SUPERFAMILY 1.75 HMM library and genome assignments server

Theobroma cacao B97-61/B2 v1 superfamily assignments

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Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Theobroma; Theobroma cacao

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Assignment statistics

Sequences: 46143 total
24090 (52 %) with assignment
384 average length
46 % amino acid coverage
Domains: 35581 total
983 unique superfamilies
826 unique families
335 average length
36.2 average superfamily size
97 % formed by duplication
Domain combinations: 1153 domain pairs
3867 unique architectures

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Superfamily assignments

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