SUPERFAMILY 1.75 HMM library and genome assignments server

Amycolatopsis mediterranei U32 superfamily assignments

Taxonomy
Taxonomy browser entry

Bacteria; Actinobacteria; Actinobacteria; Actinobacteridae; Actinomycetales; Pseudonocardineae; Pseudonocardiaceae; Amycolatopsis; Amycolatopsis mediterranei; Amycolatopsis mediterranei U32

Downloads
Fasta format sequences
Domain assignments


Jump to [ Top of page · Domain assignments ]

Assignment statistics

Sequences: 9228 total
6733 (73 %) with assignment
329 average length
66 % amino acid coverage
Domains: 9797 total
795 unique superfamilies
614 unique families
299 average length
12.3 average superfamily size
92 % formed by duplication
Domain combinations: 680 domain pairs
1692 unique architectures

Jump to [ Top of page · Assignment statistics ]

Superfamily assignments

Domains

Proteins

Architectures

Families

SCOP link

Superfamilies