SUPERFAMILY 1.75 HMM library and genome assignments server


MAST3 pre-PK domain-like superfamily

SCOP classification
Root:   SCOP hierarchy in SUPERFAMILY [ 0] (11)
Class:   All alpha proteins [ 46456] (284)
Fold:   Bromodomain-like [ 47363] (15)
Superfamily:   MAST3 pre-PK domain-like [ 140482]
Families:   MAST3 pre-PK domain-like [ 140483]


Superfamily statistics
Genomes (122) Uniprot 2013_05 PDB chains (SCOP 1.75)
Domains 390 373 1
Proteins 389 371 1


Functional annotation
General category Regulation
Detailed category Kinases/phosphatases

Document:
Function annotation of SCOP domain superfamilies

Gene Ontology (high-coverage)

(show details)
GO term FDR (all) SDFO level Annotation (direct or inherited)
Biological Process (BP) protein metabolic process 0.0006927 Least Informative Direct
Biological Process (BP) cellular macromolecule metabolic process 0.00812 Least Informative Inherited
Biological Process (BP) cellular protein modification process 3.063e-05 Moderately Informative Direct
Biological Process (BP) phosphate-containing compound metabolic process 5.753e-05 Moderately Informative Direct
Biological Process (BP) phosphorylation 1.113e-07 Informative Direct
Biological Process (BP) protein phosphorylation 1.734e-08 Highly Informative Direct
Molecular Function (MF) binding 0.01205 Least Informative Inherited
Molecular Function (MF) transferase activity, transferring phosphorus-containing groups 1.024e-10 Moderately Informative Direct
Molecular Function (MF) cation binding 7.977e-06 Moderately Informative Direct
Molecular Function (MF) anion binding 1.906e-05 Moderately Informative Direct
Molecular Function (MF) phosphotransferase activity, alcohol group as acceptor 6.528e-12 Informative Direct
Molecular Function (MF) kinase activity 1.956e-11 Informative Direct
Molecular Function (MF) magnesium ion binding 3.762e-10 Informative Direct
Molecular Function (MF) purine ribonucleoside triphosphate binding 1.158e-07 Informative Direct
Molecular Function (MF) purine ribonucleoside binding 1.599e-07 Informative Direct
Molecular Function (MF) nucleotide binding 1.275e-06 Informative Direct
Molecular Function (MF) cytoskeletal protein binding 2.07e-05 Informative Direct
Molecular Function (MF) protein kinase activity 3.531e-13 Highly Informative Direct
Molecular Function (MF) tubulin binding 1.658e-09 Highly Informative Direct
Molecular Function (MF) ATP binding 1.201e-08 Highly Informative Direct
Cellular Component (CC) intracellular non-membrane-bounded organelle 0.004834 Least Informative Inherited
Cellular Component (CC) cytoskeleton 8.581e-05 Moderately Informative Direct
Cellular Component (CC) microtubule cytoskeleton 3.671e-06 Informative Direct

Document: GO annotation of SCOP domains

Enzyme Commission (EC)

(show details)
EC termFDR (all)SDEO levelAnnotation (direct or inherited)
Enzyme Commission (EC)Protein-serine/threonine kinases0Moderately InformativeDirect

Document: EC annotation of SCOP domains

Enzyme Commission (EC)

(show details)
EC termFDR (all)SDEC levelAnnotation (direct or inherited)
Enzyme Commission (EC)Transferring phosphorous-containing groups0Least InformativeDirect
Enzyme Commission (EC)Protein-serine/threonine kinases0Moderately InformativeDirect
Enzyme Commission (EC)Non-specific serine/threonine protein kinase0InformativeDirect

Document: EC annotation of SCOP domains

UniProtKB KeyWords (KW)

(show details)
KW termFDR (all)SDKW levelAnnotation (direct or inherited)
Cellular componentCytoplasm0.005436Least InformativeInherited
Cellular componentCytoskeleton4.355e-08Moderately InformativeDirect
Molecular functionNucleotide-binding0Least InformativeDirect
Molecular functionMagnesium0Moderately InformativeDirect
Post-translational modificationTransferase0Least InformativeDirect
Post-translational modificationKinase0Moderately InformativeDirect
Post-translational modificationSerine/threonine-protein kinase0InformativeDirect

Document: KW annotation of SCOP domains

Jump to [ Top of page · SCOP classification · Functional annotation · Gene Ontology (high-coverage) · Enzyme Commission (EC) · Enzyme Commission (EC) · UniProtKB KeyWords (KW) ]

Internal database links

Browse genome assignments for this superfamily. The SUPERFAMILY hidden Markov model library has been used to carry out SCOP domain assignments to all genomes at the superfamily level.


Alignments of sequences to 1 models in this superfamily are available by clicking on the 'Alignments' icon above. PDB sequences less than 40% identical are shown by default, but any other sequence(s) may be aligned. Select PDB sequences, genome sequences, or paste in or upload your own sequences.


Browse and view proteins in genomes which have different domain combinations including a MAST3 pre-PK domain-like domain.


Examine the distribution of domain superfamilies, or families, across the major taxonomic kingdoms or genomes within a kingdom. This gives an immediate impression of how superfamilies, or families, are restricted to certain kingdoms of life.


Explore domain occurrence network where nodes represent genomes and edges are domain architectures (shared between genomes) containing the superfamily of interest.

There are 1 hidden Markov models representing the MAST3 pre-PK domain-like superfamily. Information on how the models are built, and plots showing hydrophobicity, match emmission probabilities and insertion/deletion probabilities can be inspected.


Jump to [ Top of page · SCOP classification · Functional annotation · Gene Ontology (high-coverage) · Enzyme Commission (EC) · Enzyme Commission (EC) · UniProtKB KeyWords (KW) · Internal database links ]