SUPERFAMILY 1.75 HMM library and genome assignments server

Linepithema humile v1.1 superfamily assignments

Taxonomy
Taxonomy browser entry

Eukaryota; Opisthokonta; Metazoa; Eumetazoa; Bilateria; Protostomia; Ecdysozoa; Panarthropoda; Arthropoda; Mandibulata; Pancrustacea; Hexapoda; Insecta; Dicondylia; Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita; Aculeata; Vespoidea; Formicidae; Dolichoderinae; Linepithema; Linepithema humile

Downloads
Fasta format sequences
Domain assignments


Jump to [ Top of page · Domain assignments ]

Assignment statistics

Sequences: 16177 total
8076 (50 %) with assignment
402 average length
35 % amino acid coverage
Domains: 13585 total
989 unique superfamilies
871 unique families
283 average length
13.7 average superfamily size
93 % formed by duplication
Domain combinations: 1101 domain pairs
3260 unique architectures

Jump to [ Top of page · Assignment statistics ]

Superfamily assignments

Domains

Proteins

Architectures

Families

SCOP link

Superfamilies