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Tlp20, baculovirus telokin-like protein superfamily
SCOP classification
Superfamily statistics
Functional annotation
| General category | Other |
| Detailed category | Viral proteins |
Document: Function annotation of SCOP domain superfamilies
InterPro annotation
| Cross references | IPR009092 SSF51289 Protein matches |
| Abstract | ACMNPV (Autographa californica nuclear polyhedrosis virus) telokin-like protein (TLP20) lies in a region of the baculoviral genome that is expressed late in the viral replication cycle, however its function is unknown. TLP20 was discovered using anti-telokin antibodies, telokin being the C-terminal domain of smooth-muscle myosin light-chain kinase [ 7517434]. Both TLP20 and telokin display a seven-stranded antiparallel beta-barrel structure, although the 3-dimensional structures of the beta-barrels are different and there is no sequence homology between the two. TLP20 is structurally similar to dUTPase in its fold and trimeric assembly.
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InterPro database
PDBeMotif information about ligands, sequence and structure motifs
PDBeMotif resource
Jump to [ Top of page · SCOP classification · InterPro annotation · PDBeMotif links · Functional annotation ]
Internal database links
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Browse genome assignments for this superfamily. The SUPERFAMILY hidden Markov model library has been used to carry
out SCOP domain assignments to all genomes at the superfamily level.
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Alignments of sequences to 1 models
in this superfamily are available by clicking on the 'Alignments' icon above. PDB sequences less than 40% identical
are shown by default, but any other sequence(s) may be aligned. Select PDB sequences, genome sequences, or paste in or upload your own sequences.
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Browse and view proteins in genomes which have
different domain combinations including a Tlp20, baculovirus telokin-like protein domain.
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Examine the distribution of domain superfamilies, or families, across the major taxonomic kingdoms or genomes within a kingdom. This gives an immediate impression of how superfamilies, or families, are restricted to certain kingdoms of life.
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Explore domain occurrence network where nodes represent genomes and edges are domain architectures (shared between genomes) containing the superfamily of interest.
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There are 1 hidden Markov models representing the Tlp20, baculovirus telokin-like protein superfamily. Information on how the models are built, and plots showing hydrophobicity, match emmission probabilities and insertion/deletion probabilities can be inspected.
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Jump to [ Top of page · SCOP classification · InterPro annotation · PDBeMotif links · Functional annotation · Internal database links ]
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