nucleic acid metabolic process || transcription elongation from RNA polymerase II promoter || nucleobase-containing compound biosynthetic process || transcription, DNA-dependent |
| Biological Process (BP) |
regulation of biosynthetic process |
6.846e-10 |
0.9914 |
Moderately Informative |
DIRECT |
| Biological Process (BP) |
gene expression |
6.852e-07 |
0.8729 |
Moderately Informative |
DIRECT |
| Biological Process (BP) |
RNA metabolic process |
1.697e-07 |
1.086 |
Moderately Informative |
DIRECT |
| Biological Process (BP) |
heterocycle biosynthetic process |
9.17e-07 |
0.9355 |
Moderately Informative |
DIRECT |
| Biological Process (BP) |
aromatic compound biosynthetic process |
8.291e-07 |
0.9747 |
Moderately Informative |
DIRECT |
| Biological Process (BP) |
regulation of cellular metabolic process |
1.574e-07 |
0.7905 |
Moderately Informative |
DIRECT |
| Biological Process (BP) |
cellular macromolecule biosynthetic process |
1.214e-06 |
0.9136 |
Moderately Informative |
DIRECT |
| Biological Process (BP) |
cellular nitrogen compound biosynthetic process |
1.19e-06 |
0.9136 |
Moderately Informative |
DIRECT |
| Biological Process (BP) |
regulation of nitrogen compound metabolic process |
0.0005318 |
0.9914 |
Moderately Informative |
DIRECT |
| Biological Process (BP) |
organic cyclic compound biosynthetic process |
6.956e-07 |
0.8928 |
Moderately Informative |
DIRECT |
| Biological Process (BP) |
regulation of gene expression |
0.01681 |
0.9914 |
Moderately Informative |
INHERITED FROM: regulation of transcription from RNA polymerase II promoter |
| Biological Process (BP) |
transcription, DNA-dependent |
5.11e-09 |
1.62 |
Informative |
DIRECT |
| Biological Process (BP) |
regulation of transcription from RNA polymerase II promoter |
0.0001097 |
1.745 |
Informative |
DIRECT |
| Biological Process (BP) |
cellular membrane organization |
6.879e-05 |
1.523 |
Informative |
DIRECT |
| Biological Process (BP) |
vesicle-mediated transport |
0.008645 |
1.495 |
Informative |
INHERITED FROM: phagocytosis || endocytosis || phagocytosis, engulfment |
| Biological Process (BP) |
transcription from RNA polymerase II promoter |
4.008e-15 |
1.921 |
Highly Informative |
DIRECT |
| Biological Process (BP) |
phagocytosis |
5.278e-07 |
2 |
Highly Informative |
DIRECT |
| Molecular Function (MF) |
protein binding transcription factor activity |
6.339e-10 |
1.9 |
-- |
DIRECT |
| Molecular Function (MF) |
RNA polymerase II transcription factor binding transcription factor activity |
5.676e-13 |
2.377 |
-- |
DIRECT |
| Molecular Function (MF) |
RNA polymerase II transcription cofactor activity |
8.95e-15 |
2.377 |
-- |
DIRECT |
| Molecular Function (MF) |
transcription cofactor activity |
5.787e-08 |
2.201 |
-- |
DIRECT |
| Molecular Function (MF) |
phosphatase binding |
2.178e-06 |
2.377 |
-- |
DIRECT |
| Molecular Function (MF) |
protein phosphatase binding |
2.434e-11 |
2.377 |
-- |
DIRECT |
| Molecular Function (MF) |
molecular_function |
1 |
0 |
-- |
INHERITED FROM: RNA polymerase II transcription cofactor activity || protein phosphatase 1 binding || phosphatase binding || enzyme binding || protein binding transcription factor activity || RNA polymerase II transcription factor binding transcription factor activity || transcription cofactor activity || protein phosphatase binding |
| Molecular Function (MF) |
binding |
0.6664 |
0.3952 |
Least Informative |
INHERITED FROM: phosphatase binding || protein phosphatase 1 binding || enzyme binding || protein phosphatase binding |
| Molecular Function (MF) |
protein binding |
0.2196 |
0.77 |
Moderately Informative |
INHERITED FROM: phosphatase binding || protein phosphatase 1 binding || enzyme binding || protein phosphatase binding |
| Molecular Function (MF) |
enzyme binding |
1.108e-05 |
1.679 |
Informative |
DIRECT |
| Molecular Function (MF) |
transcription factor binding transcription factor activity |
1 |
2.076 |
Highly Informative |
INHERITED FROM: RNA polymerase II transcription factor binding transcription factor activity || RNA polymerase II transcription cofactor activity || transcription cofactor activity |
| Cellular Component (CC) |
intracellular |
5.494e-07 |
0.1266 |
-- |
DIRECT |
| Cellular Component (CC) |
cell |
0.0005586 |
0.08068 |
-- |
DIRECT |
| Cellular Component (CC) |
nucleus |
2.059e-07 |
0.7857 |
-- |
DIRECT |
| Cellular Component (CC) |
nucleoplasm |
5.012e-05 |
1.337 |
-- |
DIRECT |
| Cellular Component (CC) |
mediator complex |
1.207e-14 |
2.542 |
-- |
DIRECT |
| Cellular Component (CC) |
membrane-enclosed lumen |
2.099e-11 |
0.9395 |
-- |
DIRECT |
| Cellular Component (CC) |
nuclear lumen |
6.528e-14 |
1.161 |
-- |
DIRECT |
| Cellular Component (CC) |
macromolecular complex |
8.46e-06 |
0.4276 |
-- |
DIRECT |
| Cellular Component (CC) |
organelle |
1.029e-08 |
0.1836 |
-- |
DIRECT |
| Cellular Component (CC) |
intracellular organelle |
0.0006062 |
0.1875 |
-- |
DIRECT |
| Cellular Component (CC) |
organelle lumen |
8.617e-05 |
1.023 |
-- |
DIRECT |
| Cellular Component (CC) |
organelle part |
1.056e-08 |
0.3713 |
-- |
DIRECT |
| Cellular Component (CC) |
intracellular part |
4.576e-07 |
0.1266 |
-- |
DIRECT |
| Cellular Component (CC) |
cell part |
0.0005527 |
0.08068 |
-- |
DIRECT |
| Cellular Component (CC) |
cellular_component |
0.02491 |
0 |
-- |
INHERITED FROM: intracellular organelle lumen || cell || protein serine/threonine phosphatase complex || macromolecular complex || nuclear part || organelle part || PTW/PP1 phosphatase complex || intracellular organelle || chromosome || nucleoplasm || cell part || organelle lumen || nuclear lumen || intracellular organelle part || membrane-enclosed lumen || intracellular part || mediator complex || intracellular || chromatin || organelle || nucleus |
| Cellular Component (CC) |
membrane-bounded organelle |
0.5077 |
0.2912 |
-- |
INHERITED FROM: nucleoplasm || nuclear lumen || nuclear part || mediator complex || nucleus |
| Cellular Component (CC) |
non-membrane-bounded organelle |
0.3272 |
0.6225 |
-- |
INHERITED FROM: chromatin || chromosome |
| Cellular Component (CC) |
chromosomal part |
0.004333 |
1.587 |
-- |
INHERITED FROM: chromatin |
| Cellular Component (CC) |
intracellular organelle part |
4.069e-05 |
0.3893 |
Least Informative |
DIRECT |
| Cellular Component (CC) |
protein complex |
0.043 |
0.5639 |
Least Informative |
INHERITED FROM: protein serine/threonine phosphatase complex || PTW/PP1 phosphatase complex || mediator complex |
| Cellular Component (CC) |
intracellular membrane-bounded organelle |
0.4936 |
0.2961 |
Least Informative |
INHERITED FROM: nucleoplasm || nuclear lumen || nuclear part || mediator complex || nucleus |
| Cellular Component (CC) |
intracellular non-membrane-bounded organelle |
0.3319 |
0.6225 |
Least Informative |
INHERITED FROM: chromatin || chromosome |
| Cellular Component (CC) |
nuclear part |
0.0005058 |
0.9505 |
Moderately Informative |
DIRECT |
| Cellular Component (CC) |
intracellular organelle lumen |
0.0001488 |
1.023 |
Moderately Informative |
DIRECT |
| Cellular Component (CC) |
chromosome |
0.0005638 |
1.462 |
Informative |
DIRECT |
| Cellular Component (CC) |
nucleoplasm part |
0.008018 |
1.337 |
Informative |
INHERITED FROM: mediator complex |
| Cellular Component (CC) |
chromatin |
7.402e-09 |
2.064 |
Highly Informative |
DIRECT |
| Cellular Component (CC) |
protein serine/threonine phosphatase complex |
2.481e-10 |
1.94 |
Highly Informative |
DIRECT |
0
10811649
