SUPERFAMILY 1.75 HMM library and genome assignments server

Oryza sativa ssp. japonica 5.0 superfamily assignments

Taxonomy
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Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BEP clade; Ehrhartoideae; Oryzeae; Oryza; Oryza sativa; Oryza sativa Japonica Group

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Assignment statistics

Sequences: 67393 total
33278 (49 %) with assignment
445 average length
39 % amino acid coverage
Domains: 52253 total
978 unique superfamilies
811 unique families
352 average length
53.4 average superfamily size
98 % formed by duplication
Domain combinations: 1092 domain pairs
4087 unique architectures

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Superfamily assignments

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