SUPERFAMILY 1.75 HMM library and genome assignments server

Neisseria lactamica 020-06 superfamily assignments

Taxonomy
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Bacteria; Proteobacteria; Betaproteobacteria; Neisseriales; Neisseriaceae; Neisseria; Neisseria lactamica; Neisseria lactamica 020-06

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Domain assignments


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Assignment statistics

Sequences: 1972 total
1322 (67 %) with assignment
309 average length
63 % amino acid coverage
Domains: 1939 total
625 unique superfamilies
500 unique families
289 average length
3.1 average superfamily size
68 % formed by duplication
Domain combinations: 350 domain pairs
779 unique architectures

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Superfamily assignments

Domains

Proteins

Architectures

Families

SCOP link

Superfamilies

154 134 54 8 SCOP 52540 P-loop containing nucleoside triphosphate hydrolases
45 45 9 11 SCOP 53335 S-adenosyl-L-methionine-dependent methyltransferases
44 43 21 7 SCOP 51735 NAD(P)-binding Rossmann-fold domains
37 28 21 4 SCOP 50249 Nucleic acid-binding proteins
24 23 10 2 SCOP 46785 "Winged helix" DNA-binding domain
21 21 6 4 SCOP 53098 Ribonuclease H-like
20 20 7 2 SCOP 52833 Thioredoxin-like
20 12 9 3 SCOP 53067 Actin-like ATPase domain
19 19 4 1 SCOP 53850 Periplasmic binding protein-like II
19 16 15 6 SCOP 54211 Ribosomal protein S5 domain 2-like
19 18 8 0 SCOP 46689 Homeodomain-like
17 16 2 4 SCOP 53383 PLP-dependent transferases
17 2 2 1 SCOP 101999 Trimeric adhesin
16 16 10 3 SCOP 51905 FAD/NAD(P)-binding domain
16 16 10 3 SCOP 52374 Nucleotidylyl transferase
15 15 4 1 SCOP 56935 Porins
14 12 3 1 SCOP 161098 MetI-like
14 12 3 1 SCOP 56925 OMPA-like
13 13 6 4 SCOP 52402 Adenine nucleotide alpha hydrolases-like
13 13 11 2 SCOP 55681 Class II aaRS and biotin synthetases
13 13 5 1 SCOP 51126 Pectin lyase-like
12 12 2 3 SCOP 53448 Nucleotide-diphospho-sugar transferases
12 12 2 1 SCOP 103473 MFS general substrate transporter
12 11 4 0 SCOP 48452 TPR-like
12 11 8 2 SCOP 50447 Translation proteins
12 8 5 0 SCOP 103481 Multidrug resistance efflux transporter EmrE
12 9 8 0 SCOP 55021 ACT-like
11 11 3 3 SCOP 56784 HAD-like
10 9 6 3 SCOP 56059 Glutathione synthetase ATP-binding domain-like
10 10 3 3 SCOP 53474 alpha/beta-Hydrolases
10 5 4 4 SCOP 52518 Thiamin diphosphate-binding fold (THDP-binding)
10 6 6 0 SCOP 46626 Cytochrome c
10 10 7 1 SCOP 54523 Pili subunits
10 5 5 0 SCOP 101967 Adhesin YadA, collagen-binding domain
9 9 2 4 SCOP 51569 Aldolase
9 9 4 3 SCOP 55120 Pseudouridine synthase
9 9 3 1 SCOP 55174 Alpha-L RNA-binding motif
9 9 7 1 SCOP 54534 FKBP-like
9 9 3 0 SCOP 47413 lambda repressor-like DNA-binding domains
9 8 5 3 SCOP 81301 Nucleotidyltransferase
8 8 3 2 SCOP 53271 PRTase-like
8 8 4 5 SCOP 51161 Trimeric LpxA-like enzymes
8 8 7 0 SCOP 54862 4Fe-4S ferredoxins
8 8 1 2 SCOP 53756 UDP-Glycosyltransferase/glycogen phosphorylase
8 8 2 2 SCOP 102114 Radical SAM enzymes
8 8 4 1 SCOP 55729 Acyl-CoA N-acyltransferases (Nat)
8 8 4 3 SCOP 55347 Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
7 7 6 1 SCOP 52317 Class I glutamine amidotransferase-like
7 7 1 4 SCOP 51366 Ribulose-phoshate binding barrel
7 7 4 4 SCOP 75217 alpha/beta knot
7 7 4 1 SCOP 52980 Restriction endonuclease-like
7 7 4 2 SCOP 54292 2Fe-2S ferredoxin-like
7 7 2 2 SCOP 54637 Thioesterase/thiol ester dehydrase-isomerase
7 7 7 1 SCOP 55874 ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
7 6 6 1 SCOP 51230 Single hybrid motif
7 7 5 3 SCOP 53955 Lysozyme-like
7 6 6 1 SCOP 47781 RuvA domain 2-like
7 4 3 1 SCOP 54980 EF-G C-terminal domain-like
7 6 3 2 SCOP 52440 PreATP-grasp domain
7 6 4 3 SCOP 63380 Riboflavin synthase domain-like
6 6 2 1 SCOP 56112 Protein kinase-like (PK-like)
6 6 4 3 SCOP 53697 SIS domain
6 6 4 1 SCOP 57716 Glucocorticoid receptor-like (DNA-binding domain)
6 6 4 1 SCOP 100950 NagB/RpiA/CoA transferase-like
6 5 3 1 SCOP 50129 GroES-like
6 6 2 2 SCOP 53720 ALDH-like
6 6 2 3 SCOP 52096 ClpP/crotonase
6 6 5 1 SCOP 109604 HD-domain/PDEase-like
6 6 3 1 SCOP 54909 Dimeric alpha+beta barrel
6 4 3 2 SCOP 53901 Thiolase-like
6 6 4 1 SCOP 103515 Autotransporter
6 6 1 0 SCOP 160631 SMI1/KNR4-like
6 6 2 4 SCOP 48179 6-phosphogluconate dehydrogenase C-terminal domain-like
6 6 3 1 SCOP 53244 MurD-like peptide ligases, peptide-binding domain
6 4 3 1 SCOP 82866 Multidrug efflux transporter AcrB transmembrane domain
6 4 4 0 SCOP 50156 PDZ domain-like
6 6 4 3 SCOP 56176 FAD-binding/transporter-associated domain-like
6 6 5 1 SCOP 47323 Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
6 6 3 2 SCOP 53623 MurD-like peptide ligases, catalytic domain
6 2 1 1 SCOP 53738 Phosphoglucomutase, first 3 domains
5 5 4 2 SCOP 50104 Translation proteins SH3-like domain
5 5 3 5 SCOP 53659 Isocitrate/Isopropylmalate dehydrogenase-like
5 5 4 2 SCOP 53633 Carbamate kinase-like
5 5 5 3 SCOP 51621 Phosphoenolpyruvate/pyruvate domain
5 5 3 0 SCOP 55811 Nudix
5 5 1 1 SCOP 51395 FMN-linked oxidoreductases
5 5 3 0 SCOP 52172 CheY-like
5 5 5 2 SCOP 56601 beta-lactamase/transpeptidase-like
5 2 2 0 SCOP 81901 HCP-like
5 5 3 2 SCOP 52343 Ferredoxin reductase-like, C-terminal NADP-linked domain
5 5 1 4 SCOP 53223 Aminoacid dehydrogenase-like, N-terminal domain
4 4 2 0 SCOP 56300 Metallo-dependent phosphatases
4 4 2 2 SCOP 47240 Ferritin-like
4 4 1 1 SCOP 47729 IHF-like DNA-binding proteins
4 4 4 1 SCOP 109998 Triger factor/SurA peptide-binding domain-like
4 4 4 2 SCOP 55486 Metalloproteases ("zincins"), catalytic domain
4 4 1 1 SCOP 48557 L-aspartase-like
4 4 3 1 SCOP 53686 Tryptophan synthase beta subunit-like PLP-dependent enzymes
4 4 1 1 SCOP 48576 Terpenoid synthases
4 4 3 2 SCOP 53187 Zn-dependent exopeptidases
4 4 3 0 SCOP 54631 CBS-domain pair
4 4 3 0 SCOP 46955 Putative DNA-binding domain
4 4 3 2 SCOP 52016 LeuD/IlvD-like
4 3 3 0 SCOP 57783 Zinc beta-ribbon
4 4 4 1 SCOP 56349 DNA breaking-rejoining enzymes
4 3 3 3 SCOP 49503 Cupredoxins
4 4 3 3 SCOP 52467 DHS-like NAD/FAD-binding domain
4 3 2 0 SCOP 116734 DNA methylase specificity domain
4 3 2 1 SCOP 111369 HlyD-like secretion proteins
4 4 4 1 SCOP 88697 PUA domain-like
4 3 2 0 SCOP 88659 Sigma3 and sigma4 domains of RNA polymerase sigma factors
4 3 3 1 SCOP 54814 Prokaryotic type KH domain (KH-domain type II)
4 2 2 1 SCOP 56024 Phospholipase D/nuclease
4 3 3 0 SCOP 54106 LysM domain
4 4 4 1 SCOP 56719 Type II DNA topoisomerase
4 3 2 1 SCOP 56042 PurM C-terminal domain-like
4 3 2 1 SCOP 55326 PurM N-terminal domain-like
4 4 3 1 SCOP 81271 TGS-like
3 3 1 2 SCOP 51556 Metallo-dependent hydrolases
3 3 3 2 SCOP 53927 Cytidine deaminase-like
3 3 3 1 SCOP 53790 Tetrapyrrole methylase
3 3 1 1 SCOP 53613 Ribokinase-like
3 3 2 1 SCOP 52141 Uracil-DNA glycosylase-like
3 3 1 0 SCOP 69593 Glycerol-3-phosphate (1)-acyltransferase
3 3 2 1 SCOP 52218 Flavoproteins
3 3 1 1 SCOP 143800 L28p-like
3 3 1 0 SCOP 47336 ACP-like
3 3 2 2 SCOP 55821 YrdC/RibB
3 3 3 0 SCOP 51261 Duplicated hybrid motif
3 3 2 1 SCOP 56281 Metallo-hydrolase/oxidoreductase
3 3 1 1 SCOP 56655 Carbohydrate phosphatase
3 3 1 1 SCOP 81345 ABC transporter involved in vitamin B12 uptake, BtuC
3 3 2 1 SCOP 51419 PLP-binding barrel
3 3 3 1 SCOP 56235 N-terminal nucleophile aminohydrolases (Ntn hydrolases)
3 3 3 0 SCOP 50182 Sm-like ribonucleoproteins
3 3 2 2 SCOP 50475 FMN-binding split barrel
3 3 2 1 SCOP 56801 Acetyl-CoA synthetase-like
3 3 1 1 SCOP 55469 FMN-dependent nitroreductase-like
3 2 2 2 SCOP 51726 UROD/MetE-like
3 3 2 2 SCOP 88723 PIN domain-like
3 3 2 0 SCOP 53649 Alkaline phosphatase-like
3 3 2 1 SCOP 51306 LexA/Signal peptidase
3 1 1 0 SCOP 47819 HRDC-like
3 3 1 2 SCOP 52972 ITPase-like
3 3 1 0 SCOP 110849 ParB/Sulfiredoxin
3 3 3 0 SCOP 55008 HMA, heavy metal-associated domain
3 3 2 0 SCOP 52266 SGNH hydrolase
3 3 2 1 SCOP 52283 Formate/glycerate dehydrogenase catalytic domain-like
3 3 1 0 SCOP 55620 Tetrahydrobiopterin biosynthesis enzymes-like
3 3 3 1 SCOP 52954 Class II aaRS ABD-related
3 3 2 0 SCOP 82771 GIY-YIG endonuclease
3 3 2 1 SCOP 88946 Sigma2 domain of RNA polymerase sigma factors
3 3 1 0 SCOP 89392 Prokaryotic lipoproteins and lipoprotein localization factors
3 3 1 1 SCOP 161070 SNF-like
3 2 2 1 SCOP 81593 Nucleotidyltransferase substrate binding subunit/domain
3 3 1 0 SCOP 50331 MOP-like
3 3 1 0 SCOP 109709 KorB DNA-binding domain-like
3 3 3 1 SCOP 46565 Chaperone J-domain
3 3 2 1 SCOP 46548 alpha-helical ferredoxin
3 3 1 1 SCOP 50465 EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain
3 3 3 1 SCOP 55424 FAD/NAD-linked reductases, dimerisation (C-terminal) domain
3 3 2 1 SCOP 90123 ABC transporter transmembrane region
3 3 2 0 SCOP 46589 tRNA-binding arm
3 1 1 0 SCOP 55979 DNA clamp
3 3 1 1 SCOP 51246 Rudiment single hybrid motif
3 3 2 1 SCOP 55103 FAD-linked oxidases, C-terminal domain
3 2 2 1 SCOP 56014 Nitrite and sulphite reductase 4Fe-4S domain-like
3 3 2 0 SCOP 82185 Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain
3 3 3 0 SCOP 47384 Homodimeric domain of signal transducing histidine kinase
3 3 2 1 SCOP 48019 post-AAA+ oligomerization domain-like
3 3 2 1 SCOP 52922 TK C-terminal domain-like
3 1 1 1 SCOP 55973 S-adenosylmethionine synthetase
3 3 3 0 SCOP 158472 HAMP domain-like
3 3 3 1 SCOP 52210 Succinyl-CoA synthetase domains
3 2 2 0 SCOP 116726 TrkA C-terminal domain-like
3 3 3 0 SCOP 51294 Hedgehog/intein (Hint) domain
3 3 3 1 SCOP 56425 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain
3 3 1 1 SCOP 51984 MurCD N-terminal domain
3 3 2 1 SCOP 50677 ValRS/IleRS/LeuRS editing domain
3 1 1 1 SCOP 82693 Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains
3 2 2 1 SCOP 55666 Ribonuclease PH domain 2-like
2 2 2 0 SCOP 48013 NusB-like
2 2 1 0 SCOP 57829 Zn-binding ribosomal proteins
2 2 1 1 SCOP 54197 HIT-like
2 2 1 1 SCOP 53137 Translational machinery components
2 2 2 1 SCOP 55920 Creatinase/aminopeptidase
2 2 2 1 SCOP 46946 S13-like H2TH domain
2 2 2 0 SCOP 56214 4'-phosphopantetheinyl transferase
2 2 2 2 SCOP 53597 Dihydrofolate reductase-like
2 2 1 1 SCOP 75620 Release factor
2 2 2 2 SCOP 64484 beta and beta-prime subunits of DNA dependent RNA-polymerase
2 2 2 2 SCOP 51730 FAD-linked oxidoreductase
2 2 1 0 SCOP 52821 Rhodanese/Cell cycle control phosphatase
2 2 2 1 SCOP 111283 Putative modulator of DNA gyrase, PmbA/TldD
2 2 1 1 SCOP 51283 dUTPase-like
2 2 1 1 SCOP 48150 DNA-glycosylase
2 2 1 1 SCOP 89360 HesB-like domain
2 2 2 1 SCOP 50715 Ribosomal protein L25-like
2 2 2 1 SCOP 51412 Inosine monophosphate dehydrogenase (IMPDH)
2 2 1 0 SCOP 54285 MoaD/ThiS
2 2 2 1 SCOP 142695 RibA-like
2 2 1 1 SCOP 55205 EPT/RTPC-like
2 2 1 1 SCOP 55298 YjgF-like
2 2 1 0 SCOP 82657 BolA-like
2 2 2 1 SCOP 50685 Barwin-like endoglucanases
2 2 1 0 SCOP 55315 L30e-like
2 2 2 2 SCOP 56672 DNA/RNA polymerases
2 2 1 1 SCOP 50891 Cyclophilin-like
2 2 2 1 SCOP 53328 Formyltransferase
2 2 2 1 SCOP 54427 NTF2-like
2 2 2 1 SCOP 56322 ADC synthase
2 2 1 0 SCOP 54001 Cysteine proteinases
2 2 1 0 SCOP 48403 Ankyrin repeat
2 2 2 2 SCOP 51445 (Trans)glycosidases
2 2 1 1 SCOP 69572 Activating enzymes of the ubiquitin-like proteins
2 2 2 1 SCOP 56752 D-aminoacid aminotransferase-like PLP-dependent enzymes
2 2 2 1 SCOP 74650 Galactose mutarotase-like
2 2 2 0 SCOP 56317 Carbon-nitrogen hydrolase
2 2 2 1 SCOP 51182 RmlC-like cupins
2 2 2 1 SCOP 55781 GAF domain-like
2 2 1 0 SCOP 81343 Fumarate reductase respiratory complex transmembrane subunits
2 2 2 1 SCOP 52151 FabD/lysophospholipase-like
2 2 2 0 SCOP 81442 Cytochrome c oxidase subunit I-like
2 2 2 2 SCOP 55931 Glutamine synthetase/guanido kinase
2 2 2 1 SCOP 81342 Transmembrane di-heme cytochromes
2 2 1 0 SCOP 69118 AhpD-like
2 2 2 1 SCOP 102405 MCP/YpsA-like
2 2 2 0 SCOP 103642 Sec-C motif
2 2 2 2 SCOP 51998 PFL-like glycyl radical enzymes
2 2 1 1 SCOP 47598 Ribbon-helix-helix
2 2 1 2 SCOP 53807 "Helical backbone" metal receptor
2 2 2 0 SCOP 89550 PHP domain-like
2 2 2 1 SCOP 50692 ADC-like
2 2 2 1 SCOP 52507 Homo-oligomeric flavin-containing Cys decarboxylases, HFCD
2 2 1 1 SCOP 81340 Clc chloride channel
2 2 1 0 SCOP 46894 C-terminal effector domain of the bipartite response regulators
2 2 2 0 SCOP 54736 ClpS-like
2 2 2 1 SCOP 53732 Aconitase iron-sulfur domain
2 2 1 1 SCOP 56219 DNase I-like
2 2 2 1 SCOP 89095 GatB/YqeY motif
2 2 2 0 SCOP 55826 YbaK/ProRS associated domain
2 2 2 0 SCOP 56645 Acyl-CoA dehydrogenase NM domain-like
2 2 2 1 SCOP 103025 Folate-binding domain
2 2 2 1 SCOP 52335 Methylglyoxal synthase-like
2 2 1 1 SCOP 143631 ApbE-like
2 2 1 0 SCOP 143430 TTP0101/SSO1404-like
2 2 2 1 SCOP 56091 DNA ligase/mRNA capping enzyme, catalytic domain
2 2 2 1 SCOP 55186 ThrRS/AlaRS common domain
2 2 2 1 SCOP 52777 CoA-dependent acyltransferases
2 2 1 0 SCOP 47616 GST C-terminal domain-like
2 2 1 0 SCOP 48008 GntR ligand-binding domain-like
2 1 1 0 SCOP 53092 Creatinase/prolidase N-terminal domain
2 2 2 0 SCOP 52743 Subtilisin-like
2 2 1 2 SCOP 51690 Nicotinate/Quinolinate PRTase C-terminal domain-like
2 2 1 1 SCOP 160207 NMB0488-like
2 2 2 1 SCOP 81923 Double Clp-N motif
2 2 2 0 SCOP 52009 Phosphohistidine domain
2 2 2 0 SCOP 81665 Calcium ATPase, transmembrane domain M
2 1 1 1 SCOP 53681 Aspartate/glutamate racemase
2 2 2 1 SCOP 56037 PheT/TilS domain
2 2 1 1 SCOP 53671 Aspartate/ornithine carbamoyltransferase
2 2 1 0 SCOP 142984 Nqo1 middle domain-like
2 2 1 2 SCOP 50621 Alanine racemase C-terminal domain-like
2 2 1 0 SCOP 160472 NMB0513-like
2 2 1 0 SCOP 81891 Poly A polymerase C-terminal region-like
2 2 2 1 SCOP 101904 GyrA/ParC C-terminal domain-like
2 2 2 1 SCOP 46977 Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain
2 2 2 1 SCOP 100920 Heat shock protein 70kD (HSP70), peptide-binding domain
2 2 2 0 SCOP 46600 C-terminal UvrC-binding domain of UvrB
2 2 1 0 SCOP 110997 Sporulation related repeat
2 2 1 0 SCOP 63418 MurE/MurF N-terminal domain
2 2 2 0 SCOP 54768 dsRNA-binding domain-like
2 1 1 0 SCOP 47794 Rad51 N-terminal domain-like
2 1 1 1 SCOP 56053 Ribosomal protein L6
2 1 1 1 SCOP 55124 Nitrite/Sulfite reductase N-terminal domain-like
2 2 2 1 SCOP 100934 Heat shock protein 70kD (HSP70), C-terminal subdomain
2 2 1 0 SCOP 55957 Phosphoglucomutase, C-terminal domain
2 2 1 0 SCOP 140490 Nqo1C-terminal domain-like
2 1 1 0 SCOP 82714 Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains
2 2 1 1 SCOP 143975 IlvD/EDD N-terminal domain-like
2 2 1 1 SCOP 46557 GreA transcript cleavage protein, N-terminal domain
2 2 1 0 SCOP 54675 Nicotinate/Quinolinate PRTase N-terminal domain-like
2 2 1 0 SCOP 50615 N-terminal domain of alpha and beta subunits of F1 ATP synthase
2 1 1 0 SCOP 49303 beta-Galactosidase/glucuronidase domain
2 2 1 1 SCOP 142019 Nqo1 FMN-binding domain-like
2 1 1 0 SCOP 49493 HSP40/DnaJ peptide-binding domain
2 1 1 1 SCOP 54713 Elongation factor Ts (EF-Ts), dimerisation domain
2 2 2 0 SCOP 81653 Calcium ATPase, transduction domain A
2 2 1 1 SCOP 47917 C-terminal domain of alpha and beta subunits of F1 ATP synthase
2 2 2 0 SCOP 47005 Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex
1 1 1 1 SCOP 56731 DNA primase core
1 1 1 0 SCOP 55594 HPr-like
1 1 1 1 SCOP 53167 Purine and uridine phosphorylases
1 1 1 0 SCOP 74982 Small protein B (SmpB)
1 1 1 1 SCOP 56808 Ribosomal protein L1
1 1 1 1 SCOP 53178 Peptidyl-tRNA hydrolase-like
1 1 1 1 SCOP 47973 Ribosomal protein S7
1 1 1 0 SCOP 46911 Ribosomal protein S18
1 1 1 1 SCOP 75304 Amidase signature (AS) enzymes
1 1 1 1 SCOP 56420 Peptide deformylase
1 1 1 0 SCOP 142433 CinA-like
1 1 1 1 SCOP 111331 NAD kinase/diacylglycerol kinase-like
1 1 1 1 SCOP 82607 YbaB-like
1 1 1 0 SCOP 89919 Ribosome-binding factor A, RbfA
1 1 1 1 SCOP 54999 Ribosomal protein S10
1 1 1 1 SCOP 52166 Ribosomal protein L4
1 1 1 0 SCOP 54189 Ribosomal proteins S24e, L23 and L15e
1 1 1 1 SCOP 54570 Ribosomal protein S19
1 1 1 1 SCOP 54843 Ribosomal protein L22
1 1 1 1 SCOP 54686 Ribosomal protein L16p/L10e
1 1 1 1 SCOP 50193 Ribosomal protein L14
1 1 1 1 SCOP 55282 RL5-like
1 1 1 1 SCOP 56047 Ribosomal protein S8
1 1 1 1 SCOP 52080 Ribosomal proteins L15p and L18e
1 1 1 0 SCOP 103491 Preprotein translocase SecY subunit
1 1 1 0 SCOP 57840 Ribosomal protein L36
1 1 1 1 SCOP 64263 Prokaryotic ribosomal protein L17
1 1 1 1 SCOP 64182 DHH phosphoesterases
1 1 1 0 SCOP 143034 L35p-like
1 1 1 1 SCOP 74731 Ribosomal protein L20
1 1 1 0 SCOP 89447 AbrB/MazE/MraZ-like
1 1 1 1 SCOP 55831 Thymidylate synthase/dCMP hydroxymethylase
1 1 1 1 SCOP 141091 L21p-like
1 1 1 1 SCOP 110324 Ribosomal L27 protein-like
1 1 1 0 SCOP 51658 Xylose isomerase-like
1 1 1 1 SCOP 53748 Phosphoglycerate kinase
1 1 1 1 SCOP 75625 YebC-like
1 1 1 1 SCOP 82649 SufE/NifU
1 1 1 1 SCOP 50324 Inorganic pyrophosphatase
1 1 1 0 SCOP 160369 Ribosomal protein L10-like
1 1 1 0 SCOP 46992 Ribosomal protein S20
1 1 1 1 SCOP 52943 ATP synthase (F1-ATPase), gamma subunit
1 1 1 0 SCOP 81333 F1F0 ATP synthase subunit C
1 1 1 1 SCOP 55068 Peptide methionine sulfoxide reductase
1 1 1 1 SCOP 52161 Ribosomal protein L13
1 1 1 1 SCOP 47060 S15/NS1 RNA-binding domain
1 1 1 1 SCOP 82784 OsmC-like
1 1 1 1 SCOP 51351 Triosephosphate isomerase (TIM)
1 1 1 1 SCOP 55194 Ribosome recycling factor, RRF
1 1 1 1 SCOP 54565 Ribosomal protein S16
1 1 1 1 SCOP 51316 Mss4-like
1 1 1 1 SCOP 69765 IpsF-like
1 1 1 1 SCOP 54611 SecB-like
1 1 1 1 SCOP 103263 Chorismate synthase, AroC
1 1 1 1 SCOP 111337 QueA-like
1 1 1 1 SCOP 51713 tRNA-guanine transglycosylase
1 1 1 1 SCOP 56770 HydA/Nqo6-like
1 1 1 1 SCOP 52313 Ribosomal protein S2
1 1 1 1 SCOP 64005 Undecaprenyl diphosphate synthase
1 1 1 1 SCOP 102705 NIF3 (NGG1p interacting factor 3)-like
1 1 1 1 SCOP 53254 Phosphoglycerate mutase-like
1 1 1 0 SCOP 55229 Cell division protein MinE topological specificity domain
1 1 1 0 SCOP 64307 SirA-like
1 1 1 1 SCOP 52121 Lumazine synthase
1 1 1 0 SCOP 117991 YbeD/HP0495-like
1 1 1 0 SCOP 55129 Ribosomal protein L30p/L7e
1 1 1 0 SCOP 46561 Ribosomal protein L29 (L29p)
1 1 1 1 SCOP 56796 Dehydroquinate synthase-like
1 1 1 0 SCOP 111148 YggX-like
1 1 1 1 SCOP 54995 Ribosomal protein S6
1 1 1 0 SCOP 55387 Frataxin/Nqo15-like
1 1 1 1 SCOP 56104 SAICAR synthase-like
1 1 1 0 SCOP 52949 Macro domain-like
1 1 1 1 SCOP 48256 Citrate synthase
1 1 1 1 SCOP 48613 Heme oxygenase-like
1 1 1 1 SCOP 69500 DTD-like
1 1 1 0 SCOP 52799 (Phosphotyrosine protein) phosphatases II
1 1 1 1 SCOP 56634 Heme-dependent catalase-like
1 1 1 0 SCOP 52499 Isochorismatase-like hydrolases
1 1 1 1 SCOP 49785 Galactose-binding domain-like
1 1 1 1 SCOP 54506 Diaminopimelate epimerase-like
1 1 1 1 SCOP 53774 Glutaminase/Asparaginase
1 1 1 0 SCOP 51197 Clavaminate synthase-like
1 1 1 1 SCOP 48208 Six-hairpin glycosidases
1 1 1 1 SCOP 54919 Nucleoside diphosphate kinase, NDK
1 1 1 1 SCOP 49777 PEBP-like
1 1 1 1 SCOP 53056 beta-carbonic anhydrase, cab
1 1 1 0 SCOP 55257 RBP11-like subunits of RNA polymerase
1 1 1 1 SCOP 56529 FAH
1 1 1 0 SCOP 55961 Bet v1-like
1 1 1 0 SCOP 58113 Apolipoprotein A-I
1 1 1 0 SCOP 69618 HemD-like
1 1 1 1 SCOP 52768 Arginase/deacetylase
1 1 1 1 SCOP 52788 Phosphotyrosine protein phosphatases I
1 1 1 0 SCOP 63562 RPB6/omega subunit-like
1 1 1 1 SCOP 53800 Chelatase
1 1 1 1 SCOP 141734 HisI-like
1 1 1 0 SCOP 81648 a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
1 1 1 0 SCOP 161084 MAPEG domain-like
1 1 1 1 SCOP 143243 Nqo5-like
1 1 1 0 SCOP 144020 FdhE-like
1 1 1 0 SCOP 143422 Transposase IS200-like
1 1 1 0 SCOP 52091 SpoIIaa-like
1 1 1 1 SCOP 51717 Dihydropteroate synthetase-like
1 1 1 1 SCOP 53795 PEP carboxykinase-like
1 1 1 0 SCOP 102712 JAB1/MPN domain
1 1 1 1 SCOP 54593 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
1 1 1 1 SCOP 64438 CNF1/YfiH-like putative cysteine hydrolases
1 1 1 1 SCOP 50494 Trypsin-like serine proteases
1 1 1 0 SCOP 143120 YefM-like
1 1 1 1 SCOP 118196 YaeB-like
1 1 1 1 SCOP 52255 N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE)
1 1 1 0 SCOP 143011 RelE-like
1 1 1 1 SCOP 111352 Ammonium transporter
1 1 1 0 SCOP 55331 Tautomerase/MIF
1 1 1 1 SCOP 142754 NadA-like
1 1 1 1 SCOP 56266 DmpA/ArgJ-like
1 1 1 1 SCOP 82697 PurS-like
1 1 1 0 SCOP 160246 EspE N-terminal domain-like
1 1 1 0 SCOP 50022 ISP domain
1 1 1 1 SCOP 55083 6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase, HPPK
1 1 1 1 SCOP 46767 Methylated DNA-protein cysteine methyltransferase, C-terminal domain
1 1 1 0 SCOP 55166 Hedgehog/DD-peptidase
1 1 1 0 SCOP 55797 PR-1-like
1 1 1 0 SCOP 53300 vWA-like
1 1 1 1 SCOP 56954 Outer membrane efflux proteins (OEP)
1 1 1 1 SCOP 64167 SurE-like
1 1 1 0 SCOP 158682 TerB-like
1 1 1 1 SCOP 63892 Pyridoxine 5'-phosphate synthase
1 1 1 0 SCOP 55154 CYTH-like phosphatases
1 1 1 0 SCOP 51206 cAMP-binding domain-like
1 1 1 0 SCOP 161111 Cation efflux protein transmembrane domain-like
1 1 1 1 SCOP 54913 GlnB-like
1 1 1 0 SCOP 141000 Glu-tRNAGln amidotransferase C subunit
1 1 1 1 SCOP 56762 HydB/Nqo4-like
1 1 1 0 SCOP 116842 XseB-like
1 1 1 1 SCOP 110399 ThiG-like
1 1 1 0 SCOP 53218 Molybdenum cofactor biosynthesis proteins
1 1 1 1 SCOP 111304 Recombination protein RecR
1 1 1 0 SCOP 111069 Hypothetical protein yfbM
1 1 1 0 SCOP 50800 PK beta-barrel domain-like
1 1 1 0 SCOP 50993 Peptidase/esterase 'gauge' domain
1 1 1 0 SCOP 69065 RNase III domain-like
1 1 1 1 SCOP 55200 Translation initiation factor IF3, C-terminal domain
1 1 1 0 SCOP 82689 Mechanosensitive channel protein MscS (YggB), C-terminal domain
1 1 1 0 SCOP 160719 gpW/gp25-like
1 1 1 0 SCOP 158997 Trm112p-like
1 1 1 1 SCOP 53213 LigB-like
1 1 1 0 SCOP 158442 DsbB-like
1 1 1 0 SCOP 102829 Cell division protein ZapA-like
1 1 1 1 SCOP 51391 Thiamin phosphate synthase
1 1 1 1 SCOP 143456 VC0467-like
1 1 1 1 SCOP 48173 Cryptochrome/photolyase FAD-binding domain
1 1 1 0 SCOP 52425 Cryptochrome/photolyase, N-terminal domain
1 1 1 0 SCOP 102400 DNA polymerase III chi subunit
1 1 1 0 SCOP 48600 Chorismate mutase II
1 1 1 1 SCOP 109910 YgfY-like
1 1 1 0 SCOP 101307 YutG-like
1 1 1 0 SCOP 110087 DR1885-like metal-binding protein
1 1 1 1 SCOP 103088 OmpA-like
1 1 1 1 SCOP 118215 Proton glutamate symport protein
1 1 1 0 SCOP 159594 XCC0632-like
1 1 1 1 SCOP 101386 all-alpha NTP pyrophosphatases
1 1 1 0 SCOP 55804 Phoshotransferase/anion transport protein
1 1 1 1 SCOP 48295 TrpR-like
1 1 1 1 SCOP 63411 LuxS/MPP-like metallohydrolase
1 1 1 0 SCOP 57802 Rubredoxin-like
1 1 1 0 SCOP 55785 PYP-like sensor domain (PAS domain)
1 1 1 0 SCOP 50037 C-terminal domain of transcriptional repressors
1 1 1 1 SCOP 117457 FumA C-terminal domain-like
1 1 1 0 SCOP 111384 OmpH-like
1 1 1 0 SCOP 75138 HprK N-terminal domain-like
1 1 1 0 SCOP 64288 Chorismate lyase-like
1 1 1 0 SCOP 101327 YgfB-like
1 1 1 0 SCOP 53062 PTS system fructose IIA component-like
1 1 1 0 SCOP 50486 FMT C-terminal domain-like
1 1 1 0 SCOP 101874 YceI-like
1 1 1 1 SCOP 101738 SspB-like
1 1 1 0 SCOP 103196 Roadblock/LC7 domain
1 1 1 0 SCOP 64076 MTH938-like
1 1 1 0 SCOP 140319 IscX-like
1 1 1 0 SCOP 69917 OMPT-like
1 1 1 0 SCOP 89963 YajQ-like
1 1 1 1 SCOP 51604 Enolase C-terminal domain-like
1 1 1 0 SCOP 103247 TT1751-like
1 1 1 1 SCOP 55846 N-acetylmuramoyl-L-alanine amidase-like
1 1 1 0 SCOP 75471 YhbY-like
1 1 1 0 SCOP 74863 Thiol:disulfide interchange protein DsbD, N-terminal domain (DsbD-alpha)
1 1 1 1 SCOP 50974 Nitrous oxide reductase, N-terminal domain
1 1 1 0 SCOP 74653 TolA/TonB C-terminal domain
1 1 1 0 SCOP 82171 DPP6 N-terminal domain-like
1 1 1 0 SCOP 47175 Cytochromes
1 1 1 0 SCOP 158710 PSPTO4464-like
1 1 1 0 SCOP 158791 MgtE N-terminal domain-like
1 1 1 0 SCOP 52038 Barstar-related
1 1 1 0 SCOP 50346 PRC-barrel domain
1 1 1 1 SCOP 52490 Tubulin nucleotide-binding domain-like
1 1 1 0 SCOP 89946 Hypothetical protein VC0424
1 1 1 0 SCOP 141523 L,D-transpeptidase catalytic domain-like
1 1 1 0 SCOP 47203 Acyl-CoA dehydrogenase C-terminal domain-like
1 1 1 0 SCOP 48498 Tetracyclin repressor-like, C-terminal domain
1 1 1 0 SCOP 50199 Staphylococcal nuclease
1 1 1 1 SCOP 69864 Argininosuccinate synthetase, C-terminal domain
1 1 1 1 SCOP 48024 N-terminal domain of DnaB helicase
1 1 1 1 SCOP 158832 Tex N-terminal region-like
1 1 1 1 SCOP 48592 GroEL equatorial domain-like
1 1 1 0 SCOP 69279 Phage tail proteins
1 1 1 0 SCOP 143749 Phage tail protein-like
1 1 1 1 SCOP 56712 Prokaryotic type I DNA topoisomerase
1 1 1 0 SCOP 53706 Formate dehydrogenase/DMSO reductase, domains 1-3
1 1 1 1 SCOP 57938 DnaJ/Hsp40 cysteine-rich domain
1 1 1 1 SCOP 103032 Hypothetical protein YwqG
1 1 1 0 SCOP 141488 YdhA-like
1 1 1 0 SCOP 82114 Riboflavin kinase-like
1 1 1 0 SCOP 46906 Ribosomal protein L11, C-terminal domain
1 1 1 0 SCOP 160443 SMR domain-like
1 1 1 0 SCOP 82057 Prokaryotic SH3-related domain
1 1 1 1 SCOP 102645 CoaB-like
1 1 1 0 SCOP 118352 HSP33 redox switch-like
1 1 1 1 SCOP 56931 Outer membrane phospholipase A (OMPLA)
1 1 1 0 SCOP 143555 FwdE-like
1 1 1 1 SCOP 54821 Ribosomal protein S3 C-terminal domain
1 1 1 0 SCOP 81573 F1F0 ATP synthase subunit B, membrane domain
1 1 1 0 SCOP 63848 Cell-division inhibitor MinC, C-terminal domain
1 1 1 0 SCOP 69360 Cell wall binding repeat
1 1 1 0 SCOP 52935 PK C-terminal domain-like
1 1 1 0 SCOP 160387 NosL/MerB-like
1 1 1 0 SCOP 109635 DnaK suppressor protein DksA, alpha-hairpin domain
1 1 1 1 SCOP 81935 N-terminal domain of bifunctional PutA protein
1 1 1 0 SCOP 118116 DNA mismatch repair protein MutL
1 1 1 1 SCOP 81336 F1F0 ATP synthase subunit A
1 1 1 1 SCOP 47789 C-terminal domain of RNA polymerase alpha subunit
1 1 1 0 SCOP 51344 Epsilon subunit of F1F0-ATP synthase N-terminal domain
1 1 1 1 SCOP 48657 FinO-like
1 1 1 0 SCOP 55658 L9 N-domain-like
1 1 1 0 SCOP 82679 N-utilization substance G protein NusG, N-terminal domain
1 1 1 0 SCOP 56436 C-type lectin-like
1 1 1 0 SCOP 55190 Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain
1 1 1 0 SCOP 69055 1-deoxy-D-xylulose-5-phosphate reductoisomerase, C-terminal domain
1 1 1 1 SCOP 52418 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain
1 1 1 1 SCOP 48334 DNA repair protein MutS, domain III
1 1 1 0 SCOP 58014 Coiled-coil domain of nucleotide exchange factor GrpE
1 1 1 1 SCOP 161093 MgtE membrane domain-like
1 1 1 1 SCOP 55307 Tubulin C-terminal domain-like
1 1 1 1 SCOP 140990 FtsH protease domain-like
1 1 1 0 SCOP 52964 TolB, N-terminal domain
1 1 1 1 SCOP 54719 Fe,Mn superoxide dismutase (SOD), C-terminal domain
1 1 1 0 SCOP 48163 An anticodon-binding domain of class I aminoacyl-tRNA synthetases
1 1 1 1 SCOP 143968 UbiD C-terminal domain-like
1 1 1 1 SCOP 52021 Carbamoyl phosphate synthetase, small subunit N-terminal domain
1 1 1 0 SCOP 54791 Eukaryotic type KH-domain (KH-domain type I)
1 1 1 1 SCOP 54826 Enolase N-terminal domain-like
1 1 1 1 SCOP 52029 GroEL apical domain-like
1 1 1 0 SCOP 55060 GHMP Kinase, C-terminal domain
1 1 1 0 SCOP 68912 Rho N-terminal domain-like
1 1 1 1 SCOP 54810 GMP synthetase C-terminal dimerisation domain
1 1 1 0 SCOP 57825 Aspartate carbamoyltransferase, Regulatory-chain, C-terminal domain
1 1 1 0 SCOP 57863 ArfGap/RecO-like zinc finger
1 1 1 1 SCOP 143548 Serine metabolism enzymes domain
1 1 1 0 SCOP 47364 Domain of the SRP/SRP receptor G-proteins
1 1 1 0 SCOP 48300 Ribosomal protein L7/12, oligomerisation (N-terminal) domain
1 1 1 0 SCOP 63737 Leukotriene A4 hydrolase N-terminal domain
1 1 1 0 SCOP 90002 Hypothetical protein YjiA, C-terminal domain
1 1 1 0 SCOP 47144 HSC20 (HSCB), C-terminal oligomerisation domain
1 1 1 0 SCOP 46934 UBA-like
1 1 1 0 SCOP 160240 Cation efflux protein cytoplasmic domain-like
1 1 1 0 SCOP 47648 Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain
1 1 1 0 SCOP 46604 Epsilon subunit of F1F0-ATP synthase C-terminal domain
1 1 1 0 SCOP 110921 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain
1 1 1 0 SCOP 47823 lambda integrase-like, N-terminal domain
1 1 1 0 SCOP 54423 DsbC/DsbG N-terminal domain-like
1 1 1 0 SCOP 100879 Lesion bypass DNA polymerase (Y-family), little finger domain
1 1 1 0 SCOP 69075 Glutamyl tRNA-reductase dimerization domain
1 1 1 0 SCOP 52113 BRCT domain
1 1 1 1 SCOP 141259 CarD-like
1 1 1 0 SCOP 53155 Methylated DNA-protein cysteine methyltransferase domain
1 1 1 1 SCOP 54373 FAD-linked reductases, C-terminal domain
1 1 1 0 SCOP 82861 Mechanosensitive channel protein MscS (YggB), transmembrane region
1 1 1 0 SCOP 47831 Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain
1 1 1 0 SCOP 74942 YhbC-like, C-terminal domain
1 1 1 0 SCOP 48435 Bacterial muramidases
1 1 1 0 SCOP 117892 Band 7/SPFH domain
1 1 1 0 SCOP 75420 YhbC-like, N-terminal domain
1 1 1 1 SCOP 81624 N-terminal domain of MutM-like DNA repair proteins
1 1 1 0 SCOP 54752 RecA protein, C-terminal domain
1 1 1 0 SCOP 54782 Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain
1 1 1 1 SCOP 102735 Trigger factor ribosome-binding domain
1 1 1 1 SCOP 55031 Bacterial exopeptidase dimerisation domain
1 1 1 0 SCOP 69189 Penicillin-binding protein associated domain
1 1 1 0 SCOP 47807 5' to 3' exonuclease, C-terminal subdomain
1 1 1 1 SCOP 47446 Signal peptide-binding domain
1 1 1 1 SCOP 64397 Hsp33 domain
1 1 1 0 SCOP 54991 Anticodon-binding domain of PheRS
1 1 1 0 SCOP 141986 LD-carboxypeptidase A C-terminal domain-like
1 1 1 1 SCOP 55271 DNA repair protein MutS, domain I
1 1 1 0 SCOP 55048 Probable ACP-binding domain of malonyl-CoA ACP transacylase
1 1 1 0 SCOP 47928 N-terminal domain of the delta subunit of the F1F0-ATP synthase
1 1 1 1 SCOP 48108 Carbamoyl phosphate synthetase, large subunit connection domain
1 1 1 1 SCOP 82051 Obg GTP-binding protein N-terminal domain
1 1 1 0 SCOP 143724 PHP14-like
1 1 1 1 SCOP 54368 Glutamine synthetase, N-terminal domain
1 1 1 1 SCOP 55261 GAD domain-like
1 1 1 1 SCOP 54747 Ribosomal L11/L12e N-terminal domain
1 1 1 1 SCOP 46609 Fe,Mn superoxide dismutase (SOD), N-terminal domain
1 1 1 0 SCOP 69742 Glutamyl tRNA-reductase catalytic, N-terminal domain
1 1 1 0 SCOP 75553 Smc hinge domain
1 1 1 0 SCOP 75615 Siroheme synthase middle domains-like
1 1 1 1 SCOP 48168 R1 subunit of ribonucleotide reductase, N-terminal domain
1 1 1 1 SCOP 81886 Helical scaffold and wing domains of SecA
1 1 1 0 SCOP 54849 GroEL-intermediate domain like
1 1 1 1 SCOP 56194 Uridine diphospho-N-Acetylenolpyruvylglucosamine reductase, MurB, C-terminal domain
1 1 1 0 SCOP 52156 Initiation factor IF2/eIF5b, domain 3
1 1 1 0 SCOP 116878 TrmE connector domain
1 1 1 0 SCOP 51064 Head domain of nucleotide exchange factor GrpE
1 1 1 0 SCOP 55653 Ribosomal protein L9 C-domain
1 1 1 0 SCOP 75445 D-ribose-5-phosphate isomerase (RpiA), lid domain
1 1 1 0 SCOP 101790 Aminomethyltransferase beta-barrel domain
1 1 1 1 SCOP 143517 TRCF domain-like
1 1 1 1 SCOP 101353 Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS)
1 1 1 1 SCOP 56553 Insert subdomain of RNA polymerase alpha subunit
1 1 1 1 SCOP 74778 Aconitase B, N-terminal domain
1 1 1 0 SCOP 64383 Cell-division protein ZipA, C-terminal domain
1 1 1 0 SCOP 117023 DNA primase DnaG, C-terminal domain
1 1 1 0 SCOP 46929 DNA helicase RuvA subunit, C-terminal domain
1 1 1 1 SCOP 54893 Aspartate carbamoyltransferase, Regulatory-chain, N-terminal domain
1 1 1 0 SCOP 54364 Translation initiation factor IF3, N-terminal domain
1 1 1 0 SCOP 69705 Transcription factor NusA, N-terminal domain
1 1 1 0 SCOP 53150 DNA repair protein MutS, domain II
1 1 1 1 SCOP 81767 Pre-protein crosslinking domain of SecA
1 1 1 0 SCOP 140356 PPK N-terminal domain-like
1 1 1 0 SCOP 56519 Penicillin binding protein dimerisation domain
1 1 1 0 SCOP 81799 Putative methyltransferase TM0872, insert domain
1 1 1 0 SCOP 82829 MesJ substrate recognition domain-like
1 1 1 0 SCOP 109736 FGAM synthase PurL, linker domain
1 1 1 0 SCOP 57770 Methionyl-tRNA synthetase (MetRS), Zn-domain

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