SUPERFAMILY 1.75 HMM library and genome assignments server

Linum usitatissimum v200 superfamily assignments

Taxonomy
Taxonomy browser entry

Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Linaceae; Linum; Linum usitatissimum

Downloads
Fasta format sequences
Domain assignments


Jump to [ Top of page · Domain assignments ]

Assignment statistics

Sequences: 43484 total
26434 (61 %) with assignment
399 average length
44 % amino acid coverage
Domains: 37684 total
955 unique superfamilies
797 unique families
289 average length
39.5 average superfamily size
97 % formed by duplication
Domain combinations: 1279 domain pairs
4378 unique architectures

Jump to [ Top of page · Assignment statistics ]

Superfamily assignments

Domains

Proteins

Architectures

Families

SCOP link

Superfamilies