SUPERFAMILY 1.75 HMM library and genome assignments server

Solanum lycopersicum v.2.3 superfamily assignments

Taxonomy
Taxonomy browser entry

Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum; Lycopersicon; Solanum lycopersicum

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Domain assignments


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Assignment statistics

Sequences: 34727 total
18730 (54 %) with assignment
344 average length
43 % amino acid coverage
Domains: 25836 total
996 unique superfamilies
826 unique families
276 average length
25.9 average superfamily size
96 % formed by duplication
Domain combinations: 1010 domain pairs
3473 unique architectures

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Superfamily assignments

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