|
GO term |
FDR (all) |
IC level |
SDFO level |
Annotation (direct or inherited) |
| Biological Process (BP) |
RNA biosynthetic process |
0 |
1.62 |
-- |
DIRECT |
| Biological Process (BP) |
nucleobase-containing compound biosynthetic process |
7.487e-14 |
1.167 |
-- |
DIRECT |
| Biological Process (BP) |
macromolecule biosynthetic process |
9.196e-11 |
0.8861 |
-- |
DIRECT |
| Biological Process (BP) |
nucleic acid metabolic process |
4.898e-09 |
0.9066 |
-- |
DIRECT |
| Biological Process (BP) |
nucleobase-containing compound metabolic process |
7.257e-08 |
0.7305 |
-- |
DIRECT |
| Biological Process (BP) |
cellular biosynthetic process |
9.084e-08 |
0.5498 |
-- |
DIRECT |
| Biological Process (BP) |
organic substance biosynthetic process |
1.309e-07 |
0.5376 |
-- |
DIRECT |
| Biological Process (BP) |
regulation of RNA biosynthetic process |
4.016e-07 |
1.167 |
-- |
DIRECT |
| Biological Process (BP) |
cellular nitrogen compound metabolic process |
4.565e-07 |
0.585 |
-- |
DIRECT |
| Biological Process (BP) |
regulation of RNA metabolic process |
5.601e-07 |
1.131 |
-- |
DIRECT |
| Biological Process (BP) |
DNA-dependent transcription, initiation |
6.352e-07 |
2.699 |
-- |
DIRECT |
| Biological Process (BP) |
regulation of macromolecule biosynthetic process |
1.081e-06 |
1.066 |
-- |
DIRECT |
| Biological Process (BP) |
regulation of cellular biosynthetic process |
1.694e-06 |
1.009 |
-- |
DIRECT |
| Biological Process (BP) |
regulation of nucleobase-containing compound metabolic process |
2.103e-06 |
1.027 |
-- |
DIRECT |
| Biological Process (BP) |
transcription initiation from RNA polymerase II promoter |
2.792e-06 |
2.699 |
-- |
DIRECT |
| Biological Process (BP) |
regulation of macromolecule metabolic process |
1.82e-05 |
0.7959 |
-- |
DIRECT |
| Biological Process (BP) |
regulation of primary metabolic process |
2.051e-05 |
0.7852 |
-- |
DIRECT |
| Biological Process (BP) |
macromolecule metabolic process |
5.238e-05 |
0.4634 |
-- |
DIRECT |
| Biological Process (BP) |
positive regulation of cellular metabolic process |
0.0003909 |
1.208 |
-- |
DIRECT |
| Biological Process (BP) |
positive regulation of nucleobase-containing compound metabolic process |
0.00042 |
1.585 |
-- |
DIRECT |
| Biological Process (BP) |
positive regulation of RNA metabolic process |
0.0004952 |
1.658 |
-- |
DIRECT |
| Biological Process (BP) |
positive regulation of biosynthetic process |
0.0008947 |
1.495 |
-- |
DIRECT |
| Biological Process (BP) |
primary metabolic process |
0.0009177 |
0.2976 |
-- |
DIRECT |
| Biological Process (BP) |
positive regulation of biological process |
0.001083 |
0.8182 |
-- |
INHERITED FROM: positive regulation of RNA metabolic process || positive regulation of nucleobase-containing compound metabolic process || positive regulation of nitrogen compound metabolic process || positive regulation of biosynthetic process || positive regulation of cellular process || positive regulation of macromolecule biosynthetic process || positive regulation of metabolic process || positive regulation of cellular metabolic process |
| Biological Process (BP) |
positive regulation of macromolecule metabolic process |
0.001997 |
1.301 |
-- |
INHERITED FROM: positive regulation of RNA metabolic process || positive regulation of macromolecule biosynthetic process |
| Biological Process (BP) |
regulation of biological process |
0.008916 |
0.4486 |
-- |
INHERITED FROM: positive regulation of nucleobase-containing compound metabolic process || regulation of primary metabolic process || regulation of nucleobase-containing compound metabolic process || regulation of RNA metabolic process || regulation of RNA biosynthetic process || positive regulation of metabolic process || positive regulation of biosynthetic process || regulation of macromolecule biosynthetic process || regulation of metabolic process || regulation of cellular metabolic process || positive regulation of cellular metabolic process || positive regulation of cellular process || positive regulation of RNA metabolic process || regulation of nitrogen compound metabolic process || positive regulation of nitrogen compound metabolic process || positive regulation of macromolecule biosynthetic process || regulation of biosynthetic process || regulation of transcription from RNA polymerase II promoter || regulation of cellular biosynthetic process || regulation of macromolecule metabolic process |
| Biological Process (BP) |
biological regulation |
0.04458 |
0.4202 |
-- |
INHERITED FROM: positive regulation of nucleobase-containing compound metabolic process || regulation of primary metabolic process || regulation of nucleobase-containing compound metabolic process || regulation of RNA metabolic process || regulation of RNA biosynthetic process || positive regulation of metabolic process || positive regulation of biosynthetic process || regulation of macromolecule biosynthetic process || regulation of metabolic process || regulation of cellular metabolic process || positive regulation of cellular metabolic process || positive regulation of cellular process || positive regulation of RNA metabolic process || regulation of nitrogen compound metabolic process || positive regulation of nitrogen compound metabolic process || positive regulation of macromolecule biosynthetic process || regulation of biosynthetic process || regulation of transcription from RNA polymerase II promoter || regulation of cellular biosynthetic process || regulation of macromolecule metabolic process |
| Biological Process (BP) |
biological_process |
0.03978 |
0 |
-- |
INHERITED FROM: positive regulation of nucleobase-containing compound metabolic process || regulation of primary metabolic process || regulation of nucleobase-containing compound metabolic process || primary metabolic process || regulation of RNA biosynthetic process || positive regulation of metabolic process || transcription, DNA-dependent || gene expression || aromatic compound biosynthetic process || nucleobase-containing compound metabolic process || RNA metabolic process || heterocycle biosynthetic process || positive regulation of cellular metabolic process || cellular macromolecule biosynthetic process || positive regulation of cellular process || RNA biosynthetic process || regulation of nitrogen compound metabolic process || organic cyclic compound metabolic process || cellular macromolecule metabolic process || positive regulation of macromolecule biosynthetic process || cellular nitrogen compound metabolic process || cellular biosynthetic process || regulation of transcription from RNA polymerase II promoter || regulation of cellular biosynthetic process || nucleic acid metabolic process || regulation of macromolecule metabolic process || macromolecule biosynthetic process || regulation of RNA metabolic process || organic substance biosynthetic process || nucleobase-containing compound biosynthetic process || positive regulation of biosynthetic process || regulation of macromolecule biosynthetic process || nitrogen compound metabolic process || regulation of metabolic process || regulation of cellular metabolic process || transcription initiation from RNA polymerase II promoter || cellular nitrogen compound biosynthetic process || organic cyclic compound biosynthetic process || macromolecule metabolic process || heterocycle metabolic process || biosynthetic process || positive regulation of RNA metabolic process || DNA-dependent transcription, initiation || positive regulation of nitrogen compound metabolic process || regulation of biosynthetic process || cellular aromatic compound metabolic process || transcription from RNA polymerase II promoter |
| Biological Process (BP) |
metabolic process |
0.0128 |
0.2411 |
-- |
INHERITED FROM: cellular nitrogen compound biosynthetic process || cellular macromolecule biosynthetic process || primary metabolic process || RNA biosynthetic process || macromolecule biosynthetic process || organic substance biosynthetic process || organic cyclic compound biosynthetic process || macromolecule metabolic process || heterocycle metabolic process || biosynthetic process || nucleobase-containing compound biosynthetic process || transcription, DNA-dependent || DNA-dependent transcription, initiation || gene expression || aromatic compound biosynthetic process || organic cyclic compound metabolic process || cellular macromolecule metabolic process || nucleobase-containing compound metabolic process || RNA metabolic process || cellular nitrogen compound metabolic process || nitrogen compound metabolic process || heterocycle biosynthetic process || cellular aromatic compound metabolic process || cellular biosynthetic process || transcription from RNA polymerase II promoter || nucleic acid metabolic process || transcription initiation from RNA polymerase II promoter |
| Biological Process (BP) |
cellular metabolic process |
0.002778 |
0.2708 |
-- |
INHERITED FROM: cellular nitrogen compound biosynthetic process || cellular macromolecule biosynthetic process || RNA biosynthetic process || heterocycle metabolic process || nucleobase-containing compound biosynthetic process || transcription, DNA-dependent || DNA-dependent transcription, initiation || aromatic compound biosynthetic process || cellular macromolecule metabolic process || nucleobase-containing compound metabolic process || RNA metabolic process || cellular nitrogen compound metabolic process || heterocycle biosynthetic process || cellular aromatic compound metabolic process || cellular biosynthetic process || transcription from RNA polymerase II promoter || nucleic acid metabolic process || transcription initiation from RNA polymerase II promoter |
| Biological Process (BP) |
cellular process |
0.1563 |
0.1415 |
-- |
INHERITED FROM: nucleobase-containing compound biosynthetic process || transcription, DNA-dependent || aromatic compound biosynthetic process || nucleobase-containing compound metabolic process || RNA metabolic process || heterocycle biosynthetic process || transcription initiation from RNA polymerase II promoter || cellular nitrogen compound biosynthetic process || cellular macromolecule biosynthetic process || RNA biosynthetic process || heterocycle metabolic process || DNA-dependent transcription, initiation || cellular macromolecule metabolic process || cellular nitrogen compound metabolic process || cellular aromatic compound metabolic process || cellular biosynthetic process || transcription from RNA polymerase II promoter || nucleic acid metabolic process |
| Biological Process (BP) |
organic substance metabolic process |
0.001963 |
0.2676 |
-- |
INHERITED FROM: cellular macromolecule biosynthetic process || RNA biosynthetic process || macromolecule biosynthetic process || organic substance biosynthetic process || organic cyclic compound biosynthetic process || macromolecule metabolic process || nucleobase-containing compound biosynthetic process || transcription, DNA-dependent || DNA-dependent transcription, initiation || gene expression || organic cyclic compound metabolic process || cellular macromolecule metabolic process || nucleobase-containing compound metabolic process || RNA metabolic process || transcription from RNA polymerase II promoter || nucleic acid metabolic process || transcription initiation from RNA polymerase II promoter |
| Biological Process (BP) |
regulation of transcription, DNA-dependent |
0.5463 |
1.237 |
-- |
INHERITED FROM: regulation of transcription from RNA polymerase II promoter |
| Biological Process (BP) |
regulation of cellular macromolecule biosynthetic process |
1 |
1.119 |
-- |
INHERITED FROM: regulation of transcription from RNA polymerase II promoter |
| Biological Process (BP) |
biosynthetic process |
2.121e-07 |
0.52 |
Least Informative |
DIRECT |
| Biological Process (BP) |
heterocycle metabolic process |
2.716e-07 |
0.6308 |
Least Informative |
DIRECT |
| Biological Process (BP) |
cellular aromatic compound metabolic process |
3.557e-07 |
0.6271 |
Least Informative |
DIRECT |
| Biological Process (BP) |
organic cyclic compound metabolic process |
7.533e-07 |
0.5817 |
Least Informative |
DIRECT |
| Biological Process (BP) |
nitrogen compound metabolic process |
2.224e-06 |
0.5171 |
Least Informative |
DIRECT |
| Biological Process (BP) |
cellular macromolecule metabolic process |
1.914e-05 |
0.4976 |
Least Informative |
DIRECT |
| Biological Process (BP) |
regulation of metabolic process |
7.202e-05 |
0.6946 |
Least Informative |
DIRECT |
| Biological Process (BP) |
regulation of cellular process |
0.004232 |
0.5317 |
Least Informative |
INHERITED FROM: positive regulation of nucleobase-containing compound metabolic process || regulation of nucleobase-containing compound metabolic process || positive regulation of cellular process || regulation of RNA metabolic process || regulation of RNA biosynthetic process || positive regulation of RNA metabolic process || regulation of transcription from RNA polymerase II promoter || regulation of cellular metabolic process || regulation of cellular biosynthetic process || positive regulation of cellular metabolic process |
| Biological Process (BP) |
heterocycle biosynthetic process |
2.588e-12 |
0.9355 |
Moderately Informative |
DIRECT |
| Biological Process (BP) |
aromatic compound biosynthetic process |
2.807e-12 |
0.9747 |
Moderately Informative |
DIRECT |
| Biological Process (BP) |
cellular nitrogen compound biosynthetic process |
4.068e-12 |
0.9136 |
Moderately Informative |
DIRECT |
| Biological Process (BP) |
organic cyclic compound biosynthetic process |
1.562e-11 |
0.8928 |
Moderately Informative |
DIRECT |
| Biological Process (BP) |
RNA metabolic process |
4.885e-11 |
1.086 |
Moderately Informative |
DIRECT |
| Biological Process (BP) |
cellular macromolecule biosynthetic process |
5.026e-11 |
0.9136 |
Moderately Informative |
DIRECT |
| Biological Process (BP) |
gene expression |
1.685e-10 |
0.8729 |
Moderately Informative |
DIRECT |
| Biological Process (BP) |
regulation of biosynthetic process |
1.807e-06 |
0.9914 |
Moderately Informative |
DIRECT |
| Biological Process (BP) |
regulation of nitrogen compound metabolic process |
2.503e-06 |
0.9914 |
Moderately Informative |
DIRECT |
| Biological Process (BP) |
regulation of cellular metabolic process |
2.312e-05 |
0.7905 |
Moderately Informative |
DIRECT |
| Biological Process (BP) |
positive regulation of metabolic process |
0.0001971 |
1.167 |
Moderately Informative |
DIRECT |
| Biological Process (BP) |
positive regulation of cellular process |
0.0007368 |
0.9066 |
Moderately Informative |
DIRECT |
| Biological Process (BP) |
regulation of gene expression |
0.6153 |
0.9914 |
Moderately Informative |
INHERITED FROM: regulation of transcription from RNA polymerase II promoter |
| Biological Process (BP) |
transcription, DNA-dependent |
0 |
1.62 |
Informative |
DIRECT |
| Biological Process (BP) |
regulation of transcription from RNA polymerase II promoter |
4.667e-07 |
1.745 |
Informative |
DIRECT |
| Biological Process (BP) |
positive regulation of nitrogen compound metabolic process |
0.0004204 |
1.523 |
Informative |
DIRECT |
| Biological Process (BP) |
positive regulation of macromolecule biosynthetic process |
0.0006002 |
1.585 |
Informative |
DIRECT |
| Biological Process (BP) |
transcription from RNA polymerase II promoter |
0 |
1.921 |
Highly Informative |
DIRECT |
| Molecular Function (MF) |
protein binding transcription factor activity |
3.493e-08 |
1.9 |
-- |
DIRECT |
| Molecular Function (MF) |
molecular_function |
0.448 |
0 |
-- |
INHERITED FROM: protein binding transcription factor activity |
| Cellular Component (CC) |
DNA-directed RNA polymerase II, holoenzyme |
0 |
1.843 |
-- |
DIRECT |
| Cellular Component (CC) |
RNA polymerase complex |
0 |
1.587 |
-- |
DIRECT |
| Cellular Component (CC) |
nuclear DNA-directed RNA polymerase complex |
4.647e-12 |
1.638 |
-- |
DIRECT |
| Cellular Component (CC) |
nucleoplasm |
4.677e-11 |
1.337 |
-- |
DIRECT |
| Cellular Component (CC) |
nuclear lumen |
2.731e-08 |
1.161 |
-- |
DIRECT |
| Cellular Component (CC) |
organelle lumen |
1.113e-07 |
1.023 |
-- |
DIRECT |
| Cellular Component (CC) |
membrane-enclosed lumen |
1.315e-07 |
0.9395 |
-- |
DIRECT |
| Cellular Component (CC) |
macromolecular complex |
0.000112 |
0.4276 |
-- |
DIRECT |
| Cellular Component (CC) |
organelle part |
0.0001776 |
0.3713 |
-- |
DIRECT |
| Cellular Component (CC) |
cellular_component |
0.7806 |
0 |
-- |
INHERITED FROM: intracellular organelle lumen || nuclear DNA-directed RNA polymerase complex || macromolecular complex || transcription factor TFIIF complex || nuclear part || organelle part || transcription factor complex || protein complex || nucleoplasm || organelle lumen || nuclear lumen || DNA-directed RNA polymerase II, holoenzyme || intracellular organelle part || DNA-directed RNA polymerase complex || membrane-enclosed lumen || nucleoplasm part || RNA polymerase complex |
| Cellular Component (CC) |
cell part |
0.1785 |
0.08068 |
-- |
INHERITED FROM: intracellular organelle lumen || nuclear DNA-directed RNA polymerase complex || transcription factor TFIIF complex || nuclear part || transcription factor complex || nucleoplasm || nuclear lumen || DNA-directed RNA polymerase II, holoenzyme || intracellular organelle part || DNA-directed RNA polymerase complex || nucleoplasm part || RNA polymerase complex |
| Cellular Component (CC) |
cell |
0.1789 |
0.08068 |
-- |
INHERITED FROM: intracellular organelle lumen || nuclear DNA-directed RNA polymerase complex || transcription factor TFIIF complex || nuclear part || transcription factor complex || nucleoplasm || nuclear lumen || DNA-directed RNA polymerase II, holoenzyme || intracellular organelle part || DNA-directed RNA polymerase complex || nucleoplasm part || RNA polymerase complex |
| Cellular Component (CC) |
intracellular organelle |
0.01183 |
0.1875 |
-- |
INHERITED FROM: nucleoplasm || intracellular organelle lumen || nuclear DNA-directed RNA polymerase complex || nuclear lumen || DNA-directed RNA polymerase II, holoenzyme || intracellular organelle part || transcription factor TFIIF complex || nuclear part || transcription factor complex || nucleoplasm part |
| Cellular Component (CC) |
intracellular part |
0.05724 |
0.1266 |
-- |
INHERITED FROM: nucleoplasm || intracellular organelle lumen || nuclear DNA-directed RNA polymerase complex || nuclear lumen || DNA-directed RNA polymerase II, holoenzyme || intracellular organelle part || transcription factor TFIIF complex || DNA-directed RNA polymerase complex || nuclear part || transcription factor complex || nucleoplasm part || RNA polymerase complex |
| Cellular Component (CC) |
intracellular |
0.05965 |
0.1266 |
-- |
INHERITED FROM: nucleoplasm || intracellular organelle lumen || nuclear DNA-directed RNA polymerase complex || nuclear lumen || DNA-directed RNA polymerase II, holoenzyme || intracellular organelle part || transcription factor TFIIF complex || DNA-directed RNA polymerase complex || nuclear part || transcription factor complex || nucleoplasm part || RNA polymerase complex |
| Cellular Component (CC) |
organelle |
0.01214 |
0.1836 |
-- |
INHERITED FROM: nucleoplasm || intracellular organelle lumen || organelle lumen || nuclear DNA-directed RNA polymerase complex || nuclear lumen || DNA-directed RNA polymerase II, holoenzyme || intracellular organelle part || transcription factor TFIIF complex || nuclear part || organelle part || transcription factor complex || nucleoplasm part |
| Cellular Component (CC) |
membrane-bounded organelle |
0.004592 |
0.2912 |
-- |
INHERITED FROM: nucleoplasm || nuclear DNA-directed RNA polymerase complex || nuclear lumen || DNA-directed RNA polymerase II, holoenzyme || transcription factor TFIIF complex || nuclear part || transcription factor complex || nucleoplasm part |
| Cellular Component (CC) |
nucleus |
0.007332 |
0.7857 |
-- |
INHERITED FROM: nucleoplasm || DNA-directed RNA polymerase II, holoenzyme || transcription factor TFIIF complex || nuclear part || nucleoplasm part || nuclear DNA-directed RNA polymerase complex || nuclear lumen || transcription factor complex |
| Cellular Component (CC) |
protein complex |
2.541e-05 |
0.5639 |
Least Informative |
DIRECT |
| Cellular Component (CC) |
intracellular organelle part |
0.0002231 |
0.3893 |
Least Informative |
DIRECT |
| Cellular Component (CC) |
intracellular membrane-bounded organelle |
0.004478 |
0.2961 |
Least Informative |
INHERITED FROM: nucleoplasm || nuclear DNA-directed RNA polymerase complex || nuclear lumen || DNA-directed RNA polymerase II, holoenzyme || transcription factor TFIIF complex || nuclear part || transcription factor complex || nucleoplasm part |
| Cellular Component (CC) |
intracellular organelle lumen |
1.049e-07 |
1.023 |
Moderately Informative |
DIRECT |
| Cellular Component (CC) |
nuclear part |
1.902e-07 |
0.9505 |
Moderately Informative |
DIRECT |
| Cellular Component (CC) |
DNA-directed RNA polymerase complex |
0 |
1.587 |
Informative |
DIRECT |
| Cellular Component (CC) |
nucleoplasm part |
5.808e-05 |
1.337 |
Informative |
DIRECT |
| Cellular Component (CC) |
transcription factor complex |
3.199e-14 |
2.241 |
Highly Informative |
DIRECT |
0
11183778
