SUPERFAMILY 1.75 HMM library and genome assignments server

Setaria italica v164 superfamily assignments

Taxonomy
Taxonomy browser entry

Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Paniceae; Setaria; Setaria italica

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Domain assignments


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Assignment statistics

Sequences: 40599 total
22288 (55 %) with assignment
377 average length
43 % amino acid coverage
Domains: 31535 total
983 unique superfamilies
805 unique families
294 average length
32.1 average superfamily size
97 % formed by duplication
Domain combinations: 984 domain pairs
3516 unique architectures

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Superfamily assignments

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