SUPERFAMILY 1.75 HMM library and genome assignments server

Genome Names, Identifiers and Phylogenetic Trees

Create custom lists of genome identifiers or phylogenetic trees.

These lists of genomes can be used to plot phylogenetic trees on this page, or to compare genomes on other pages. Click on the sTOL logo on the right to browse GO terms distributed over the tree.

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Build a list of comma separated genome identifiers using the genome checkboxes and/or taxon links.

The values in the 'Code' column are the 2-letter genome identifiers used by the SUPERFAMILY database. Some of the identifiers have a relation to the species name, but many do not.

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Select Code Name Genus Family Order Class Phylum Kingdom Superkingdom
hsHomo sapiens 71_37
xpPan troglodytes 71_2.1.4
gxGorilla gorilla 71_3.1
ofPongo abelii 71_2
NlNomascus leucogenys 71_1.0
ruMacaca mulatta 71_1
CJCallithrix jacchus 71_3.2.1
obOtolemur garnettii 71_3
ioMicrocebus murinus 71_1
ihTarsius syrichta 71_1
rnRattus norvegicus 71_5.0
mmMus musculus 71_38
gbIctidomys tridecemlineatus 71_2
inDipodomys ordii 71_1
HgHeterocephalus glaber v1.7-2
guCavia porcellus 71_3
okOryctolagus cuniculus 71_2
oqOchotona princeps 71
tzTupaia belangeri 71
SSSus scrofa 71_10.2
bvBos taurus 71_3.1
vuVicugna pacos 71_1
utTursiops truncatus 71_1
MpfMustela putorius furo 71_1.0
PAAiluropoda melanoleuca 71_1
dgCanis familiaris 71_3.1
feFelis catus 71_6.2
eqEquus caballus 71_2
luMyotis lucifugus 71_2.0
vrPteropus vampyrus 71_1
xrSorex araneus 71_1
ekErinaceus europaeus 71
vnProcavia capensis 71_1
lkLoxodonta africana 71_3
eeEchinops telfairi 71
d5Dasypus novemcinctus 71_2
GGCholoepus hoffmanni 71_1
mrMacropus eugenii 71_1.0
TdSarcophilus harrisii 71_7.0
opMonodelphis domestica 71_5
ohOrnithorhynchus anatinus 71_5
SKSaccoglossus kowalevskii v3.0
PmPetromyzon marinus 71_7.0
LcLatimeria chalumnae 71_1
nkAnolis carolinensis 71_2.0
zfTaeniopygia guttata 71_3.2.4
MLMeleagris gallopavo 71_2
ggGallus gallus 71_4
PsiPelodiscus sinensis 71_1.0
xlXenopus laevis
xnXenopus tropicalis 71_4.2
daDanio rerio 71_9
CoGadus morhua 71_1
gcGasterosteus aculeatus 71_1
olOryzias latipes 71_1
XmXiphophorus maculatus 71_4.4.2
tnTetraodon nigroviridis 71_8
toTakifugu rubripes 71_4
OnOreochromis niloticus 71_1.0
bfBranchiostoma floridae 1.0
w1Oikopleura dioica
c0Ciona savignyi 71_2.0
isCiona intestinalis 71
tuStrongylocentrotus purpuratus v3.1
gyLottia gigantea
hxHelobdella robusta
i1Capitella sp. I
DpDanaus plexippus OGS1.0
HmHeliconius melpomene
HnHeliconius numata
omBombyx mori
nzNasonia vitripennis
aiApis mellifera 38.2d
zgHarpegnathos saltator v3.3
zlLinepithema humile v1.1
znSolenopsis invicta v.2.2.3
zjPogonomyrmex barbatus v1.2
AeAcromyrmex echinatior v3.8
zbAtta cephalotes v1.1
zdCamponotus floridanus v3.3
gdDrosophila grimshawi 1.3
gwDrosophila willistoni 1.3
doDrosophila pseudoobscura 2.13
dqDrosophila persimilis 1.3
dyDrosophila yakuba 1.3
dwDrosophila simulans 1.3
dzDrosophila sechellia 1.3
ddDrosophila melanogaster 71_5
geDrosophila erecta 1.3
dkDrosophila ananassae 1.3
duDrosophila virilis 1.2
dxDrosophila mojavensis 1.3
axAedes aegypti 55
ieCulex pipiens quinquefasciatus
agAnopheles gambiae 49_3j
tjTribolium castaneum 3.0
hvPediculus humanus corporis
qpAcyrthosiphon pisum
d7Daphnia pulex
TuTetranychus urticae
iiIxodes scapularis
wpPristionchus pacificus
MIMeloidogyne incognita
MhMeloidogyne hapla
r0Brugia malayi WS218
wjCaenorhabditis japonica
wnCaenorhabditis brenneri
wrCaenorhabditis remanei
clCaenorhabditis elegans 71_235
cwCaenorhabditis briggsae 2
HymHymenolepis microstoma
maaEchinococcus multilocularis
EcgEchinococcus granulosus
TsTaenia solium
hzSchistosoma mansoni
APAcropora digitifera v1.0
nwNematostella vectensis 1.0
qmHydra magnipapillata
z4Amphimedon queenslandica
rqTrichoplax adhaerens
PRProterospongia sp. ATCC 50818
ovMonosiga brevicollis
SASphaeroforma arctica JP610
wzCapsaspora owczarzaki ATCC 30864
gzMalassezia globosa CBS 7966
umUstilago maydis
qnWallemia sebi v1.0
mWgMixia osmundae IAM 14324 v1.0
OwfCronartium quercuum f. sp. fusiforme G11 v1.0
p4Puccinia graminis f. sp. tritici CRL 75-36-700-3
qlMelampsora laricis-populina
qbRhodotorula graminis WP1 v1.0
yuSporobolomyces roseus IAM 13481
iUFSphaerobolus stellatus v1.0
NX7Piloderma croceum F 1598 v1.0
SLSerpula lacrymans var. lacrymans S7.9
q1Coniophora puteana
dUPHydnomerulius pinastri v2.0
fu6Paxillus rubicundulus Ve08.2h10 v1.0
rAMPisolithus microcarpus 441 v1.0
i0vPisolithus tinctorius Marx 270 v1.0
KRsScleroderma citrinum Foug A v1.0
orCoprinopsis cinerea okayama7 130 v3
POPleurotus ostreatus
aIMAmanita thiersii Skay4041 v1.0
bU9Amanita muscaria Koide v1.0
GfCGalerina marginata v1.0
VL4Hebeloma cylindrosporum h7 v2.0
loLaccaria bicolor S238N-H82
ABAgaricus bisporus var. bisporus
zcSchizophyllum commune
qiStereum hirsutum FP-91666 SS1 v1.0
qaHeterobasidion annosum
q6Gloeophyllum trabeumv1.0
q9Punctularia strigosozonata v1.0
fcPhanerochaete chrysosporium RP-78 2.1
rXiSebacina vermifera MAFF 305830 v1.0
q4Fomitiporia mediterranea v1.0
1baTulasnella calospora AL13/4D v1.0
iaPostia placenta
qoWolfiporia cocos MD-104 SS10 v1.0
q5Fomitopsis pinicolav1.0
h5JFomitopsis pinicola FP-58527 SS1 v3.0
qjTrametes versicolor v1.0
q2Dichomitus squalens
lqTremella mesenterica
RxSDaldinia eschscholzii EC12 v1.0
grMagnaporthe grisea 70-15
MmmApiospora montagnei NRRL 25634 v1.0
nqPodospora anserina
STSporotrichum thermophile ATCC 42464
TTThielavia terrestris NRRL 8126
hgChaetomium globosum CBS 148.51
n4Neurospora tetrasperma
n3Neurospora discreta FGSC 8579
nsNeurospora crassa OR74A
yhCryphonectria parasitica
vdVerticillium dahliae VdLs.17
veVerticillium albo-atrum VaMs.102
q0Acremonium alcalophilumv 1.0
foFusarium oxysporum f. sp. lycopersici 4286
nxNectria haematococca mpVI
fvFusarium verticillioides 7600
fgFusarium graminearum
R0RTrichoderma asperellum CBS 433.97 v1.0
wtTrichoderma atroviride
3JuTrichoderma citrinoviride v1.0
reTrichoderma reesei 1.2
hfvTrichoderma longibrachiatum ATCC 18648 v1.0
njTrichoderma virens Gv29-8
6mXTrichoderma harzianum CBS 226.95 v1.0
EPtAmorphotheca resinae v1.0
b7Botrytis cinerea B05.10
lzSclerotinia sclerotiorum
FSZDidymella exigua CBS 183.55 v1.0
l3Alternaria brassicicola
qgSetosphaeria turcica v1.0
t4Pyrenophora tritici-repentis
txDCochliobolus miyabeanus ATCC 44560 v1.0
ztxCochliobolus victoriae FI3 v1.0
K5NCochliobolus lunatus m118 v2.0
4IZCochliobolus carbonum 26-R-13 v1.0
wcCochliobolus heterostrophus
ndStagonospora nodorum
yoMycosphaerella graminicola IPO323
PCoZasmidium cellare ATCC 36951 v1.0
ymMycosphaerella fijiensis CIRAD86
qeSeptoria musiva v1.0
q3Dothistroma septosporum
LLdAureobasidium pullulans var. subglaciale EXF-2481 v1.0
j2Ajellomyces dermatitidis SLH14081
hkHistoplasma capsulatum class NAmI strain WU24
qcMicrosporum canis CBS 113480
gpMicrosporum gypseum
ARArthroderma benhamiae CBS 112371
o7Trichophyton equinum CBS 127.97
TVTrichophyton verrucosum HKI 0517
TPTrichophyton tonsurans CBS 112818
TRTrichophyton rubrum CBS 118892
ivParacoccidioides brasiliensis Pb18
i6Coccidioides posadasii RMSCC 3488
imCoccidioides immitis RS
urUncinocarpus reesii 1704
nhNeosartorya fischeri NRRL 181
PCPenicillium chrysogenum Wisconsin 54-1255
qxCPenicillium chrysogenum v1.0
PMPenicillium marneffei ATCC 18224
vXEAspergillus acidus v1.0
aoAspergillus fumigatus Af293
qYvAspergillus brasiliensis v1.0
HlWAspergillus sydowii v1.0
GrQAspergillus versicolor v1.0
RcyAspergillus zonatus v1.0
ACAspergillus carbonarius ITEM 5010
giAspergillus terreus NIH2624
oVwAspergillus tubingensis v1.0
CUlAspergillus wentii v1.0
a8Aspergillus oryzae RIB40
a5Aspergillus niger ATCC 1015
gqAspergillus flavus NRRL3357
a7Aspergillus clavatus NRRL 1
KZpAspergillus glaucus v1.0
anAspergillus nidulans FGSC A4
TMTuber melanosporum Vittad
q8Pichia membranifaciensv1.0
0RmBabjeviella inositovora NRRL Y-12698 v1.0
ipPichia stipitis CBS 6054
ngCandida guilliermondii ATCC 6260
lyLodderomyces elongisporus NRRL YB-4239
dhDebaromyces hansenii
q7Hansenula polymorpha v2.0
wfRCandida tanzawaensis NRRL Y-17324 v1.0
CDCandida dubliniensis CD36
t3Candida tropicalis MYA-3404
ikCandida parapsilosis
alCandida albicans SC5314
zkWickerhamomyces anomalus
WIBHanseniaspora valbyensis NRRL Y-1626 v1.1
ylYarrowia lipolytica CLIB122
Sj2Hyphopichia burtonii NRRL Y-1933 v1.0
iuCandida lusitaniae ATCC 42720
90jMetschnikowia bicuspidata NRRL YB-4993 v1.0
PPPichia pastoris GS115
vwVanderwaltozyma polyspora DSM 70294
glCandida glabrata CBS138
yvKluyveromyces thermotolerans CBS 6340
y4Lachancea kluyveri
kwKluyveromyces waltii
goAshbya gossypii ATCC 10895
urBDekkera bruxellensis CBS 2499 v2.0
yzZygosaccharomyces rouxii
y6Saccharomyces mikatae MIT
y8Saccharomyces paradoxus MIT
xsSaccharomyces cerevisiae 71_4
y1Saccharomyces bayanus MIT
klKluyveromyces lactis
o9Schizosaccharomyces octosporus yFS286
hjSchizosaccharomyces japonicus yFS275
poSchizosaccharomyces pombe
C24Catenaria anguillulae PL171 v1.0
AMAllomyces macrogynus ATCC 38327
MvMortierella verticillata NRRL 6337
x6lConidiobolus coronatus NRRL28638 v1.0
ryRhizopus oryzae RA 99-880
hnPhycomyces blakesleeanus
ulMucor circinelloides
ziSpizellomyces punctatus DAOM BR117
dtDictyostelium discoideum
ydDictyostelium purpureum
EDEntamoeba dispar 1.2
EIEntamoeba invadens 1.2
enEntamoeba histolytica 1
EgEucalyptus grandis v201
TcTheobroma cacao B97-61/B2 v1
p5lGossypium raimondii v221
CcCitrus clementina v165
CsCitrus sinensis v154
kleThellungiella halophila v173
BraBrassica rapa Chiifu-401 1.2
p06Capsella rubella v183
l4Arabidopsis lyrata
atArabidopsis thaliana 10
r6Carica papaya
mwMedicago truncatula
9UDPhaseolus vulgaris v186
ygGlycine max v109
CUCucumis sativus v122
w3Fragaria vesca
cwbMalus domestica v196
PEPrunus persica v139
ZraLinum usitatissimum v200
MEManihot esculenta v147
ptPopulus trichocarpa v156
vtVitis vinifera
MGMimulus guttatus v140
z7Solanum lycopersicum v.2.3
pTSolanum tuberosum
AcAquilegia coerulea v195
BDBrachypodium distachyon
OgOryza glaberrima
osOryza sativa ssp. japonica 5.0
AnKOryza sativa v193
zeZea mays subsp. mays
e0IZea mays v181
ojSorghum bicolor
SiSetaria italica v164
LPnPanicum virgatum v202
gjSelaginella moellendorffii
pwPhyscomitrella patens subsp. patens
o8Ostreococcus sp. RCC809
ozOstreococcus lucimarinus CCE9901
ouOstreococcus tauri
BaBathycoccus
ijMicromonas sp. RCC299
iqMicromonas pusilla CCMP1545 v3.0
CXCoccomyxa sp. C-169
AchAsterochloris sp. Cgr/DA1pho v1.0
h2Chlorella sp. NC64A
vgChlorella vulgaris
voVolvox carteri f. nagariensis
BHKVolvox carteri v199
cyChlamydomonas reinhardtii 4.0
yaCyanidioschyzon merolae
TtThecamonas trahens ATCC 50062
gfGiardia lamblia 2.3
TITrypanosoma vivax
uzTrypanosoma cruzi strain CL Brener
o6Trypanosoma congolense 2.4
TbTrypanosoma brucei TREU927 v4.1
tbTrypanosoma brucei gambiense v4.1
LMLeishmania mexicana 2.4
emLeishmania major strain Friedlin
lhLeishmania infantum JPCM5 2.4
ibLeishmania braziliensis MHOM/BR/75/M2904 2.4
EsEctocarpus siliculosus
a6Aureococcus anophagefferens
PuPythium ultimum v1.7-2
raPhytophthora ramorum 1.1
sjPhytophthora sojae 1.1
iyPhytophthora infestans T30-4
yyPhytophthora capsici
wfPhaeodactylum tricornutumCCAP 1055/1
waFragilariopsis cylindrus
wgThalassiosira pseudonana CCMP1335
PmaPerkinsus marinus ATCC 50983
irParamecium tetraurelia
hyTetrahymena thermophila SB210 1
ImIchthyophthirius multifiliis strain G5
o0Babesia bovis T2Bo
pvTheileria parva
nuTheileria annulata
plPlasmodium falciparum 3D7
vxPlasmodium vivax SaI-1 7.0
fwPlasmodium knowlesi strain H
pyPlasmodium yoelii ssp. yoelii 1
fyPlasmodium chabaudi
fbPlasmodium berghei ANKA
rmCryptosporidium hominis
ucCryptosporidium muris
cvCryptosporidium parvum Iowa II
unNeospora caninum
uvToxoplasma gondii VEG
ueToxoplasma gondii ME49
ugToxoplasma gondii GT1
ebNaegleria gruberi
txTrichomonas vaginalis
weEmiliania huxleyi CCMP1516
9yCandidatus Phytoplasma mali
ayAster yellows witches'-broom phytoplasma AYWB
oyOnion yellows phytoplasma OY-M
8bAcholeplasma laidlawii PG-8A
mfMesoplasma florum L1
8aUreaplasma parvum serovar 3 str. ATCC 27815
uuUreaplasma urealyticum serovar 10 str. ATCC 33699
b5GMycoplasma leachii 99/014/6
hJMycoplasma mycoides subsp. capri LC str. 95010
yiMycoplasma capricolum subsp. capricolum ATCC 27343
aO3Mycoplasma haemocanis str. Illinois
bwrMycoplasma wenyonii str. Massachusetts
dUMycoplasma suis KI3806
awMycoplasma crocodyli MP145
3OMycoplasma conjunctivae HRC/581
aYrMycoplasma haemofelis Ohio2
ZlJMycoplasma bovis HB0801
meMycoplasma penetrans HF-2
bkgMycoplasma putrefaciens KS1
m0Mycoplasma mobile 163K
gLMycoplasma fermentans M64
9wMycoplasma arthritidis 158L3-1
45Mycoplasma agalactiae PG2
ycMycoplasma synoviae 53
mqMycoplasma pulmonis UAB CTIP
biyMycoplasma pneumoniae 309
b3MMycoplasma hyorhinis GDL-1
amRMycoplasma hyopneumoniae 168
6HMycoplasma hominis ATCC 23114
mgMycoplasma genitalium G37
aK2Mycoplasma gallisepticum str. F
4bhThermovirga lienii DSM 17291
7KAminobacterium colombiense DSM 12261
9CThermanaerovibrio acidaminovorans DSM 6589
mM0Anaerobaculum mobile DSM 13181
bCBrachyspira murdochii DSM 12563
qlfBrachyspira intermedia PWS/A
bHBrachyspira pilosicoli 95/1000
3JBrachyspira hyodysenteriae WA1
ED2Turneriella parva DSM 21527
0kLeptospira borgpetersenii serovar Hardjo-bovis str. L550
UbvLeptospira interrogans serovar Lai str. IPAV
83Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'
3ugSphaerochaeta pleomorpha str. Grapes
hASphaerochaeta globus str. Buddy
fZSphaerochaeta coccoides DSM 17374
hFTreponema azotonutricium ZAS-9
czTreponema primitia ZAS-2
a4Treponema brennaborense DSM 12168
KbLTreponema paraluiscuniculi Cuniculi A
ePTreponema succinifaciens DSM 2489
93Treponema pallidum subsp. pallidum SS14
tdTreponema denticola ATCC 35405
etZSpirochaeta caldaria DSM 7334
cJSpirochaeta smaragdinae DSM 11293
CkCSpirochaeta africana DSM 8902
iJSpirochaeta thermophila DSM 6192
gaBorrelia garinii PBi
qBrBorrelia bissettii DN127
q7MBorrelia afzelii PKo
bbBorrelia burgdorferi B31
g7Borrelia recurrentis A1
f7Borrelia duttonii Ly
qccBorrelia crocidurae str. Achema
9cBorrelia turicatae 91E135
9uBorrelia hermsii DAH
fGgPhycisphaera mikurensis NBRC 102666
eFRhodopirellula baltica SH 1
lAIsosphaera pallida ATCC 43644
aAPirellula staleyi DSM 6068
cBPlanctomyces limnophilus DSM 3776
gOPlanctomyces brasiliensis DSM 5305
7JGardnerella vaginalis 409-05
bLBifidobacterium longum subsp. longum JDM301
4EBifidobacterium animalis subsp. lactis Bl-04
7QBifidobacterium dentium Bd1
pUGBifidobacterium breve ACS-071-V-Sch8b
dQBifidobacterium bifidum S17
5gBifidobacterium adolescentis ATCC 15703
58Kineococcus radiotolerans SRS30216
4DCatenulispora acidiphila DSM 44928
9HStackebrandtia nassauensis DSM 44728
3qAcidothermus cellulolyticus 11B
2VNakamurella multipartita DSM 44233
WhkModestobacter marinus
pr7Blastococcus saxobsidens DD2
7FGeodermatophilus obscurus DSM 43160
MaIFrankia symbiont of Datisca glomerata
6pFrankia sp. EAN1pec
1bFrankia alni ACN14a
tfThermobifida fusca YX
dFNocardiopsis dassonvillei subsp. dassonvillei DSM 43111
6VThermomonospora curvata DSM 43183
8UStreptosporangium roseum DSM 43021
ReIKitasatospora setae KM-6054
rB1Streptomyces sp. SirexAA-E
7nStreptomyces griseus subsp. griseus NBRC 13350
KK0Streptomyces bingchenggensis BCW-1
uODStreptomyces violaceusniger Tu 4113
aRDStreptomyces flavogriseus ATCC 33331
s9Streptomyces avermitilis MA-4680
RxhStreptomyces cattleya NRRL 8057 = DSM 46488
7EStreptomyces scabiei 87.22
InzStreptomyces hygroscopicus subsp. jinggangensis 5008
sfStreptomyces coelicolor A3(2)
dDThermobispora bispora DSM 43833
1ZActinosynnema mirum DSM 43827
1QSaccharomonospora viridis DSM 43017
gIPseudonocardia dioxanivorans CB1190
18Saccharopolyspora erythraea NRRL 2338
cWAmycolatopsis mediterranei U32
7AKribbella flavida DSM 17836
0jNocardioides sp. JS614
WeFMicrolunatus phosphovorus NM-1
fvtPropionibacterium propionicum F0230a
8FPropionibacterium acnes SK137
cNPropionibacterium freudenreichii subsp. shermanii CIRM-BIA1
61Salinispora arenicola CNS-205
1hSalinispora tropica CNB-440
lGVerrucosispora maris AB-18-032
iCMicromonospora sp. L5
aYMicromonospora aurantiaca ATCC 27029
lrfActinoplanes sp. SE50/110
lqDActinoplanes missouriensis 431
dGSegniliparus rotundus DSM 44985
bMTsukamurella paurometabola DSM 20162
NY6Gordonia polyisoprenivorans VH2
8GGordonia bronchialis DSM 43247
3rRhodococcus jostii RHA1
eLRhodococcus equi 103S
3ERhodococcus opacus B4
2TRhodococcus erythropolis PR4
dV7Nocardia cyriacigeorgica GUH-2
nfNocardia farcinica IFM 10152
dTAmycolicicoccus subflavus DQS3-9A1
XmdMycobacterium massiliense str. GO 06
8cMycobacterium abscessus ATCC 19977
22Mycobacterium sp. JLS
XJqMycobacterium intracellulare ATCC 13950
59Mycobacterium avium 104
28Mycobacterium vanbaalenii PYR-1
XCAMycobacterium canettii CIPT 140010059
X2BMycobacterium africanum GM041182
1RMycobacterium tuberculosis KZN 1435
07Mycobacterium bovis BCG str. Pasteur 1173P2
XyFMycobacterium rhodesiae NBB3
5oMycobacterium ulcerans Agy99
4hMycobacterium gilvum PYR-GCK
XIJMycobacterium chubuense NBB4
8uMycobacterium marinum M
3eMycobacterium smegmatis str. MC2 155
4YMycobacterium leprae Br4923
GFzCorynebacterium resistens DSM 45100
4ZCorynebacterium aurimucosum ATCC 700975
2HCorynebacterium kroppenstedtii DSM 44385
coCorynebacterium efficiens YS-314
GJnCorynebacterium ulcerans 0102
7hCorynebacterium urealyticum DSM 7109
jkCorynebacterium jeikeium K411
GdiCorynebacterium variabile DSM 44702
FP7Corynebacterium pseudotuberculosis 316
4eCorynebacterium glutamicum R
cdCorynebacterium diphtheriae NCTC 13129
t8Tropheryma whipplei TW08/27
aRSanguibacter keddieii DSM 10542
2GKytococcus sedentarius DSM 20547
5UBeutenbergia cavernae DSM 12333
lxLeifsonia xyli subsp. xyli str. CTCB07
jFMicrobacterium testaceum StLB037
32Clavibacter michiganensis subsp. michiganensis NCPPB 382
2XJonesia denitrificans DSM 20603
fDIntrasporangium calvum DSM 43043
3GBrachybacterium faecium DSM 4810
gRIsoptericola variabilis 225
7IXylanimonas cellulosilytica DSM 15894
cRCellulomonas flavigena DSM 20109
gGCellulomonas fimi ATCC 484
tsl[Cellvibrio] gilvus ATCC 13127
98Kocuria rhizophila DC2201
6QRothia mucilaginosa DY-18
idRothia dentocariosa ATCC 17931
jhArthrobacter phenanthrenivorans Sphe3
1fArthrobacter sp. FB24
gnArthrobacter arilaitensis Re117
6EArthrobacter chlorophenolicus A6
56Arthrobacter aurescens TC1
7fRenibacterium salmoninarum ATCC 33209
2QMicrococcus luteus NCTC 2665
bNMobiluncus curtisii ATCC 43063
bTArcanobacterium haemolyticum DSM 20595
AcfActinomyces sp. F0330
cYOlsenella uli DSM 7084
2UCryptobacterium curtum DSM 15641
IBJEggerthella sp. YY7918
1OEggerthella lenta DSM 2243
4CSlackia heliotrinireducens DSM 20476
jlCoriobacterium glomerans PW2
0RAtopobium parvulum DSM 20469
8NConexibacter woesei DSM 14684
rwRubrobacter xylanophilus DSM 9941
3DAcidimicrobium ferrooxidans DSM 10331
xLNThermodesulfatator indicus DSM 15286
CTyThermodesulfobacterium sp. OPB45
jADesulfurispirillum indicum S5
iICalditerrivibrio nitroreducens DSM 19672
8ODenitrovibrio acetiphilus DSM 12809
7NDeferribacter desulfuricans SSM1
M1OFlexistipes sinusarabici DSM 4947
VwqMesotoga prima MesG1.Ag.4.2
2EKosmotoga olearia TBF 19.5.1
VTGMarinitoga piezophila KA3
6yPetrotoga mobilis SJ95
LSlFervidobacterium pennivorans DSM 9078
3lFervidobacterium nodosum Rt17-B1
2yThermosipho melanesiensis BI429
jtThermosipho africanus TCF52B
5vThermotoga lettingae TMO
92Thermotoga sp. RQ2
2qMThermotoga thermarum DSM 5069
9EThermotoga naphthophila RKU-10
0vThermotoga petrophila RKU-1
1JThermotoga neapolitana DSM 4359
tmThermotoga maritima MSB8
sZNCaldilinea aerophila DSM 14535 = NBRC 104270
etDehalococcoides ethenogenes 195
10Dehalococcoides sp. BAV1
bGDehalogenimonas lykanthroporepellens BL-DC-9
gBAnaerolinea thermophila UNI-1
4MThermomicrobium roseum DSM 5159
7ZSphaerobacter thermophilus DSM 20745
5uHerpetosiphon aurantiacus DSM 785
4aRoseiflexus sp. RS-1
77Roseiflexus castenholzii DSM 13941
2RChloroflexus sp. Y-400-fl
jbChloroflexus aggregans DSM 9485
6wChloroflexus aurantiacus J-10-fl
exThermovibrio ammonificans HB-1
frDesulfurobacterium thermolithotrophum DSM 11699
96Sulfurihydrogenibium sp. YO3AOP1
3ASulfurihydrogenibium azorense Az-Fu1
5NPersephonella marina EX-H1
e8Hydrogenobaculum sp. Y04AAS1
7OThermocrinis albus DSM 14484
aaAquifex aeolicus VF5
ROfHydrogenobacter thermophilus TK-6
6BGemmatimonas aurantiaca T-27
LcgFibrobacter succinogenes subsp. succinogenes S85
a3Candidatus Koribacter versatilis Ellin345
tHQCandidatus Chloracidobacterium thermophilum B
25Candidatus Solibacter usitatus Ellin6076
eDGranulicella tundricola MP5ACTX9
NtMGranulicella mallensis MP5ACTX8
kDTerriglobus saanensis SP1PR4
B0JTerriglobus roseus DSM 18391
2LAcidobacterium capsulatum ATCC 51196
94Elusimicrobium minutum Pei191
k6uncultured Termite group 1 bacterium phylotype Rs-D17
VplMelioribacter roseus P3M
RSKIgnavibacterium album JCM 16511
9sPelodictyon phaeoclathratiforme BU-1
p7Chlorobium luteolum DSM 273
c5Chlorobium chlorochromatii CaD3
3vChlorobium phaeobacteroides DSM 266
1xChlorobium phaeovibrioides DSM 265
fpChlorobium limicola DSM 245
evChlorobaculum parvum NCIB 8327
chChlorobium tepidum TLS
9oChloroherpeton thalassium ATCC 35110
edProsthecochloris aestuarii DSM 271
8JSalinibacter ruber M8
aDRhodothermus marinus DSM 4252
o6dBelliella baltica DSM 15883
Gy3Cyclobacterium marinum DSM 745
dnMarivirga tractuosa DSM 4126
jVLeadbetterella byssophila DSM 17132
2DDyadobacter fermentans DSM 18053
LyGFlexibacter litoralis DSM 6794
37Cytophaga hutchinsonii ATCC 33406
7PSpirosoma linguale DSM 74
0SqRunella slithyformis DSM 19594
h8Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2
bJPrevotella melaninogenica ATCC 25845
fGjPrevotella intermedia 17
fIPrevotella denticola F0289
7YPrevotella ruminicola 23
0gParabacteroides distasonis ATCC 8503
jPPaludibacter propionicigenes WB4
iOOdoribacter splanchnicus DSM 20712
RQbTannerella forsythia ATCC 43037
kTPorphyromonas asaccharolytica DSM 20707
9vPorphyromonas gingivalis ATCC 33277
mELAlistipes finegoldii DSM 17242
eSBacteroides salanitronis DSM 18170
jLBacteroides helcogenes P 36-108
0rBacteroides vulgatus ATCC 8482
btBacteroides thetaiotaomicron VPI-5482
faBacteroides fragilis YCH46
f6Candidatus Amoebophilus asiaticus 5a2
dBCNiastella koreensis GR20-10
5YChitinophaga pinensis DSM 2588
eUHaliscomenobacter hydrossis DSM 1100
WOUSaprospira grandis str. Lewin
652Solitalea canadensis DSM 3403
iRPedobacter saltans DSM 12145
3YPedobacter heparinus DSM 2366
kNSphingobacterium sp. 21
aFCandidatus Sulcia muelleri DMIN
1ICandidatus Sulcia muelleri SMDSEM
kUFluviicola taffensis DSM 16823
dz7Owenweeksia hongkongensis DSM 17368
9XZunongwangia profunda SM-A87
jIKrokinobacter sp. 4H-3-7-5
1sGramella forsetii KT0803
SbYLacinutrix sp. 5H-3-7-4
kSMaribacter sp. HTCC2170
6MRobiginitalea biformata HTCC2501
cQCroceibacter atlanticus HTCC2559
m02Aequorivita sublithincola DSM 14238
jIZZobellia galactanivorans
WwPMuricauda ruestringensis DSM 13258
l6Cellulophaga algicola DSM 14237
kCCellulophaga lytica DSM 7489
4VFlavobacteriaceae bacterium 3519-10
hURiemerella anatipestifer ATCC 11845 = DSM 15868
drYOrnithobacterium rhinotracheale DSM 15997
tq8Capnocytophaga canimorsus Cc5
1MCapnocytophaga ochracea DSM 7271
kXWeeksella virosa DSM 16922
LxIFlavobacterium indicum GPTSA100-9
5dFlavobacterium psychrophilum JIP02/86
Ls9Flavobacterium branchiophilum FL-15
LwWFlavobacterium columnare ATCC 49512
1zFlavobacterium johnsoniae UW101
6XBlattabacterium sp. (Blattella germanica) str. Bge
ixDictyoglomus turgidum DSM 6724
k3Dictyoglomus thermophilum H-6-12
siHCaldisericum exile AZM16c01
dNWaddlia chondrophila WSU 86-1044
p0Candidatus Protochlamydia amoebophila UWE25
ebYParachlamydia acanthamoebae UV-7
iVCSimkania negevensis Z
c1Chlamydophila caviae GPIC
c6Chlamydophila felis Fe/C-56
c4Chlamydophila abortus S26/3
hDChlamydophila pecorum E58
cmChlamydia muridarum Nigg
c2Chlamydophila pneumoniae TW-183
vzjChlamydophila psittaci 01DC11
0QChlamydia trachomatis B/Jali20/OT
6LCoraliomargarita akajimensis DSM 45221
8iOpitutus terrae PB90-1
9hMethylacidiphilum infernorum V4
9aAkkermansia muciniphila ATCC BAA-835
k7Thermodesulfovibrio yellowstonii DSM 11347
cSCandidatus Nitrospira defluvii
UoELeptospirillum ferrooxidans C2-3
7GStreptobacillus moniliformis DSM 12112
8PSebaldella termitidis ATCC 33386
0MLeptotrichia buccalis C-1013-b
hVIlyobacter polytropus DSM 2926
fnFusobacterium nucleatum subsp. nucleatum ATCC 25586
tHRCandidatus Methylomirabilis oxyfera
dRCandidatus Cloacamonas acidaminovorans
8EThermobaculum terrenum ATCC BAA-798
dcTruepera radiovictrix DSM 17093
H47Deinococcus gobiensis I-0
1BDeinococcus deserti VCD115
iLDeinococcus maricopensis DSM 21211
d4Deinococcus geothermalis DSM 11300
jCDeinococcus proteolyticus MRP
drDeinococcus radiodurans R1
fEOceanithermus profundus DSM 14977
gPMarinithermus hydrothermalis DSM 14884
dAMeiothermus silvanus DSM 9946
aLMeiothermus ruber DSM 1279
vmtThermus sp. CCB_US3_UF1
l8Thermus scotoductus SA-01
t0Thermus thermophilus HB27
lNAAcidaminococcus intestini RyC-MR95
8KAcidaminococcus fermentans DSM 20731
8LVeillonella parvula DSM 2008
dSSelenomonas sputigena ATCC 35185
4DqSelenomonas ruminantium subsp. lactilytica TAM6421
VntMegasphaera elsdenii DSM 20460
eVErysipelothrix rhusiopathiae str. Fujisawa
j0Natranaerobius thermophilus JW/NM-WN-LF
jQEthanoligenens harbinense YUAN-3
fFRuminococcus albus 7
sbSymbiobacterium thermophilum IAM 14863
1HAnaerococcus prevotii DSM 20548
8gFinegoldia magna ATCC 29328
gZThermaerobacter marianensis DSM 12885
ZDKSulfobacillus acidophilus DSM 10332
dwDOscillibacter valericigenes Sjm18-20
9ZClostridiales genomosp. BVAB3 str. UPII9-5
7uCandidatus Desulforudis audaxviator MP104C
bFThermincola potens JR
09Pelotomaculum thermopropionicum SI
Hj4Desulfosporosinus acidiphilus SJ4
HkcDesulfosporosinus orientis DSM 765
kKSyntrophobotulus glycolicus DSM 8271
d2Desulfitobacterium hafniense Y51
H7hDesulfitobacterium dehalogenans ATCC 51507
jEDesulfotomaculum carboxydivorans CO-1-SRB
0cDesulfotomaculum reducens MI-1
2PDesulfotomaculum acetoxidans DSM 771
4QDesulfotomaculum kuznetsovii DSM 6115
eBDesulfotomaculum ruminis DSM 2154
kj6Acetobacterium woodii DSM 1030
4PEubacterium rectale ATCC 33656
3NEubacterium eligens ATCC 27750
iXEubacterium limosum KIST612
LrxFilifactor alocis ATCC 35896
eOClostridium sticklandii DSM 519
3xClostridium difficile 630
hEClostridium lentocellum DSM 5427
EPTRoseburia hominis A2-183
dBButyrivibrio proteoclasticus B316
bUSyntrophothermus lipocalidus DSM 12680
2lSyntrophomonas wolfei subsp. wolfei str. Goettingen
8jHeliobacterium modesticaldum Ice1
68Alkaliphilus oremlandii OhILAs
0nAlkaliphilus metalliredigens QYMF
sqRCandidatus Arthromitus sp. SFB-mouse-Japan
wLlClostridium sp. BNL1100
wq1Clostridium clariflavum DSM 19732
d3Clostridium saccharolyticum WM1
5zClostridium phytofermentans ISDg
12Clostridium novyi NT
cFClostridium ljungdahlii DSM 13528
16Clostridium kluyveri DSM 555
0ZClostridium cellulolyticum H10
03Clostridium beijerinckii NCIMB 8052
4xClostridium thermocellum ATCC 27405
teClostridium tetani E88
2fClostridium perfringens ATCC 13124
aVClostridium cellulovorans 743B
0iClostridium botulinum A str. ATCC 3502
caClostridium acetobutylicum ATCC 824
ahMahella australiensis 50-1 BON
cZThermosediminibacter oceani DSM 16646
bVCaldicellulosiruptor obsidiansis OB47
fACaldicellulosiruptor kronotskyensis 2002
iHCaldicellulosiruptor hydrothermalis 108
eJCaldicellulosiruptor owensensis OL
sTuCaldicellulosiruptor lactoaceticus 6A
hNCaldicellulosiruptor kristjanssonii 177R1B
1qCaldicellulosiruptor saccharolyticus DSM 8903
5ECaldicellulosiruptor bescii DSM 6725
gUThermoanaerobacterium xylanolyticum LX-11
cLThermoanaerobacterium thermosaccharolyticum DSM 571
kcThermodesulfobium narugense DSM 14796
h3Coprothermobacter proteolyticus DSM 5265
eATepidanaerobacter acetatoxydans Re1
ttThermoanaerobacter tengcongensis MB4
c9Carboxydothermus hydrogenoformans Z-2901
m8Moorella thermoacetica ATCC 39073
a1Ammonifex degensii KC4
aXThermoanaerobacter mathranii subsp. mathranii str. A3
82Thermoanaerobacter pseudethanolicus ATCC 33223
8dThermoanaerobacter sp. X514
6OThermoanaerobacter italicus Ab9
wFtThermoanaerobacter wiegelii Rt8.B1
fJThermoanaerobacter brockii subsp. finnii Ako-1
cDAcetohalobium arabaticum DSM 5501
5DHalothermothrix orenii H 168
hMHalanaerobium hydrogeniformans
O3vHalanaerobium praevalens DSM 2228
jSCarnobacterium sp. 17-4
kJAerococcus urinae ACS-120-V-Col10a
FimTetragenococcus halophilus NBRC 12172
VtYMelissococcus plutonius DAT561
IzOEnterococcus hirae ATCC 9790
IkZEnterococcus faecium Aus0004
Ib9Enterococcus faecalis 62
AcoWeissella koreensis KACC 15510
4mOenococcus oeni PSU-1
Ur6Leuconostoc sp. C2
cKLeuconostoc kimchii IMSNU 11154
cULeuconostoc gasicomitatum LMG 18811
7xLeuconostoc citreum KM20
2sLeuconostoc mesenteroides subsp. mesenteroides ATCC 8293
1oLactobacillus casei ATCC 334
fXLactobacillus kefiranofaciens ZW3
8ZLactobacillus crispatus ST1
5RLactobacillus rhamnosus Lc 705
8CLactobacillus johnsonii FI9785
TqGLactobacillus sanfranciscensis TMW 1.1304
ToTLactobacillus salivarius CECT 5713
TnrLactobacillus ruminis ATCC 27782
9bLactobacillus fermentum IFO 3956
SdsLactobacillus amylovorus GRL1118
lsLactobacillus sakei subsp. sakei 23K
49Lactobacillus reuteri DSM 20016
13Lactobacillus gasseri ATCC 33323
4LLactobacillus plantarum JDM1
79Lactobacillus helveticus DPC 4571
50Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365
gKLactobacillus buchneri NRRL B-30929
52Lactobacillus brevis ATCC 367
kQLactobacillus acidophilus 30SC
fEhPediococcus claussenii ATCC BAA-344
0dPediococcus pentosaceus ATCC 25745
U1NLactococcus garvieae ATCC 49156
39Lactococcus lactis subsp. cremoris MG1363
OZ0Streptococcus intermedius JTH08
7DStreptococcus gallolyticus UCN34
YMlStreptococcus pseudopneumoniae IS7493
lBStreptococcus pasteurianus ATCC 43144
0SStreptococcus equi subsp. equi 4047
4JStreptococcus dysgalactiae subsp. equisimilis GGS_124
gyKStreptococcus infantarius subsp. infantarius CJ18
gZlStreptococcus macedonicus ACA-DC 198
aPStreptococcus mitis B6
5HStreptococcus uberis 0140J
kFStreptococcus parauberis KCTC 11537
hB8Streptococcus parasanguinis ATCC 15912
4zStreptococcus pyogenes str. Manfredo
1UStreptococcus pneumoniae P1031
a9Streptococcus agalactiae A909
6IStreptococcus mutans NN2025
4wStreptococcus thermophilus LMD-9
0LStreptococcus suis P1/7
5bStreptococcus sanguinis SK36
3SxStreptococcus salivarius 57.I
adStreptococcus oralis Uo5
6sStreptococcus gordonii str. Challis substr. CH1
0HExiguobacterium sp. AT1b
7rExiguobacterium sibiricum 255-15
8DKyrpidia tusciae DSM 2912
4AAlicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446
2FBrevibacillus brevis NBRC 100599
3HPaenibacillus sp. JDR-2
eYGPaenibacillus terrae HPL-003
e8iPaenibacillus mucilaginosus 3016
ePDPaenibacillus polymyxa M1
2gListeria welshimeri serovar 6b str. SLCC5334
liListeria innocua Clip11262
6WListeria seeligeri serovar 1/2b str. SLCC3954
4UListeria monocytogenes serotype 4b str. CLIP 80459
Uu9Listeria ivanovii subsp. ivanovii PAM 55
EibSolibacillus silvestris StLB046
7zLysinibacillus sphaericus C3-41
oiOceanobacillus iheyensis HTE831
j6Anoxybacillus flavithermus WK1
1LGeobacillus sp. WCH70
MuLGeobacillus thermoleovorans CCB_US3_UF5
1uGeobacillus thermodenitrificans NG80-2
gkGeobacillus kaustophilus HTA426
MiGGeobacillus thermoglucosidasius C56-YS93
OEoHalobacillus halophilus DSM 2266
nHIBacillus sp. JS
gDBacillus atrophaeus 1942
bsBacillus subtilis subsp. subtilis str. 168
lfBacillus licheniformis DSM 13 = ATCC 14580
2oBacillus amyloliquefaciens FZB42
bhBacillus halodurans C-125
62Bacillus weihenstephanensis KBAB4
31Bacillus thuringiensis str. Al Hakam
0BBacillus cereus 03BB102
2NBacillus anthracis str. A0248
cGBacillus selenitireducens MLS10
aNBacillus pseudofirmus OF4
x4Bacillus clausii KSM-K16
jZBacillus cellulosilyticus DSM 2522
6fBacillus pumilus SAFR-032
6PBacillus megaterium DSM 319
nCnBacillus coagulans 2-6
1VMacrococcus caseolyticus JCSC5402
gXStaphylococcus pseudintermedius HKU10-03
ztStaphylococcus saprophyticus subsp. saprophyticus ATCC 15305
6TStaphylococcus lugdunensis HKU09-01
zhStaphylococcus haemolyticus JCSC1435
epStaphylococcus epidermidis RP62A
5SStaphylococcus carnosus subsp. carnosus TM300
1iStaphylococcus aureus subsp. aureus JH1
6CNautilia profundicola AmH
aBSulfurospirillum deleyianum DSM 6946
zLbSulfurospirillum barnesii SES-3
mTpArcobacter sp. L
dHArcobacter nitrofigilis DSM 7299
6kArcobacter butzleri RM4018
00Campylobacter hominis ATCC BAA-381
4ICampylobacter lari RM2100
3yCampylobacter curvus 525.92
6xCampylobacter concisus 13826
05Campylobacter jejuni subsp. doylei 269.97
35Campylobacter fetus subsp. fetus 82-40
eESulfuricurvum kujiense DSM 16994
lHSulfurimonas autotrophica DSM 16294
lJSulfurimonas denitrificans DSM 1251
wsWolinella succinogenes DSM 1740
OhSHelicobacter cetorum MIT 00-7128
Of8Helicobacter bizzozeronii CIII-1
hhHelicobacter hepaticus ATCC 51449
9THelicobacter mustelae 12198
jJHelicobacter felis ATCC 49179
OtXHelicobacter cinaedi PAGU611
hlHelicobacter acinonychis str. Sheeba
1XHelicobacter pylori B38
gHNitratifractor salsuginis DSM 16511
1dNitratiruptor sp. SB155-2
1tSulfurovum sp. NBC37-1
dIDesulfarculus baarsii DSM 2075
nnoBacteriovorax marinus SJ
bdBdellovibrio bacteriovorus HD100
iYDesulfobacca acetoxidans DSM 11109
ytSyntrophus aciditrophicus SB
HM0Desulfomonile tiedjei DSM 6799
0lSyntrophobacter fumaroxidans MPOB
cMDesulfurivibrio alkaliphilus AHT2
dpDesulfotalea psychrophila LSv54
iUDesulfobulbus propionicus DSM 2032
9lDesulfatibacillum alkenivorans AK-01
3WDesulfobacterium autotrophicum HRM2
dXDesulfococcus oleovorans Hxd3
2KDesulfohalobium retbaense DSM 5692
6DDesulfomicrobium baculatum DSM 4028
lnLawsonia intracellularis PHE/MN1-00
5KDesulfovibrio magneticus RS-1
hODesulfovibrio aespoeensis Aspo-2
dsDesulfovibrio alaskensis G20
0tDesulfovibrio vulgaris subsp. vulgaris DP4
3FDesulfovibrio salexigens DSM 2638
0VDesulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774
HwcDesulfovibrio africanus str. Walvis Bay
f3Hippea maritima DSM 10411
3cPelobacter propionicus DSM 2379
p8Pelobacter carbinolicus DSM 2380
5ZGeobacter daltonii FRC-32
1GGeobacter sp. M21
3gGeobacter uraniireducens Rf4
9zGeobacter lovleyi SZ
jwGeobacter bemidjiensis Bem
N7yGeobacter sulfurreducens KN400
gmGeobacter metallireducens GS-15
aEHaliangium ochraceum DSM 14365
60Sorangium cellulosum 'So ce 56'
jXStigmatella aurantiaca DW4/3-1
55Anaeromyxobacter sp. Fw109-5
4NAnaeromyxobacter dehalogenans 2CP-1
xdJCorallococcus coralloides DSM 2259
m1Myxococcus xanthus DK 1622
c8RMyxococcus fulvus HW-1
8BSideroxydans lithotrophicus ES-1
bDGallionella capsiferriformans ES-2
azAromatoleum aromaticum EbN1
H1nDechlorosoma suillum PS
djDechloromonas aromatica RCB
5AThauera sp. MZ1T
0qAzoarcus sp. BH72
gDNPseudogulbenkiania sp. NH8B
0NLaribacter hongkongensis HLHK9
viChromobacterium violaceum ATCC 12472
0INeisseria meningitidis alpha14
19Neisseria meningitidis FAM18
hLNeisseria lactamica 020-06
9fNeisseria gonorrhoeae NCCP11945
bBMethylotenera versatilis 301
1WMethylotenera mobilis JLW8
lEMethylovorus sp. MP688
4RMethylovorus glucosetrophus SIP3-4
m7Methylobacillus flagellatus KT
ntThiobacillus denitrificans ATCC 25259
0ECandidatus Accumulibacter phosphatis clade IIA str. UW-1
tSrCandidatus Tremblaya princeps PCIT
14Methylibium petroleiphilum PM1
bSThiomonas intermedia K12
ZlYRubrivivax gelatinosus IL144
7iLeptothrix cholodnii SP-6
rlRalstonia eutropha JMP134
9xCupriavidus taiwanensis LMG 19424
r4Cupriavidus metallidurans CH34
GpGCupriavidus necator N-1
2jRalstonia eutropha H16
2ZRalstonia pickettii 12D
bYRalstonia solanacearum CFBP2957
0sPolynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1
aIBurkholderia sp. CCGE1002
eKBurkholderia rhizoxinica HKI 454
kuBurkholderia phytofirmans PsJN
90Burkholderia phymatum STM815
b5Burkholderia thailandensis E264
20Burkholderia pseudomallei 1106a
1mBurkholderia mallei SAVP1
0uBurkholderia ambifaria AMMD
5lBurkholderia cenocepacia HI2424
76Burkholderia multivorans ATCC 17616
30Burkholderia vietnamiensis G4
b4Burkholderia xenovorans LB400
eMBurkholderia gladioli BSR3
2YBurkholderia glumae BGR1
rxRhodoferax ferrireducens T118
4bVerminephrobacter eiseniae EF01-2
iVAlicycliphilus denitrificans K601
i6wRamlibacter tataouinensis TTB310
eIDelftia sp. Cs1-4
7dDelftia acidovorans SPH-1
p6Polaromonas sp. JS666
01Polaromonas naphthalenivorans CJ2
2BVariovorax paradoxus S110
0UAcidovorax ebreus TPSY
43Acidovorax sp. JS42
4tAcidovorax citrulli AAC00-1
f5Acidovorax avenae subsp. avenae ATCC 19860
fRComamonas testosteroni CNB-2
dWCandidatus Zinderia insecticola CARI
5eHerminiimonas arsenicoxydans
xWECollimonas fungivorans Ter331
4dJanthinobacterium sp. Marseille
bIHerbaspirillum seropedicae SmR1
gNPusillimonas sp. T7-7
lyOAdvenella kashmirensis WT001
RHKTaylorella asinigenitalis MCE3
kGTaylorella equigenitalis MCE9
5yBordetella petrii DSM 12804
9kBordetella avium 197N
beBordetella pertussis Tohama I
bpBordetella parapertussis 12822
boBordetella bronchiseptica RB50
dYAchromobacter xylosoxidans A8
nlNitrosospira multiformis ATCC 25196
dJwNitrosomonas sp. Is79A3
3jNitrosomonas eutropha C91
neNitrosomonas europaea ATCC 19718
53Magnetococcus marinus MC-1
bAParvularcula bermudensis HTCC2503
hCAsticcacaulis excentricus CB 48
dCBrevundimonas subvibrioides ATCC 15264
7oCaulobacter sp. K31
3BCaulobacter crescentus NA1000
8ACaulobacter segnis ATCC 21756
kkPhenylobacterium zucineum HLK1
eyErythrobacter litoralis HTCC2594
akSphingopyxis alaskensis RB2256
fUNovosphingobium sp. PP1Y
nvNovosphingobium aromaticivorans DSM 12444
7euSphingobium sp. SYK-6
9tSphingobium japonicum UT26S
g4Sphingobium chlorophenolicum L-1
2iSphingomonas wittichii RW1
8IZymomonas mobilis subsp. mobilis NCIMB 11163
2xMaricaulis maris MCS10
5WHirschia baltica ATCC 49814
54Hyphomonas neptunium ATCC 15444
6qDinoroseobacter shibae DFL 12
qabPhaeobacter gallaeciensis 2.10
hMiPseudovibrio sp. FO-BEG1
jaJannaschia sp. CCS1
icRuegeria sp. TM1040
sgRuegeria pomeroyi DSS-3
iBKetogulonicigenium vulgare Y25
RWaKetogulonigenium vulgarum WSH-001
mdVRoseobacter litoralis Och 149
2rRoseobacter denitrificans OCh 114
21Rhodobacter sphaeroides ATCC 17029
6NRhodobacter capsulatus SB 1003
27Paracoccus denitrificans PD1222
SjQTistrella mobilis KA081020-065
m5Magnetospirillum magneticum AMB-1
kgRhodospirillum centenum SW
iNaRhodospirillum rubrum F11
iFERhodospirillum photometricum DSM 122
9RAzospirillum sp. B510
mbzAzospirillum lipoferum 4B
mV3Azospirillum brasilense Sp245
3mGranulibacter bethesdensis CGDNIH1
7cGluconacetobacter diazotrophicus PAl 5
NUHGluconacetobacter xylinus NBRC 3288
lKAcidiphilium multivorum AIU301
hTAcidiphilium cryptum JF-5
oxGluconobacter oxydans 621H
1SAcetobacter pasteurianus IFO 3283-01
fQPolymorphum gilvum SL003B-26A1
WVwMicavibrio aeruginosavorus ARL-13
9WCandidatus Puniceispirillum marinum IMCC1322
jHCandidatus Pelagibacter sp. IMCC9063
tJNCandidatus Midichloria mitochondrii IricVA
ncNeorickettsia sennetsu str. Miyayama
0TNeorickettsia risticii str. Illinois
9qWolbachia endosymbiont of Culex quinquefasciatus Pel
5TWolbachia sp. wRi
egEhrlichia chaffeensis str. Arkansas
elEhrlichia canis str. Jake
eaEhrlichia ruminantium str. Gardel
asAnaplasma phagocytophilum HZ
0CAnaplasma marginale str. Florida
9DAnaplasma centrale str. Israel
2qOrientia tsutsugamushi str. Boryong
6iRickettsia bellii OSU 85-389
6hRickettsia canadensis str. McKiel
rtRickettsia typhi str. Wilmington
jkWRickettsia prowazekii str. BuV67-CWPP
jgRRickettsia philipii str. 364D
jHXRickettsia heilongjiangensis 054
0WRickettsia peacockii str. Rustic
rfRickettsia felis URRWXCal2
uzJRickettsia slovaca 13-B
jTTRickettsia parkeri str. Portsmouth
6aRickettsia massiliae MTU5
jIhRickettsia japonica YH
2CRickettsia africae ESF-5
kEcRickettsia rhipicephali str. 3-7-female6-CWPP
jOPRickettsia montanensis str. OSU 85-930
tNrCandidatus Rickettsia amblyommii str. GAT-30V
ioyRickettsia australis str. Cutlack
74Rickettsia akari str. Hartford
6bRickettsia rickettsii str. 'Sheila Smith'
rcRickettsia conorii str. Malish 7
cVStarkeya novella DSM 506
2dXanthobacter autotrophicus Py2
75Azorhizobium caulinodans ORS 571
j5Methylobacterium chloromethanicum CM4
4GMethylobacterium extorquens AM1
7sMethylobacterium sp. 4-46
fjMethylobacterium populi BJ001
6GMethylobacterium nodulans ORS 2060
7wMethylobacterium radiotolerans JCM 2831
1KCandidatus Hodgkinia cicadicola Dsem
40Ochrobactrum anthropi ATCC 49188
1YBrucella microti CCM 4915
rHrBrucella pinnipedialis B2/94
6zBrucella canis ATCC 23365
6gBrucella suis ATCC 23445
1EBrucella melitensis ATCC 23457
1kBrucella ovis ATCC 25840
91Brucella abortus S19
1TSinorhizobium fredii NGR234
2mSinorhizobium medicae WSM419
gWSinorhizobium meliloti AK83
9pRhizobium etli CIAT 652
17Rhizobium leguminosarum bv. viciae 3841
auAgrobacterium tumefaciens str. C58
0YAgrobacterium radiobacter K84
kWAgrobacterium sp. H13-3
5CAgrobacterium vitis S4
3ZCandidatus Liberibacter asiaticus str. psy62
0pMesorhizobium sp. BNC1
1eParvibaculum lavamentivorans DS-1
VuPMesorhizobium opportunistum WSM2075
iAMesorhizobium ciceri biovar biserrulae WSM1271
mkMesorhizobium loti MAFF303099
keMethylocella silvestris BL2
8qBeijerinckia indica subsp. indica ATCC 9039
fFwPelagibacterium halotolerans B2
fCRhodomicrobium vannielii ATCC 17100
ROpHyphomicrobium sp. MC1
bZHyphomicrobium denitrificans ATCC 51888
dZFOligotropha carboxidovorans OM4
5kRhodopseudomonas palustris BisA53
wiNitrobacter winogradskyi Nb-255
nbNitrobacter hamburgensis X14
26Bradyrhizobium sp. ORS 278
bjBradyrhizobium japonicum USDA 110