SUPERFAMILY 1.75 HMM library and genome assignments server

Biological process: Biological process

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Root: KW Hierarchy (Keywords from UniProtKB)

Shortest distance to current term (+ for parents, - for children) KW term [KW ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
0:   Biological process [KW:9999] <255>
- 1:   Transport [KW:0813] <16>(289|392) (302|209|80)
- 1:   Host-virus interaction [KW:0945] <15>(94|113) (96|52|24)
- 1:   Amino-acid biosynthesis [KW:0028] <12>(88|119) (89|67|31)
- 1:   Virus exit from host cell [KW:1188] <9>(17|17) (17|12|9)
- 1:   Virus entry into host cell [KW:1160] <8>(51|57) (51|33|20)
- 1:   Carbohydrate metabolism [KW:0119] <7>(80|130) (81|58|16)
- 1:   Lipid metabolism [KW:0443] <6>(107|143) (108|69|25)
- 1:   Differentiation [KW:0221] <4>(96|113) (105|71|39)
- 1:   Sensory transduction [KW:0716] <3>(30|35) (34|19|9)
- 1:   Antibiotic biosynthesis [KW:0045] <2>(20|20) (20|13|8)
- 1:   Antibiotic resistance [KW:0046] <2>(38|42) (42|22|7)
- 1:   Cell cycle [KW:0131] <2>(103|137) (114|72|22)
- 1:   Immunity [KW:0391] <2>(66|81) (69|58|29)
- 1:   mRNA processing [KW:0507] <2>(62|70) (66|45|19)
- 1:   Chlorophyll biosynthesis [KW:0149] <1>(13|16) (14|4|1)
- 1:   Cytolysis [KW:0204] <1>(25|22) (25|8|2)
- 1:   DNA damage [KW:0227] <1>(80|130) (82|69|40)
- 1:   Hemostasis [KW:0356] <1>(23|18) (23|19|14)
- 1:   Plant defense [KW:0611] <1>(29|33) (31|14|3)
- 1:   Purine biosynthesis [KW:0658] <1>(25|28) (25|20|12)
- 1:   Sporulation [KW:0749] <1>(26|22) (27|9|3)
- 1:   Transcription [KW:0804] <1>(186|300) (202|184|85)
- 1:   Viral latency [KW:1251] <1>(0|0) (0|0|0)
- 1:   Viral transcription [KW:1195] <1>(0|0) (0|0|0)
- 1:   Virulence [KW:0843] <1>(67|70) (70|32|16)
- 1:   ATP synthesis [KW:0066](15|15) (15|6|1)
- 1:   Abscisic acid biosynthesis [KW:0937](8|8) (8|5|4)
- 1:   Abscisic acid signaling pathway [KW:0938](5|4) (5|0|0)
- 1:   Acetoin biosynthesis [KW:0005](1|1) (1|0|0)
- 1:   Acetoin catabolism [KW:0006](1|1) (1|0|0)
- 1:   Acute phase [KW:0011](12|12) (12|11|11)
- 1:   Alginate biosynthesis [KW:0016](5|4) (6|4|3)
- 1:   Alkaloid metabolism [KW:0017](6|4) (6|1|0)
- 1:   Alkylphosphonate uptake [KW:0019](0|0) (0|0|0)
- 1:   Angiogenesis [KW:0037](42|49) (43|34|24)
- 1:   Antiviral defense [KW:0051](20|22) (21|13|4)
- 1:   Apoptosis [KW:0053](78|92) (82|42|14)
- 1:   Archaeal flagellum biogenesis [KW:1209](0|0) (0|0|0)
- 1:   Arginine metabolism [KW:0056](9|11) (9|1|0)
- 1:   Aromatic hydrocarbons catabolism [KW:0058](28|36) (28|14|2)
- 1:   Arsenical resistance [KW:0059](3|4) (3|0|0)
- 1:   Ascorbate biosynthesis [KW:0060](4|4) (4|0|0)
- 1:   Autoinducer synthesis [KW:0071](2|2) (2|0|0)
- 1:   Autophagy [KW:0072](22|24) (23|8|2)
- 1:   Auxin biosynthesis [KW:0073](9|7) (9|7|4)
- 1:   Auxin signaling pathway [KW:0927](8|6) (8|2|0)
- 1:   B-cell activation [KW:0075](3|3) (3|0|0)
- 1:   Bacterial flagellum biogenesis [KW:1005](7|7) (7|0|0)
- 1:   Bacteriocin immunity [KW:0079](2|1) (2|0|0)
- 1:   Behavior [KW:0085](2|3) (2|0|0)
- 1:   Biological rhythms [KW:0090](34|36) (36|15|1)
- 1:   Biomineralization [KW:0091](1|1) (1|0|0)
- 1:   Biotin biosynthesis [KW:0093](5|4) (5|2|0)
- 1:   Branched-chain amino acid catabolism [KW:0101](6|8) (6|4|1)
- 1:   Brassinosteroid signaling pathway [KW:1070](1|1) (1|0|0)
- 1:   Cadmium resistance [KW:0105](5|4) (5|1|0)
- 1:   Calvin cycle [KW:0113](6|15) (6|2|0)
- 1:   Cap snatching [KW:1157](1|1) (1|0|0)
- 1:   Capsule biogenesis/degradation [KW:0972](4|5) (4|2|1)
- 1:   Carbon dioxide fixation [KW:0120](4|4) (4|1|0)
- 1:   Carnitine biosynthesis [KW:0124](1|0) (1|0|0)
- 1:   Carotenoid biosynthesis [KW:0125](3|2) (3|0|0)
- 1:   Catecholamine biosynthesis [KW:0127](5|5) (5|2|0)
- 1:   Catecholamine metabolism [KW:0128](3|4) (3|1|0)
- 1:   Cell adhesion [KW:0130](70|87) (71|88|73)
- 1:   Cell shape [KW:0133](28|30) (30|25|14)
- 1:   Cell wall biogenesis/degradation [KW:0961](40|59) (41|26|8)
- 1:   Cellulose biosynthesis [KW:0135](5|2) (5|1|1)
- 1:   Chemotaxis [KW:0145](26|30) (29|13|6)
- 1:   Chlorophyll catabolism [KW:0881](1|0) (1|0|0)
- 1:   Chondrogenesis [KW:0891](2|3) (2|0|0)
- 1:   Chromate resistance [KW:0155](0|0) (0|0|0)
- 1:   Chromosome partition [KW:0159](15|21) (16|8|0)
- 1:   Cilium biogenesis/degradation [KW:0970](17|11) (17|5|3)
- 1:   Citrate utilization [KW:0163](0|0) (0|0|0)
- 1:   Cobalamin biosynthesis [KW:0169](9|10) (9|4|1)
- 1:   Coenzyme A biosynthesis [KW:0173](6|8) (6|1|0)
- 1:   Coenzyme M biosynthesis [KW:0174](2|1) (2|0|0)
- 1:   Collagen degradation [KW:0177](6|7) (6|5|4)
- 1:   Competence [KW:0178](1|2) (1|0|0)
- 1:   Conjugation [KW:0184](9|7) (9|3|0)
- 1:   Cytadherence [KW:0200](0|0) (0|0|0)
- 1:   Cytochrome c-type biogenesis [KW:0201](4|5) (5|0|0)
- 1:   Cytokinin biosynthesis [KW:0203](2|1) (2|0|0)
- 1:   Cytokinin signaling pathway [KW:0932](4|4) (4|1|0)
- 1:   Cytosine metabolism [KW:0205](0|0) (0|0|0)
- 1:   DNA condensation [KW:0226](8|8) (8|3|1)
- 1:   DNA excision [KW:0228](9|9) (9|3|1)
- 1:   DNA integration [KW:0229](15|16) (15|15|12)
- 1:   DNA recombination [KW:0233](39|57) (39|38|24)
- 1:   DNA replication [KW:0235](47|70) (50|45|26)
- 1:   DNA synthesis [KW:0237](12|11) (12|5|1)
- 1:   Deoxyribonucleotide synthesis [KW:0215](1|1) (1|0|0)
- 1:   Detoxification [KW:0216](13|10) (13|4|1)
- 1:   Diaminopimelate biosynthesis [KW:0220](8|9) (8|4|1)
- 1:   Digestion [KW:0222](4|4) (4|1|0)
- 1:   Endocytosis [KW:0254](44|53) (44|33|21)
- 1:   Enterobactin biosynthesis [KW:0259](2|1) (2|0|0)
- 1:   Erythrocyte maturation [KW:0265](2|1) (2|0|0)
- 1:   Ethylene biosynthesis [KW:0266](2|2) (2|0|0)
- 1:   Ethylene signaling pathway [KW:0936](8|7) (8|5|2)
- 1:   Exocytosis [KW:0268](19|20) (20|7|0)
- 1:   Exopolysaccharide synthesis [KW:0270](3|4) (3|0|0)
- 1:   Fertilization [KW:0278](15|14) (15|8|3)
- 1:   Fimbrium biogenesis [KW:1029](4|4) (4|1|0)
- 1:   Flagellar rotation [KW:0283](6|5) (6|2|0)
- 1:   Flavonoid biosynthesis [KW:0284](3|4) (3|1|0)
- 1:   Flight [KW:0286](0|0) (0|0|0)
- 1:   Flowering [KW:0287](6|4) (6|0|0)
- 1:   Folate biosynthesis [KW:0289](8|8) (8|3|0)
- 1:   Fruit ripening [KW:0292](3|3) (3|0|0)
- 1:   GPI-anchor biosynthesis [KW:0337](4|2) (4|0|0)
- 1:   Galactitol metabolism [KW:0298](1|2) (1|0|0)
- 1:   Gaseous exchange [KW:0305](3|2) (3|2|0)
- 1:   Gastrulation [KW:0306](5|5) (5|1|0)
- 1:   Germination [KW:0309](3|3) (3|1|0)
- 1:   Gibberellin signaling pathway [KW:0939](2|2) (2|1|0)
- 1:   Gluconate utilization [KW:0311](2|2) (2|1|0)
- 1:   Gluconeogenesis [KW:0312](14|15) (14|3|1)
- 1:   Glutathione biosynthesis [KW:0317](5|7) (5|3|0)
- 1:   Glycerol metabolism [KW:0319](9|6) (9|3|0)
- 1:   Glycogen biosynthesis [KW:0320](8|9) (10|6|2)
- 1:   Glycolate pathway [KW:0323](1|1) (1|0|0)
- 1:   Glycolysis [KW:0324](23|32) (23|15|6)
- 1:   Glyoxylate bypass [KW:0329](6|7) (6|2|0)
- 1:   Growth regulation [KW:0341](15|14) (15|5|0)
- 1:   Hearing [KW:1009](4|5) (4|2|1)
- 1:   Heme biosynthesis [KW:0350](11|11) (11|3|0)
- 1:   Hemolymph clotting [KW:0353](0|0) (0|0|0)
- 1:   Herbicide resistance [KW:0359](4|5) (4|2|1)
- 1:   Hibernation [KW:0909](0|0) (0|0|0)
- 1:   Histidine metabolism [KW:0369](8|8) (8|4|2)
- 1:   Hydrogen peroxide [KW:0376](6|10) (8|6|2)
- 1:   Hypersensitive response elicitation [KW:0928](1|1) (1|0|0)
- 1:   Hypusine biosynthesis [KW:0386](2|1) (2|0|0)
- 1:   Inflammatory response [KW:0395](29|32) (29|19|9)
- 1:   Inositol biosynthesis [KW:0398](2|2) (2|1|0)
- 1:   Insecticide resistance [KW:0978](0|0) (0|0|0)
- 1:   Interferon antiviral system evasion [KW:0922](6|8) (6|5|2)
- 1:   Intron homing [KW:0404](9|9) (9|11|5)
- 1:   Iron storage [KW:0409](2|2) (2|0|0)
- 1:   Isoprene biosynthesis [KW:0414](18|20) (18|11|2)
- 1:   Jasmonic acid signaling pathway [KW:1184](0|0) (0|0|0)
- 1:   Karyogamy [KW:0415](0|0) (0|0|0)
- 1:   Keratinization [KW:0417](4|3) (4|3|2)
- 1:   Lactation [KW:0421](6|6) (6|3|2)
- 1:   Lactose biosynthesis [KW:0422](1|1) (1|0|0)
- 1:   Lactose metabolism [KW:0423](4|3) (4|1|0)
- 1:   Leukotriene biosynthesis [KW:0434](4|4) (4|2|1)
- 1:   Lignin biosynthesis [KW:0438](4|5) (4|2|0)
- 1:   Lignin degradation [KW:0439](2|2) (2|1|1)
- 1:   Lipopolysaccharide biosynthesis [KW:0448](18|22) (19|7|3)
- 1:   Luminescence [KW:0455](8|8) (8|1|0)
- 1:   Maltose metabolism [KW:0462](3|2) (3|1|0)
- 1:   Mandelate pathway [KW:0463](0|0) (0|0|0)
- 1:   Mast cell degranulation [KW:0467](0|0) (0|0|0)
- 1:   Meiosis [KW:0469](34|33) (35|10|1)
- 1:   Melanin biosynthesis [KW:0470](4|4) (4|2|1)
- 1:   Melatonin biosynthesis [KW:0471](3|2) (3|1|0)
- 1:   Menaquinone biosynthesis [KW:0474](10|10) (10|4|1)
- 1:   Mercuric resistance [KW:0475](6|6) (6|2|0)
- 1:   Methanogenesis [KW:0484](18|17) (18|6|0)
- 1:   Methanol utilization [KW:0485](0|0) (0|0|0)
- 1:   Methotrexate resistance [KW:0487](1|1) (1|0|0)
- 1:   Mineral balance [KW:0495](0|0) (0|0|0)
- 1:   Molybdenum cofactor biosynthesis [KW:0501](12|12) (12|3|1)
- 1:   Myogenesis [KW:0517](8|5) (8|4|2)
- 1:   Necrosis [KW:1210](4|3) (4|1|0)
- 1:   Neurogenesis [KW:0524](54|59) (57|42|18)
- 1:   Neurotransmitter biosynthesis [KW:0530](4|4) (4|2|0)
- 1:   Neurotransmitter degradation [KW:0531](5|5) (5|1|0)
- 1:   Nickel insertion [KW:0996](3|2) (3|1|0)
- 1:   Nitrate assimilation [KW:0534](16|15) (16|10|5)
- 1:   Nitrogen fixation [KW:0535](31|30) (31|16|7)
- 1:   Nodulation [KW:0536](8|11) (8|3|2)
- 1:   Nonsense-mediated mRNA decay [KW:0866](11|12) (12|3|2)
- 1:   Notch signaling pathway [KW:0914](21|22) (22|16|13)
- 1:   Nucleotide biosynthesis [KW:0545](7|7) (7|4|0)
- 1:   Nucleotide metabolism [KW:0546](10|15) (11|7|5)
- 1:   Nylon degradation [KW:0549](0|0) (0|0|0)
- 1:   One-carbon metabolism [KW:0554](13|17) (13|9|4)
- 1:   Osteogenesis [KW:0892](13|12) (13|4|1)
- 1:   PHA biosynthesis [KW:0577](1|0) (1|0|0)
- 1:   PHB biosynthesis [KW:0583](3|2) (3|1|0)
- 1:   PQQ biosynthesis [KW:0884](4|4) (4|0|0)
- 1:   Pantothenate biosynthesis [KW:0566](4|5) (4|2|0)
- 1:   Pentose shunt [KW:0570](5|5) (5|2|0)
- 1:   Peptidoglycan synthesis [KW:0573](22|24) (25|16|4)
- 1:   Peroxisome biogenesis [KW:0962](4|4) (4|1|0)
- 1:   Phagocytosis [KW:0581](7|5) (7|1|0)
- 1:   Phenylalanine catabolism [KW:0585](9|9) (9|3|0)
- 1:   Phenylpropanoid metabolism [KW:0587](2|2) (2|0|0)
- 1:   Pheromone response [KW:0589](3|2) (3|0|0)
- 1:   Phosphotransferase system [KW:0598](11|12) (11|8|3)
- 1:   Photorespiration [KW:0601](4|4) (4|1|0)
- 1:   Photosynthesis [KW:0602](48|55) (49|5|1)
- 1:   Phytochrome signaling pathway [KW:0607](3|2) (3|0|0)
- 1:   Plasmid copy control [KW:0615](0|0) (0|0|0)
- 1:   Plasmid partition [KW:0616](0|0) (0|0|0)
- 1:   Plasminogen activation [KW:0617](4|4) (4|3|2)
- 1:   Polyamine biosynthesis [KW:0620](8|9) (8|1|0)
- 1:   Porphyrin biosynthesis [KW:0627](15|18) (15|7|2)
- 1:   Pregnancy [KW:0635](2|1) (2|0|0)
- 1:   Proline metabolism [KW:0642](2|2) (2|0|0)
- 1:   Protein biosynthesis [KW:0648](62|74) (65|67|38)
- 1:   Purine metabolism [KW:0659](16|15) (16|7|0)
- 1:   Purine salvage [KW:0660](6|6) (6|1|0)
- 1:   Putrescine biosynthesis [KW:0661](3|3) (3|0|0)
- 1:   Pyridine nucleotide biosynthesis [KW:0662](11|13) (11|5|1)
- 1:   Pyridoxine biosynthesis [KW:0664](7|9) (7|2|0)
- 1:   Pyrimidine biosynthesis [KW:0665](18|19) (18|12|8)
- 1:   Queuosine biosynthesis [KW:0671](6|5) (6|1|0)
- 1:   Quinate metabolism [KW:0672](3|3) (3|1|0)
- 1:   Quorum sensing [KW:0673](5|5) (5|1|0)
- 1:   RNA repair [KW:0692](4|5) (4|3|1)
- 1:   RNA-mediated gene silencing [KW:0943](20|18) (20|14|3)
- 1:   Restriction system [KW:0680](4|5) (4|2|0)
- 1:   Rhamnose metabolism [KW:0684](7|4) (7|4|2)
- 1:   Riboflavin biosynthesis [KW:0686](6|6) (6|3|0)
- 1:   Ribosome biogenesis [KW:0690](24|31) (29|13|0)
- 1:   Self-incompatibility [KW:0713](1|1) (1|0|0)
- 1:   Serotonin biosynthesis [KW:0724](2|2) (2|1|0)
- 1:   Spermidine biosynthesis [KW:0745](6|7) (6|2|0)
- 1:   Starch biosynthesis [KW:0750](6|5) (6|3|1)
- 1:   Steroidogenesis [KW:0755](4|4) (4|0|0)
- 1:   Stress response [KW:0346](45|57) (48|28|8)
- 1:   Sulfate respiration [KW:0763](1|1) (1|0|0)
- 1:   Syncytium formation induced by viral infection [KW:1180](0|0) (0|0|0)
- 1:   Taxol biosynthesis [KW:0876](1|1) (1|0|0)
- 1:   Teichoic acid biosynthesis [KW:0777](2|0) (2|0|0)
- 1:   Tellurium resistance [KW:0778](0|0) (0|0|0)
- 1:   Terminal addition [KW:0780](4|3) (4|3|2)
- 1:   Tetrahydrobiopterin biosynthesis [KW:0783](3|4) (3|0|0)
- 1:   Thiamine biosynthesis [KW:0784](13|13) (13|7|2)
- 1:   Thiamine catabolism [KW:0785](1|1) (1|0|0)
- 1:   Thyroid hormones biosynthesis [KW:0893](7|4) (7|2|0)
- 1:   Tissue remodeling [KW:0797](5|3) (5|3|3)
- 1:   Translation regulation [KW:0810](23|28) (26|12|5)
- 1:   Transposition [KW:0815](3|2) (3|1|0)
- 1:   Tricarboxylic acid cycle [KW:0816](23|25) (23|12|2)
- 1:   Tryptophan catabolism [KW:0823](4|5) (4|0|0)
- 1:   Two-component regulatory system [KW:0902](14|21) (15|29|20)
- 1:   Tyrosine catabolism [KW:0828](7|7) (7|2|0)
- 1:   Ubiquinone biosynthesis [KW:0831](7|5) (7|2|1)
- 1:   Ubl conjugation pathway [KW:0833](69|95) (74|89|21)
- 1:   Unfolded protein response [KW:0834](15|12) (15|5|2)
- 1:   Urea cycle [KW:0835](5|5) (5|1|0)
- 1:   Viral DNA replication [KW:1194](0|0) (0|0|0)
- 1:   Viral RNA replication [KW:0693](25|28) (25|22|13)
- 1:   Viral genome excision [KW:1250](0|0) (0|0|0)
- 1:   Wnt signaling pathway [KW:0879](39|39) (41|22|9)
- 1:   cAMP biosynthesis [KW:0115](3|3) (3|1|0)
- 1:   cGMP biosynthesis [KW:0141](4|4) (4|2|1)
- 1:   rRNA processing [KW:0698](23|42) (26|17|3)
- 1:   tRNA processing [KW:0819](45|67) (46|34|11)