SUPERFAMILY 1.75 HMM library and genome assignments server

Drosophila pseudoobscura 2.13 superfamily assignments

Taxonomy
Taxonomy browser entry

Eukaryota; Opisthokonta; Metazoa; Eumetazoa; Bilateria; Protostomia; Ecdysozoa; Panarthropoda; Arthropoda; Mandibulata; Pancrustacea; Hexapoda; Insecta; Dicondylia; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Eremoneura; Cyclorrhapha; Schizophora; Acalyptratae; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophilina; Drosophiliti; Drosophila; Sophophora; obscura group; pseudoobscura subgroup; Drosophila pseudoobscura

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Domain assignments


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Assignment statistics

Sequences: 16265 total
8790 (54 %) with assignment
480 average length
35 % amino acid coverage
Domains: 15498 total
974 unique superfamilies
878 unique families
311 average length
15.9 average superfamily size
94 % formed by duplication
Domain combinations: 1044 domain pairs
3161 unique architectures

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Superfamily assignments

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Proteins

Architectures

Families

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Superfamilies