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Surface presentation of antigens (SPOA) superfamily
SCOP classification
Superfamily statistics
Functional annotation
| General category | Processes_IC |
| Detailed category | Transport |
Document: Function annotation of SCOP domain superfamilies
Gene Ontology (high-coverage) (show details)
Highlighted in gray are those with either FDR_singleton>0.001 or FDR_all>0.001
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GO term |
FDR (all) |
IC level |
SDFO level |
Annotation (direct or inherited) |
| Biological Process (BP) |
ciliary or flagellar motility |
0 |
2.699 |
-- |
DIRECT |
| Biological Process (BP) |
cell motility |
4.528e-10 |
1.585 |
-- |
DIRECT |
| Biological Process (BP) |
biological_process |
1 |
0 |
-- |
INHERITED FROM: localization of cell || ciliary or flagellar motility || localization || cellular component movement || cell motility || locomotion |
| Biological Process (BP) |
single-organism process |
0.5095 |
0.3316 |
-- |
INHERITED FROM: ciliary or flagellar motility || cellular component movement || cell motility |
| Biological Process (BP) |
cellular process |
0.7396 |
0.1415 |
-- |
INHERITED FROM: ciliary or flagellar motility || cellular component movement || cell motility |
| Biological Process (BP) |
localization |
0.0009856 |
0.6946 |
Least Informative |
DIRECT |
| Biological Process (BP) |
single-organism cellular process |
0.2123 |
0.3915 |
Least Informative |
INHERITED FROM: cellular component movement || cell motility || ciliary or flagellar motility |
| Biological Process (BP) |
localization of cell |
4.646e-10 |
1.585 |
Informative |
DIRECT |
| Biological Process (BP) |
cellular component movement |
4.985e-09 |
1.398 |
Informative |
DIRECT |
| Biological Process (BP) |
locomotion |
3.281e-08 |
1.444 |
Informative |
DIRECT |
| Molecular Function (MF) |
motor activity |
6.513e-11 |
2.679 |
-- |
DIRECT |
| Molecular Function (MF) |
pyrophosphatase activity |
2.264e-05 |
1.298 |
-- |
DIRECT |
| Molecular Function (MF) |
hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides |
2.3e-05 |
1.281 |
-- |
DIRECT |
| Molecular Function (MF) |
hydrolase activity, acting on acid anhydrides |
2.319e-05 |
1.281 |
-- |
DIRECT |
| Molecular Function (MF) |
catalytic activity |
0.5331 |
0.2686 |
-- |
INHERITED FROM: hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides || nucleoside-triphosphatase activity || pyrophosphatase activity || hydrolase activity, acting on acid anhydrides || motor activity |
| Molecular Function (MF) |
molecular_function |
0.1247 |
0 |
-- |
INHERITED FROM: hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides || pyrophosphatase activity || nucleoside-triphosphatase activity || hydrolase activity, acting on acid anhydrides || motor activity |
| Molecular Function (MF) |
hydrolase activity |
0.008006 |
0.6657 |
Least Informative |
INHERITED FROM: hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides || pyrophosphatase activity || motor activity || nucleoside-triphosphatase activity || hydrolase activity, acting on acid anhydrides |
| Molecular Function (MF) |
nucleoside-triphosphatase activity |
1.556e-05 |
1.502 |
Informative |
DIRECT |
| Cellular Component (CC) |
bacterial-type flagellum |
0 |
2.241 |
-- |
DIRECT |
| Cellular Component (CC) |
non-membrane-bounded organelle |
9.96e-05 |
0.6225 |
-- |
DIRECT |
| Cellular Component (CC) |
intracellular organelle |
0.2422 |
0.1875 |
-- |
INHERITED FROM: bacterial-type flagellum part || bacterial-type flagellum basal body || intracellular non-membrane-bounded organelle || bacterial-type flagellum |
| Cellular Component (CC) |
intracellular part |
0.542 |
0.1266 |
-- |
INHERITED FROM: bacterial-type flagellum part || bacterial-type flagellum basal body || intracellular non-membrane-bounded organelle || bacterial-type flagellum |
| Cellular Component (CC) |
intracellular |
0.5523 |
0.1266 |
-- |
INHERITED FROM: bacterial-type flagellum part || bacterial-type flagellum basal body || intracellular non-membrane-bounded organelle || bacterial-type flagellum |
| Cellular Component (CC) |
cell part |
0.8566 |
0.08068 |
-- |
INHERITED FROM: bacterial-type flagellum part || bacterial-type flagellum basal body || cell projection || cell projection part || intracellular non-membrane-bounded organelle || bacterial-type flagellum |
| Cellular Component (CC) |
cell |
0.8572 |
0.08068 |
-- |
INHERITED FROM: bacterial-type flagellum part || bacterial-type flagellum basal body || cell projection || cell projection part || intracellular non-membrane-bounded organelle || bacterial-type flagellum |
| Cellular Component (CC) |
cellular_component |
1 |
0 |
-- |
INHERITED FROM: bacterial-type flagellum part || bacterial-type flagellum basal body || cell projection || non-membrane-bounded organelle || cell projection part || intracellular non-membrane-bounded organelle || bacterial-type flagellum |
| Cellular Component (CC) |
organelle part |
0.0512 |
0.3713 |
-- |
INHERITED FROM: bacterial-type flagellum part || bacterial-type flagellum basal body |
| Cellular Component (CC) |
organelle |
0.2455 |
0.1836 |
-- |
INHERITED FROM: non-membrane-bounded organelle || bacterial-type flagellum part || bacterial-type flagellum basal body || intracellular non-membrane-bounded organelle || bacterial-type flagellum |
| Cellular Component (CC) |
intracellular non-membrane-bounded organelle |
9.941e-05 |
0.6225 |
Least Informative |
DIRECT |
| Cellular Component (CC) |
cell projection |
1.09e-05 |
1.079 |
Moderately Informative |
DIRECT |
| Cellular Component (CC) |
cell projection part |
6.3e-08 |
1.337 |
Informative |
DIRECT |
| Cellular Component (CC) |
bacterial-type flagellum part |
0 |
2.241 |
Highly Informative |
DIRECT |
Document: GO annotation of SCOP domains
UniProtKB KeyWords (KW) (show details)
Highlighted in gray are those with FDR_all>0.001
Document: KW annotation of SCOP domains
InterPro annotation
| Cross references | IPR001543 SSF101801 Protein matches |
| Abstract | Proteins in this group are involved in a secretory pathway responsible for the surface presentation of invasion plasmid antigen needed for the entry of Salmonella and other species into mammalian cells
[ 1447979], [8885278].They could play a role in preserving the translocation competence of the IPA antigens and are required for secretion of the three IPA proteins [1312536]. |
InterPro database
PDBeMotif information about ligands, sequence and structure motifs
PDBeMotif resource
Jump to [ Top of page · SCOP classification · InterPro annotation · PDBeMotif links · Functional annotation · Gene Ontology (high-coverage) · UniProtKB KeyWords (KW) ]
Internal database links
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Browse genome assignments for this superfamily. The SUPERFAMILY hidden Markov model library has been used to carry
out SCOP domain assignments to all genomes at the superfamily level.
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Alignments of sequences to 2 models
in this superfamily are available by clicking on the 'Alignments' icon above. PDB sequences less than 40% identical
are shown by default, but any other sequence(s) may be aligned. Select PDB sequences, genome sequences, or paste in or upload your own sequences.
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Browse and view proteins in genomes which have
different domain combinations including a Surface presentation of antigens (SPOA) domain.
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Examine the distribution of domain superfamilies, or families, across the major taxonomic kingdoms or genomes within a kingdom. This gives an immediate impression of how superfamilies, or families, are restricted to certain kingdoms of life.
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Explore domain occurrence network where nodes represent genomes and edges are domain architectures (shared between genomes) containing the superfamily of interest.
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There are 2 hidden Markov models representing the Surface presentation of antigens (SPOA) superfamily. Information on how the models are built, and plots showing hydrophobicity, match emmission probabilities and insertion/deletion probabilities can be inspected.
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Jump to [ Top of page · SCOP classification · InterPro annotation · PDBeMotif links · Functional annotation · Gene Ontology (high-coverage) · UniProtKB KeyWords (KW) · Internal database links ]
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