SUPERFAMILY 1.75 HMM library and genome assignments server

Drosophila yakuba 1.3 superfamily assignments

Taxonomy
Taxonomy browser entry

Eukaryota; Opisthokonta; Metazoa; Eumetazoa; Bilateria; Protostomia; Ecdysozoa; Panarthropoda; Arthropoda; Mandibulata; Pancrustacea; Hexapoda; Insecta; Dicondylia; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Eremoneura; Cyclorrhapha; Schizophora; Acalyptratae; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophilina; Drosophiliti; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila yakuba

Downloads
Fasta format sequences
Domain assignments


Jump to [ Top of page · Domain assignments ]

Assignment statistics

Sequences: 16082 total
8564 (53 %) with assignment
469 average length
36 % amino acid coverage
Domains: 15072 total
971 unique superfamilies
878 unique families
315 average length
15.5 average superfamily size
94 % formed by duplication
Domain combinations: 1020 domain pairs
3139 unique architectures

Jump to [ Top of page · Assignment statistics ]

Superfamily assignments

Domains

Proteins

Architectures

Families

SCOP link

Superfamilies