SUPERFAMILY 1.75 HMM library and genome assignments server

Arabidopsis lyrata superfamily assignments

Taxonomy
Taxonomy browser entry

Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis; Arabidopsis lyrata

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Fasta format sequences
Domain assignments


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Assignment statistics

Sequences: 32670 total
18324 (56 %) with assignment
360 average length
44 % amino acid coverage
Domains: 25968 total
968 unique superfamilies
816 unique families
281 average length
26.8 average superfamily size
96 % formed by duplication
Domain combinations: 1019 domain pairs
3395 unique architectures

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Superfamily assignments

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Proteins

Architectures

Families

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Superfamilies