SUPERFAMILY 1.75 HMM library and genome assignments server

Prevotella denticola F0289 superfamily assignments

Taxonomy
Taxonomy browser entry

Bacteria; Bacteroidetes/Chlorobi group; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; Prevotella denticola; Prevotella denticola F0289

Downloads
Fasta format sequences
Domain assignments


Jump to [ Top of page · Domain assignments ]

Assignment statistics

Sequences: 2386 total
1423 (60 %) with assignment
342 average length
56 % amino acid coverage
Domains: 2093 total
549 unique superfamilies
339 unique families
318 average length
3.8 average superfamily size
74 % formed by duplication
Domain combinations: 343 domain pairs
794 unique architectures

Jump to [ Top of page · Assignment statistics ]

Superfamily assignments

Domains

Proteins

Architectures

Families

SCOP link

Superfamilies

162 138 61 9 SCOP 52540 P-loop containing nucleoside triphosphate hydrolases
65 64 10 0 SCOP 56935 Porins
48 44 11 1 SCOP 48452 TPR-like
46 45 18 7 SCOP 51735 NAD(P)-binding Rossmann-fold domains
39 39 8 0 SCOP 49464 Carboxypeptidase regulatory domain-like
36 36 8 3 SCOP 53448 Nucleotide-diphospho-sugar transferases
36 36 20 7 SCOP 51445 (Trans)glycosidases
31 23 21 3 SCOP 50249 Nucleic acid-binding proteins
27 27 11 3 SCOP 53335 S-adenosyl-L-methionine-dependent methyltransferases
24 24 16 0 SCOP 46785 "Winged helix" DNA-binding domain
21 21 2 1 SCOP 53756 UDP-Glycosyltransferase/glycogen phosphorylase
20 11 5 4 SCOP 53067 Actin-like ATPase domain
20 19 13 0 SCOP 46689 Homeodomain-like
19 17 13 6 SCOP 54211 Ribosomal protein S5 domain 2-like
17 16 5 1 SCOP 52833 Thioredoxin-like
17 15 4 0 SCOP 88659 Sigma3 and sigma4 domains of RNA polymerase sigma factors
16 14 3 0 SCOP 103473 MFS general substrate transporter
16 15 4 0 SCOP 102114 Radical SAM enzymes
15 15 4 3 SCOP 56784 HAD-like
15 15 12 2 SCOP 52374 Nucleotidylyl transferase
15 6 6 1 SCOP 63411 LuxS/MPP-like metallohydrolase
14 9 8 4 SCOP 52518 Thiamin diphosphate-binding fold (THDP-binding)
14 14 3 4 SCOP 53383 PLP-dependent transferases
14 14 12 2 SCOP 55681 Class II aaRS and biotin synthetases
14 14 3 1 SCOP 88946 Sigma2 domain of RNA polymerase sigma factors
13 12 10 2 SCOP 51905 FAD/NAD(P)-binding domain
13 13 10 1 SCOP 55874 ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
13 13 2 1 SCOP 56349 DNA breaking-rejoining enzymes
12 12 4 2 SCOP 53098 Ribonuclease H-like
12 10 6 4 SCOP 52096 ClpP/crotonase
12 12 4 3 SCOP 48208 Six-hairpin glycosidases
12 12 5 3 SCOP 55347 Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
11 11 7 2 SCOP 52317 Class I glutamine amidotransferase-like
11 11 9 0 SCOP 52172 CheY-like
10 10 4 2 SCOP 56300 Metallo-dependent phosphatases
10 9 6 1 SCOP 54534 FKBP-like
10 9 8 2 SCOP 50447 Translation proteins
10 7 4 2 SCOP 53901 Thiolase-like
10 5 4 1 SCOP 82866 Multidrug efflux transporter AcrB transmembrane domain
9 8 7 3 SCOP 56059 Glutathione synthetase ATP-binding domain-like
9 9 5 2 SCOP 53474 alpha/beta-Hydrolases
9 9 8 2 SCOP 52402 Adenine nucleotide alpha hydrolases-like
9 9 4 1 SCOP 109604 HD-domain/PDEase-like
9 7 4 1 SCOP 55729 Acyl-CoA N-acyltransferases (Nat)
9 9 4 1 SCOP 53649 Alkaline phosphatase-like
9 9 5 1 SCOP 54001 Cysteine proteinases
9 9 8 1 SCOP 49785 Galactose-binding domain-like
9 8 4 0 SCOP 52266 SGNH hydrolase
9 9 2 0 SCOP 46955 Putative DNA-binding domain
9 5 4 1 SCOP 54980 EF-G C-terminal domain-like
8 8 3 2 SCOP 53271 PRTase-like
8 8 2 1 SCOP 47729 IHF-like DNA-binding proteins
8 8 3 2 SCOP 51161 Trimeric LpxA-like enzymes
8 7 3 2 SCOP 54637 Thioesterase/thiol ester dehydrase-isomerase
8 5 3 0 SCOP 103481 Multidrug resistance efflux transporter EmrE
8 8 3 0 SCOP 56925 OMPA-like
8 4 3 0 SCOP 116726 TrkA C-terminal domain-like
8 2 1 0 SCOP 82693 Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains
7 7 3 4 SCOP 51569 Aldolase
7 7 4 3 SCOP 55120 Pseudouridine synthase
7 7 3 2 SCOP 55486 Metalloproteases ("zincins"), catalytic domain
7 7 3 0 SCOP 46894 C-terminal effector domain of the bipartite response regulators
7 5 4 0 SCOP 55021 ACT-like
7 5 5 0 SCOP 47781 RuvA domain 2-like
7 7 6 3 SCOP 75005 Arabinanase/levansucrase/invertase
7 7 2 1 SCOP 90123 ABC transporter transmembrane region
7 6 4 0 SCOP 50156 PDZ domain-like
7 6 6 1 SCOP 47323 Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
7 5 5 0 SCOP 82185 Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain
7 7 5 0 SCOP 51011 Glycosyl hydrolase domain
6 6 3 2 SCOP 53927 Cytidine deaminase-like
6 6 4 1 SCOP 100950 NagB/RpiA/CoA transferase-like
6 6 4 1 SCOP 55174 Alpha-L RNA-binding motif
6 6 4 1 SCOP 55811 Nudix
6 6 3 1 SCOP 53187 Zn-dependent exopeptidases
6 6 2 1 SCOP 56801 Acetyl-CoA synthetase-like
6 6 2 2 SCOP 51182 RmlC-like cupins
6 5 4 0 SCOP 49899 Concanavalin A-like lectins/glucanases
6 6 5 1 SCOP 56601 beta-lactamase/transpeptidase-like
6 6 4 1 SCOP 53955 Lysozyme-like
6 4 4 0 SCOP 111369 HlyD-like secretion proteins
6 6 2 0 SCOP 103088 OmpA-like
6 6 1 0 SCOP 74653 TolA/TonB C-terminal domain
6 6 4 1 SCOP 53244 MurD-like peptide ligases, peptide-binding domain
6 6 6 0 SCOP 47384 Homodimeric domain of signal transducing histidine kinase
6 6 5 1 SCOP 52922 TK C-terminal domain-like
6 6 4 2 SCOP 53623 MurD-like peptide ligases, catalytic domain
6 2 2 0 SCOP 53738 Phosphoglucomutase, first 3 domains
5 5 3 1 SCOP 53613 Ribokinase-like
5 5 4 2 SCOP 50104 Translation proteins SH3-like domain
5 5 3 0 SCOP 69593 Glycerol-3-phosphate (1)-acyltransferase
5 5 3 1 SCOP 75217 alpha/beta knot
5 5 4 0 SCOP 54862 4Fe-4S ferredoxins
5 5 2 2 SCOP 56281 Metallo-hydrolase/oxidoreductase
5 5 4 1 SCOP 51419 PLP-binding barrel
5 5 5 0 SCOP 63829 Calcium-dependent phosphotriesterase
5 4 2 0 SCOP 55469 FMN-dependent nitroreductase-like
5 5 2 1 SCOP 48317 Acid phosphatase/Vanadium-dependent haloperoxidase
5 5 3 1 SCOP 74650 Galactose mutarotase-like
5 3 3 0 SCOP 52058 L domain-like
5 5 4 1 SCOP 53822 Periplasmic binding protein-like I
5 5 2 1 SCOP 56219 DNase I-like
5 3 3 0 SCOP 56024 Phospholipase D/nuclease
5 5 5 0 SCOP 46548 alpha-helical ferredoxin
5 5 2 1 SCOP 52743 Subtilisin-like
5 5 2 2 SCOP 53223 Aminoacid dehydrogenase-like, N-terminal domain
5 4 3 1 SCOP 52440 PreATP-grasp domain
5 4 4 0 SCOP 63380 Riboflavin synthase domain-like
4 4 4 2 SCOP 51556 Metallo-dependent hydrolases
4 4 3 1 SCOP 56731 DNA primase core
4 4 2 1 SCOP 52141 Uracil-DNA glycosylase-like
4 4 1 2 SCOP 51366 Ribulose-phoshate binding barrel
4 4 3 1 SCOP 55920 Creatinase/aminopeptidase
4 4 2 2 SCOP 47240 Ferritin-like
4 4 1 0 SCOP 47336 ACP-like
4 4 2 2 SCOP 53659 Isocitrate/Isopropylmalate dehydrogenase-like
4 4 3 1 SCOP 53850 Periplasmic binding protein-like II
4 4 3 2 SCOP 56672 DNA/RNA polymerases
4 4 4 0 SCOP 81296 E set domains
4 4 3 0 SCOP 88713 Glycoside hydrolase/deacetylase
4 4 2 1 SCOP 52151 FabD/lysophospholipase-like
4 4 4 0 SCOP 52954 Class II aaRS ABD-related
4 4 3 1 SCOP 54631 CBS-domain pair
4 4 4 2 SCOP 51998 PFL-like glycyl radical enzymes
4 4 3 0 SCOP 47413 lambda repressor-like DNA-binding domains
4 4 3 0 SCOP 81301 Nucleotidyltransferase
4 4 1 0 SCOP 53300 vWA-like
4 4 2 1 SCOP 56954 Outer membrane efflux proteins (OEP)
4 3 3 1 SCOP 54814 Prokaryotic type KH domain (KH-domain type II)
4 4 2 1 SCOP 140931 Fic-like
4 4 2 0 SCOP 111384 OmpH-like
4 4 3 0 SCOP 82171 DPP6 N-terminal domain-like
4 4 4 1 SCOP 55186 ThrRS/AlaRS common domain
4 4 2 1 SCOP 48179 6-phosphogluconate dehydrogenase C-terminal domain-like
4 4 1 1 SCOP 56712 Prokaryotic type I DNA topoisomerase
4 3 2 0 SCOP 69318 Integrin alpha N-terminal domain
4 3 3 0 SCOP 54106 LysM domain
4 4 3 1 SCOP 56719 Type II DNA topoisomerase
4 4 3 0 SCOP 50621 Alanine racemase C-terminal domain-like
4 3 2 1 SCOP 56042 PurM C-terminal domain-like
4 3 2 1 SCOP 55326 PurM N-terminal domain-like
4 2 1 0 SCOP 82714 Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains
4 4 3 1 SCOP 81271 TGS-like
4 2 1 0 SCOP 49303 beta-Galactosidase/glucuronidase domain
3 3 1 1 SCOP 53167 Purine and uridine phosphorylases
3 3 2 0 SCOP 56112 Protein kinase-like (PK-like)
3 3 2 2 SCOP 53697 SIS domain
3 3 2 1 SCOP 111331 NAD kinase/diacylglycerol kinase-like
3 3 3 1 SCOP 57716 Glucocorticoid receptor-like (DNA-binding domain)
3 3 3 0 SCOP 52218 Flavoproteins
3 3 3 0 SCOP 109998 Triger factor/SurA peptide-binding domain-like
3 3 3 1 SCOP 53633 Carbamate kinase-like
3 3 1 2 SCOP 48557 L-aspartase-like
3 3 3 0 SCOP 51261 Duplicated hybrid motif
3 3 3 3 SCOP 51621 Phosphoenolpyruvate/pyruvate domain
3 3 2 1 SCOP 53254 Phosphoglycerate mutase-like
3 2 2 1 SCOP 55298 YjgF-like
3 2 2 0 SCOP 50891 Cyclophilin-like
3 2 2 0 SCOP 51306 LexA/Signal peptidase
3 3 3 0 SCOP 51126 Pectin lyase-like
3 3 3 0 SCOP 55008 HMA, heavy metal-associated domain
3 3 1 0 SCOP 52283 Formate/glycerate dehydrogenase catalytic domain-like
3 3 1 1 SCOP 55620 Tetrahydrobiopterin biosynthesis enzymes-like
3 3 1 0 SCOP 54909 Dimeric alpha+beta barrel
3 3 3 1 SCOP 50494 Trypsin-like serine proteases
3 3 3 1 SCOP 51230 Single hybrid motif
3 3 2 0 SCOP 55166 Hedgehog/DD-peptidase
3 3 2 0 SCOP 51206 cAMP-binding domain-like
3 3 3 0 SCOP 88697 PUA domain-like
3 2 2 0 SCOP 101386 all-alpha NTP pyrophosphatases
3 3 3 1 SCOP 53323 Pyruvate-ferredoxin oxidoreductase, PFOR, domain III
3 2 2 0 SCOP 57802 Rubredoxin-like
3 3 3 1 SCOP 46565 Chaperone J-domain
3 3 3 0 SCOP 52343 Ferredoxin reductase-like, C-terminal NADP-linked domain
3 3 2 0 SCOP 46589 tRNA-binding arm
3 1 1 0 SCOP 55979 DNA clamp
3 3 2 1 SCOP 56176 FAD-binding/transporter-associated domain-like
3 1 1 1 SCOP 55973 S-adenosylmethionine synthetase
3 3 3 0 SCOP 81665 Calcium ATPase, transmembrane domain M
3 3 1 1 SCOP 140753 PG0816-like
3 3 2 0 SCOP 63418 MurE/MurF N-terminal domain
3 3 3 1 SCOP 50677 ValRS/IleRS/LeuRS editing domain
3 3 3 0 SCOP 55545 beta-N-acetylhexosaminidase-like domain
3 2 2 0 SCOP 49493 HSP40/DnaJ peptide-binding domain
3 3 3 0 SCOP 81653 Calcium ATPase, transduction domain A
2 2 2 0 SCOP 54197 HIT-like
2 2 1 0 SCOP 89919 Ribosome-binding factor A, RbfA
2 2 1 1 SCOP 53137 Translational machinery components
2 2 2 1 SCOP 64182 DHH phosphoesterases
2 2 1 1 SCOP 53784 Phosphofructokinase
2 2 1 1 SCOP 55831 Thymidylate synthase/dCMP hydroxymethylase
2 2 2 0 SCOP 53597 Dihydrofolate reductase-like
2 2 1 0 SCOP 143800 L28p-like
2 2 1 1 SCOP 75620 Release factor
2 2 2 0 SCOP 82649 SufE/NifU
2 2 1 1 SCOP 52980 Restriction endonuclease-like
2 2 2 1 SCOP 50129 GroES-like
2 2 1 2 SCOP 64484 beta and beta-prime subunits of DNA dependent RNA-polymerase
2 2 2 1 SCOP 55821 YrdC/RibB
2 2 1 1 SCOP 53686 Tryptophan synthase beta subunit-like PLP-dependent enzymes
2 2 2 2 SCOP 48150 DNA-glycosylase
2 2 2 1 SCOP 111337 QueA-like
2 2 2 1 SCOP 50715 Ribosomal protein L25-like
2 2 2 0 SCOP 54292 2Fe-2S ferredoxin-like
2 2 1 1 SCOP 55205 EPT/RTPC-like
2 2 1 1 SCOP 51395 FMN-linked oxidoreductases
2 2 2 0 SCOP 54060 His-Me finger endonucleases
2 2 1 1 SCOP 48576 Terpenoid synthases
2 2 2 1 SCOP 56235 N-terminal nucleophile aminohydrolases (Ntn hydrolases)
2 2 1 0 SCOP 48371 ARM repeat
2 2 2 0 SCOP 50182 Sm-like ribonucleoproteins
2 2 1 0 SCOP 50475 FMN-binding split barrel
2 2 1 1 SCOP 56322 ADC synthase
2 2 1 1 SCOP 56752 D-aminoacid aminotransferase-like PLP-dependent enzymes
2 2 2 0 SCOP 56317 Carbon-nitrogen hydrolase
2 2 1 2 SCOP 52972 ITPase-like
2 2 1 0 SCOP 55961 Bet v1-like
2 2 2 1 SCOP 101960 Stabilizer of iron transporter SufD
2 2 2 1 SCOP 55931 Glutamine synthetase/guanido kinase
2 2 1 1 SCOP 101478 ADP-ribosylglycohydrolase
2 2 2 1 SCOP 102405 MCP/YpsA-like
2 2 2 1 SCOP 53795 PEP carboxykinase-like
2 2 2 0 SCOP 57783 Zinc beta-ribbon
2 2 2 0 SCOP 117916 Fe-S cluster assembly (FSCA) domain-like
2 2 1 0 SCOP 55083 6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase, HPPK
2 2 2 0 SCOP 46767 Methylated DNA-protein cysteine methyltransferase, C-terminal domain
2 2 2 0 SCOP 55154 CYTH-like phosphatases
2 2 2 0 SCOP 161111 Cation efflux protein transmembrane domain-like
2 2 2 1 SCOP 52467 DHS-like NAD/FAD-binding domain
2 2 2 0 SCOP 50969 YVTN repeat-like/Quinoprotein amine dehydrogenase
2 2 1 0 SCOP 89392 Prokaryotic lipoproteins and lipoprotein localization factors
2 2 2 0 SCOP 51338 Composite domain of metallo-dependent hydrolases
2 2 2 0 SCOP 56645 Acyl-CoA dehydrogenase NM domain-like
2 2 2 1 SCOP 52335 Methylglyoxal synthase-like
2 2 1 0 SCOP 53041 Resolvase-like
2 2 1 1 SCOP 51604 Enolase C-terminal domain-like
2 2 2 1 SCOP 48695 Multiheme cytochromes
2 2 2 0 SCOP 53092 Creatinase/prolidase N-terminal domain
2 2 1 2 SCOP 51690 Nicotinate/Quinolinate PRTase C-terminal domain-like
2 2 1 0 SCOP 51246 Rudiment single hybrid motif
2 2 2 0 SCOP 101898 NHL repeat
2 2 2 0 SCOP 81923 Double Clp-N motif
2 2 2 1 SCOP 48019 post-AAA+ oligomerization domain-like
2 2 2 0 SCOP 47789 C-terminal domain of RNA polymerase alpha subunit
2 2 2 0 SCOP 55816 5'-nucleotidase (syn. UDP-sugar hydrolase), C-terminal domain
2 1 1 0 SCOP 53681 Aspartate/glutamate racemase
2 2 2 0 SCOP 82679 N-utilization substance G protein NusG, N-terminal domain
2 2 2 1 SCOP 52210 Succinyl-CoA synthetase domains
2 2 2 1 SCOP 56037 PheT/TilS domain
2 2 1 0 SCOP 51215 Regulatory protein AraC
2 2 2 1 SCOP 48334 DNA repair protein MutS, domain III
2 2 2 0 SCOP 54791 Eukaryotic type KH-domain (KH-domain type I)
2 2 1 1 SCOP 54826 Enolase N-terminal domain-like
2 2 1 0 SCOP 55060 GHMP Kinase, C-terminal domain
2 2 2 1 SCOP 56425 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain
2 2 2 0 SCOP 46977 Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain
2 2 2 0 SCOP 46600 C-terminal UvrC-binding domain of UvrB
2 2 1 0 SCOP 110997 Sporulation related repeat
2 2 1 0 SCOP 51984 MurCD N-terminal domain
2 2 2 0 SCOP 54768 dsRNA-binding domain-like
2 1 1 1 SCOP 56053 Ribosomal protein L6
2 2 1 0 SCOP 117892 Band 7/SPFH domain
2 1 1 1 SCOP 55116 Formiminotransferase domain of formiminotransferase-cyclodeaminase.
2 2 2 0 SCOP 55957 Phosphoglucomutase, C-terminal domain
2 2 1 0 SCOP 159283 Guanosine diphospho-D-mannose pyrophosphorylase/mannose-6-phosphate isomerase linker domain
2 2 1 0 SCOP 54675 Nicotinate/Quinolinate PRTase N-terminal domain-like
2 2 1 0 SCOP 50615 N-terminal domain of alpha and beta subunits of F1 ATP synthase
2 1 1 0 SCOP 54713 Elongation factor Ts (EF-Ts), dimerisation domain
2 1 1 0 SCOP 55666 Ribonuclease PH domain 2-like
2 2 1 1 SCOP 47917 C-terminal domain of alpha and beta subunits of F1 ATP synthase
2 2 2 0 SCOP 54184 Penicillin-binding protein 2x (pbp-2x), c-terminal domain
2 2 2 0 SCOP 56519 Penicillin binding protein dimerisation domain
1 1 1 0 SCOP 48013 NusB-like
1 1 1 1 SCOP 81338 Aquaporin-like
1 1 1 0 SCOP 57829 Zn-binding ribosomal proteins
1 1 1 0 SCOP 53790 Tetrapyrrole methylase
1 1 1 1 SCOP 74982 Small protein B (SmpB)
1 1 1 1 SCOP 56808 Ribosomal protein L1
1 1 1 1 SCOP 53178 Peptidyl-tRNA hydrolase-like
1 1 1 1 SCOP 47973 Ribosomal protein S7
1 1 1 0 SCOP 46911 Ribosomal protein S18
1 1 1 1 SCOP 143597 YojJ-like
1 1 1 1 SCOP 56420 Peptide deformylase
1 1 1 0 SCOP 81606 PP2C-like
1 1 1 0 SCOP 142433 CinA-like
1 1 1 1 SCOP 54999 Ribosomal protein S10
1 1 1 1 SCOP 52166 Ribosomal protein L4
1 1 1 0 SCOP 54189 Ribosomal proteins S24e, L23 and L15e
1 1 1 1 SCOP 54570 Ribosomal protein S19
1 1 1 0 SCOP 54843 Ribosomal protein L22
1 1 1 1 SCOP 54686 Ribosomal protein L16p/L10e
1 1 1 1 SCOP 50193 Ribosomal protein L14
1 1 1 1 SCOP 55282 RL5-like
1 1 1 1 SCOP 56047 Ribosomal protein S8
1 1 1 1 SCOP 52080 Ribosomal proteins L15p and L18e
1 1 1 0 SCOP 103491 Preprotein translocase SecY subunit
1 1 1 0 SCOP 57840 Ribosomal protein L36
1 1 1 1 SCOP 46946 S13-like H2TH domain
1 1 1 1 SCOP 64263 Prokaryotic ribosomal protein L17
1 1 1 0 SCOP 143034 L35p-like
1 1 1 1 SCOP 74731 Ribosomal protein L20
1 1 1 0 SCOP 56214 4'-phosphopantetheinyl transferase
1 1 1 0 SCOP 89447 AbrB/MazE/MraZ-like
1 1 1 0 SCOP 141091 L21p-like
1 1 1 0 SCOP 110324 Ribosomal L27 protein-like
1 1 1 1 SCOP 53748 Phosphoglycerate kinase
1 1 1 1 SCOP 75625 YebC-like
1 1 1 0 SCOP 160369 Ribosomal protein L10-like
1 1 1 0 SCOP 46992 Ribosomal protein S20
1 1 1 1 SCOP 89623 Ribose/Galactose isomerase RpiB/AlsB
1 1 1 0 SCOP 52943 ATP synthase (F1-ATPase), gamma subunit
1 1 1 0 SCOP 81333 F1F0 ATP synthase subunit C
1 1 1 1 SCOP 55068 Peptide methionine sulfoxide reductase
1 1 1 0 SCOP 109755 PhoU-like
1 1 1 1 SCOP 52161 Ribosomal protein L13
1 1 1 0 SCOP 47060 S15/NS1 RNA-binding domain
1 1 1 0 SCOP 82784 OsmC-like
1 1 1 1 SCOP 51351 Triosephosphate isomerase (TIM)
1 1 1 1 SCOP 55194 Ribosome recycling factor, RRF
1 1 1 0 SCOP 54565 Ribosomal protein S16
1 1 1 1 SCOP 51316 Mss4-like
1 1 1 1 SCOP 69765 IpsF-like
1 1 1 0 SCOP 52821 Rhodanese/Cell cycle control phosphatase
1 1 1 0 SCOP 54611 SecB-like
1 1 1 1 SCOP 103263 Chorismate synthase, AroC
1 1 1 1 SCOP 51283 dUTPase-like
1 1 1 1 SCOP 51713 tRNA-guanine transglycosylase
1 1 1 1 SCOP 56770 HydA/Nqo6-like
1 1 1 1 SCOP 51412 Inosine monophosphate dehydrogenase (IMPDH)
1 1 1 1 SCOP 52313 Ribosomal protein S2
1 1 1 1 SCOP 64005 Undecaprenyl diphosphate synthase
1 1 1 1 SCOP 142695 RibA-like
1 1 1 1 SCOP 102705 NIF3 (NGG1p interacting factor 3)-like
1 1 1 1 SCOP 81345 ABC transporter involved in vitamin B12 uptake, BtuC
1 1 1 1 SCOP 52304 Type II 3-dehydroquinate dehydratase
1 1 1 0 SCOP 50685 Barwin-like endoglucanases
1 1 1 1 SCOP 52121 Lumazine synthase
1 1 1 0 SCOP 55129 Ribosomal protein L30p/L7e
1 1 1 0 SCOP 46561 Ribosomal protein L29 (L29p)
1 1 1 1 SCOP 56796 Dehydroquinate synthase-like
1 1 1 0 SCOP 54995 Ribosomal protein S6
1 1 1 0 SCOP 49764 HSP20-like chaperones
1 1 1 1 SCOP 56104 SAICAR synthase-like
1 1 1 0 SCOP 55315 L30e-like
1 1 1 0 SCOP 110296 Oligoxyloglucan reducing end-specific cellobiohydrolase
1 1 1 1 SCOP 69500 DTD-like
1 1 1 0 SCOP 51726 UROD/MetE-like
1 1 1 0 SCOP 88723 PIN domain-like
1 1 1 1 SCOP 53328 Formyltransferase
1 1 1 0 SCOP 46626 Cytochrome c
1 1 1 0 SCOP 52499 Isochorismatase-like hydrolases
1 1 1 0 SCOP 48239 Terpenoid cyclases/Protein prenyltransferases
1 1 1 0 SCOP 69572 Activating enzymes of the ubiquitin-like proteins
1 1 1 1 SCOP 53774 Glutaminase/Asparaginase
1 1 1 0 SCOP 54928 RNA-binding domain, RBD
1 1 1 0 SCOP 47819 HRDC-like
1 1 1 0 SCOP 51197 Clavaminate synthase-like
1 1 1 1 SCOP 55781 GAF domain-like
1 1 1 0 SCOP 110849 ParB/Sulfiredoxin
1 1 1 0 SCOP 81343 Fumarate reductase respiratory complex transmembrane subunits
1 1 1 0 SCOP 55257 RBP11-like subunits of RNA polymerase
1 1 1 1 SCOP 56529 FAH
1 1 1 0 SCOP 64153 YjeF N-terminal domain-like
1 1 1 0 SCOP 69618 HemD-like
1 1 1 1 SCOP 55909 Pentein
1 1 1 0 SCOP 144091 Rhomboid-like
1 1 1 0 SCOP 49478 Cna protein B-type domain
1 1 1 0 SCOP 143243 Nqo5-like
1 1 1 1 SCOP 51717 Dihydropteroate synthetase-like
1 1 1 0 SCOP 102712 JAB1/MPN domain
1 1 1 0 SCOP 54593 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
1 1 1 1 SCOP 64438 CNF1/YfiH-like putative cysteine hydrolases
1 1 1 1 SCOP 118196 YaeB-like
1 1 1 1 SCOP 52255 N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE)
1 1 1 1 SCOP 142754 NadA-like
1 1 1 0 SCOP 82771 GIY-YIG endonuclease
1 1 1 0 SCOP 82697 PurS-like
1 1 1 0 SCOP 53807 "Helical backbone" metal receptor
1 1 1 0 SCOP 103256 Hypothetical protein TM0160
1 1 1 0 SCOP 49503 Cupredoxins
1 1 1 0 SCOP 89550 PHP domain-like
1 1 1 1 SCOP 50692 ADC-like
1 1 1 1 SCOP 64167 SurE-like
1 1 1 0 SCOP 158682 TerB-like
1 1 1 1 SCOP 117782 YbjQ-like
1 1 1 0 SCOP 52507 Homo-oligomeric flavin-containing Cys decarboxylases, HFCD
1 1 1 0 SCOP 81340 Clc chloride channel
1 1 1 1 SCOP 56762 HydB/Nqo4-like
1 1 1 0 SCOP 116842 XseB-like
1 1 1 0 SCOP 54736 ClpS-like
1 1 1 1 SCOP 111304 Recombination protein RecR
1 1 1 0 SCOP 50800 PK beta-barrel domain-like
1 1 1 0 SCOP 49879 SMAD/FHA domain
1 1 1 0 SCOP 116734 DNA methylase specificity domain
1 1 1 1 SCOP 50993 Peptidase/esterase 'gauge' domain
1 1 1 0 SCOP 69065 RNase III domain-like
1 1 1 0 SCOP 55200 Translation initiation factor IF3, C-terminal domain
1 1 1 0 SCOP 82689 Mechanosensitive channel protein MscS (YggB), C-terminal domain
1 1 1 0 SCOP 82153 FAS1 domain
1 1 1 0 SCOP 102829 Cell division protein ZapA-like
1 1 1 0 SCOP 51391 Thiamin phosphate synthase
1 1 1 0 SCOP 50998 Quinoprotein alcohol dehydrogenase-like
1 1 1 0 SCOP 89028 Cobalamin adenosyltransferase-like
1 1 1 0 SCOP 51004 C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
1 1 1 0 SCOP 81330 Gated mechanosensitive channel
1 1 1 0 SCOP 48600 Chorismate mutase II
1 1 1 0 SCOP 118215 Proton glutamate symport protein
1 1 1 0 SCOP 102588 LmbE-like
1 1 1 1 SCOP 103025 Folate-binding domain
1 1 1 0 SCOP 48295 TrpR-like
1 1 1 1 SCOP 143631 ApbE-like
1 1 1 0 SCOP 101262 Methenyltetrahydrofolate cyclohydrolase-like
1 1 1 1 SCOP 56821 Prismane protein-like
1 1 1 0 SCOP 55785 PYP-like sensor domain (PAS domain)
1 1 1 0 SCOP 143430 TTP0101/SSO1404-like
1 1 1 0 SCOP 50037 C-terminal domain of transcriptional repressors
1 1 1 0 SCOP 117457 FumA C-terminal domain-like
1 1 1 1 SCOP 161070 SNF-like
1 1 1 0 SCOP 56507 Methionine synthase activation domain-like
1 1 1 1 SCOP 110738 Glycerate kinase I
1 1 1 1 SCOP 111326 Urocanase
1 1 1 0 SCOP 50486 FMT C-terminal domain-like
1 1 1 0 SCOP 69754 Ribosome binding protein Y (YfiA homologue)
1 1 1 0 SCOP 50939 Sialidases
1 1 1 1 SCOP 110395 CutC-like
1 1 1 1 SCOP 50974 Nitrous oxide reductase, N-terminal domain
1 1 1 0 SCOP 49452 Starch-binding domain-like
1 1 1 1 SCOP 56091 DNA ligase/mRNA capping enzyme, catalytic domain
1 1 1 0 SCOP 109709 KorB DNA-binding domain-like
1 1 1 0 SCOP 52206 Hypothetical protein MTH538
1 1 1 0 SCOP 50346 PRC-barrel domain
1 1 1 1 SCOP 49367 Superoxide reductase-like
1 1 1 0 SCOP 160980 SSO1389-like
1 1 1 1 SCOP 52490 Tubulin nucleotide-binding domain-like
1 1 1 0 SCOP 111364 Tsx-like channel
1 1 1 1 SCOP 50465 EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain
1 1 1 0 SCOP 47203 Acyl-CoA dehydrogenase C-terminal domain-like
1 1 1 0 SCOP 48498 Tetracyclin repressor-like, C-terminal domain
1 1 1 0 SCOP 50199 Staphylococcal nuclease
1 1 1 0 SCOP 55424 FAD/NAD-linked reductases, dimerisation (C-terminal) domain
1 1 1 0 SCOP 48024 N-terminal domain of DnaB helicase
1 1 1 0 SCOP 143865 CorA soluble domain-like
1 1 1 1 SCOP 48592 GroEL equatorial domain-like
1 1 1 0 SCOP 52200 Toll/Interleukin receptor TIR domain
1 1 1 0 SCOP 57938 DnaJ/Hsp40 cysteine-rich domain
1 1 1 0 SCOP 82114 Riboflavin kinase-like
1 1 1 0 SCOP 46906 Ribosomal protein L11, C-terminal domain
1 1 1 0 SCOP 160443 SMR domain-like
1 1 1 1 SCOP 102645 CoaB-like
1 1 1 0 SCOP 117281 Kelch motif
1 1 1 0 SCOP 49344 CBD9-like
1 1 1 0 SCOP 56014 Nitrite and sulphite reductase 4Fe-4S domain-like
1 1 1 1 SCOP 54821 Ribosomal protein S3 C-terminal domain
1 1 1 0 SCOP 81573 F1F0 ATP synthase subunit B, membrane domain
1 1 1 0 SCOP 52935 PK C-terminal domain-like
1 1 1 0 SCOP 160387 NosL/MerB-like
1 1 1 1 SCOP 52009 Phosphohistidine domain
1 1 1 0 SCOP 109635 DnaK suppressor protein DksA, alpha-hairpin domain
1 1 1 0 SCOP 118116 DNA mismatch repair protein MutL
1 1 1 0 SCOP 81336 F1F0 ATP synthase subunit A
1 1 1 0 SCOP 51344 Epsilon subunit of F1F0-ATP synthase N-terminal domain
1 1 1 0 SCOP 52129 Caspase-like
1 1 1 0 SCOP 51971 Nucleotide-binding domain
1 1 1 1 SCOP 160448 PG1857-like
1 1 1 0 SCOP 55658 L9 N-domain-like
1 1 1 0 SCOP 49265 Fibronectin type III
1 1 1 1 SCOP 68923 PEP carboxykinase N-terminal domain
1 1 1 0 SCOP 56436 C-type lectin-like
1 1 1 0 SCOP 55190 Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain
1 1 1 0 SCOP 69055 1-deoxy-D-xylulose-5-phosphate reductoisomerase, C-terminal domain
1 1 1 0 SCOP 49373 Invasin/intimin cell-adhesion fragments
1 1 1 0 SCOP 58014 Coiled-coil domain of nucleotide exchange factor GrpE
1 1 1 0 SCOP 63999 Thiamin pyrophosphokinase, catalytic domain
1 1 1 0 SCOP 160925 PG1388-like
1 1 1 0 SCOP 55307 Tubulin C-terminal domain-like
1 1 1 1 SCOP 140990 FtsH protease domain-like
1 1 1 1 SCOP 53671 Aspartate/ornithine carbamoyltransferase
1 1 1 0 SCOP 142984 Nqo1 middle domain-like
1 1 1 0 SCOP 48163 An anticodon-binding domain of class I aminoacyl-tRNA synthetases
1 1 1 1 SCOP 52021 Carbamoyl phosphate synthetase, small subunit N-terminal domain
1 1 1 1 SCOP 52029 GroEL apical domain-like
1 1 1 0 SCOP 81891 Poly A polymerase C-terminal region-like
1 1 1 1 SCOP 54810 GMP synthetase C-terminal dimerisation domain
1 1 1 1 SCOP 101904 GyrA/ParC C-terminal domain-like
1 1 1 0 SCOP 57825 Aspartate carbamoyltransferase, Regulatory-chain, C-terminal domain
1 1 1 0 SCOP 57863 ArfGap/RecO-like zinc finger
1 1 1 0 SCOP 81660 Metal cation-transporting ATPase, ATP-binding domain N
1 1 1 0 SCOP 143548 Serine metabolism enzymes domain
1 1 1 0 SCOP 52279 Beta-D-glucan exohydrolase, C-terminal domain
1 1 1 0 SCOP 47364 Domain of the SRP/SRP receptor G-proteins
1 1 1 0 SCOP 48300 Ribosomal protein L7/12, oligomerisation (N-terminal) domain
1 1 1 1 SCOP 100920 Heat shock protein 70kD (HSP70), peptide-binding domain
1 1 1 0 SCOP 141322 NfeD domain-like
1 1 1 0 SCOP 55252 C-terminal domain of arginine repressor
1 1 1 0 SCOP 90002 Hypothetical protein YjiA, C-terminal domain
1 1 1 0 SCOP 144083 Magnesium transport protein CorA, transmembrane region
1 1 1 0 SCOP 46934 UBA-like
1 1 1 0 SCOP 56327 LDH C-terminal domain-like
1 1 1 0 SCOP 49299 PKD domain
1 1 1 0 SCOP 100879 Lesion bypass DNA polymerase (Y-family), little finger domain
1 1 1 0 SCOP 52113 BRCT domain
1 1 1 0 SCOP 141259 CarD-like
1 1 1 0 SCOP 53155 Methylated DNA-protein cysteine methyltransferase domain
1 1 1 0 SCOP 54373 FAD-linked reductases, C-terminal domain
1 1 1 0 SCOP 82861 Mechanosensitive channel protein MscS (YggB), transmembrane region
1 1 1 1 SCOP 52413 UDP-glucose/GDP-mannose dehydrogenase C-terminal domain
1 1 1 0 SCOP 75420 YhbC-like, N-terminal domain
1 1 1 0 SCOP 54752 RecA protein, C-terminal domain
1 1 1 0 SCOP 102735 Trigger factor ribosome-binding domain
1 1 1 1 SCOP 55031 Bacterial exopeptidase dimerisation domain
1 1 1 0 SCOP 46557 GreA transcript cleavage protein, N-terminal domain
1 1 1 1 SCOP 47807 5' to 3' exonuclease, C-terminal subdomain
1 1 1 1 SCOP 47446 Signal peptide-binding domain
1 1 1 0 SCOP 54991 Anticodon-binding domain of PheRS
1 1 1 1 SCOP 55271 DNA repair protein MutS, domain I
1 1 1 0 SCOP 55048 Probable ACP-binding domain of malonyl-CoA ACP transacylase
1 1 1 0 SCOP 47928 N-terminal domain of the delta subunit of the F1F0-ATP synthase
1 1 1 0 SCOP 48108 Carbamoyl phosphate synthetase, large subunit connection domain
1 1 1 1 SCOP 82051 Obg GTP-binding protein N-terminal domain
1 1 1 0 SCOP 54368 Glutamine synthetase, N-terminal domain
1 1 1 0 SCOP 55261 GAD domain-like
1 1 1 1 SCOP 64158 2,3-Bisphosphoglycerate-independent phosphoglycerate mutase, substrate-binding domain
1 1 1 1 SCOP 54747 Ribosomal L11/L12e N-terminal domain
1 1 1 0 SCOP 48168 R1 subunit of ribonucleotide reductase, N-terminal domain
1 1 1 0 SCOP 81886 Helical scaffold and wing domains of SecA
1 1 1 0 SCOP 54849 GroEL-intermediate domain like
1 1 1 1 SCOP 56194 Uridine diphospho-N-Acetylenolpyruvylglucosamine reductase, MurB, C-terminal domain
1 1 1 0 SCOP 89000 post-HMGL domain-like
1 1 1 0 SCOP 52156 Initiation factor IF2/eIF5b, domain 3
1 1 1 0 SCOP 64586 C-terminal domain of ProRS
1 1 1 0 SCOP 51064 Head domain of nucleotide exchange factor GrpE
1 1 1 0 SCOP 55653 Ribosomal protein L9 C-domain
1 1 1 0 SCOP 101790 Aminomethyltransferase beta-barrel domain
1 1 1 0 SCOP 143517 TRCF domain-like
1 1 1 1 SCOP 101353 Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS)
1 1 1 0 SCOP 56553 Insert subdomain of RNA polymerase alpha subunit
1 1 1 0 SCOP 46929 DNA helicase RuvA subunit, C-terminal domain
1 1 1 0 SCOP 54893 Aspartate carbamoyltransferase, Regulatory-chain, N-terminal domain
1 1 1 0 SCOP 54364 Translation initiation factor IF3, N-terminal domain
1 1 1 0 SCOP 69705 Transcription factor NusA, N-terminal domain
1 1 1 1 SCOP 158949 Smr-associated domain-like
1 1 1 0 SCOP 53150 DNA repair protein MutS, domain II
1 1 1 0 SCOP 81767 Pre-protein crosslinking domain of SecA
1 1 1 0 SCOP 81799 Putative methyltransferase TM0872, insert domain
1 1 1 0 SCOP 46915 Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3
1 1 1 0 SCOP 109736 FGAM synthase PurL, linker domain
1 1 1 0 SCOP 158494 PG0775 C-terminal domain-like
1 1 1 0 SCOP 57770 Methionyl-tRNA synthetase (MetRS), Zn-domain
1 1 1 0 SCOP 140657 Hyaluronidase post-catalytic domain-like

Jump to [ Top of page · Assignment statistics ]