SUPERFAMILY 1.75 HMM library and genome assignments server

Xenopus ANatomical entity (XAN): anatomical space

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Root: XA Hierarchy (Xenopus anatomy and development from Xenbase frog anatomy ontology)

Shortest distance to current term (+ for parents, - for children) XA term [XA ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + 2:   anatomical structure [XAO:0003000] <14>(473|579) (473|263|86)
+ 1:   Xenopus anatomical entity [XAO:0000000] <9>
+ 1:   whole organism [XAO:0003004] <15>(473|579) (473|263|86)
0:   anatomical space [XAO:0003190] <21>(12|12) (12|6|2)
- 1:   archenteron [XAO:0000092] <3>(1|2) (1|1|0)
- 1:   blastocoel [XAO:0000294] <2>(1|0) (1|0|0)
- 1:   mouth [XAO:0003029] <2>(1|1) (1|0|0)
- 1:   coelom [XAO:0004521] <1>(9|10) (9|5|2)
- 1:   filter chamber [XAO:0000439] <1>(0|0) (0|0|0)
- 1:   choana [XAO:0000277](0|0) (0|0|0)
- 1:   dorsal lymph space [XAO:0000374](0|0) (0|0|0)
- 1:   fenestra basicranialis [XAO:0004365](0|0) (0|0|0)
- 1:   fenestra subocularis [XAO:0004367](0|0) (0|0|0)
- 1:   fourth ventricle [XAO:0003099](0|0) (0|0|0)
- 1:   medium cavity [XAO:0004525](0|0) (0|0|0)
- 1:   mesonephric sinus [XAO:0000381](0|0) (0|0|0)
- 1:   myocoelic slit [XAO:0000246](0|0) (0|0|0)
- 1:   neurocoel [XAO:0000252](0|0) (0|0|0)
- 1:   nostril [XAO:0003033](0|0) (0|0|0)
- 1:   olfactory pit [XAO:0000275](0|0) (0|0|0)
- 1:   oral cavity [XAO:0000126](0|0) (0|0|0)
- 1:   pharyngeal cavity [XAO:0000105](0|0) (0|0|0)
- 1:   principal cavity [XAO:0004526](0|0) (0|0|0)
- 1:   pronephric sinus [XAO:0000385](0|0) (0|0|0)
- 1:   pupil [XAO:0000283](0|0) (0|0|0)


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Superfamily

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SCOP termFDR (all)Annotation (direct or inherited)
Homeodomain-like0.000000002065Direct
Frizzled cysteine-rich domain0.0000004438Direct
HLH, helix-loop-helix DNA-binding domain0.000001047Direct
RNA-binding domain, RBD0.00009225Direct
Aldolase0.0002821Direct
Alkaline phosphatase-like0.0007348Direct
Growth factor receptor domain0.0008226Direct
Cadherin-like0.001296Inherited
Glucocorticoid receptor-like (DNA-binding domain)0.019Inherited
lambda repressor-like DNA-binding domains0.02304Inherited
Thioredoxin-like0.1289Inherited
BAR/IMD domain-like0.52Inherited


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Family

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SCOP termFDR (all)Annotation (direct or inherited)
Erythroid transcription factor GATA-10Direct
Homeodomain0.000000007655Direct
Frizzled cysteine-rich domain0.0000004809Direct
HLH, helix-loop-helix DNA-binding domain0.000001502Direct
Canonical RBD0.0000733Direct
Class I aldolase0.0001052Direct
Glutathione peroxidase-like0.0001342Direct
Paired domain0.0003725Direct
POU-specific domain0.004132Inherited
Forkhead DNA-binding domain0.005055Inherited
Cadherin0.005916Inherited
ets domain0.0283Inherited


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

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Supra-domain (Single) FDR (all) Annotation (direct or inherited)
Homeodomain-like0.000000001637Direct
Frizzled cysteine-rich domain0.0000003541Direct
HLH, helix-loop-helix DNA-binding domain0.0000008363Direct
RNA-binding domain, RBD0.0000747Direct
Aldolase0.0002299Direct
Alkaline phosphatase-like0.0006027Direct
Growth factor receptor domain0.0006754Direct
Cadherin-like0.001067Inherited
Glucocorticoid receptor-like (DNA-binding domain)0.01618Inherited
lambda repressor-like DNA-binding domains0.01971Inherited
Thioredoxin-like0.1157Inherited
BAR/IMD domain-like0.4944Inherited

(show details)
Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
50044,55550
  • 50044 - SH3-domain
  • 55550 - SH2 domain
  • 0.000005034Direct
    49785,57184
  • 49785 - Galactose-binding domain-like
  • 57184 - Growth factor receptor domain
  • 0.000342Direct
    57184,57184
  • 57184 - Growth factor receptor domain
  • 57184 - Growth factor receptor domain
  • 0.000342Direct
    57716,57716
  • 57716 - Glucocorticoid receptor-like (DNA-binding domain)
  • 57716 - Glucocorticoid receptor-like (DNA-binding domain)
  • 0.0004225Direct
    55550,56112
  • 55550 - SH2 domain
  • 56112 - Protein kinase-like (PK-like)
  • 0.0008989Direct
    49313,49313
  • 49313 - Cadherin-like
  • 49313 - Cadherin-like
  • 0.00511Inherited

    (show details)
    Supra-domain (Triple) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
    50044,55550,56112
  • 50044 - SH3-domain
  • 55550 - SH2 domain
  • 56112 - Protein kinase-like (PK-like)
  • 0.000005034Direct
    49313,49313,49313
  • 49313 - Cadherin-like
  • 49313 - Cadherin-like
  • 49313 - Cadherin-like
  • 0.003841Inherited


    Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
    Plot tree as:   Download Newick format tree:
    (show help)