SUPERFAMILY 1.75 HMM library and genome assignments server

Yeast Phenotype (YP): morphology

(show info)

Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Root: YP Hierarchy (yeast phenotype from Ascomycete phenotype ontology)

Shortest distance to current term (+ for parents, - for children) YP term [YP ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ 1:   observable [APO:0000017] <7>
0:   morphology [APO:0000049] <2>(25|22) (25|5|0)
- 1:   cellular morphology [APO:0000050] <6>(19|17) (19|4|0)
- 1:   culture appearance [APO:0000158] <3>(6|2) (6|1|0)


Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Superfamily

(show details)
SCOP termFDR (all)Annotation (direct or inherited)
N-terminal domain of alpha and beta subunits of F1 ATP synthase0Direct
PriA/YqbF domain0Direct
Ribosomal protein L130Direct
C-terminal domain of alpha and beta subunits of F1 ATP synthase0Direct
Nop domain0Direct
S13-like H2TH domain0Direct
GINS helical bundle-like0Direct
FtsH protease domain-like0Direct
F1F0 ATP synthase subunit C0Direct
Cdc48 domain 2-like0Direct
Cap-Gly domain0Direct
Prefoldin0.0005734Direct
P-loop containing nucleoside triphosphate hydrolases0.001007Inherited
SAICAR synthase-like0.00642Inherited
Smc hinge domain0.02016Inherited
PH domain-like0.02278Inherited
Class II aaRS ABD-related0.02287Inherited
N-terminal nucleophile aminohydrolases (Ntn hydrolases)0.03782Inherited
Cyclin-like0.03886Inherited
Thiolase-like0.06479Inherited
SH3-domain0.08801Inherited
Nucleotide-diphospho-sugar transferases0.2482Inherited
PP2C-like0.2926Inherited
Acid proteases0.3772Inherited
Sm-like ribonucleoproteins0.5161Inherited


Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Family

(show details)
SCOP termFDR (all)Annotation (direct or inherited)
Ribosomal protein L130Direct
N-terminal domain of alpha and beta subunits of F1 ATP synthase0Direct
Ribosomal protein S130Direct
SWIRM domain0Direct
Cdc48 domain 2-like0Direct
C-terminal domain of alpha and beta subunits of F1 ATP synthase0Direct
RNB domain-like0Direct
Cap-Gly domain0Direct
FtsH protease domain-like0Direct
Nop domain0Direct
Proteasome subunits0.0005407Direct
G proteins0.0006908Direct
Prefoldin0.005535Inherited
Smc hinge domain0.01711Inherited
FYVE, a phosphatidylinositol-3-phosphate binding domain0.05637Inherited
Actin/HSP700.06333Inherited
Cyclin0.06604Inherited
SH3-domain0.08613Inherited
GHMP Kinase, N-terminal domain0.1162Inherited
Pepsin-like0.1911Inherited
PP2C-like0.2746Inherited
Tyrosine-dependent oxidoreductases0.6481Inherited


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
Plot tree as:   Download Newick format tree:
(show help)

Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

(show details)
Supra-domain (Single) FDR (all) Annotation (direct or inherited)
F1F0 ATP synthase subunit C0Direct
Cdc48 domain 2-like0Direct
N-terminal domain of alpha and beta subunits of F1 ATP synthase0Direct
S13-like H2TH domain0Direct
Nop domain0Direct
PriA/YqbF domain0Direct
Cap-Gly domain0Direct
FtsH protease domain-like0Direct
GINS helical bundle-like0Direct
Ribosomal protein L130Direct
C-terminal domain of alpha and beta subunits of F1 ATP synthase0Direct
Prefoldin0.0004929Direct
P-loop containing nucleoside triphosphate hydrolases0.0008693Direct
SAICAR synthase-like0.005625Inherited
Smc hinge domain0.01806Inherited
PH domain-like0.02042Inherited
Class II aaRS ABD-related0.02052Inherited
N-terminal nucleophile aminohydrolases (Ntn hydrolases)0.03418Inherited
Cyclin-like0.03519Inherited
Thiolase-like0.05944Inherited
SH3-domain0.08131Inherited
Nucleotide-diphospho-sugar transferases0.236Inherited
PP2C-like0.2798Inherited
Acid proteases0.3648Inherited
Sm-like ribonucleoproteins0.5043Inherited

(show details)
Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
52540,47917
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 47917 - C-terminal domain of alpha and beta subunits of F1 ATP synthase
  • 0Direct
    52540,140990
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 140990 - FtsH protease domain-like
  • 0Direct
    47954,47954
  • 47954 - Cyclin-like
  • 47954 - Cyclin-like
  • 0.03937Inherited
    48452,48452
  • 48452 - TPR-like
  • 48452 - TPR-like
  • 0.04658Inherited
    52540,50447
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 50447 - Translation proteins
  • 0.06621Inherited


    Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
    Plot tree as:   Download Newick format tree:
    (show help)