SUPERFAMILY 1.75 HMM library and genome assignments server

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MAST3 pre-PK domain-like superfamily

SCOP classification
Root:   SCOP hierarchy in SUPERFAMILY [ 0] (11)
Class:   All alpha proteins [ 46456] (284)
Fold:   Bromodomain-like [ 47363] (15)
Superfamily:   MAST3 pre-PK domain-like [ 140482]
Families:   MAST3 pre-PK domain-like [ 140483]


Superfamily statistics
Genomes (136) Uniprot 2014_06 PDB chains (SCOP 1.75)
Domains 424 440 1
Proteins 423 438 1


Functional annotation
General category Regulation
Detailed category Kinases/phosphatases

Document:
Function annotation of SCOP domain superfamilies

Gene Ontology (high-coverage)

(show details)
GO term FDR (all) SDFO level Annotation (direct or inherited)
Biological Process (BP) protein metabolic process 0.0165 Least Informative Inherited
Biological Process (BP) cellular macromolecule metabolic process 0.08475 Least Informative Inherited
Biological Process (BP) phosphate-containing compound metabolic process 0.002815 Moderately Informative Inherited
Biological Process (BP) cellular protein modification process 0.001753 Moderately Informative Inherited
Biological Process (BP) phosphorylation 0.00002964 Informative Direct
Biological Process (BP) protein phosphorylation 0.000007707 Highly Informative Direct
Molecular Function (MF) transferase activity 0.000006604 Least Informative Direct
Molecular Function (MF) binding 0.01282 Least Informative Inherited
Molecular Function (MF) transferase activity, transferring phosphorus-containing groups 0.00000005218 Moderately Informative Direct
Molecular Function (MF) cation binding 0.000009923 Moderately Informative Direct
Molecular Function (MF) anion binding 0.00002131 Moderately Informative Direct
Molecular Function (MF) magnesium ion binding 0.000000001143 Informative Direct
Molecular Function (MF) phosphotransferase activity, alcohol group as acceptor 0.000000005404 Informative Direct
Molecular Function (MF) kinase activity 0.00000001338 Informative Direct
Molecular Function (MF) purine ribonucleoside triphosphate binding 0.0000001333 Informative Direct
Molecular Function (MF) purine ribonucleoside binding 0.0000001821 Informative Direct
Molecular Function (MF) nucleotide binding 0.000001452 Informative Direct
Molecular Function (MF) cytoskeletal protein binding 0.00002301 Informative Direct
Molecular Function (MF) protein kinase activity 0.0000000005244 Highly Informative Direct
Molecular Function (MF) tubulin binding 0.000000001649 Highly Informative Direct
Molecular Function (MF) ATP binding 0.0000000142 Highly Informative Direct
Cellular Component (CC) intracellular non-membrane-bounded organelle 0.01014 Least Informative Inherited
Cellular Component (CC) cytoskeleton 0.0001259 Moderately Informative Direct
Cellular Component (CC) microtubule cytoskeleton 0.000005244 Informative Direct

Document: GO annotation of SCOP domains

Enzyme Commission (EC)

(show details)
EC termFDR (all)SDEO levelAnnotation (direct or inherited)
Enzyme Commission (EC)Protein-serine/threonine kinases0Moderately InformativeDirect

Document: EC annotation of SCOP domains

Enzyme Commission (EC)

(show details)
EC termFDR (all)SDEC levelAnnotation (direct or inherited)
Enzyme Commission (EC)Transferring phosphorous-containing groups0Least InformativeDirect
Enzyme Commission (EC)Protein-serine/threonine kinases0Moderately InformativeDirect
Enzyme Commission (EC)Non-specific serine/threonine protein kinase0InformativeDirect

Document: EC annotation of SCOP domains

UniProtKB KeyWords (KW)

(show details)
KW termFDR (all)SDKW levelAnnotation (direct or inherited)
Cellular componentCytoplasm0.005641Least InformativeInherited
Cellular componentCytoskeleton0.00000004477Moderately InformativeDirect
Molecular functionNucleotide-binding0Least InformativeDirect
Molecular functionATP-binding0Moderately InformativeDirect
Molecular functionMagnesium0Moderately InformativeDirect
Post-translational modificationTransferase0Least InformativeDirect
Post-translational modificationKinase0Moderately InformativeDirect
Post-translational modificationSerine/threonine-protein kinase0InformativeDirect

Document: KW annotation of SCOP domains

Jump to [ Top of page · SCOP classification · Functional annotation · Gene Ontology (high-coverage) · Enzyme Commission (EC) · Enzyme Commission (EC) · UniProtKB KeyWords (KW) ]

Internal database links

Browse genome assignments for this superfamily. The SUPERFAMILY hidden Markov model library has been used to carry out SCOP domain assignments to all genomes at the superfamily level.


Alignments of sequences to 1 models in this superfamily are available by clicking on the 'Alignments' icon above. PDB sequences less than 40% identical are shown by default, but any other sequence(s) may be aligned. Select PDB sequences, genome sequences, or paste in or upload your own sequences.


Browse and view proteins in genomes which have different domain combinations including a MAST3 pre-PK domain-like domain.


Examine the distribution of domain superfamilies, or families, across the major taxonomic kingdoms or genomes within a kingdom. This gives an immediate impression of how superfamilies, or families, are restricted to certain kingdoms of life.


Explore domain occurrence network where nodes represent genomes and edges are domain architectures (shared between genomes) containing the superfamily of interest.

There are 1 hidden Markov models representing the MAST3 pre-PK domain-like superfamily. Information on how the models are built, and plots showing hydrophobicity, match emmission probabilities and insertion/deletion probabilities can be inspected.


Jump to [ Top of page · SCOP classification · Functional annotation · Gene Ontology (high-coverage) · Enzyme Commission (EC) · Enzyme Commission (EC) · UniProtKB KeyWords (KW) · Internal database links ]