SUPERFAMILY 1.75 HMM library and genome assignments server

Oreochromis niloticus 76_1.0 superfamily assignments

Taxonomy
Taxonomy browser entry

Eukaryota; Opisthokonta; Metazoa; Eumetazoa; Bilateria; Deuterostomia; Chordata; Craniata; Vertebrata; Gnathostomata; Teleostomi; Euteleostomi; Actinopterygii; Actinopteri; Neopterygii; Teleostei; Osteoglossocephalai; Clupeocephala; Euteleosteomorpha; Neoteleostei; Eurypterygia; Ctenosquamata; Acanthomorphata; Euacanthomorphacea; Percomorphaceae; Ovalentaria; Cichlomorphae; Cichliformes; Cichlidae; African cichlids; Pseudocrenilabrinae; Oreochromini; Oreochromis; Oreochromis niloticus

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Fasta format sequences
Domain assignments


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Assignment statistics

Sequences: 26763 total
21062 (79 %) with assignment
594 average length
46 % amino acid coverage
Domains: 45961 total
1076 unique superfamilies
1215 unique families
348 average length
42.7 average superfamily size
98 % formed by duplication
Domain combinations: 1505 domain pairs
5039 unique architectures

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Superfamily assignments

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Architectures

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Superfamilies