SUPERFAMILY 1.75 HMM library and genome assignments server

Domain combination pairs in Xanthomonas axonopodis pv. citri str. 306

All pairs of domain combinations at the superfamily level are listed here.
The identification of domain pairs does not account for the possibility of non-contiguous domains. Inserted, or interlaced, domains are seen as having a simple pair ordering.

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Domain combination pairs

773 domain combination pairs.
Click on a column heading to sort that column, or the 'View' button to see domain architetures for that domain pair combination.

Superfamily (N) Superfamily (C) Number of occurrances Number unique
Homodimeric domain of signal transducing histidine kinase ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 4929
"Winged helix" DNA-binding domain Periplasmic binding protein-like II 332
P-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases 2316
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase CheY-like 2119
Homodimeric domain of signal transducing histidine kinase CheY-like 2018
CheY-like C-terminal effector domain of the bipartite response regulators 181
PYP-like sensor domain (PAS domain) ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 1714
Thioredoxin-like GST C-terminal domain-like 151
NAD(P)-binding Rossmann-fold domains 6-phosphogluconate dehydrogenase C-terminal domain-like 155
PYP-like sensor domain (PAS domain) Homodimeric domain of signal transducing histidine kinase 1512
Multidrug efflux transporter AcrB transmembrane domain Multidrug efflux transporter AcrB transmembrane domain 146
GroES-like NAD(P)-binding Rossmann-fold domains 142
Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains 135
Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains 135
Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains Multidrug efflux transporter AcrB transmembrane domain 135
HAMP domain-like Methyl-accepting chemotaxis protein (MCP) signaling domain 133
Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains Multidrug efflux transporter AcrB transmembrane domain 135
ABC transporter transmembrane region P-loop containing nucleoside triphosphate hydrolases 122
Actin-like ATPase domain Actin-like ATPase domain 125
Sigma2 domain of RNA polymerase sigma factors Sigma3 and sigma4 domains of RNA polymerase sigma factors 123
Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains 124
Homeodomain-like Tetracyclin repressor-like, C-terminal domain 111
NAD(P)-binding Rossmann-fold domains Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 114
Multidrug resistance efflux transporter EmrE Multidrug resistance efflux transporter EmrE 112
PYP-like sensor domain (PAS domain) PYP-like sensor domain (PAS domain) 1111
(Trans)glycosidases Glycosyl hydrolase domain 116
Nucleotide cyclase EAL domain-like 1110
PYP-like sensor domain (PAS domain) CheY-like 1010
PreATP-grasp domain Glutathione synthetase ATP-binding domain-like 106
lambda repressor-like DNA-binding domains Periplasmic binding protein-like I 101
GAF domain-like Nucleotide cyclase 106
P-loop containing nucleoside triphosphate hydrolases Homeodomain-like 97
DPP6 N-terminal domain-like alpha/beta-Hydrolases 92
FAD/NAD(P)-binding domain FAD-linked reductases, C-terminal domain 94
Homeodomain-like Homeodomain-like 86
Acyl-CoA dehydrogenase NM domain-like Acyl-CoA dehydrogenase C-terminal domain-like 82
Riboflavin synthase domain-like Ferredoxin reductase-like, C-terminal NADP-linked domain 83
P-loop containing nucleoside triphosphate hydrolases Translation proteins 76
TPR-like TPR-like 76
Histidine-containing phosphotransfer domain, HPT domain ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 75
Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) 75
Galactose-binding domain-like (Trans)glycosidases 74
Starch-binding domain-like Porins 71
Thiolase-like Thiolase-like 71
Metallo-dependent hydrolases Composite domain of metallo-dependent hydrolases 73
Nucleotidylyl transferase Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 65
Alpha-L RNA-binding motif Pseudouridine synthase 62
Phospholipase D/nuclease Phospholipase D/nuclease 64
Glutathione synthetase ATP-binding domain-like Rudiment single hybrid motif 63
MurD-like peptide ligases, catalytic domain MurD-like peptide ligases, peptide-binding domain 65
CheY-like CheY-like 66
PYP-like sensor domain (PAS domain) Nucleotide cyclase 66
PreATP-grasp domain Rudiment single hybrid motif 63
Histidine-containing phosphotransfer domain, HPT domain Homodimeric domain of signal transducing histidine kinase 64
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase Ribosomal protein S5 domain 2-like 55
Aminoacid dehydrogenase-like, N-terminal domain NAD(P)-binding Rossmann-fold domains 53
Enolase N-terminal domain-like Enolase C-terminal domain-like 51
CheY-like Homeodomain-like 53
E set domains (Trans)glycosidases 53
PYP-like sensor domain (PAS domain) GAF domain-like 55
Thiamin diphosphate-binding fold (THDP-binding) TK C-terminal domain-like 54
CheY-like P-loop containing nucleoside triphosphate hydrolases 53
(Trans)glycosidases Beta-D-glucan exohydrolase, C-terminal domain 53
CheY-like Histidine-containing phosphotransfer domain, HPT domain 54
Formate/glycerate dehydrogenase catalytic domain-like NAD(P)-binding Rossmann-fold domains 52
Lysozyme-like PGBD-like 54
Calcium-dependent phosphotriesterase Calcium-dependent phosphotriesterase 55
ACT-like ACT-like 44
PA domain Zn-dependent exopeptidases 42
Calcium-dependent phosphotriesterase Nucleotide cyclase 44
P-loop containing nucleoside triphosphate hydrolases Ribosomal protein S5 domain 2-like 44
CheY-like Nucleotide cyclase 44
Nucleic acid-binding proteins Nucleic acid-binding proteins 43
PYP-like sensor domain (PAS domain) EAL domain-like 44
CheY-like EAL domain-like 44
Zn-dependent exopeptidases Bacterial exopeptidase dimerisation domain 41
N-terminal nucleophile aminohydrolases (Ntn hydrolases) Adenine nucleotide alpha hydrolases-like 41
Arabinanase/levansucrase/invertase Concanavalin A-like lectins/glucanases 41
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase CheW-like 43
P-loop containing nucleoside triphosphate hydrolases EF-G C-terminal domain-like 44
PLP-binding barrel Alanine racemase C-terminal domain-like 44
Histidine-containing phosphotransfer domain, HPT domain CheW-like 43
E set domains Glycosyl hydrolase domain 42
Triger factor/SurA peptide-binding domain-like FKBP-like 44
EspE N-terminal domain-like P-loop containing nucleoside triphosphate hydrolases 42
beta-Galactosidase/glucuronidase domain (Trans)glycosidases 42
Calcium-dependent phosphotriesterase ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 44
GAF domain-like ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 44
Nucleic acid-binding proteins Class II aaRS and biotin synthetases 43
Galactose-binding domain-like beta-Galactosidase/glucuronidase domain 42
GAF domain-like Homodimeric domain of signal transducing histidine kinase 44
Acetyl-CoA synthetase-like ACP-like 33
FAD/NAD(P)-binding domain FAD/NAD-linked reductases, dimerisation (C-terminal) domain 32
Nucleotidyltransferase HD-domain/PDEase-like 32
CoA-dependent acyltransferases CoA-dependent acyltransferases 33
Single hybrid motif CoA-dependent acyltransferases 33
Glutamine synthetase, N-terminal domain Glutamine synthetase/guanido kinase 31
P-loop containing nucleoside triphosphate hydrolases MOP-like 31
Riboflavin synthase domain-like 2Fe-2S ferredoxin-like 31
Galactose-binding domain-like Galactose-binding domain-like 32
"Winged helix" DNA-binding domain GAF domain-like 31
ACP-like CoA-dependent acyltransferases 33
Nucleic acid-binding proteins RuvA domain 2-like 33
Protease propeptides/inhibitors Subtilisin-like 32
6-phosphogluconate dehydrogenase C-terminal domain-like UDP-glucose/GDP-mannose dehydrogenase C-terminal domain 31
P-loop containing nucleoside triphosphate hydrolases post-AAA+ oligomerization domain-like 32
ValRS/IleRS/LeuRS editing domain Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 32
"Winged helix" DNA-binding domain "Winged helix" DNA-binding domain 33
"Winged helix" DNA-binding domain Chorismate lyase-like 31
Calcium-dependent phosphotriesterase Homodimeric domain of signal transducing histidine kinase 33
Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex CoA-dependent acyltransferases 33
Single hybrid motif Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex 33
PDZ domain-like PDZ domain-like 32
Sensory domain-like HAMP domain-like 33
Leukotriene A4 hydrolase N-terminal domain Metalloproteases ("zincins"), catalytic domain 32
P-loop containing nucleoside triphosphate hydrolases EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 32
PurM N-terminal domain-like PurM C-terminal domain-like 32
Phosphoglucomutase, first 3 domains Phosphoglucomutase, first 3 domains 31
Phosphoglucomutase, first 3 domains Phosphoglucomutase, C-terminal domain 31
HD-domain/PDEase-like ACT-like 32
Ferredoxin reductase-like, C-terminal NADP-linked domain 2Fe-2S ferredoxin-like 31
Nucleotidyltransferase ACT-like 32
Aconitase iron-sulfur domain LeuD/IlvD-like 33
ISP domain Bet v1-like 31
Translation proteins EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 32
Translation proteins SH3-like domain Nucleic acid-binding proteins 32
Phosphohistidine domain Phosphoenolpyruvate/pyruvate domain 33
Homodimeric domain of signal transducing histidine kinase CheW-like 32
Acetyl-CoA synthetase-like CoA-dependent acyltransferases 33
Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like 33
ValRS/IleRS/LeuRS editing domain Nucleotidylyl transferase 32
Flavoproteins Riboflavin synthase domain-like 31
(Trans)glycosidases Anthrax protective antigen 32
HlyD-like secretion proteins HlyD-like secretion proteins 33
EF-G C-terminal domain-like EF-G C-terminal domain-like 33
Calcium-dependent phosphotriesterase CheY-like 33
DNA ligase/mRNA capping enzyme, catalytic domain Nucleic acid-binding proteins 33
ACT-like NAD(P)-binding Rossmann-fold domains 33
Lysozyme-like beta-lactamase/transpeptidase-like 32
"Winged helix" DNA-binding domain Dimeric alpha+beta barrel 31
CheY-like HD-domain/PDEase-like 32
Translation proteins EF-G C-terminal domain-like 33
CBS-domain pair FAD-binding/transporter-associated domain-like 31
NAD(P)-binding Rossmann-fold domains UDP-glucose/GDP-mannose dehydrogenase C-terminal domain 31
Double Clp-N motif P-loop containing nucleoside triphosphate hydrolases 32
TPR-like P-loop containing nucleoside triphosphate hydrolases 33
beta-N-acetylhexosaminidase-like domain (Trans)glycosidases 32
Chemotaxis receptor methyltransferase CheR, N-terminal domain S-adenosyl-L-methionine-dependent methyltransferases 32
Class II aaRS and biotin synthetases Class II aaRS ABD-related 33
GAF domain-like EAL domain-like 32
Flavoproteins Ferredoxin reductase-like, C-terminal NADP-linked domain 31
Diaminopimelate epimerase-like Diaminopimelate epimerase-like 31
Resolvase-like Homeodomain-like 21
GreA transcript cleavage protein, N-terminal domain FKBP-like 21
Nucleotide-diphospho-sugar transferases Nucleotide-diphospho-sugar transferases 22
IlvD/EDD N-terminal domain-like LeuD/IlvD-like 21
N-terminal domain of alpha and beta subunits of F1 ATP synthase P-loop containing nucleoside triphosphate hydrolases 21
Sm-like ribonucleoproteins Mechanosensitive channel protein MscS (YggB), C-terminal domain 21
Cytochrome c oxidase subunit II-like, transmembrane region Cupredoxins 22
MurCD N-terminal domain MurD-like peptide ligases, catalytic domain 21
NAD(P)-binding Rossmann-fold domains LDH C-terminal domain-like 22
RmlC-like cupins Homeodomain-like 21
beta-Galactosidase/glucuronidase domain beta-Galactosidase/glucuronidase domain 21
MurCD N-terminal domain MurD-like peptide ligases, peptide-binding domain 21
Galactose-binding domain-like SGNH hydrolase 21
MgtE N-terminal domain-like MgtE membrane domain-like 21
MoeA N-terminal region -like Molybdenum cofactor biosynthesis proteins 21
N-terminal domain of MutM-like DNA repair proteins S13-like H2TH domain 22
FAD-binding/transporter-associated domain-like FAD-linked oxidases, C-terminal domain 21
Subtilisin-like Autotransporter 21
Nucleotidyltransferase Nucleotidyltransferase substrate binding subunit/domain 22
Glutathione synthetase ATP-binding domain-like Single hybrid motif 22
HSP40/DnaJ peptide-binding domain HSP40/DnaJ peptide-binding domain 22
CorA soluble domain-like Magnesium transport protein CorA, transmembrane region 21
Rudiment single hybrid motif Single hybrid motif 22
EF-G C-terminal domain-like Ribosomal protein S5 domain 2-like 22
"Winged helix" DNA-binding domain LexA/Signal peptidase 21
Pectin lyase-like Pectin lyase-like 22
Carbamate kinase-like ACT-like 22
Glutathione synthetase ATP-binding domain-like Succinyl-CoA synthetase domains 22
CheW-like CheY-like 22
Glucocorticoid receptor-like (DNA-binding domain) P-loop containing nucleoside triphosphate hydrolases 22
Ribosomal protein S5 domain 2-like Type II DNA topoisomerase 22
GAF domain-like CheY-like 22
cAMP-binding domain-like "Winged helix" DNA-binding domain 21
MoeA N-terminal region -like MoeA C-terminal domain-like 21
PreATP-grasp domain Single hybrid motif 22
Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain Phosphohistidine domain 22
FAD/NAD(P)-binding domain HI0933 insert domain-like 21
P-loop containing nucleoside triphosphate hydrolases Class I glutamine amidotransferase-like 21
L30e-like alpha/beta knot 21
Trypsin-like serine proteases PDZ domain-like 21
Beta-D-glucan exohydrolase, C-terminal domain Anthrax protective antigen 21
TGS-like ACT-like 21
CoA-dependent acyltransferases alpha/beta-Hydrolases 22
N-terminal domain of alpha and beta subunits of F1 ATP synthase C-terminal domain of alpha and beta subunits of F1 ATP synthase 21
Mechanosensitive channel protein MscS (YggB), transmembrane region Sm-like ribonucleoproteins 21
RuvA domain 2-like RuvA domain 2-like 22
PDZ domain-like ClpP/crotonase 21
Lysozyme-like LysM domain 21
ClpP/crotonase 6-phosphogluconate dehydrogenase C-terminal domain-like 22
CheY-like Methylesterase CheB, C-terminal domain 22
Nucleotide-diphospho-sugar transferases UDP-Glycosyltransferase/glycogen phosphorylase 22
Formate dehydrogenase/DMSO reductase, domains 1-3 ADC-like 22
MurE/MurF N-terminal domain MurD-like peptide ligases, catalytic domain 22
Galactose-binding domain-like Six-hairpin glycosidases 22
MgtE N-terminal domain-like CBS-domain pair 21
Adhesin YadA, collagen-binding domain Pili subunits 22
Ribosomal protein S5 domain 2-like GHMP Kinase, C-terminal domain 21
Sensory domain-like ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 22
Type II DNA topoisomerase GyrA/ParC C-terminal domain-like 22
MurE/MurF N-terminal domain MurD-like peptide ligases, peptide-binding domain 22
TPR-like C-terminal effector domain of the bipartite response regulators 22
HD-domain/PDEase-like TGS-like 21
P-loop containing nucleoside triphosphate hydrolases "Winged helix" DNA-binding domain 22
GroES-like GroES-like 21
GAF domain-like GAF domain-like 22
NAD(P)-binding Rossmann-fold domains Tetrapyrrole methylase 22
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase Type II DNA topoisomerase 22
HAMP domain-like Homodimeric domain of signal transducing histidine kinase 21
P-loop containing nucleoside triphosphate hydrolases ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 22
P-loop containing nucleoside triphosphate hydrolases Homodimeric domain of signal transducing histidine kinase 22
"Winged helix" DNA-binding domain GntR ligand-binding domain-like 21
PYP-like sensor domain (PAS domain) Homeodomain-like 21
Peptidase/esterase 'gauge' domain alpha/beta-Hydrolases 21
Nucleotidyltransferase Poly A polymerase C-terminal region-like 21
Mechanosensitive channel protein MscS (YggB), transmembrane region Mechanosensitive channel protein MscS (YggB), C-terminal domain 21
Nucleotide cyclase TPR-like 22
Sigma3 and sigma4 domains of RNA polymerase sigma factors Sigma3 and sigma4 domains of RNA polymerase sigma factors 22
Creatinase/prolidase N-terminal domain Creatinase/aminopeptidase 21
Adhesin YadA, collagen-binding domain Adhesin YadA, collagen-binding domain 22
HAMP domain-like ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 21
PIN domain-like 5' to 3' exonuclease, C-terminal subdomain 22
Nicotinate/Quinolinate PRTase N-terminal domain-like Nicotinate/Quinolinate PRTase C-terminal domain-like 21
2Fe-2S ferredoxin-like CO dehydrogenase ISP C-domain like 22
Acetyl-CoA synthetase-like alpha/beta-Hydrolases 22
ClpP/crotonase ClpP/crotonase 22
Penicillin binding protein dimerisation domain beta-lactamase/transpeptidase-like 21
PYP-like sensor domain (PAS domain) Methyl-accepting chemotaxis protein (MCP) signaling domain 22
Quinoprotein alcohol dehydrogenase-like Calcium-dependent phosphotriesterase 22
P-loop containing nucleoside triphosphate hydrolases C-terminal domain of alpha and beta subunits of F1 ATP synthase 21
beta-Roll beta-Roll 22
alpha/beta-Hydrolases alpha/beta-Hydrolases 21
6-phosphogluconate dehydrogenase C-terminal domain-like 6-phosphogluconate dehydrogenase C-terminal domain-like 22
FabD/lysophospholipase-like Probable ACP-binding domain of malonyl-CoA ACP transacylase 21
P-loop containing nucleoside triphosphate hydrolases C-terminal effector domain of the bipartite response regulators 22
tRNA-binding arm Class II aaRS and biotin synthetases 21
Fe,Mn superoxide dismutase (SOD), N-terminal domain Fe,Mn superoxide dismutase (SOD), C-terminal domain 21
Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain Phosphoenolpyruvate/pyruvate domain 22
Ribosomal protein S5 domain 2-like Ribonuclease PH domain 2-like 22
NAD(P)-binding Rossmann-fold domains Succinyl-CoA synthetase domains 22
alpha/beta-Hydrolases Galactose-binding domain-like 22
FAD-binding/transporter-associated domain-like CO dehydrogenase flavoprotein C-terminal domain-like 21
P-loop containing nucleoside triphosphate hydrolases Restriction endonuclease-like 22
Thiamin diphosphate-binding fold (THDP-binding) DHS-like NAD/FAD-binding domain 21
HAMP domain-like Nucleotide cyclase 22
CBS-domain pair MgtE membrane domain-like 21
Molybdenum cofactor biosynthesis proteins MoeA C-terminal domain-like 21
Sensory domain-like Homodimeric domain of signal transducing histidine kinase 22
HAMP domain-like EAL domain-like 22
Chaperone J-domain HSP40/DnaJ peptide-binding domain 22
Nucleic acid-binding proteins P-loop containing nucleoside triphosphate hydrolases 22
Subtilisin-like Galactose-binding domain-like 21
ThrRS/AlaRS common domain Class II aaRS and biotin synthetases 22
ACP-like alpha/beta-Hydrolases 22
Nucleotidyltransferase TGS-like 21
lambda integrase-like, N-terminal domain DNA breaking-rejoining enzymes 22
"Winged helix" DNA-binding domain Actin-like ATPase domain 21
CO dehydrogenase molybdoprotein N-domain-like Molybdenum cofactor-binding domain 21
ClpP/crotonase NAD(P)-binding Rossmann-fold domains 22
Galactose mutarotase-like Anthrax protective antigen 11
PurM C-terminal domain-like PurM C-terminal domain-like 11
Methylesterase CheB, C-terminal domain PYP-like sensor domain (PAS domain) 11
Metalloproteases ("zincins"), catalytic domain PDZ domain-like 11
Nucleic acid-binding proteins Prokaryotic type KH domain (KH-domain type II) 11
Putative DNA-binding domain Class II aaRS and biotin synthetases 11
Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases Nucleic acid-binding proteins 11
Radical SAM enzymes RuvA domain 2-like 11
Glutathione synthetase ATP-binding domain-like Acyl-CoA N-acyltransferases (Nat) 11
PHP domain-like Nucleic acid-binding proteins 11
Class I glutamine amidotransferase-like GMP synthetase C-terminal dimerisation domain 11
Eukaryotic type KH-domain (KH-domain type I) Nucleic acid-binding proteins 11
2Fe-2S ferredoxin-like Formate dehydrogenase/DMSO reductase, domains 1-3 11
P-loop containing nucleoside triphosphate hydrolases Signal peptide-binding domain 11
alpha/beta-Hydrolases Subtilisin-like 11
Thiol:disulfide interchange protein DsbD, N-terminal domain (DsbD-alpha) Thioredoxin-like 11
Putative DNA-binding domain Initiation factor IF2/eIF5b, domain 3 11
UBA-like Elongation factor Ts (EF-Ts), dimerisation domain 11
GAF domain-like Homeodomain-like 11
S-adenosyl-L-methionine-dependent methyltransferases PYP-like sensor domain (PAS domain) 11
Glycosyl hydrolase domain Protein kinase-like (PK-like) 11
Quinoprotein alcohol dehydrogenase-like Quinoprotein alcohol dehydrogenase-like 11
Nucleotide-binding domain FAD/NAD(P)-binding domain 11
Rhodanese/Cell cycle control phosphatase Activating enzymes of the ubiquitin-like proteins 11
PLP-dependent transferases PLP-dependent transferases 11
Pheromone-binding domain of LuxR-like quorum-sensing transcription factors C-terminal effector domain of the bipartite response regulators 11
HprK N-terminal domain-like PEP carboxykinase-like 11
TrkA C-terminal domain-like TrkA C-terminal domain-like 11
Nitrite/Sulfite reductase N-terminal domain-like Nitrite and sulphite reductase 4Fe-4S domain-like 11
Homeodomain-like DNA-glycosylase 11
MesJ substrate recognition domain-like PheT/TilS domain 11
HAD-like Calcium ATPase, transmembrane domain M 11
P-loop containing nucleoside triphosphate hydrolases FtsH protease domain-like 11
Pre-protein crosslinking domain of SecA Helical scaffold and wing domains of SecA 11
Glutathione synthetase ATP-binding domain-like Phosphoenolpyruvate/pyruvate domain 11
Aminoacid dehydrogenase-like, N-terminal domain Isocitrate/Isopropylmalate dehydrogenase-like 11
vWA-like TPR-like 11
Nucleotidylyl transferase Alpha-L RNA-binding motif 11
Homeodomain-like TATA-box binding protein-like 11
PGBD-like Galactose mutarotase-like 11
Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 Eukaryotic type KH-domain (KH-domain type I) 11
Ribosomal protein S5 domain 2-like Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 11
Ribosomal protein L6 Ribosomal protein L6 11
Periplasmic binding protein-like II Ankyrin repeat 11
ACT-like Alanine racemase C-terminal domain-like 11
LuxS/MPP-like metallohydrolase LuxS/MPP-like metallohydrolase 11
Trigger factor ribosome-binding domain FKBP-like 11
GAF domain-like P-loop containing nucleoside triphosphate hydrolases 11
Glutathione synthetase ATP-binding domain-like Cyclophilin-like 11
CalX-like DNase I-like 11
Nucleotide-diphospho-sugar transferases PilZ domain-like 11
DPP6 N-terminal domain-like YVTN repeat-like/Quinoprotein amine dehydrogenase 11
Obg GTP-binding protein N-terminal domain P-loop containing nucleoside triphosphate hydrolases 11
DNA-glycosylase Nudix 11
YhbC-like, N-terminal domain YhbC-like, C-terminal domain 11
Rho N-terminal domain-like P-loop containing nucleoside triphosphate hydrolases 11
DNA repair protein MutS, domain I DNA repair protein MutS, domain II 11
Zinc beta-ribbon DNA primase DnaG, C-terminal domain 11
Nucleotidylyl transferase Ribosomal protein L25-like 11
Homo-oligomeric flavin-containing Cys decarboxylases, HFCD CoaB-like 11
PTS system IIB component-like PTS system IIB component-like 11
Formyltransferase FMT C-terminal domain-like 11
Translation proteins Translation proteins 11
S-adenosyl-L-methionine-dependent methyltransferases Putative methyltransferase TM0872, insert domain 11
Cytidine deaminase-like Dihydrofolate reductase-like 11
PheT/TilS domain Class II aaRS and biotin synthetases 11
Positive stranded ssRNA viruses DNase I-like 11
Transmembrane di-heme cytochromes a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) 11
FGAM synthase PurL, linker domain PurM C-terminal domain-like 11
PurS-like PurM N-terminal domain-like 11
PUA domain-like P-loop containing nucleoside triphosphate hydrolases 11
Nucleic acid-binding proteins Anticodon-binding domain of PheRS 11
4Fe-4S ferredoxins ADC-like 11
TSP type-3 repeat OmpA-like 11
Prokaryotic type KH domain (KH-domain type II) Rad51 N-terminal domain-like 11
FAD/NAD(P)-binding domain Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain 11
Quinoprotein alcohol dehydrogenase-like Nucleotide cyclase 11
PH0987 N-terminal domain-like Single hybrid motif 11
Nucleotidylyl transferase An anticodon-binding domain of class I aminoacyl-tRNA synthetases 11
TK C-terminal domain-like Pyruvate-ferredoxin oxidoreductase, PFOR, domain III 11
Rudiment single hybrid motif Cyclophilin-like 11
Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 1-deoxy-D-xylulose-5-phosphate reductoisomerase, C-terminal domain 11
TolB, N-terminal domain Tricorn protease N-terminal domain 11
HRDC-like HRDC-like 11
Epsilon subunit of F1F0-ATP synthase N-terminal domain Epsilon subunit of F1F0-ATP synthase C-terminal domain 11
Sensory domain-like EAL domain-like 11
P-loop containing nucleoside triphosphate hydrolases Prokaryotic type KH domain (KH-domain type II) 11
4'-phosphopantetheinyl transferase 4'-phosphopantetheinyl transferase 11
S-adenosylmethionine synthetase S-adenosylmethionine synthetase 11
FAD/NAD(P)-binding domain FAD/NAD(P)-binding domain 11
Ada DNA repair protein, N-terminal domain (N-Ada 10) DNA-glycosylase 11
DNase I-like Mannose-binding lectins 11
PheT/TilS domain Anticodon-binding domain of PheRS 11
PreATP-grasp domain Methylglyoxal synthase-like 11
Aconitase B, N-terminal domain LeuD/IlvD-like 11
5' to 3' exonuclease, C-terminal subdomain Ribonuclease H-like 11
Methyl-accepting chemotaxis protein (MCP) signaling domain Methyl-accepting chemotaxis protein (MCP) signaling domain 11
HPr-like Phosphohistidine domain 11
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase HSP90 C-terminal domain 11
Phage tail proteins gp5 N-terminal domain-like 11
Leukotriene A4 hydrolase N-terminal domain ARM repeat 11
Cation efflux protein transmembrane domain-like Cation efflux protein cytoplasmic domain-like 11
Caspase-like TPR-like 11
beta-lactamase/transpeptidase-like Penicillin-binding protein associated domain 11
Glutathione synthetase ATP-binding domain-like Carbamoyl phosphate synthetase, large subunit connection domain 11
Cadherin-like Cadherin-like 11
S13-like H2TH domain Glucocorticoid receptor-like (DNA-binding domain) 11
beta-Roll Cadherin-like 11
HD-domain/PDEase-like Nucleotide cyclase 11
Dihydropteroate synthetase-like Cobalamin (vitamin B12)-binding domain 11
2Fe-2S ferredoxin-like 4Fe-4S ferredoxins 11
DNA repair protein MutS, domain II P-loop containing nucleoside triphosphate hydrolases 11
Ribosomal protein L7/12, oligomerisation (N-terminal) domain ClpS-like 11
Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) Translation proteins 11
GroEL equatorial domain-like GroEL apical domain-like 11
Nucleotidylyl transferase Nudix 11
Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain Nucleotidylyl transferase 11
Methionyl-tRNA synthetase (MetRS), Zn-domain Nucleotidylyl transferase 11
CheC-like Surface presentation of antigens (SPOA) 11
HPr-like Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain 11
P-loop containing nucleoside triphosphate hydrolases TrpR-like 11
all-alpha NTP pyrophosphatases all-alpha NTP pyrophosphatases 11
Zinc beta-ribbon Prokaryotic SH3-related domain 11
Glycoside hydrolase/deacetylase Caspase-like 11
ACT-like PLP-binding barrel 11
Glutathione synthetase ATP-binding domain-like PH0987 N-terminal domain-like 11
Chemotaxis receptor methyltransferase CheR, N-terminal domain PYP-like sensor domain (PAS domain) 11
Ada DNA repair protein, N-terminal domain (N-Ada 10) Homeodomain-like 11
NAD(P)-binding Rossmann-fold domains Isocitrate/Isopropylmalate dehydrogenase-like 11
Carbamate kinase-like PLP-binding barrel 11
CBS-domain pair Inosine monophosphate dehydrogenase (IMPDH) 11
PrpR receptor domain-like P-loop containing nucleoside triphosphate hydrolases 11
YjeF N-terminal domain-like Ribokinase-like 11
C-terminal effector domain of the bipartite response regulators YVTN repeat-like/Quinoprotein amine dehydrogenase 11
PUA domain-like Ribosomal protein S5 domain 2-like 11
Elongation factor Ts (EF-Ts), dimerisation domain Elongation factor Ts (EF-Ts), dimerisation domain 11
PK beta-barrel domain-like PK C-terminal domain-like 11
P-loop containing nucleoside triphosphate hydrolases Adenine nucleotide alpha hydrolases-like 11
DNA methylase specificity domain DNA methylase specificity domain 11
Adenine nucleotide alpha hydrolases-like MesJ substrate recognition domain-like 11
YbaK/ProRS associated domain Class II aaRS ABD-related 11
SGNH hydrolase SGNH hydrolase 11
TGS-like Class II aaRS ABD-related 11
Glutamyl tRNA-reductase catalytic, N-terminal domain NAD(P)-binding Rossmann-fold domains 11
4Fe-4S ferredoxins Formate dehydrogenase/DMSO reductase, domains 1-3 11
P-loop containing nucleoside triphosphate hydrolases Pre-protein crosslinking domain of SecA 11
CheY-like Tetrapyrrole methylase 11
DNA ligase/mRNA capping enzyme, catalytic domain BRCT domain 11
DnaJ/Hsp40 cysteine-rich domain HSP40/DnaJ peptide-binding domain 11
Class II aaRS and biotin synthetases Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) 11
Phoshotransferase/anion transport protein Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain 11
PUA domain-like S-adenosyl-L-methionine-dependent methyltransferases 11
DNA repair protein MutS, domain I DNA repair protein MutS, domain III 11
MFS general substrate transporter MFS general substrate transporter 11
Nqo1 middle domain-like Nqo1C-terminal domain-like 11
Single hybrid motif Single hybrid motif 11
C-terminal UvrC-binding domain of UvrB RuvA domain 2-like 11
Ribonuclease PH domain 2-like Nucleic acid-binding proteins 11
cAMP-binding domain-like FAD/NAD(P)-binding domain 11
Nucleic acid-binding proteins ArfGap/RecO-like zinc finger 11
Class II aaRS and biotin synthetases Anticodon-binding domain of PheRS 11
"Winged helix" DNA-binding domain Class II aaRS and biotin synthetases 11
Nqo1 FMN-binding domain-like Nqo1C-terminal domain-like 11
PHP14-like Phospholipase D/nuclease 11
Calcium ATPase, transduction domain A Calcium ATPase, transmembrane domain M 11
GspK insert domain-like GspK insert domain-like 11
PurS-like PurM C-terminal domain-like 11
P-loop containing nucleoside triphosphate hydrolases Initiation factor IF2/eIF5b, domain 3 11
Actin-like ATPase domain Heat shock protein 70kD (HSP70), peptide-binding domain 11
PurM C-terminal domain-like Class I glutamine amidotransferase-like 11
Carbamoyl phosphate synthetase, large subunit connection domain Methylglyoxal synthase-like 11
Coiled-coil domain of nucleotide exchange factor GrpE Head domain of nucleotide exchange factor GrpE 11
HesB-like domain Fe-S cluster assembly (FSCA) domain-like 11
GroEL equatorial domain-like GroEL-intermediate domain like 11
Cobalamin (vitamin B12)-binding domain Methionine synthase activation domain-like 11
Chorismate mutase II Periplasmic binding protein-like II 11
OMPA-like OmpA-like 11
Class II aaRS and biotin synthetases Translation proteins 11
FliG FliG 11
YgfB-like Sec-C motif 11
S-adenosyl-L-methionine-dependent methyltransferases S-adenosyl-L-methionine-dependent methyltransferases 11
CarD-like TRCF domain-like 11
Periplasmic binding protein-like II ACT-like 11
Chaperone J-domain DnaJ/Hsp40 cysteine-rich domain 11
Anthrax protective antigen Glycosyl hydrolase domain 11
Acetyl-CoA synthetase-like Acetyl-CoA synthetase-like 11
Ribonuclease H-like RuvA domain 2-like 11
RuvA domain 2-like BRCT domain 11
S-adenosyl-L-methionine-dependent methyltransferases NAD(P)-binding Rossmann-fold domains 11
Carbamate kinase-like Alanine racemase C-terminal domain-like 11
Single hybrid motif FAD/NAD(P)-binding domain 11
Nucleic acid-binding proteins DNA helicase RuvA subunit, C-terminal domain 11
DnaK suppressor protein DksA, alpha-hairpin domain Glucocorticoid receptor-like (DNA-binding domain) 11
Cyclophilin-like PH0987 N-terminal domain-like 11
Ada DNA repair protein, N-terminal domain (N-Ada 10) TATA-box binding protein-like 11
Translation proteins PRC-barrel domain 11
Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain 11
Periplasmic binding protein-like II MetI-like 11
Prokaryotic type KH domain (KH-domain type II) Prokaryotic type KH domain (KH-domain type II) 11
Fibronectin type III Fibronectin type III 11
PheT/TilS domain Putative DNA-binding domain 11
Glutathione synthetase ATP-binding domain-like Phosphohistidine domain 11
RmlC-like cupins RmlC-like cupins 11
Carboxypeptidase regulatory domain-like Porins 11
Rad51 N-terminal domain-like Rad51 N-terminal domain-like 11
Nudix Thiamin phosphate synthase 11
Smc hinge domain Tropomyosin 11
HD-domain/PDEase-like P-loop containing nucleoside triphosphate hydrolases 11
Porins Porins 11
Regulatory protein AraC Homeodomain-like 11
2Fe-2S ferredoxin-like ADC-like 11
Dihydropteroate synthetase-like Methionine synthase domain 11
NAD(P)-binding Rossmann-fold domains Acyl-CoA N-acyltransferases (Nat) 11
Nucleotide-diphospho-sugar transferases Trimeric LpxA-like enzymes 11
Protein kinase-like (PK-like) C-type lectin-like 11
Nucleotidylyl transferase Riboflavin kinase-like 11
alpha-helical ferredoxin Nucleotide-binding domain 11
TPR-like Homeodomain-like 11
Adenine nucleotide alpha hydrolases-like PheT/TilS domain 11
Nitrite and sulphite reductase 4Fe-4S domain-like Nitrite and sulphite reductase 4Fe-4S domain-like 11
PurM N-terminal domain-like PurM N-terminal domain-like 11
Formate/glycerate dehydrogenase catalytic domain-like ACT-like 11
NAD(P)-binding Rossmann-fold domains Glutamyl tRNA-reductase dimerization domain 11
Methylglyoxal synthase-like Cytidine deaminase-like 11
Transcription factor NusA, N-terminal domain Rad51 N-terminal domain-like 11
Nucleic acid-binding proteins S-adenosyl-L-methionine-dependent methyltransferases 11
PHP domain-like AF1531-like 11
Sensory domain-like Nucleotide cyclase 11
Periplasmic binding protein-like II Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain 11
Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain 11
NHL repeat Calcium-dependent phosphotriesterase 11
Thioredoxin-like Rhodanese/Cell cycle control phosphatase 11
Methionyl-tRNA synthetase (MetRS), Zn-domain Nucleic acid-binding proteins 11
Carbon-nitrogen hydrolase Adenine nucleotide alpha hydrolases-like 11
HAMP domain-like PP2C-like 11
OMPA-like TSP type-3 repeat 11
Zn-dependent exopeptidases Transferrin receptor-like dimerisation domain 11
Calcium ATPase, transduction domain A HAD-like 11
Rho N-terminal domain-like Nucleic acid-binding proteins 11
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase DNA mismatch repair protein MutL 11
Cupredoxins Carboxypeptidase regulatory domain-like 11
Siroheme synthase middle domains-like Tetrapyrrole methylase 11
Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 Nucleic acid-binding proteins 11
PPK N-terminal domain-like Phospholipase D/nuclease 11
PIN domain-like P-loop containing nucleoside triphosphate hydrolases 11
Nucleotidylyl transferase tRNA-binding arm 11
Aconitase B, N-terminal domain Aconitase iron-sulfur domain 11
PurS-like FGAM synthase PurL, linker domain 11
Aspartate/glutamate racemase Aspartate/glutamate racemase 11
Galactose mutarotase-like (Trans)glycosidases 11
Thioredoxin-like HesB-like domain 11
PrpR receptor domain-like Homeodomain-like 11
DNA clamp DNA clamp 11
5' to 3' exonuclease, C-terminal subdomain DNA/RNA polymerases 11
P-loop containing nucleoside triphosphate hydrolases C-terminal UvrC-binding domain of UvrB 11
Heme-dependent catalase-like Class I glutamine amidotransferase-like 11
PIN domain-like Ribonuclease H-like 11
GIY-YIG endonuclease RuvA domain 2-like 11
Lysozyme-like Galactose mutarotase-like 11
Ribosomal protein S5 domain 2-like Nucleic acid-binding proteins 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) SIS domain 11
PIN domain-like DNA/RNA polymerases 11
Glutamyl tRNA-reductase catalytic, N-terminal domain Glutamyl tRNA-reductase dimerization domain 11
Carbamoyl phosphate synthetase, small subunit N-terminal domain Class I glutamine amidotransferase-like 11
PreATP-grasp domain Cyclophilin-like 11
YrdC/RibB RibA-like 11
Phoshotransferase/anion transport protein Phosphoenolpyruvate/pyruvate domain 11
Phoshotransferase/anion transport protein Phosphohistidine domain 11
Translation proteins Initiation factor IF2/eIF5b, domain 3 11
Carbamate kinase-like Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 11
Phoshotransferase/anion transport protein HPr-like 11
Succinyl-CoA synthetase domains Acyl-CoA N-acyltransferases (Nat) 11
Thioredoxin-like NHL repeat 11
HAD-like Ribosomal protein S5 domain 2-like 11
TGS-like Class II aaRS and biotin synthetases 11
DNA ligase/mRNA capping enzyme, catalytic domain RuvA domain 2-like 11
PK beta-barrel domain-like Phosphoenolpyruvate/pyruvate domain 11
Origin of replication-binding domain, RBD-like P-loop containing nucleoside triphosphate hydrolases 11
DNA repair protein MutS, domain I P-loop containing nucleoside triphosphate hydrolases 11
FKBP-like FKBP-like 11
Tex N-terminal region-like RuvA domain 2-like 11
NAD(P)-binding Rossmann-fold domains Glutathione synthetase ATP-binding domain-like 11
Thioesterase/thiol ester dehydrase-isomerase Thioesterase/thiol ester dehydrase-isomerase 11
Duplicated hybrid motif PGBD-like 11
Nucleotidyltransferase substrate binding subunit/domain Nucleotidyltransferase substrate binding subunit/domain 11
Prokaryotic type I DNA topoisomerase Zinc beta-ribbon 11
Adenine nucleotide alpha hydrolases-like Homodimeric domain of signal transducing histidine kinase 11
Actin-like ATPase domain HD-domain/PDEase-like 11
SGNH hydrolase Autotransporter 11
Methionyl-tRNA synthetase (MetRS), Zn-domain Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 11
PA domain Transferrin receptor-like dimerisation domain 11
ACP-like ACP-like 11
Tryptophan synthase beta subunit-like PLP-dependent enzymes CBS-domain pair 11
HPr-like Phosphoenolpyruvate/pyruvate domain 11
Trigger factor ribosome-binding domain Triger factor/SurA peptide-binding domain-like 11
Class II aaRS and biotin synthetases YbaK/ProRS associated domain 11
Ribonuclease PH domain 2-like Ribonuclease PH domain 2-like 11
"Winged helix" DNA-binding domain PLP-dependent transferases 11
Phage tail proteins Phage tail proteins 11
Thiamin diphosphate-binding fold (THDP-binding) Pyruvate-ferredoxin oxidoreductase, PFOR, domain III 11
TPR-like S-adenosyl-L-methionine-dependent methyltransferases 11
Carbamate kinase-like PUA domain-like 11
Adenine nucleotide alpha hydrolases-like GMP synthetase C-terminal dimerisation domain 11
HisI-like all-alpha NTP pyrophosphatases 11
PreATP-grasp domain PH0987 N-terminal domain-like 11
dsRNA-binding domain-like Ribosomal protein S5 domain 2-like 11
Glutathione synthetase ATP-binding domain-like Methylglyoxal synthase-like 11
NagB/RpiA/CoA transferase-like NagB/RpiA/CoA transferase-like 11
Nucleic acid-binding proteins Putative DNA-binding domain 11
Carbamate kinase-like NAD(P)-binding Rossmann-fold domains 11
FMN-linked oxidoreductases Nucleotide-binding domain 11
Nucleic acid-binding proteins GAD domain-like 11
Lysozyme-like beta-Roll 11
alpha/beta-Hydrolases beta-Roll 11
NagB/RpiA/CoA transferase-like D-ribose-5-phosphate isomerase (RpiA), lid domain 11
Nucleotide-binding domain FAD-linked reductases, C-terminal domain 11
gp5 N-terminal domain-like Phage fibre proteins 11
Methylesterase CheB, C-terminal domain S-adenosyl-L-methionine-dependent methyltransferases 11
Bacterial muramidases Lysozyme-like 11
Quinoprotein alcohol dehydrogenase-like CheY-like 11
P-loop containing nucleoside triphosphate hydrolases TGS-like 11
TPR-like UDP-Glycosyltransferase/glycogen phosphorylase 11
DsbC/DsbG N-terminal domain-like Thioredoxin-like 11
Nucleic acid-binding proteins Rad51 N-terminal domain-like 11
PPK N-terminal domain-like PHP14-like 11
N-terminal domain of DnaB helicase P-loop containing nucleoside triphosphate hydrolases 11
Thioredoxin-like Thioredoxin-like 11
NAD(P)-binding Rossmann-fold domains 1-deoxy-D-xylulose-5-phosphate reductoisomerase, C-terminal domain 11
Putative DNA-binding domain Anticodon-binding domain of PheRS 11
Zinc beta-ribbon DNA primase core 11
DNA topoisomerase I domain DNA breaking-rejoining enzymes 11
Cryptochrome/photolyase, N-terminal domain Cryptochrome/photolyase FAD-binding domain 11
Nitrite/Sulfite reductase N-terminal domain-like Nitrite/Sulfite reductase N-terminal domain-like 11
NHL repeat Nucleotide cyclase 11
FAD/NAD(P)-binding domain Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain 11
DNA primase core DNA primase DnaG, C-terminal domain 11
Histidine-containing phosphotransfer domain, HPT domain Histidine-containing phosphotransfer domain, HPT domain 11
Glycoside hydrolase/deacetylase TPR-like 11
Transcription factor NusA, N-terminal domain Prokaryotic type KH domain (KH-domain type II) 11
Translation initiation factor IF3, N-terminal domain Translation initiation factor IF3, C-terminal domain 11
ValRS/IleRS/LeuRS editing domain tRNA-binding arm 11
Tex N-terminal region-like Nucleic acid-binding proteins 11
Nucleotide-diphospho-sugar transferases RmlC-like cupins 11
Prokaryotic type KH domain (KH-domain type II) Ribosomal protein S3 C-terminal domain 11
Tex N-terminal region-like Ribonuclease H-like 11
Sensory domain-like CheY-like 11
Cyclophilin-like Single hybrid motif 11
HesB-like domain Rhodanese/Cell cycle control phosphatase 11
Nqo1 FMN-binding domain-like Nqo1 middle domain-like 11
cAMP-binding domain-like Nucleotide cyclase 11
Single hybrid motif FAD/NAD-linked reductases, dimerisation (C-terminal) domain 11
N-utilization substance G protein NusG, N-terminal domain Translation proteins SH3-like domain 11
FGAM synthase PurL, linker domain Class I glutamine amidotransferase-like 11
Protein kinase-like (PK-like) TPR-like 11
HD-domain/PDEase-like "Winged helix" DNA-binding domain 11
FAD-binding/transporter-associated domain-like Uridine diphospho-N-Acetylenolpyruvylglucosamine reductase, MurB, C-terminal domain 11
P-loop containing nucleoside triphosphate hydrolases ACT-like 11
PurS-like Class I glutamine amidotransferase-like 11
L9 N-domain-like Ribosomal protein L9 C-domain 11
FAD-linked reductases, C-terminal domain 4Fe-4S ferredoxins 11
Folate-binding domain Aminomethyltransferase beta-barrel domain 11
Transcription factor NusA, N-terminal domain Nucleic acid-binding proteins 11
PGBD-like L,D-transpeptidase catalytic domain-like 11
E set domains Six-hairpin glycosidases 11
"Winged helix" DNA-binding domain C-terminal domain of transcriptional repressors 11
PurM N-terminal domain-like Class I glutamine amidotransferase-like 11
P-loop containing nucleoside triphosphate hydrolases Smc hinge domain 11
"Winged helix" DNA-binding domain S-adenosyl-L-methionine-dependent methyltransferases 11
RNase III domain-like dsRNA-binding domain-like 11
DNA repair protein MutS, domain III P-loop containing nucleoside triphosphate hydrolases 11
Pili subunits GspK insert domain-like 11
Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases tRNA-binding arm 11
Positive stranded ssRNA viruses CalX-like 11
P-loop containing nucleoside triphosphate hydrolases RecA protein, C-terminal domain 11
Nucleic acid-binding proteins BRCT domain 11
Carbamate kinase-like Acyl-CoA N-acyltransferases (Nat) 11
Phosphoenolpyruvate/pyruvate domain PK C-terminal domain-like 11
Ribonuclease H-like HRDC-like 11
ThrRS/AlaRS common domain Class II aaRS ABD-related 11
Cyclophilin-like Cyclophilin-like 11
Ankyrin repeat Ankyrin repeat 11
MFS general substrate transporter Glycerol-3-phosphate (1)-acyltransferase 11
2Fe-2S ferredoxin-like alpha-helical ferredoxin 11
Tubulin nucleotide-binding domain-like Tubulin C-terminal domain-like 11
Class II aaRS and biotin synthetases GAD domain-like 11
P-loop containing nucleoside triphosphate hydrolases HRDC-like 11
Quinoprotein alcohol dehydrogenase-like Homodimeric domain of signal transducing histidine kinase 11
Translation proteins ThrRS/AlaRS common domain 11
RuvA domain 2-like DNA helicase RuvA subunit, C-terminal domain 11
Thiol:disulfide interchange protein DsbD, N-terminal domain (DsbD-alpha) Thiol:disulfide interchange protein DsbD, N-terminal domain (DsbD-alpha) 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) Alpha subunit of glutamate synthase, C-terminal domain 11
Nucleotidyltransferase Nucleotidyltransferase 11
Purple acid phosphatase, N-terminal domain Metallo-dependent phosphatases 11
Nucleotidyltransferase substrate binding subunit/domain ACT-like 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) FMN-linked oxidoreductases 11
Nucleotidyltransferase substrate binding subunit/domain HD-domain/PDEase-like 11
Concanavalin A-like lectins/glucanases Galactose-binding domain-like 11
ACT-like Formyltransferase 11
Metalloproteases ("zincins"), catalytic domain ARM repeat 11
Ribosomal protein S5 domain 2-like Eukaryotic type KH-domain (KH-domain type I) 11
Sensory domain-like PP2C-like 11
Pseudouridine synthase PUA domain-like 11
FAD/NAD(P)-binding domain 4Fe-4S ferredoxins 11
Methylated DNA-protein cysteine methyltransferase domain Methylated DNA-protein cysteine methyltransferase, C-terminal domain 11
Riboflavin synthase domain-like Riboflavin synthase domain-like 11
Aldolase 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain 11
Nucleotidylyl transferase Nucleic acid-binding proteins 11
Ribonuclease H-like DNA/RNA polymerases 11
P-loop containing nucleoside triphosphate hydrolases TRCF domain-like 11
Adenine nucleotide alpha hydrolases-like Argininosuccinate synthetase, C-terminal domain 11
Cytochrome c Cytochrome c 11
Galactose mutarotase-like Six-hairpin glycosidases 11
(Trans)glycosidases (Trans)glycosidases 11
Pectin lyase-like Autotransporter 11
Insert subdomain of RNA polymerase alpha subunit RBP11-like subunits of RNA polymerase 11
N-terminal domain of bifunctional PutA protein ALDH-like 11
PYP-like sensor domain (PAS domain) Histidine-containing phosphotransfer domain, HPT domain 11
DNA/RNA polymerases Lesion bypass DNA polymerase (Y-family), little finger domain 11
Nucleotidylyl transferase YegP-like 11
Quinoprotein alcohol dehydrogenase-like ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 11
P-loop containing nucleoside triphosphate hydrolases CarD-like 11
Adenine nucleotide alpha hydrolases-like DHS-like NAD/FAD-binding domain 11
Succinyl-CoA synthetase domains Succinyl-CoA synthetase domains 11
C-terminal effector domain of the bipartite response regulators DPP6 N-terminal domain-like 11
Galactose mutarotase-like Starch-binding domain-like 11
Class II aaRS and biotin synthetases C-terminal domain of transcriptional repressors 11
Putative DNA-binding domain Translation proteins 11
FMN-linked oxidoreductases Alpha subunit of glutamate synthase, C-terminal domain 11
Rhodanese/Cell cycle control phosphatase Rhodanese/Cell cycle control phosphatase 11
PreATP-grasp domain PreATP-grasp domain 11
NAD(P)-binding Rossmann-fold domains Siroheme synthase middle domains-like 11
Nucleic acid-binding proteins PheT/TilS domain 11
PUA domain-like alpha/beta knot 11
P-loop containing nucleoside triphosphate hydrolases Tropomyosin 11
N-terminal domain of MutM-like DNA repair proteins Glucocorticoid receptor-like (DNA-binding domain) 11
FMN-linked oxidoreductases FAD/NAD(P)-binding domain 11
Ribonuclease PH domain 2-like Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 11
YajQ-like YajQ-like 11
"Winged helix" DNA-binding domain NagB/RpiA/CoA transferase-like 11
Cupredoxins Cupredoxins 11
Glutathione synthetase ATP-binding domain-like Glutathione synthetase ATP-binding domain-like 11
Ribosomal protein S5 domain 2-like HSP90 C-terminal domain 11
Class I glutamine amidotransferase-like Adenine nucleotide alpha hydrolases-like 11
Class I glutamine amidotransferase-like Homeodomain-like 11
Starch-binding domain-like Galactose-binding domain-like 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) PRTase-like 11
PreATP-grasp domain Carbamoyl phosphate synthetase, large subunit connection domain 11
Sensory domain-like PYP-like sensor domain (PAS domain) 11
DNA repair protein MutS, domain II DNA repair protein MutS, domain III 11
Rudiment single hybrid motif PH0987 N-terminal domain-like 11
Galactose mutarotase-like Galactose-binding domain-like 11
Thioredoxin-like FAD/NAD(P)-binding domain 11
Phase 1 flagellin Phase 1 flagellin 11
Oligoxyloglucan reducing end-specific cellobiohydrolase Oligoxyloglucan reducing end-specific cellobiohydrolase 11
Translation proteins Ribosomal protein S5 domain 2-like 11
R1 subunit of ribonucleotide reductase, N-terminal domain PFL-like glycyl radical enzymes 11
Putative DNA-binding domain P-loop containing nucleoside triphosphate hydrolases 11
alpha/beta-Hydrolases S-adenosyl-L-methionine-dependent methyltransferases 11
GroEL-intermediate domain like GroEL apical domain-like 11
Ribonuclease PH domain 2-like Eukaryotic type KH-domain (KH-domain type I) 11
Barwin-like endoglucanases Sporulation related repeat 11
Insert subdomain of RNA polymerase alpha subunit C-terminal domain of RNA polymerase alpha subunit 11
Lysozyme-like Duplicated hybrid motif 11
ACT-like Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 11
NusB-like S-adenosyl-L-methionine-dependent methyltransferases 11
Hsp33 domain HSP33 redox switch-like 11
Flavoproteins YjgF-like 11
(Trans)glycosidases Carbohydrate-binding domain 11
Heme-dependent peroxidases Heme-dependent peroxidases 11
Methionine synthase domain Methionine synthase activation domain-like 11
TATA-box binding protein-like DNA-glycosylase 11
GIY-YIG endonuclease C-terminal UvrC-binding domain of UvrB 11
Adenine nucleotide alpha hydrolases-like ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 11
P-loop containing nucleoside triphosphate hydrolases Helical scaffold and wing domains of SecA 11
Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 11
Voltage-gated potassium channels NAD(P)-binding Rossmann-fold domains 11
GAF domain-like C-terminal effector domain of the bipartite response regulators 11
alpha-D-mannose-specific plant lectins alpha-D-mannose-specific plant lectins 11
6-phosphogluconate dehydrogenase C-terminal domain-like ACT-like 11
Dihydropteroate synthetase-like Methionine synthase activation domain-like 11
Ribosomal L11/L12e N-terminal domain Ribosomal protein L11, C-terminal domain 11
Methylesterase CheB, C-terminal domain Chemotaxis receptor methyltransferase CheR, N-terminal domain 11
AF1531-like Nucleic acid-binding proteins 11
Ribonuclease H-like Nucleic acid-binding proteins 11
EspE N-terminal domain-like Nucleotide-diphospho-sugar transferases 11
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase PP2C-like 11
Sporulation related repeat Sporulation related repeat 11
Galactose mutarotase-like E set domains 11
Chorismate mutase II ACT-like 11
(Trans)glycosidases Protein kinase-like (PK-like) 11
Phage tail proteins Phage fibre proteins 11
Methionine synthase domain Cobalamin (vitamin B12)-binding domain 11
Galactose mutarotase-like Glycosyl hydrolase domain 11
FGAM synthase PurL, linker domain PurM N-terminal domain-like 11
RBP11-like subunits of RNA polymerase C-terminal domain of RNA polymerase alpha subunit 11
Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) ThrRS/AlaRS common domain 11
Macro domain-like Zn-dependent exopeptidases 11
Ribosomal protein S5 domain 2-like DNA mismatch repair protein MutL 11
SGNH hydrolase RmlC-like cupins 11
N-terminal domain of bifunctional PutA protein FAD-linked oxidoreductase 11
FAD-linked oxidoreductase ALDH-like 11
ARM repeat ARM repeat 11
TGS-like ThrRS/AlaRS common domain 11

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