SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY Assignments for Genomes and Sequence Collections

We provide assignments for 3245 distinct organisms.

Model Eukaryotes (428) animals (134), fungi (173), plants (66) and protists (55)
Model Prokaryotes (1274) model bacteria (1153) and archaea (121)
Eukaryote strains (58);
Prokaryote strains (1485)
animals (5), fungi (46), plants (3) and protists (4);
bacterial (1442) and archaeal (43)
Longest transcript per gene (62) eukaryote genomes with splice variants removed
Others (20);
Sequence collections (130)
incomplete, low coverage or early release genomes;
UniProt, PDB, viral sequences etc
(show info)

Email superfamily@cs.bris.ac.uk to have a genome added and/or analysed.