SUPERFAMILY 1.75 HMM library and genome assignments server

Astyanax mexicanus 76 superfamily assignments

Taxonomy
Taxonomy browser entry

Eukaryota; Opisthokonta; Metazoa; Eumetazoa; Bilateria; Deuterostomia; Chordata; Craniata; Vertebrata; Gnathostomata; Teleostomi; Euteleostomi; Actinopterygii; Actinopteri; Neopterygii; Teleostei; Osteoglossocephalai; Clupeocephala; Otomorpha; Ostariophysi; Otophysa; Characiphysae; Characiformes; Characoidei; Characidae; Characidae incertae sedis; Astyanax clade; Astyanax; Astyanax mexicanus

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Assignment statistics

Sequences: 23698 total
17495 (74 %) with assignment
532 average length
44 % amino acid coverage
Domains: 35770 total
1072 unique superfamilies
1203 unique families
318 average length
33.4 average superfamily size
97 % formed by duplication
Domain combinations: 1461 domain pairs
5239 unique architectures

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Superfamily assignments

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