SUPERFAMILY 1.75 HMM library and genome assignments server

Panicum virgatum v202 superfamily assignments

Taxonomy
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Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Paniceae; Panicum; Panicum virgatum

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Assignment statistics

Sequences: 70071 total
39257 (56 %) with assignment
340 average length
43 % amino acid coverage
Domains: 52694 total
985 unique superfamilies
805 unique families
263 average length
53.5 average superfamily size
98 % formed by duplication
Domain combinations: 990 domain pairs
4281 unique architectures

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Superfamily assignments

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