SUPERFAMILY 1.75 HMM library and genome assignments server

Yeast Phenotype (YP): development

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Root: YP Hierarchy (yeast phenotype from Ascomycete phenotype ontology)

Shortest distance to current term (+ for parents, - for children) YP term [YP ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ 1:   observable [APO:0000017] <7>
0:   development [APO:0000023] <8>(13|17) (13|4|0)
- 1:   sexual cycle [APO:0000031] <5>(1|3) (1|0|0)
- 1:   filamentous growth [APO:0000027] <4>(0|0) (0|0|0)
- 1:   budding [APO:0000024] <2>(3|2) (3|1|0)
- 1:   formation of anatomical structure [APO:0000291] <2>(0|0) (0|0|0)
- 1:   lifespan [APO:0000030] <2>(7|8) (7|2|0)
- 1:   conidiation [APO:0000295] <1>(0|0) (0|0|0)
- 1:   chlamydospore formation [APO:0000319](0|0) (0|0|0)
- 1:   phenotypic switching [APO:0000321](0|0) (0|0|0)


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Superfamily

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SCOP termFDR (all)Annotation (direct or inherited)
Ribosomal protein S80Direct
N-terminal domain of alpha and beta subunits of F1 ATP synthase0Direct
AMPKBI-like0Direct
C-terminal domain of alpha and beta subunits of F1 ATP synthase0Direct
FtsH protease domain-like0Direct
F1F0 ATP synthase subunit C0Direct
Regulator of G-protein signaling, RGS0Direct
DNA-binding domain of Mlu1-box binding protein MBP10Direct
Bromodomain0.001763Inherited
Cyclin-like0.004288Inherited
Ubiquitin-like0.01367Inherited
Histone-fold0.1342Inherited
P-loop containing nucleoside triphosphate hydrolases0.9656Inherited


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Family

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SCOP termFDR (all)Annotation (direct or inherited)
Vacuolar sorting protein domain0Direct
N-terminal domain of alpha and beta subunits of F1 ATP synthase0Direct
Ribosomal protein S80Direct
RecA protein-like (ATPase-domain)0Direct
DJ-1/PfpI0Direct
Trehalose-6-phosphate synthase, OtsA0Direct
AMPKBI-like0Direct
DNA-binding domain of Mlu1-box binding protein MBP10Direct
C-terminal domain of alpha and beta subunits of F1 ATP synthase0Direct
Regulator of G-protein signaling, RGS0Direct
FtsH protease domain-like0Direct
BCR-homology GTPase activation domain (BH-domain)0.0002719Direct
Homeodomain0.0007453Direct
Bromodomain0.001737Inherited
Cyclin0.002696Inherited
Nucleosome core histones0.01334Inherited
Inositol polyphosphate 5-phosphatase (IPP5)0.03481Inherited


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

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Supra-domain (Single) FDR (all) Annotation (direct or inherited)
F1F0 ATP synthase subunit C0Direct
N-terminal domain of alpha and beta subunits of F1 ATP synthase0Direct
Regulator of G-protein signaling, RGS0Direct
AMPKBI-like0Direct
Ribosomal protein S80Direct
DNA-binding domain of Mlu1-box binding protein MBP10Direct
FtsH protease domain-like0Direct
C-terminal domain of alpha and beta subunits of F1 ATP synthase0Direct
Bromodomain0.001527Inherited
Cyclin-like0.003736Inherited
Ubiquitin-like0.0122Inherited
Histone-fold0.1252Inherited
P-loop containing nucleoside triphosphate hydrolases0.96Inherited

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Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
52540,47917
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 47917 - C-terminal domain of alpha and beta subunits of F1 ATP synthase
  • 0Direct
    53756,56784
  • 53756 - UDP-Glycosyltransferase/glycogen phosphorylase
  • 56784 - HAD-like
  • 0Direct
    52540,140990
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 140990 - FtsH protease domain-like
  • 0Direct
    47954,47954
  • 47954 - Cyclin-like
  • 47954 - Cyclin-like
  • 0.029Inherited


    Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
    Plot tree as:   Download Newick format tree:
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