SUPERFAMILY 1.75 HMM library and genome assignments server

Bacteroides sp. CF50 superfamily assignments

Taxonomy
Taxonomy browser entry

Bacteria; Bacteroidetes/Chlorobi group; Bacteroidetes; Bacteroidia; Bacteroidales; unclassified Bacteroidales; unclassified Bacteroidales (miscellaneous); Bacteroidales bacterium CF

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Domain assignments


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Assignment statistics

Sequences: 2306 total
1622 (70 %) with assignment
357 average length
61 % amino acid coverage
Domains: 2401 total
583 unique superfamilies
366 unique families
308 average length
4.1 average superfamily size
76 % formed by duplication
Domain combinations: 378 domain pairs
861 unique architectures

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Superfamily assignments

Domains

Proteins

Architectures

Families

SCOP link

Superfamilies

178 155 58 9 SCOP 52540 P-loop containing nucleoside triphosphate hydrolases
53 52 19 5 SCOP 51735 NAD(P)-binding Rossmann-fold domains
43 33 10 1 SCOP 48452 TPR-like
43 43 10 0 SCOP 56935 Porins
37 37 10 0 SCOP 49464 Carboxypeptidase regulatory domain-like
35 27 19 3 SCOP 50249 Nucleic acid-binding proteins
35 32 9 1 SCOP 52833 Thioredoxin-like
31 31 20 1 SCOP 55874 ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
30 19 8 4 SCOP 53067 Actin-like ATPase domain
28 28 12 0 SCOP 46785 "Winged helix" DNA-binding domain
28 28 7 4 SCOP 53335 S-adenosyl-L-methionine-dependent methyltransferases
25 25 5 3 SCOP 53098 Ribonuclease H-like
25 24 3 5 SCOP 53383 PLP-dependent transferases
24 22 18 0 SCOP 54862 4Fe-4S ferredoxins
24 24 11 5 SCOP 51445 (Trans)glycosidases
22 19 14 6 SCOP 54211 Ribosomal protein S5 domain 2-like
22 21 13 1 SCOP 52172 CheY-like
22 22 14 0 SCOP 47384 Homodimeric domain of signal transducing histidine kinase
21 20 3 2 SCOP 53756 UDP-Glycosyltransferase/glycogen phosphorylase
21 19 6 2 SCOP 55729 Acyl-CoA N-acyltransferases (Nat)
19 19 5 3 SCOP 53448 Nucleotide-diphospho-sugar transferases
19 17 12 2 SCOP 51905 FAD/NAD(P)-binding domain
19 19 3 0 SCOP 102114 Radical SAM enzymes
19 17 8 0 SCOP 46689 Homeodomain-like
19 6 4 1 SCOP 63411 LuxS/MPP-like metallohydrolase
18 17 2 0 SCOP 88659 Sigma3 and sigma4 domains of RNA polymerase sigma factors
17 16 3 1 SCOP 103473 MFS general substrate transporter
17 17 9 1 SCOP 53187 Zn-dependent exopeptidases
17 17 2 0 SCOP 88946 Sigma2 domain of RNA polymerase sigma factors
17 9 8 1 SCOP 82866 Multidrug efflux transporter AcrB transmembrane domain
16 12 10 1 SCOP 53850 Periplasmic binding protein-like II
16 12 12 0 SCOP 55785 PYP-like sensor domain (PAS domain)
15 14 8 1 SCOP 56300 Metallo-dependent phosphatases
15 15 11 2 SCOP 55681 Class II aaRS and biotin synthetases
15 12 7 4 SCOP 52096 ClpP/crotonase
15 10 3 2 SCOP 53901 Thiolase-like
14 14 5 2 SCOP 53474 alpha/beta-Hydrolases
14 14 5 2 SCOP 56784 HAD-like
14 14 11 3 SCOP 52374 Nucleotidylyl transferase
14 11 7 7 SCOP 52518 Thiamin diphosphate-binding fold (THDP-binding)
14 13 10 0 SCOP 46548 alpha-helical ferredoxin
14 6 5 0 SCOP 82693 Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains
13 13 7 2 SCOP 56601 beta-lactamase/transpeptidase-like
12 8 7 1 SCOP 54534 FKBP-like
12 12 2 0 SCOP 56954 Outer membrane efflux proteins (OEP)
12 6 5 0 SCOP 82714 Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains
11 11 3 3 SCOP 51182 RmlC-like cupins
11 11 3 2 SCOP 48179 6-phosphogluconate dehydrogenase C-terminal domain-like
10 10 5 4 SCOP 51569 Aldolase
10 9 5 3 SCOP 100950 NagB/RpiA/CoA transferase-like
10 9 4 0 SCOP 52266 SGNH hydrolase
10 9 4 0 SCOP 111369 HlyD-like secretion proteins
10 8 6 0 SCOP 50156 PDZ domain-like
9 9 4 4 SCOP 51556 Metallo-dependent hydrolases
9 9 6 3 SCOP 52402 Adenine nucleotide alpha hydrolases-like
9 9 5 1 SCOP 55486 Metalloproteases ("zincins"), catalytic domain
9 8 3 0 SCOP 54637 Thioesterase/thiol ester dehydrase-isomerase
9 9 4 0 SCOP 54001 Cysteine proteinases
9 8 7 2 SCOP 50447 Translation proteins
9 9 2 0 SCOP 47413 lambda repressor-like DNA-binding domains
9 6 5 0 SCOP 55021 ACT-like
9 7 6 1 SCOP 47781 RuvA domain 2-like
9 5 4 1 SCOP 54980 EF-G C-terminal domain-like
9 3 2 0 SCOP 53738 Phosphoglucomutase, first 3 domains
8 7 7 2 SCOP 56059 Glutathione synthetase ATP-binding domain-like
8 8 3 2 SCOP 56281 Metallo-hydrolase/oxidoreductase
8 8 4 0 SCOP 82171 DPP6 N-terminal domain-like
8 8 4 4 SCOP 55347 Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
7 7 6 1 SCOP 52317 Class I glutamine amidotransferase-like
7 7 4 2 SCOP 53271 PRTase-like
7 7 3 0 SCOP 69593 Glycerol-3-phosphate (1)-acyltransferase
7 7 3 3 SCOP 75217 alpha/beta knot
7 7 2 1 SCOP 51161 Trimeric LpxA-like enzymes
7 7 2 1 SCOP 53686 Tryptophan synthase beta subunit-like PLP-dependent enzymes
7 7 2 1 SCOP 56801 Acetyl-CoA synthetase-like
7 5 5 0 SCOP 81901 HCP-like
7 7 5 0 SCOP 46894 C-terminal effector domain of the bipartite response regulators
7 4 3 0 SCOP 103481 Multidrug resistance efflux transporter EmrE
7 6 6 1 SCOP 47323 Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
6 6 5 2 SCOP 50104 Translation proteins SH3-like domain
6 6 3 0 SCOP 51261 Duplicated hybrid motif
6 6 5 1 SCOP 109604 HD-domain/PDEase-like
6 6 5 1 SCOP 48208 Six-hairpin glycosidases
6 5 5 1 SCOP 55781 GAF domain-like
6 6 5 1 SCOP 51230 Single hybrid motif
6 6 4 1 SCOP 53955 Lysozyme-like
6 3 2 0 SCOP 116734 DNA methylase specificity domain
6 6 2 0 SCOP 56219 DNase I-like
6 4 4 0 SCOP 54106 LysM domain
6 6 4 2 SCOP 52922 TK C-terminal domain-like
6 3 2 0 SCOP 53681 Aspartate/glutamate racemase
6 5 3 1 SCOP 56042 PurM C-terminal domain-like
5 5 2 2 SCOP 53927 Cytidine deaminase-like
5 5 3 3 SCOP 55120 Pseudouridine synthase
5 5 4 1 SCOP 55174 Alpha-L RNA-binding motif
5 5 4 0 SCOP 52980 Restriction endonuclease-like
5 5 1 2 SCOP 48557 L-aspartase-like
5 5 2 1 SCOP 51395 FMN-linked oxidoreductases
5 5 4 0 SCOP 88713 Glycoside hydrolase/deacetylase
5 5 3 2 SCOP 52151 FabD/lysophospholipase-like
5 5 4 0 SCOP 54631 CBS-domain pair
5 5 2 1 SCOP 50494 Trypsin-like serine proteases
5 5 2 1 SCOP 56349 DNA breaking-rejoining enzymes
5 5 4 2 SCOP 81301 Nucleotidyltransferase
5 5 4 3 SCOP 52467 DHS-like NAD/FAD-binding domain
5 5 3 0 SCOP 103088 OmpA-like
5 5 3 0 SCOP 51338 Composite domain of metallo-dependent hydrolases
5 5 1 0 SCOP 48498 Tetracyclin repressor-like, C-terminal domain
5 5 3 1 SCOP 53244 MurD-like peptide ligases, peptide-binding domain
5 4 3 1 SCOP 81665 Calcium ATPase, transmembrane domain M
5 3 3 0 SCOP 116726 TrkA C-terminal domain-like
5 5 3 2 SCOP 53623 MurD-like peptide ligases, catalytic domain
5 5 5 1 SCOP 53920 Fe-only hydrogenase
5 4 2 1 SCOP 55326 PurM N-terminal domain-like
4 4 1 2 SCOP 53697 SIS domain
4 4 2 2 SCOP 51366 Ribulose-phoshate binding barrel
4 4 4 0 SCOP 57716 Glucocorticoid receptor-like (DNA-binding domain)
4 4 4 1 SCOP 47240 Ferritin-like
4 4 1 0 SCOP 47336 ACP-like
4 4 1 3 SCOP 53659 Isocitrate/Isopropylmalate dehydrogenase-like
4 4 4 0 SCOP 109998 Triger factor/SurA peptide-binding domain-like
4 4 2 2 SCOP 53633 Carbamate kinase-like
4 4 2 1 SCOP 111283 Putative modulator of DNA gyrase, PmbA/TldD
4 4 4 0 SCOP 54292 2Fe-2S ferredoxin-like
4 4 2 1 SCOP 51412 Inosine monophosphate dehydrogenase (IMPDH)
4 4 1 2 SCOP 56796 Dehydroquinate synthase-like
4 4 3 2 SCOP 51419 PLP-binding barrel
4 4 2 0 SCOP 48371 ARM repeat
4 4 2 0 SCOP 55469 FMN-dependent nitroreductase-like
4 4 3 0 SCOP 81296 E set domains
4 4 2 2 SCOP 53649 Alkaline phosphatase-like
4 4 4 1 SCOP 52954 Class II aaRS ABD-related
4 4 4 0 SCOP 52091 SpoIIaa-like
4 4 1 0 SCOP 54593 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
4 4 3 0 SCOP 89550 PHP domain-like
4 4 2 0 SCOP 54913 GlnB-like
4 4 3 0 SCOP 53822 Periplasmic binding protein-like I
4 4 2 0 SCOP 50969 YVTN repeat-like/Quinoprotein amine dehydrogenase
4 4 1 0 SCOP 89392 Prokaryotic lipoproteins and lipoprotein localization factors
4 3 3 1 SCOP 54814 Prokaryotic type KH domain (KH-domain type II)
4 4 3 1 SCOP 52242 Cobalamin (vitamin B12)-binding domain
4 4 3 0 SCOP 56925 OMPA-like
4 4 2 0 SCOP 74653 TolA/TonB C-terminal domain
4 4 3 1 SCOP 56176 FAD-binding/transporter-associated domain-like
4 4 1 0 SCOP 63825 YWTD domain
4 4 3 1 SCOP 56719 Type II DNA topoisomerase
4 3 3 1 SCOP 52440 PreATP-grasp domain
4 4 3 1 SCOP 48334 DNA repair protein MutS, domain III
4 4 1 1 SCOP 55031 Bacterial exopeptidase dimerisation domain
4 4 4 1 SCOP 81271 TGS-like
4 4 3 0 SCOP 81653 Calcium ATPase, transduction domain A
3 3 1 1 SCOP 53167 Purine and uridine phosphorylases
3 3 1 1 SCOP 53613 Ribokinase-like
3 3 3 1 SCOP 55920 Creatinase/aminopeptidase
3 3 3 0 SCOP 52218 Flavoproteins
3 3 2 0 SCOP 50129 GroES-like
3 2 2 0 SCOP 81333 F1F0 ATP synthase subunit C
3 3 3 0 SCOP 52821 Rhodanese/Cell cycle control phosphatase
3 3 1 2 SCOP 53720 ALDH-like
3 3 3 3 SCOP 51621 Phosphoenolpyruvate/pyruvate domain
3 3 3 1 SCOP 56235 N-terminal nucleophile aminohydrolases (Ntn hydrolases)
3 3 2 2 SCOP 50475 FMN-binding split barrel
3 3 1 0 SCOP 55315 L30e-like
3 2 2 1 SCOP 54506 Diaminopimelate epimerase-like
3 3 2 0 SCOP 52058 L domain-like
3 3 2 0 SCOP 52283 Formate/glycerate dehydrogenase catalytic domain-like
3 3 1 1 SCOP 55620 Tetrahydrobiopterin biosynthesis enzymes-like
3 3 2 0 SCOP 46955 Putative DNA-binding domain
3 3 3 0 SCOP 53300 vWA-like
3 3 2 0 SCOP 161111 Cation efflux protein transmembrane domain-like
3 2 2 0 SCOP 50998 Quinoprotein alcohol dehydrogenase-like
3 3 3 0 SCOP 88697 PUA domain-like
3 2 2 0 SCOP 101386 all-alpha NTP pyrophosphatases
3 3 3 2 SCOP 52335 Methylglyoxal synthase-like
3 3 2 0 SCOP 140931 Fic-like
3 3 3 1 SCOP 53323 Pyruvate-ferredoxin oxidoreductase, PFOR, domain III
3 3 1 0 SCOP 111384 OmpH-like
3 3 2 2 SCOP 51703 Cobalamin (vitamin B12)-dependent enzymes
3 3 2 2 SCOP 51604 Enolase C-terminal domain-like
3 3 3 0 SCOP 103501 Respiratory nitrate reductase 1 gamma chain
3 3 3 1 SCOP 55186 ThrRS/AlaRS common domain
3 3 2 1 SCOP 55424 FAD/NAD-linked reductases, dimerisation (C-terminal) domain
3 3 2 0 SCOP 52343 Ferredoxin reductase-like, C-terminal NADP-linked domain
3 3 1 1 SCOP 90123 ABC transporter transmembrane region
3 3 2 0 SCOP 46589 tRNA-binding arm
3 1 1 0 SCOP 55979 DNA clamp
3 3 1 2 SCOP 53223 Aminoacid dehydrogenase-like, N-terminal domain
3 3 2 1 SCOP 48019 post-AAA+ oligomerization domain-like
3 1 1 1 SCOP 55973 S-adenosylmethionine synthetase
3 3 2 0 SCOP 51011 Glycosyl hydrolase domain
3 3 2 0 SCOP 50621 Alanine racemase C-terminal domain-like
3 3 2 1 SCOP 54826 Enolase N-terminal domain-like
3 3 1 0 SCOP 55060 GHMP Kinase, C-terminal domain
3 3 2 0 SCOP 63380 Riboflavin synthase domain-like
3 3 1 0 SCOP 52413 UDP-glucose/GDP-mannose dehydrogenase C-terminal domain
3 3 2 0 SCOP 117892 Band 7/SPFH domain
3 3 3 1 SCOP 50677 ValRS/IleRS/LeuRS editing domain
3 3 2 0 SCOP 55545 beta-N-acetylhexosaminidase-like domain
3 3 2 0 SCOP 55957 Phosphoglucomutase, C-terminal domain
3 3 3 1 SCOP 142019 Nqo1 FMN-binding domain-like
3 3 2 1 SCOP 47917 C-terminal domain of alpha and beta subunits of F1 ATP synthase
2 2 2 1 SCOP 56731 DNA primase core
2 2 2 0 SCOP 161098 MetI-like
2 2 1 0 SCOP 57829 Zn-binding ribosomal proteins
2 2 1 1 SCOP 53790 Tetrapyrrole methylase
2 2 1 1 SCOP 52141 Uracil-DNA glycosylase-like
2 2 2 1 SCOP 56420 Peptide deformylase
2 2 2 0 SCOP 81606 PP2C-like
2 2 2 0 SCOP 56112 Protein kinase-like (PK-like)
2 2 2 0 SCOP 54197 HIT-like
2 2 1 1 SCOP 53137 Translational machinery components
2 2 2 1 SCOP 64182 DHH phosphoesterases
2 1 1 0 SCOP 56214 4'-phosphopantetheinyl transferase
2 2 1 1 SCOP 53784 Phosphofructokinase
2 2 1 0 SCOP 89447 AbrB/MazE/MraZ-like
2 2 1 1 SCOP 53597 Dihydrofolate reductase-like
2 2 1 0 SCOP 143800 L28p-like
2 2 1 1 SCOP 75620 Release factor
2 2 2 0 SCOP 82649 SufE/NifU
2 2 1 0 SCOP 47729 IHF-like DNA-binding proteins
2 2 1 0 SCOP 109755 PhoU-like
2 2 1 2 SCOP 64484 beta and beta-prime subunits of DNA dependent RNA-polymerase
2 2 1 1 SCOP 48150 DNA-glycosylase
2 2 2 1 SCOP 111337 QueA-like
2 2 2 1 SCOP 50715 Ribosomal protein L25-like
2 2 1 0 SCOP 55811 Nudix
2 2 2 0 SCOP 53254 Phosphoglycerate mutase-like
2 2 2 1 SCOP 55205 EPT/RTPC-like
2 2 1 1 SCOP 48576 Terpenoid synthases
2 2 2 0 SCOP 75169 DsrEFH-like
2 2 2 2 SCOP 56672 DNA/RNA polymerases
2 2 1 0 SCOP 50891 Cyclophilin-like
2 2 2 1 SCOP 53328 Formyltransferase
2 2 2 0 SCOP 49785 Galactose-binding domain-like
2 1 1 0 SCOP 50630 Acid proteases
2 2 2 0 SCOP 56317 Carbon-nitrogen hydrolase
2 2 1 0 SCOP 54928 RNA-binding domain, RBD
2 2 2 0 SCOP 51306 LexA/Signal peptidase
2 2 1 2 SCOP 52972 ITPase-like
2 2 2 0 SCOP 55008 HMA, heavy metal-associated domain
2 2 2 0 SCOP 52768 Arginase/deacetylase
2 2 1 1 SCOP 55909 Pentein
2 2 1 1 SCOP 101960 Stabilizer of iron transporter SufD
2 2 2 1 SCOP 55931 Glutamine synthetase/guanido kinase
2 2 2 1 SCOP 102405 MCP/YpsA-like
2 2 2 0 SCOP 143422 Transposase IS200-like
2 2 2 1 SCOP 51717 Dihydropteroate synthetase-like
2 2 1 1 SCOP 158446 IVS-encoded protein-like
2 2 2 0 SCOP 51998 PFL-like glycyl radical enzymes
2 2 1 0 SCOP 47598 Ribbon-helix-helix
2 2 2 0 SCOP 52016 LeuD/IlvD-like
2 2 2 0 SCOP 57783 Zinc beta-ribbon
2 2 2 0 SCOP 117916 Fe-S cluster assembly (FSCA) domain-like
2 2 2 1 SCOP 52507 Homo-oligomeric flavin-containing Cys decarboxylases, HFCD
2 2 1 0 SCOP 51206 cAMP-binding domain-like
2 2 1 0 SCOP 102215 Creatininase
2 2 1 0 SCOP 48600 Chorismate mutase II
2 2 2 1 SCOP 56645 Acyl-CoA dehydrogenase NM domain-like
2 2 1 1 SCOP 118215 Proton glutamate symport protein
2 2 2 0 SCOP 57802 Rubredoxin-like
2 2 1 1 SCOP 50814 Lipocalins
2 2 1 0 SCOP 75138 HprK N-terminal domain-like
2 2 1 0 SCOP 53146 Nitrogenase accessory factor-like
2 1 1 0 SCOP 56024 Phospholipase D/nuclease
2 2 2 1 SCOP 48695 Multiheme cytochromes
2 2 2 0 SCOP 102198 Putative cyclase
2 2 2 1 SCOP 46565 Chaperone J-domain
2 2 2 0 SCOP 53092 Creatinase/prolidase N-terminal domain
2 2 2 1 SCOP 47203 Acyl-CoA dehydrogenase C-terminal domain-like
2 2 2 0 SCOP 52743 Subtilisin-like
2 2 1 0 SCOP 55103 FAD-linked oxidases, C-terminal domain
2 2 2 0 SCOP 101898 NHL repeat
2 1 1 0 SCOP 117281 Kelch motif
2 2 2 0 SCOP 81573 F1F0 ATP synthase subunit B, membrane domain
2 2 2 0 SCOP 51971 Nucleotide-binding domain
2 2 2 0 SCOP 49265 Fibronectin type III
2 2 2 0 SCOP 55816 5'-nucleotidase (syn. UDP-sugar hydrolase), C-terminal domain
2 2 2 0 SCOP 158472 HAMP domain-like
2 2 1 0 SCOP 82679 N-utilization substance G protein NusG, N-terminal domain
2 1 1 0 SCOP 52210 Succinyl-CoA synthetase domains
2 2 2 1 SCOP 56037 PheT/TilS domain
2 2 1 1 SCOP 53671 Aspartate/ornithine carbamoyltransferase
2 2 2 0 SCOP 142984 Nqo1 middle domain-like
2 2 2 0 SCOP 74853 Lamin A/C globular tail domain
2 1 1 1 SCOP 143968 UbiD C-terminal domain-like
2 2 2 0 SCOP 54791 Eukaryotic type KH-domain (KH-domain type I)
2 2 1 1 SCOP 56425 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain
2 2 1 0 SCOP 81660 Metal cation-transporting ATPase, ATP-binding domain N
2 2 1 0 SCOP 46977 Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain
2 2 2 0 SCOP 46600 C-terminal UvrC-binding domain of UvrB
2 2 1 0 SCOP 63418 MurE/MurF N-terminal domain
2 2 1 0 SCOP 51984 MurCD N-terminal domain
2 1 1 1 SCOP 56053 Ribosomal protein L6
2 1 1 1 SCOP 55116 Formiminotransferase domain of formiminotransferase-cyclodeaminase.
2 2 2 0 SCOP 140490 Nqo1C-terminal domain-like
2 2 1 0 SCOP 53743 FucI/AraA N-terminal and middle domains
2 2 1 0 SCOP 50615 N-terminal domain of alpha and beta subunits of F1 ATP synthase
2 1 1 0 SCOP 49493 HSP40/DnaJ peptide-binding domain
2 1 1 0 SCOP 55666 Ribonuclease PH domain 2-like
2 2 2 0 SCOP 54184 Penicillin-binding protein 2x (pbp-2x), c-terminal domain
2 2 2 0 SCOP 56519 Penicillin binding protein dimerisation domain
1 1 1 0 SCOP 48013 NusB-like
1 1 1 1 SCOP 81338 Aquaporin-like
1 1 1 1 SCOP 74982 Small protein B (SmpB)
1 1 1 1 SCOP 56808 Ribosomal protein L1
1 1 1 1 SCOP 53178 Peptidyl-tRNA hydrolase-like
1 1 1 1 SCOP 47973 Ribosomal protein S7
1 1 1 1 SCOP 143597 YojJ-like
1 1 1 0 SCOP 142433 CinA-like
1 1 1 1 SCOP 111331 NAD kinase/diacylglycerol kinase-like
1 1 1 0 SCOP 89919 Ribosome-binding factor A, RbfA
1 1 1 1 SCOP 54999 Ribosomal protein S10
1 1 1 1 SCOP 52166 Ribosomal protein L4
1 1 1 0 SCOP 54189 Ribosomal proteins S24e, L23 and L15e
1 1 1 1 SCOP 54570 Ribosomal protein S19
1 1 1 0 SCOP 54843 Ribosomal protein L22
1 1 1 1 SCOP 54686 Ribosomal protein L16p/L10e
1 1 1 1 SCOP 50193 Ribosomal protein L14
1 1 1 1 SCOP 55282 RL5-like
1 1 1 1 SCOP 56047 Ribosomal protein S8
1 1 1 1 SCOP 52080 Ribosomal proteins L15p and L18e
1 1 1 0 SCOP 103491 Preprotein translocase SecY subunit
1 1 1 1 SCOP 46946 S13-like H2TH domain
1 1 1 1 SCOP 64263 Prokaryotic ribosomal protein L17
1 1 1 0 SCOP 143034 L35p-like
1 1 1 1 SCOP 74731 Ribosomal protein L20
1 1 1 1 SCOP 55831 Thymidylate synthase/dCMP hydroxymethylase
1 1 1 0 SCOP 141091 L21p-like
1 1 1 0 SCOP 110324 Ribosomal L27 protein-like
1 1 1 1 SCOP 51658 Xylose isomerase-like
1 1 1 0 SCOP 51695 PLC-like phosphodiesterases
1 1 1 1 SCOP 53748 Phosphoglycerate kinase
1 1 1 1 SCOP 75625 YebC-like
1 1 1 0 SCOP 160369 Ribosomal protein L10-like
1 1 1 0 SCOP 46992 Ribosomal protein S20
1 1 1 1 SCOP 89623 Ribose/Galactose isomerase RpiB/AlsB
1 1 1 1 SCOP 52943 ATP synthase (F1-ATPase), gamma subunit
1 1 1 1 SCOP 52161 Ribosomal protein L13
1 1 1 0 SCOP 47060 S15/NS1 RNA-binding domain
1 1 1 1 SCOP 82784 OsmC-like
1 1 1 1 SCOP 51351 Triosephosphate isomerase (TIM)
1 1 1 1 SCOP 55194 Ribosome recycling factor, RRF
1 1 1 0 SCOP 54565 Ribosomal protein S16
1 1 1 1 SCOP 69765 IpsF-like
1 1 1 1 SCOP 51730 FAD-linked oxidoreductase
1 1 1 0 SCOP 55821 YrdC/RibB
1 1 1 1 SCOP 103263 Chorismate synthase, AroC
1 1 1 1 SCOP 51283 dUTPase-like
1 1 1 1 SCOP 51713 tRNA-guanine transglycosylase
1 1 1 0 SCOP 56770 HydA/Nqo6-like
1 1 1 1 SCOP 52313 Ribosomal protein S2
1 1 1 1 SCOP 64005 Undecaprenyl diphosphate synthase
1 1 1 1 SCOP 102705 NIF3 (NGG1p interacting factor 3)-like
1 1 1 1 SCOP 81345 ABC transporter involved in vitamin B12 uptake, BtuC
1 1 1 1 SCOP 55298 YjgF-like
1 1 1 1 SCOP 54060 His-Me finger endonucleases
1 1 1 0 SCOP 64307 SirA-like
1 1 1 1 SCOP 69721 DsrC, the gamma subunit of dissimilatory sulfite reductase
1 1 1 0 SCOP 55129 Ribosomal protein L30p/L7e
1 1 1 0 SCOP 46561 Ribosomal protein L29 (L29p)
1 1 1 0 SCOP 54995 Ribosomal protein S6
1 1 1 0 SCOP 49764 HSP20-like chaperones
1 1 1 1 SCOP 56104 SAICAR synthase-like
1 1 1 0 SCOP 50182 Sm-like ribonucleoproteins
1 1 1 0 SCOP 63829 Calcium-dependent phosphotriesterase
1 1 1 1 SCOP 51430 NAD(P)-linked oxidoreductase
1 1 1 1 SCOP 69500 DTD-like
1 1 1 0 SCOP 47226 Histidine-containing phosphotransfer domain, HPT domain
1 1 1 0 SCOP 48317 Acid phosphatase/Vanadium-dependent haloperoxidase
1 1 1 1 SCOP 88723 PIN domain-like
1 1 1 0 SCOP 46626 Cytochrome c
1 1 1 0 SCOP 54427 NTF2-like
1 1 1 0 SCOP 52499 Isochorismatase-like hydrolases
1 1 1 0 SCOP 69572 Activating enzymes of the ubiquitin-like proteins
1 1 1 1 SCOP 53774 Glutaminase/Asparaginase
1 1 1 1 SCOP 56752 D-aminoacid aminotransferase-like PLP-dependent enzymes
1 1 1 0 SCOP 74650 Galactose mutarotase-like
1 1 1 0 SCOP 47819 HRDC-like
1 1 1 0 SCOP 49899 Concanavalin A-like lectins/glucanases
1 1 1 0 SCOP 53639 AraD/HMP-PK domain-like
1 1 1 0 SCOP 51197 Clavaminate synthase-like
1 1 1 0 SCOP 110849 ParB/Sulfiredoxin
1 1 1 1 SCOP 82282 Homocysteine S-methyltransferase
1 1 1 0 SCOP 81343 Fumarate reductase respiratory complex transmembrane subunits
1 1 1 0 SCOP 55257 RBP11-like subunits of RNA polymerase
1 1 1 0 SCOP 56529 FAH
1 1 1 0 SCOP 55159 eIF1-like
1 1 1 0 SCOP 55961 Bet v1-like
1 1 1 0 SCOP 69618 HemD-like
1 1 1 1 SCOP 143447 AMMECR1-like
1 1 1 0 SCOP 52788 Phosphotyrosine protein phosphatases I
1 1 1 0 SCOP 141734 HisI-like
1 1 1 0 SCOP 144091 Rhomboid-like
1 1 1 0 SCOP 101478 ADP-ribosylglycohydrolase
1 1 1 0 SCOP 49478 Cna protein B-type domain
1 1 1 1 SCOP 111038 YjbQ-like
1 1 1 0 SCOP 69118 AhpD-like
1 1 1 0 SCOP 143243 Nqo5-like
1 1 1 1 SCOP 53795 PEP carboxykinase-like
1 1 1 0 SCOP 141571 Pentapeptide repeat-like
1 1 1 0 SCOP 54909 Dimeric alpha+beta barrel
1 1 1 1 SCOP 52255 N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE)
1 1 1 1 SCOP 142754 NadA-like
1 1 1 1 SCOP 56266 DmpA/ArgJ-like
1 1 1 0 SCOP 143100 TTHA1013/TTHA0281-like
1 1 1 0 SCOP 82771 GIY-YIG endonuclease
1 1 1 0 SCOP 82697 PurS-like
1 1 1 0 SCOP 53807 "Helical backbone" metal receptor
1 1 1 1 SCOP 55083 6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase, HPPK
1 1 1 0 SCOP 46767 Methylated DNA-protein cysteine methyltransferase, C-terminal domain
1 1 1 1 SCOP 50692 ADC-like
1 1 1 0 SCOP 55166 Hedgehog/DD-peptidase
1 1 1 0 SCOP 50118 Cell growth inhibitor/plasmid maintenance toxic component
1 1 1 1 SCOP 64167 SurE-like
1 1 1 0 SCOP 158682 TerB-like
1 1 1 1 SCOP 117782 YbjQ-like
1 1 1 1 SCOP 63892 Pyridoxine 5'-phosphate synthase
1 1 1 0 SCOP 55154 CYTH-like phosphatases
1 1 1 1 SCOP 81340 Clc chloride channel
1 1 1 0 SCOP 56762 HydB/Nqo4-like
1 1 1 0 SCOP 116842 XseB-like
1 1 1 0 SCOP 53218 Molybdenum cofactor biosynthesis proteins
1 1 1 0 SCOP 54736 ClpS-like
1 1 1 1 SCOP 111304 Recombination protein RecR
1 1 1 0 SCOP 50800 PK beta-barrel domain-like
1 1 1 0 SCOP 54786 YcfA/nrd intein domain
1 1 1 0 SCOP 159894 YgaC/TfoX-N like
1 1 1 1 SCOP 53732 Aconitase iron-sulfur domain
1 1 1 0 SCOP 55200 Translation initiation factor IF3, C-terminal domain
1 1 1 1 SCOP 143081 BB1717-like
1 1 1 0 SCOP 102829 Cell division protein ZapA-like
1 1 1 1 SCOP 48173 Cryptochrome/photolyase FAD-binding domain
1 1 1 1 SCOP 52425 Cryptochrome/photolyase, N-terminal domain
1 1 1 1 SCOP 89028 Cobalamin adenosyltransferase-like
1 1 1 0 SCOP 81330 Gated mechanosensitive channel
1 1 1 0 SCOP 55826 YbaK/ProRS associated domain
1 1 1 0 SCOP 102588 LmbE-like
1 1 1 1 SCOP 103025 Folate-binding domain
1 1 1 1 SCOP 140478 LemA-like
1 1 1 0 SCOP 48295 TrpR-like
1 1 1 0 SCOP 143631 ApbE-like
1 1 1 0 SCOP 101262 Methenyltetrahydrofolate cyclohydrolase-like
1 1 1 1 SCOP 56821 Prismane protein-like
1 1 1 0 SCOP 143430 TTP0101/SSO1404-like
1 1 1 0 SCOP 117457 FumA C-terminal domain-like
1 1 1 1 SCOP 161070 SNF-like
1 1 1 1 SCOP 56507 Methionine synthase activation domain-like
1 1 1 1 SCOP 110738 Glycerate kinase I
1 1 1 1 SCOP 111326 Urocanase
1 1 1 0 SCOP 50486 FMT C-terminal domain-like
1 1 1 0 SCOP 69754 Ribosome binding protein Y (YfiA homologue)
1 1 1 1 SCOP 110395 CutC-like
1 1 1 0 SCOP 50974 Nitrous oxide reductase, N-terminal domain
1 1 1 1 SCOP 75005 Arabinanase/levansucrase/invertase
1 1 1 0 SCOP 55136 Probable bacterial effector-binding domain
1 1 1 1 SCOP 56091 DNA ligase/mRNA capping enzyme, catalytic domain
1 1 1 0 SCOP 109709 KorB DNA-binding domain-like
1 1 1 0 SCOP 160631 SMI1/KNR4-like
1 1 1 0 SCOP 50346 PRC-barrel domain
1 1 1 0 SCOP 49367 Superoxide reductase-like
1 1 1 1 SCOP 52490 Tubulin nucleotide-binding domain-like
1 1 1 1 SCOP 52777 CoA-dependent acyltransferases
1 1 1 1 SCOP 50465 EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain
1 1 1 0 SCOP 69864 Argininosuccinate synthetase, C-terminal domain
1 1 1 0 SCOP 48024 N-terminal domain of DnaB helicase
1 1 1 0 SCOP 143865 CorA soluble domain-like
1 1 1 1 SCOP 158832 Tex N-terminal region-like
1 1 1 1 SCOP 48592 GroEL equatorial domain-like
1 1 1 1 SCOP 56712 Prokaryotic type I DNA topoisomerase
1 1 1 0 SCOP 52200 Toll/Interleukin receptor TIR domain
1 1 1 1 SCOP 51690 Nicotinate/Quinolinate PRTase C-terminal domain-like
1 1 1 0 SCOP 51246 Rudiment single hybrid motif
1 1 1 0 SCOP 57938 DnaJ/Hsp40 cysteine-rich domain
1 1 1 0 SCOP 81923 Double Clp-N motif
1 1 1 0 SCOP 82114 Riboflavin kinase-like
1 1 1 0 SCOP 46906 Ribosomal protein L11, C-terminal domain
1 1 1 0 SCOP 160443 SMR domain-like
1 1 1 0 SCOP 69304 Tricorn protease N-terminal domain
1 1 1 1 SCOP 102645 CoaB-like
1 1 1 0 SCOP 49344 CBD9-like
1 1 1 0 SCOP 56014 Nitrite and sulphite reductase 4Fe-4S domain-like
1 1 1 0 SCOP 159941 MM3350-like
1 1 1 0 SCOP 47188 Hemerythrin-like
1 1 1 1 SCOP 54821 Ribosomal protein S3 C-terminal domain
1 1 1 0 SCOP 52935 PK C-terminal domain-like
1 1 1 1 SCOP 52009 Phosphohistidine domain
1 1 1 0 SCOP 109635 DnaK suppressor protein DksA, alpha-hairpin domain
1 1 1 0 SCOP 118116 DNA mismatch repair protein MutL
1 1 1 0 SCOP 81336 F1F0 ATP synthase subunit A
1 1 1 0 SCOP 47789 C-terminal domain of RNA polymerase alpha subunit
1 1 1 0 SCOP 51344 Epsilon subunit of F1F0-ATP synthase N-terminal domain
1 1 1 0 SCOP 55658 L9 N-domain-like
1 1 1 1 SCOP 68923 PEP carboxykinase N-terminal domain
1 1 1 0 SCOP 55190 Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain
1 1 1 0 SCOP 69055 1-deoxy-D-xylulose-5-phosphate reductoisomerase, C-terminal domain
1 1 1 0 SCOP 49373 Invasin/intimin cell-adhesion fragments
1 1 1 0 SCOP 51215 Regulatory protein AraC
1 1 1 0 SCOP 58014 Coiled-coil domain of nucleotide exchange factor GrpE
1 1 1 0 SCOP 63999 Thiamin pyrophosphokinase, catalytic domain
1 1 1 0 SCOP 55307 Tubulin C-terminal domain-like
1 1 1 1 SCOP 140990 FtsH protease domain-like
1 1 1 1 SCOP 54719 Fe,Mn superoxide dismutase (SOD), C-terminal domain
1 1 1 0 SCOP 48163 An anticodon-binding domain of class I aminoacyl-tRNA synthetases
1 1 1 1 SCOP 52021 Carbamoyl phosphate synthetase, small subunit N-terminal domain
1 1 1 0 SCOP 117074 Hypothetical protein PA1324
1 1 1 1 SCOP 52029 GroEL apical domain-like
1 1 1 0 SCOP 81891 Poly A polymerase C-terminal region-like
1 1 1 0 SCOP 68912 Rho N-terminal domain-like
1 1 1 1 SCOP 54810 GMP synthetase C-terminal dimerisation domain
1 1 1 1 SCOP 101904 GyrA/ParC C-terminal domain-like
1 1 1 0 SCOP 57825 Aspartate carbamoyltransferase, Regulatory-chain, C-terminal domain
1 1 1 0 SCOP 57863 ArfGap/RecO-like zinc finger
1 1 1 0 SCOP 143548 Serine metabolism enzymes domain
1 1 1 0 SCOP 52279 Beta-D-glucan exohydrolase, C-terminal domain
1 1 1 0 SCOP 47364 Domain of the SRP/SRP receptor G-proteins
1 1 1 0 SCOP 48300 Ribosomal protein L7/12, oligomerisation (N-terminal) domain
1 1 1 0 SCOP 63737 Leukotriene A4 hydrolase N-terminal domain
1 1 1 1 SCOP 100920 Heat shock protein 70kD (HSP70), peptide-binding domain
1 1 1 0 SCOP 110997 Sporulation related repeat
1 1 1 0 SCOP 49354 PapD-like
1 1 1 0 SCOP 144083 Magnesium transport protein CorA, transmembrane region
1 1 1 0 SCOP 46934 UBA-like
1 1 1 0 SCOP 160240 Cation efflux protein cytoplasmic domain-like
1 1 1 1 SCOP 56327 LDH C-terminal domain-like
1 1 1 0 SCOP 110921 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain
1 1 1 0 SCOP 54768 dsRNA-binding domain-like
1 1 1 0 SCOP 52113 BRCT domain
1 1 1 0 SCOP 141259 CarD-like
1 1 1 0 SCOP 53155 Methylated DNA-protein cysteine methyltransferase domain
1 1 1 0 SCOP 54373 FAD-linked reductases, C-terminal domain
1 1 1 0 SCOP 75420 YhbC-like, N-terminal domain
1 1 1 0 SCOP 54752 RecA protein, C-terminal domain
1 1 1 0 SCOP 101852 Bacterial fluorinating enzyme, C-terminal domain
1 1 1 0 SCOP 102735 Trigger factor ribosome-binding domain
1 1 1 1 SCOP 143975 IlvD/EDD N-terminal domain-like
1 1 1 0 SCOP 159283 Guanosine diphospho-D-mannose pyrophosphorylase/mannose-6-phosphate isomerase linker domain
1 1 1 0 SCOP 46557 GreA transcript cleavage protein, N-terminal domain
1 1 1 0 SCOP 54675 Nicotinate/Quinolinate PRTase N-terminal domain-like
1 1 1 0 SCOP 47807 5' to 3' exonuclease, C-terminal subdomain
1 1 1 1 SCOP 47446 Signal peptide-binding domain
1 1 1 0 SCOP 54991 Anticodon-binding domain of PheRS
1 1 1 1 SCOP 55271 DNA repair protein MutS, domain I
1 1 1 0 SCOP 102522 Bacterial fluorinating enzyme, N-terminal domain
1 1 1 0 SCOP 55048 Probable ACP-binding domain of malonyl-CoA ACP transacylase
1 1 1 0 SCOP 47928 N-terminal domain of the delta subunit of the F1F0-ATP synthase
1 1 1 0 SCOP 48108 Carbamoyl phosphate synthetase, large subunit connection domain
1 1 1 1 SCOP 82051 Obg GTP-binding protein N-terminal domain
1 1 1 0 SCOP 52025 PA domain
1 1 1 0 SCOP 88688 Families 57/38 glycoside transferase middle domain
1 1 1 0 SCOP 54368 Glutamine synthetase, N-terminal domain
1 1 1 0 SCOP 55261 GAD domain-like
1 1 1 0 SCOP 54713 Elongation factor Ts (EF-Ts), dimerisation domain
1 1 1 1 SCOP 64158 2,3-Bisphosphoglycerate-independent phosphoglycerate mutase, substrate-binding domain
1 1 1 1 SCOP 54747 Ribosomal L11/L12e N-terminal domain
1 1 1 0 SCOP 46609 Fe,Mn superoxide dismutase (SOD), N-terminal domain
1 1 1 0 SCOP 81886 Helical scaffold and wing domains of SecA
1 1 1 0 SCOP 54849 GroEL-intermediate domain like
1 1 1 1 SCOP 56194 Uridine diphospho-N-Acetylenolpyruvylglucosamine reductase, MurB, C-terminal domain
1 1 1 0 SCOP 89000 post-HMGL domain-like
1 1 1 0 SCOP 52156 Initiation factor IF2/eIF5b, domain 3
1 1 1 0 SCOP 116878 TrmE connector domain
1 1 1 0 SCOP 64586 C-terminal domain of ProRS
1 1 1 0 SCOP 51064 Head domain of nucleotide exchange factor GrpE
1 1 1 0 SCOP 47005 Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex
1 1 1 0 SCOP 55653 Ribosomal protein L9 C-domain
1 1 1 0 SCOP 101790 Aminomethyltransferase beta-barrel domain
1 1 1 0 SCOP 143517 TRCF domain-like
1 1 1 1 SCOP 101353 Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS)
1 1 1 0 SCOP 56553 Insert subdomain of RNA polymerase alpha subunit
1 1 1 1 SCOP 47644 Methionine synthase domain
1 1 1 0 SCOP 46929 DNA helicase RuvA subunit, C-terminal domain
1 1 1 0 SCOP 54893 Aspartate carbamoyltransferase, Regulatory-chain, N-terminal domain
1 1 1 0 SCOP 54364 Translation initiation factor IF3, N-terminal domain
1 1 1 0 SCOP 69705 Transcription factor NusA, N-terminal domain
1 1 1 0 SCOP 53150 DNA repair protein MutS, domain II
1 1 1 0 SCOP 81767 Pre-protein crosslinking domain of SecA
1 1 1 0 SCOP 81799 Putative methyltransferase TM0872, insert domain
1 1 1 0 SCOP 46915 Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3
1 1 1 0 SCOP 109736 FGAM synthase PurL, linker domain
1 1 1 0 SCOP 160996 HI0933 insert domain-like
1 1 1 1 SCOP 158494 PG0775 C-terminal domain-like
1 1 1 0 SCOP 57770 Methionyl-tRNA synthetase (MetRS), Zn-domain
1 1 1 0 SCOP 117778 D-lysine 5,6-aminomutase beta subunit KamE, N-terminal domain

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