SUPERFAMILY 1.75 HMM library and genome assignments server

Cucumis sativus v122 superfamily assignments

Taxonomy
Taxonomy browser entry

Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Benincaseae; Cucumis; Cucumis sativus

Downloads
Fasta format sequences
Domain assignments


Jump to [ Top of page · Domain assignments ]

Assignment statistics

Sequences: 30364 total
19414 (64 %) with assignment
405 average length
45 % amino acid coverage
Domains: 27348 total
960 unique superfamilies
819 unique families
285 average length
28.5 average superfamily size
96 % formed by duplication
Domain combinations: 912 domain pairs
3231 unique architectures

Jump to [ Top of page · Assignment statistics ]

Superfamily assignments

Domains

Proteins

Architectures

Families

SCOP link

Superfamilies