SUPERFAMILY 1.75 HMM library and genome assignments server

Domain combination pairs in Vibrio furnissii NCTC 11218

All pairs of domain combinations at the superfamily level are listed here.
The identification of domain pairs does not account for the possibility of non-contiguous domains. Inserted, or interlaced, domains are seen as having a simple pair ordering.

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Adjacent domain pairs graph

Graph of adjacent domain pairs.


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Domain combination pairs

792 domain combination pairs.
Click on a column heading to sort that column, or the 'View' button to see domain architetures for that domain pair combination.

Superfamily (N) Superfamily (C) Number of occurrances Number unique
"Winged helix" DNA-binding domain Periplasmic binding protein-like II 681
Homodimeric domain of signal transducing histidine kinase ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 3523
P-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases 3213
Homeodomain-like Homeodomain-like 307
CheY-like C-terminal effector domain of the bipartite response regulators 231
Actin-like ATPase domain Actin-like ATPase domain 205
Multidrug resistance efflux transporter EmrE Multidrug resistance efflux transporter EmrE 202
NAD(P)-binding Rossmann-fold domains 6-phosphogluconate dehydrogenase C-terminal domain-like 185
P-loop containing nucleoside triphosphate hydrolases Homeodomain-like 167
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase CheY-like 1513
Nucleotide cyclase EAL domain-like 157
Homodimeric domain of signal transducing histidine kinase CheY-like 1513
NAD(P)-binding Rossmann-fold domains Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 146
Homeodomain-like Tetracyclin repressor-like, C-terminal domain 141
PYP-like sensor domain (PAS domain) Nucleotide cyclase 1310
lambda repressor-like DNA-binding domains Periplasmic binding protein-like I 121
Formate dehydrogenase/DMSO reductase, domains 1-3 ADC-like 114
RmlC-like cupins Homeodomain-like 112
ABC transporter transmembrane region P-loop containing nucleoside triphosphate hydrolases 102
PYP-like sensor domain (PAS domain) ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 108
"Winged helix" DNA-binding domain Dimeric alpha+beta barrel 101
P-loop containing nucleoside triphosphate hydrolases MOP-like 101
Multidrug efflux transporter AcrB transmembrane domain Multidrug efflux transporter AcrB transmembrane domain 103
Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains 92
Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains Multidrug efflux transporter AcrB transmembrane domain 92
Regulatory protein AraC Homeodomain-like 92
Thioredoxin-like GST C-terminal domain-like 91
PYP-like sensor domain (PAS domain) PYP-like sensor domain (PAS domain) 96
PYP-like sensor domain (PAS domain) Homodimeric domain of signal transducing histidine kinase 97
Sigma2 domain of RNA polymerase sigma factors Sigma3 and sigma4 domains of RNA polymerase sigma factors 93
Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains 92
Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains Multidrug efflux transporter AcrB transmembrane domain 92
Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains 92
P-loop containing nucleoside triphosphate hydrolases Translation proteins 97
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase Histidine-containing phosphotransfer domain, HPT domain 87
CheY-like Homeodomain-like 82
Riboflavin synthase domain-like Ferredoxin reductase-like, C-terminal NADP-linked domain 87
CheY-like P-loop containing nucleoside triphosphate hydrolases 82
Zn-dependent exopeptidases Bacterial exopeptidase dimerisation domain 81
Thiolase-like Thiolase-like 81
Formate/glycerate dehydrogenase catalytic domain-like NAD(P)-binding Rossmann-fold domains 83
Homodimeric domain of signal transducing histidine kinase Histidine-containing phosphotransfer domain, HPT domain 87
Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) 84
"Winged helix" DNA-binding domain NagB/RpiA/CoA transferase-like 81
ACT-like ACT-like 75
Metallo-dependent hydrolases Composite domain of metallo-dependent hydrolases 74
PYP-like sensor domain (PAS domain) Methyl-accepting chemotaxis protein (MCP) signaling domain 73
PreATP-grasp domain Glutathione synthetase ATP-binding domain-like 73
"Winged helix" DNA-binding domain PLP-dependent transferases 62
Nucleotidylyl transferase Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 66
Nucleic acid-binding proteins Nucleic acid-binding proteins 64
P-loop containing nucleoside triphosphate hydrolases EF-G C-terminal domain-like 65
CheY-like Histidine-containing phosphotransfer domain, HPT domain 66
MurD-like peptide ligases, catalytic domain MurD-like peptide ligases, peptide-binding domain 63
FAD/NAD(P)-binding domain FAD-linked reductases, C-terminal domain 63
PLP-binding barrel Alanine racemase C-terminal domain-like 62
Sensory domain-like Methyl-accepting chemotaxis protein (MCP) signaling domain 62
PurM N-terminal domain-like PurM C-terminal domain-like 63
GroES-like NAD(P)-binding Rossmann-fold domains 62
Aminoacid dehydrogenase-like, N-terminal domain NAD(P)-binding Rossmann-fold domains 63
FAD/NAD(P)-binding domain FAD/NAD-linked reductases, dimerisation (C-terminal) domain 62
MetI-like MetI-like 62
Calcium ATPase, transduction domain A HAD-like 65
P-loop containing nucleoside triphosphate hydrolases Ribosomal protein S5 domain 2-like 65
"Winged helix" DNA-binding domain GntR ligand-binding domain-like 62
PYP-like sensor domain (PAS domain) EAL domain-like 55
PYP-like sensor domain (PAS domain) CheY-like 55
Phosphoglucomutase, first 3 domains Phosphoglucomutase, C-terminal domain 53
HAD-like Calcium ATPase, transmembrane domain M 54
(Trans)glycosidases Glycosyl hydrolase domain 54
E set domains (Trans)glycosidases 55
Phage tail proteins Phage tail proteins 54
Alpha-L RNA-binding motif Pseudouridine synthase 52
Sigma3 and sigma4 domains of RNA polymerase sigma factors Sigma3 and sigma4 domains of RNA polymerase sigma factors 52
Phosphoglucomutase, first 3 domains Phosphoglucomutase, first 3 domains 53
HlyD-like secretion proteins HlyD-like secretion proteins 52
HMA, heavy metal-associated domain HAD-like 54
gp5 N-terminal domain-like Phage fibre proteins 54
HAMP domain-like ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 55
HMA, heavy metal-associated domain Calcium ATPase, transduction domain A 54
Calcium ATPase, transduction domain A Calcium ATPase, transmembrane domain M 54
Thiamin diphosphate-binding fold (THDP-binding) TK C-terminal domain-like 53
HMA, heavy metal-associated domain Calcium ATPase, transmembrane domain M 54
P-loop containing nucleoside triphosphate hydrolases C-terminal domain of alpha and beta subunits of F1 ATP synthase 41
Sensory domain-like PYP-like sensor domain (PAS domain) 42
Nucleic acid-binding proteins Class II aaRS and biotin synthetases 43
"Winged helix" DNA-binding domain Chorismate lyase-like 41
N-terminal domain of alpha and beta subunits of F1 ATP synthase P-loop containing nucleoside triphosphate hydrolases 41
Sm-like ribonucleoproteins Mechanosensitive channel protein MscS (YggB), C-terminal domain 43
Phosphohistidine domain Phosphoenolpyruvate/pyruvate domain 44
OMPA-like OmpA-like 41
EF-G C-terminal domain-like EF-G C-terminal domain-like 43
Acyl-CoA dehydrogenase NM domain-like Acyl-CoA dehydrogenase C-terminal domain-like 42
Carbamate kinase-like ACT-like 43
Homeodomain-like SIS domain 41
PapD-like Periplasmic chaperone C-domain 42
CheW-like CheY-like 42
Homeodomain-like Probable bacterial effector-binding domain 41
HAMP domain-like Homodimeric domain of signal transducing histidine kinase 44
Sensory domain-like ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 44
Phage tail proteins Phage fibre proteins 43
Double Clp-N motif P-loop containing nucleoside triphosphate hydrolases 43
HD-domain/PDEase-like HD-domain/PDEase-like 42
Translation proteins EF-G C-terminal domain-like 43
Sensory domain-like Nucleotide cyclase 42
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase Ribosomal protein S5 domain 2-like 44
GAF domain-like Nucleotide cyclase 43
"Winged helix" DNA-binding domain GAF domain-like 41
2Fe-2S ferredoxin-like alpha-helical ferredoxin 43
P-loop containing nucleoside triphosphate hydrolases post-AAA+ oligomerization domain-like 42
cAMP-binding domain-like CBS-domain pair 41
PreATP-grasp domain Rudiment single hybrid motif 41
Phage tail proteins gp5 N-terminal domain-like 43
Glutathione synthetase ATP-binding domain-like Rudiment single hybrid motif 41
TrkA C-terminal domain-like TrkA C-terminal domain-like 42
alpha-helical ferredoxin Nucleotide-binding domain 44
N-terminal domain of alpha and beta subunits of F1 ATP synthase C-terminal domain of alpha and beta subunits of F1 ATP synthase 41
Periplasmic binding protein-like II Periplasmic binding protein-like II 33
Thiamin diphosphate-binding fold (THDP-binding) DHS-like NAD/FAD-binding domain 31
Nucleotidyltransferase ACT-like 32
Nucleotidyltransferase HD-domain/PDEase-like 32
Class II aaRS and biotin synthetases Class II aaRS ABD-related 33
Phospholipase D/nuclease Phospholipase D/nuclease 33
Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain 32
6-phosphogluconate dehydrogenase C-terminal domain-like 6-phosphogluconate dehydrogenase C-terminal domain-like 32
Periplasmic binding protein-like II Homodimeric domain of signal transducing histidine kinase 33
Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like 33
EF-G C-terminal domain-like Ribosomal protein S5 domain 2-like 32
E set domains Glycosyl hydrolase domain 33
Class I glutamine amidotransferase-like Homeodomain-like 31
Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain Phosphoenolpyruvate/pyruvate domain 33
RuvA domain 2-like Nucleic acid-binding proteins 33
TPR-like TPR-like 31
Mechanosensitive channel protein MscS (YggB), transmembrane region Mechanosensitive channel protein MscS (YggB), C-terminal domain 32
Periplasmic binding protein-like II ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 33
MgtE N-terminal domain-like MgtE membrane domain-like 31
P-loop containing nucleoside triphosphate hydrolases "Winged helix" DNA-binding domain 33
CoA-dependent acyltransferases CoA-dependent acyltransferases 33
FAD/NAD(P)-binding domain Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain 32
PYP-like sensor domain (PAS domain) Histidine-containing phosphotransfer domain, HPT domain 33
Nitrite/Sulfite reductase N-terminal domain-like Nitrite and sulphite reductase 4Fe-4S domain-like 33
2Fe-2S ferredoxin-like Riboflavin synthase domain-like 33
Nucleotide-diphospho-sugar transferases Trimeric LpxA-like enzymes 31
FAD/NAD(P)-binding domain Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain 32
Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex CoA-dependent acyltransferases 32
Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain Phosphohistidine domain 33
2Fe-2S ferredoxin-like Ferredoxin reductase-like, C-terminal NADP-linked domain 33
CBS-domain pair MgtE membrane domain-like 31
Sensory domain-like Sensory domain-like 31
MurCD N-terminal domain MurD-like peptide ligases, peptide-binding domain 31
MgtE N-terminal domain-like CBS-domain pair 31
Sensory domain-like Homodimeric domain of signal transducing histidine kinase 33
Phoshotransferase/anion transport protein PTS system IIB component-like 32
Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain 32
Translation proteins EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 32
MurCD N-terminal domain MurD-like peptide ligases, catalytic domain 31
FAD/NAD(P)-binding domain FAD/NAD(P)-binding domain 33
LuxS/MPP-like metallohydrolase LuxS/MPP-like metallohydrolase 32
Enolase N-terminal domain-like Enolase C-terminal domain-like 31
beta-N-acetylhexosaminidase-like domain (Trans)glycosidases 33
MalF N-terminal region-like MetI-like 32
Aldolase post-HMGL domain-like 33
P-loop containing nucleoside triphosphate hydrolases EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 32
HD-domain/PDEase-like ACT-like 32
Single hybrid motif CoA-dependent acyltransferases 32
Triger factor/SurA peptide-binding domain-like FKBP-like 33
EspE N-terminal domain-like P-loop containing nucleoside triphosphate hydrolases 33
Single hybrid motif Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex 32
Ribosomal protein S5 domain 2-like GHMP Kinase, C-terminal domain 31
Translation proteins SH3-like domain Nucleic acid-binding proteins 32
Metallo-dependent phosphatases 5'-nucleotidase (syn. UDP-sugar hydrolase), C-terminal domain 32
ValRS/IleRS/LeuRS editing domain Nucleotidylyl transferase 33
FliG FliG 31
Mechanosensitive channel protein MscS (YggB), transmembrane region Sm-like ribonucleoproteins 32
PDZ domain-like PDZ domain-like 22
Phosphoenolpyruvate/pyruvate domain PK C-terminal domain-like 21
GroEL-intermediate domain like GroEL apical domain-like 21
Glutamine synthetase, N-terminal domain Glutamine synthetase/guanido kinase 21
NAD(P)-binding Rossmann-fold domains TrkA C-terminal domain-like 22
(Trans)glycosidases Galactose-binding domain-like 22
Nicotinate/Quinolinate PRTase N-terminal domain-like Nicotinate/Quinolinate PRTase C-terminal domain-like 21
GreA transcript cleavage protein, N-terminal domain FKBP-like 21
Ribosomal protein S5 domain 2-like Type II DNA topoisomerase 22
Histidine-containing phosphotransfer domain, HPT domain CheW-like 21
Fe,Mn superoxide dismutase (SOD), N-terminal domain Fe,Mn superoxide dismutase (SOD), C-terminal domain 21
2Fe-2S ferredoxin-like Nucleotide-binding domain 22
GroEL equatorial domain-like GroEL-intermediate domain like 21
HAMP domain-like PYP-like sensor domain (PAS domain) 22
"Winged helix" DNA-binding domain Actin-like ATPase domain 21
DNA ligase/mRNA capping enzyme, catalytic domain Nucleic acid-binding proteins 22
Glucocorticoid receptor-like (DNA-binding domain) P-loop containing nucleoside triphosphate hydrolases 22
CheY-like Methylesterase CheB, C-terminal domain 21
Aconitase iron-sulfur domain LeuD/IlvD-like 22
Glutathione synthetase ATP-binding domain-like Succinyl-CoA synthetase domains 22
Actin-like ATPase domain Heat shock protein 70kD (HSP70), C-terminal subdomain 21
MoeA N-terminal region -like MoeA C-terminal domain-like 22
Translation proteins ThrRS/AlaRS common domain 22
ABC transporter involved in vitamin B12 uptake, BtuC ABC transporter involved in vitamin B12 uptake, BtuC 21
Lysozyme-like beta-lactamase/transpeptidase-like 22
Heat shock protein 70kD (HSP70), peptide-binding domain Heat shock protein 70kD (HSP70), C-terminal subdomain 21
TGS-like ACT-like 21
PK beta-barrel domain-like Phosphoenolpyruvate/pyruvate domain 21
Nucleotidyltransferase Nucleotidyltransferase substrate binding subunit/domain 22
Riboflavin synthase domain-like Riboflavin synthase domain-like 21
Molybdenum cofactor biosynthesis proteins MoeA C-terminal domain-like 22
FAD-binding/transporter-associated domain-like alpha-helical ferredoxin 21
CheY-like CheY-like 22
Homodimeric domain of signal transducing histidine kinase CheW-like 21
HMA, heavy metal-associated domain HMA, heavy metal-associated domain 22
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase Type II DNA topoisomerase 22
(Trans)glycosidases Chitinase insertion domain 22
E set domains Carbohydrate binding domain 22
GAF domain-like HD-domain/PDEase-like 22
MurE/MurF N-terminal domain MurD-like peptide ligases, catalytic domain 21
MurE/MurF N-terminal domain MurD-like peptide ligases, peptide-binding domain 21
Cytochrome c oxidase subunit II-like, transmembrane region Cupredoxins 22
"Winged helix" DNA-binding domain C-terminal domain of arginine repressor 21
Aldolase 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain 22
Phoshotransferase/anion transport protein HPr-like 22
cAMP-binding domain-like ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 22
ClpP/crotonase NAD(P)-binding Rossmann-fold domains 21
GAF domain-like EAL domain-like 21
FAD-binding/transporter-associated domain-like FAD-linked oxidases, C-terminal domain 21
MoeA N-terminal region -like Molybdenum cofactor biosynthesis proteins 22
Periplasmic binding protein-like II CheY-like 22
Carbamate kinase-like Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 22
ValRS/IleRS/LeuRS editing domain Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 22
IlvD/EDD N-terminal domain-like LeuD/IlvD-like 21
FAD/NAD(P)-binding domain Nitrite/Sulfite reductase N-terminal domain-like 22
Nucleotidylyl transferase Alpha-L RNA-binding motif 21
Nucleotidyltransferase TGS-like 21
Diaminopimelate epimerase-like Diaminopimelate epimerase-like 21
NAD(P)-binding Rossmann-fold domains Succinyl-CoA synthetase domains 22
Translation proteins Ribosomal protein S5 domain 2-like 21
HAMP domain-like Nucleotide cyclase 22
Zinc beta-ribbon Zinc beta-ribbon 22
Cytochrome c Cytochrome c 22
Rhodanese/Cell cycle control phosphatase Rhodanese/Cell cycle control phosphatase 22
Aspartate carbamoyltransferase, Regulatory-chain, N-terminal domain Aspartate carbamoyltransferase, Regulatory-chain, C-terminal domain 21
Nucleic acid-binding proteins P-loop containing nucleoside triphosphate hydrolases 22
Carbohydrate binding domain Chitinase insertion domain 22
CBS-domain pair FAD-binding/transporter-associated domain-like 21
beta-lactamase/transpeptidase-like Penicillin-binding protein associated domain 21
PK beta-barrel domain-like PK C-terminal domain-like 21
NAD(P)-binding Rossmann-fold domains LDH C-terminal domain-like 21
cAMP-binding domain-like "Winged helix" DNA-binding domain 21
P-loop containing nucleoside triphosphate hydrolases Restriction endonuclease-like 22
CheY-like Nucleotide cyclase 22
Thioredoxin-like Thioredoxin-like 22
Nucleotidyltransferase Poly A polymerase C-terminal region-like 22
ACT-like NAD(P)-binding Rossmann-fold domains 22
P-loop containing nucleoside triphosphate hydrolases Class I glutamine amidotransferase-like 22
N-terminal nucleophile aminohydrolases (Ntn hydrolases) FMN-linked oxidoreductases 21
ClpP/crotonase 6-phosphogluconate dehydrogenase C-terminal domain-like 21
Epsilon subunit of F1F0-ATP synthase N-terminal domain Epsilon subunit of F1F0-ATP synthase C-terminal domain 21
PLP-dependent transferases PLP-dependent transferases 22
N-terminal nucleophile aminohydrolases (Ntn hydrolases) Alpha subunit of glutamate synthase, C-terminal domain 21
Ribosomal protein S5 domain 2-like Ribonuclease PH domain 2-like 22
PIN domain-like 5' to 3' exonuclease, C-terminal subdomain 22
ClpP/crotonase ClpP/crotonase 22
Type II DNA topoisomerase GyrA/ParC C-terminal domain-like 21
tRNA-binding arm Class II aaRS and biotin synthetases 21
GroEL equatorial domain-like GroEL apical domain-like 21
Carbamate kinase-like NAD(P)-binding Rossmann-fold domains 22
EAL domain-like HD-domain/PDEase-like 21
PYP-like sensor domain (PAS domain) P-loop containing nucleoside triphosphate hydrolases 22
GAF domain-like P-loop containing nucleoside triphosphate hydrolases 22
FMN-linked oxidoreductases FAD/NAD(P)-binding domain 22
Trypsin-like serine proteases PDZ domain-like 22
H-NS histone-like proteins H-NS histone-like proteins 21
LysM domain LysM domain 22
Carbohydrate binding domain (Trans)glycosidases 22
NAD(P)-binding Rossmann-fold domains UDP-glucose/GDP-mannose dehydrogenase C-terminal domain 21
PilZ domain-like PilZ domain-like 21
Penicillin binding protein dimerisation domain beta-lactamase/transpeptidase-like 21
ACT-like P-loop containing nucleoside triphosphate hydrolases 22
Ribonuclease H-like DNA/RNA polymerases 22
Folate-binding domain Aminomethyltransferase beta-barrel domain 21
Class II aaRS and biotin synthetases ThrRS/AlaRS common domain 22
Chemotaxis receptor methyltransferase CheR, N-terminal domain S-adenosyl-L-methionine-dependent methyltransferases 21
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase CheW-like 21
FMN-linked oxidoreductases Alpha subunit of glutamate synthase, C-terminal domain 21
FAD-linked oxidases, C-terminal domain alpha-helical ferredoxin 21
Actin-like ATPase domain Heat shock protein 70kD (HSP70), peptide-binding domain 21
HD-domain/PDEase-like TGS-like 21
Actin-like ATPase domain HD-domain/PDEase-like 21
6-phosphogluconate dehydrogenase C-terminal domain-like UDP-glucose/GDP-mannose dehydrogenase C-terminal domain 21
Periplasmic binding protein-like II Lysozyme-like 22
PYP-like sensor domain (PAS domain) Homeodomain-like 22
FAD/NAD(P)-binding domain Nitrite and sulphite reductase 4Fe-4S domain-like 22
Periplasmic binding protein-like II Histidine-containing phosphotransfer domain, HPT domain 22
HAMP domain-like CheY-like 22
CBS-domain pair Inosine monophosphate dehydrogenase (IMPDH) 11
TGS-like Class II aaRS and biotin synthetases 11
Single hybrid motif Single hybrid motif 11
Prokaryotic type KH domain (KH-domain type II) Rad51 N-terminal domain-like 11
TrmE connector domain P-loop containing nucleoside triphosphate hydrolases 11
TPR-like C-terminal effector domain of the bipartite response regulators 11
Chaperone J-domain DnaJ/Hsp40 cysteine-rich domain 11
GAF domain-like Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain 11
Thiol:disulfide interchange protein DsbD, N-terminal domain (DsbD-alpha) Thioredoxin-like 11
Glutathione synthetase ATP-binding domain-like Phosphoenolpyruvate/pyruvate domain 11
Aconitase B, N-terminal domain Aconitase iron-sulfur domain 11
alpha-helical ferredoxin Formate dehydrogenase/DMSO reductase, domains 1-3 11
Trypsin-like serine proteases Sec-C motif 11
PDZ domain-like ClpP/crotonase 11
Homocysteine S-methyltransferase Methionine synthase activation domain-like 11
Tryptophan synthase beta subunit-like PLP-dependent enzymes ACT-like 11
Zinc beta-ribbon DNA primase DnaG, C-terminal domain 11
Carbohydrate-binding domain beta-N-acetylhexosaminidase-like domain 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) Adenine nucleotide alpha hydrolases-like 11
Cadherin-like vWA-like 11
Prokaryotic type KH domain (KH-domain type II) Prokaryotic type KH domain (KH-domain type II) 11
THUMP domain-like Adenine nucleotide alpha hydrolases-like 11
Homeodomain-like Ribonuclease H-like 11
LysM domain L,D-transpeptidase catalytic domain-like 11
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase DNA mismatch repair protein MutL 11
Macro domain-like Zn-dependent exopeptidases 11
2Fe-2S ferredoxin-like 4Fe-4S ferredoxins 11
Tubulin nucleotide-binding domain-like Tubulin C-terminal domain-like 11
Carbohydrate-binding domain E set domains 11
PEP carboxykinase N-terminal domain PEP carboxykinase-like 11
PreATP-grasp domain Methylglyoxal synthase-like 11
MOSC N-terminal domain-like Riboflavin synthase domain-like 11
Phage tail proteins PGBD-like 11
P-loop containing nucleoside triphosphate hydrolases Prokaryotic type KH domain (KH-domain type II) 11
Nucleotidylyl transferase tRNA-binding arm 11
Phage fibre proteins Lysozyme-like 11
Transmembrane di-heme cytochromes a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) 11
E set domains Six-hairpin glycosidases 11
Prokaryotic type I DNA topoisomerase Zinc beta-ribbon 11
FAD-binding/transporter-associated domain-like CO dehydrogenase flavoprotein C-terminal domain-like 11
Nucleotide-binding domain Nucleotide-binding domain 11
Acyl-CoA N-acyltransferases (Nat) Carbon-nitrogen hydrolase 11
Bacterial muramidases Lysozyme-like 11
DNA-glycosylase Nudix 11
PreATP-grasp domain Carbamoyl phosphate synthetase, large subunit connection domain 11
DNA methylase specificity domain DNA methylase specificity domain 11
HisI-like all-alpha NTP pyrophosphatases 11
PIN domain-like Ribonuclease H-like 11
HPr-like Phosphoenolpyruvate/pyruvate domain 11
TGS-like ThrRS/AlaRS common domain 11
Aspartate/glutamate racemase Aspartate/glutamate racemase 11
Flavoproteins Ferredoxin reductase-like, C-terminal NADP-linked domain 11
Nqo1 FMN-binding domain-like alpha-helical ferredoxin 11
S-adenosylmethionine synthetase S-adenosylmethionine synthetase 11
Glutamyl tRNA-reductase catalytic, N-terminal domain NAD(P)-binding Rossmann-fold domains 11
PTS system fructose IIA component-like Phosphoenolpyruvate/pyruvate domain 11
post-HMGL domain-like Single hybrid motif 11
GspK insert domain-like GspK insert domain-like 11
Periplasmic binding protein-like I PYP-like sensor domain (PAS domain) 11
P-loop containing nucleoside triphosphate hydrolases Molybdenum cofactor biosynthesis proteins 11
Insert subdomain of RNA polymerase alpha subunit RBP11-like subunits of RNA polymerase 11
UbiD C-terminal domain-like UbiD C-terminal domain-like 11
ISP domain Bet v1-like 11
P-loop containing nucleoside triphosphate hydrolases HRDC-like 11
Nucleotide-binding domain FAD/NAD(P)-binding domain 11
E set domains Chitinase insertion domain 11
Ada DNA repair protein, N-terminal domain (N-Ada 10) Homeodomain-like 11
Tex N-terminal region-like Nucleic acid-binding proteins 11
DNA repair protein MutS, domain II P-loop containing nucleoside triphosphate hydrolases 11
Aconitase B, N-terminal domain LeuD/IlvD-like 11
PGBD-like Lysozyme-like 11
Adenine nucleotide alpha hydrolases-like Argininosuccinate synthetase, C-terminal domain 11
Ribosomal protein S5 domain 2-like DNA mismatch repair protein MutL 11
HRDC-like HRDC-like 11
Tex N-terminal region-like RuvA domain 2-like 11
Ribosomal L11/L12e N-terminal domain Ribosomal protein L11, C-terminal domain 11
Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain Pyrimidine nucleoside phosphorylase C-terminal domain 11
Metalloproteases ("zincins"), catalytic domain PKD domain 11
CheY-like cAMP-binding domain-like 11
Composite domain of metallo-dependent hydrolases Composite domain of metallo-dependent hydrolases 11
Acetyl-CoA synthetase-like ACP-like 11
ClpP/crotonase NfeD domain-like 11
Succinyl-CoA synthetase domains Succinyl-CoA synthetase domains 11
YgfB-like Sec-C motif 11
Nucleic acid-binding proteins DNA helicase RuvA subunit, C-terminal domain 11
Calcium-dependent phosphotriesterase Homeodomain-like 11
Dihydropteroate synthetase-like Cobalamin (vitamin B12)-binding domain 11
DNA/RNA polymerases Lesion bypass DNA polymerase (Y-family), little finger domain 11
P-loop containing nucleoside triphosphate hydrolases Helical scaffold and wing domains of SecA 11
Nucleic acid-binding proteins ArfGap/RecO-like zinc finger 11
PIN domain-like P-loop containing nucleoside triphosphate hydrolases 11
Globin-like Riboflavin synthase domain-like 11
MOSC N-terminal domain-like Ferredoxin reductase-like, C-terminal NADP-linked domain 11
Class II aaRS and biotin synthetases C-terminal domain of transcriptional repressors 11
Transcription factor NusA, N-terminal domain Prokaryotic type KH domain (KH-domain type II) 11
Putative DNA-binding domain Anticodon-binding domain of PheRS 11
Ribosomal protein S5 domain 2-like HSP90 C-terminal domain 11
YjgF-like YjgF-like 11
PKD domain PKD domain 11
Ribosomal protein L7/12, oligomerisation (N-terminal) domain ClpS-like 11
Chorismate mutase II Periplasmic binding protein-like II 11
Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 11
N-terminal domain of bifunctional PutA protein ALDH-like 11
DNA repair protein MutS, domain I DNA repair protein MutS, domain II 11
cAMP-binding domain-like Homodimeric domain of signal transducing histidine kinase 11
TPR-like Nucleotide cyclase 11
Eukaryotic type KH-domain (KH-domain type I) Nucleic acid-binding proteins 11
Ribosomal protein L6 Ribosomal protein L6 11
Starch-binding domain-like E set domains 11
NAD(P)-binding Rossmann-fold domains Acyl-CoA N-acyltransferases (Nat) 11
Cytidine deaminase-like Cytidine deaminase-like 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) SIS domain 11
Nucleotide-binding domain ADC-like 11
Starch-binding domain-like Glycosyl hydrolase domain 11
TrkA C-terminal domain-like FAD-binding/transporter-associated domain-like 11
Nucleotidylyl transferase Riboflavin kinase-like 11
GAF domain-like Phosphoenolpyruvate/pyruvate domain 11
"Winged helix" DNA-binding domain Class II aaRS and biotin synthetases 11
DsbC/DsbG N-terminal domain-like Thioredoxin-like 11
Ribbon-helix-helix Replication modulator SeqA, C-terminal DNA-binding domain 11
"Winged helix" DNA-binding domain Acyl-CoA N-acyltransferases (Nat) 11
PPK N-terminal domain-like Phospholipase D/nuclease 11
PTS system IIB component-like PTS system IIB component-like 11
FAD-linked reductases, C-terminal domain 4Fe-4S ferredoxins 11
CoA-dependent acyltransferases ACP-like 11
Class II aaRS and biotin synthetases Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) 11
HCP-like Chaperone J-domain 11
P-loop containing nucleoside triphosphate hydrolases C-terminal effector domain of the bipartite response regulators 11
Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) Translation proteins 11
Glycoside hydrolase/deacetylase Families 57/38 glycoside transferase middle domain 11
GIY-YIG endonuclease C-terminal UvrC-binding domain of UvrB 11
L30e-like alpha/beta knot 11
RBP11-like subunits of RNA polymerase C-terminal domain of RNA polymerase alpha subunit 11
beta-Galactosidase/glucuronidase domain Galactose mutarotase-like 11
TSP type-3 repeat OmpA-like 11
Translation proteins Translation proteins 11
2Fe-2S ferredoxin-like Formate dehydrogenase/DMSO reductase, domains 1-3 11
4Fe-4S ferredoxins Formate dehydrogenase/DMSO reductase, domains 1-3 11
THUMP domain-like Rhodanese/Cell cycle control phosphatase 11
Hsp33 domain HSP33 redox switch-like 11
Siroheme synthase middle domains-like Tetrapyrrole methylase 11
DNA ligase/mRNA capping enzyme, catalytic domain RuvA domain 2-like 11
NAD(P)-binding Rossmann-fold domains 1-deoxy-D-xylulose-5-phosphate reductoisomerase, C-terminal domain 11
CorA soluble domain-like Magnesium transport protein CorA, transmembrane region 11
HAD-like Ribosomal protein S5 domain 2-like 11
PYP-like sensor domain (PAS domain) Sporulation response regulatory protein Spo0B 11
Nucleotidyltransferase substrate binding subunit/domain ACT-like 11
Cupredoxins Cytochrome c 11
P-loop containing nucleoside triphosphate hydrolases Acyl-CoA N-acyltransferases (Nat) 11
Carbamate kinase-like PUA domain-like 11
gp5 N-terminal domain-like PGBD-like 11
Cryptochrome/photolyase, N-terminal domain Cryptochrome/photolyase FAD-binding domain 11
lambda repressor-like DNA-binding domains RmlC-like cupins 11
Acetyl-CoA synthetase-like NAD(P)-binding Rossmann-fold domains 11
Phage fibre proteins PGBD-like 11
NAD(P)-binding Rossmann-fold domains NAD(P)-binding Rossmann-fold domains 11
Pre-protein crosslinking domain of SecA Helical scaffold and wing domains of SecA 11
Lysozyme-like LysM domain 11
HPr-like Phosphohistidine domain 11
lambda integrase-like, N-terminal domain DNA breaking-rejoining enzymes 11
Lamin A/C globular tail domain DNase I-like 11
P-loop containing nucleoside triphosphate hydrolases Isocitrate/Isopropylmalate dehydrogenase-like 11
Creatinase/prolidase N-terminal domain Creatinase/aminopeptidase 11
MFS general substrate transporter MFS general substrate transporter 11
P-loop containing nucleoside triphosphate hydrolases Initiation factor IF2/eIF5b, domain 3 11
ACT-like Formyltransferase 11
Nucleotidylyl transferase Nucleic acid-binding proteins 11
"Winged helix" DNA-binding domain MukF C-terminal domain-like 11
Chorismate mutase II 6-phosphogluconate dehydrogenase C-terminal domain-like 11
Ada DNA repair protein, N-terminal domain (N-Ada 10) DNA-glycosylase 11
PurS-like PurM N-terminal domain-like 11
Sensory domain-like Sporulation response regulatory protein Spo0B 11
Pili subunits GspK insert domain-like 11
Adenine nucleotide alpha hydrolases-like DHS-like NAD/FAD-binding domain 11
ACT-like Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 11
Dihydropteroate synthetase-like Methionine synthase activation domain-like 11
P-loop containing nucleoside triphosphate hydrolases CBS-domain pair 11
DNA repair protein MutS, domain I DNA repair protein MutS, domain III 11
PurS-like FGAM synthase PurL, linker domain 11
DNA clamp DNA clamp 11
CheY-like EAL domain-like 11
PheT/TilS domain Anticodon-binding domain of PheRS 11
Methylglyoxal synthase-like Cytidine deaminase-like 11
HSP40/DnaJ peptide-binding domain HSP40/DnaJ peptide-binding domain 11
PH0987 N-terminal domain-like Cyclophilin-like 11
Putative DNA-binding domain Translation proteins 11
Globin-like HD-domain/PDEase-like 11
beta-N-acetylhexosaminidase-like domain E set domains 11
Homocysteine S-methyltransferase Dihydropteroate synthetase-like 11
Glutathione synthetase ATP-binding domain-like Glutathione synthetase ATP-binding domain-like 11
P-loop containing nucleoside triphosphate hydrolases TGS-like 11
alpha-helical ferredoxin ADC-like 11
S-adenosyl-L-methionine-dependent methyltransferases S-adenosyl-L-methionine-dependent methyltransferases 11
Class I glutamine amidotransferase-like Adenine nucleotide alpha hydrolases-like 11
DnaJ/Hsp40 cysteine-rich domain HSP40/DnaJ peptide-binding domain 11
Pheromone-binding domain of LuxR-like quorum-sensing transcription factors C-terminal effector domain of the bipartite response regulators 11
Metalloproteases ("zincins"), catalytic domain Collagen-binding domain 11
TGS-like Class II aaRS ABD-related 11
TSP type-3 repeat TSP type-3 repeat 11
Glutathione synthetase ATP-binding domain-like Carbamoyl phosphate synthetase, large subunit connection domain 11
Ribonuclease PH domain 2-like Nucleic acid-binding proteins 11
vWA-like TPR-like 11
Zinc beta-ribbon DNA primase core 11
Glycerol-3-phosphate (1)-acyltransferase Acyl-CoA N-acyltransferases (Nat) 11
RuvA domain 2-like BRCT domain 11
Class II aaRS and biotin synthetases SufE/NifU 11
(Trans)glycosidases Class I glutamine amidotransferase-like 11
UROD/MetE-like UROD/MetE-like 11
Cation efflux protein transmembrane domain-like Cation efflux protein cytoplasmic domain-like 11
Tricorn protease domain 2 MetI-like 11
CO dehydrogenase ISP C-domain like CO dehydrogenase flavoprotein C-terminal domain-like 11
5' to 3' exonuclease, C-terminal subdomain Ribonuclease H-like 11
YajQ-like YajQ-like 11
Sensory domain-like CheY-like 11
NTF2-like Sec-C motif 11
Methylated DNA-protein cysteine methyltransferase domain Methylated DNA-protein cysteine methyltransferase, C-terminal domain 11
Formyltransferase FMT C-terminal domain-like 11
Starch-binding domain-like Starch-binding domain-like 11
CheY-like HD-domain/PDEase-like 11
Periplasmic binding protein-like II Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain 11
FAD/NAD-linked reductases, dimerisation (C-terminal) domain Rhodanese/Cell cycle control phosphatase 11
Insert subdomain of RNA polymerase alpha subunit C-terminal domain of RNA polymerase alpha subunit 11
Nucleotidyltransferase substrate binding subunit/domain Nucleotidyltransferase substrate binding subunit/domain 11
N-terminal domain of MutM-like DNA repair proteins S13-like H2TH domain 11
YjeF N-terminal domain-like Ribokinase-like 11
PreATP-grasp domain PreATP-grasp domain 11
Fic-like "Winged helix" DNA-binding domain 11
P-loop containing nucleoside triphosphate hydrolases CarD-like 11
PK beta-barrel domain-like Ferredoxin reductase-like, C-terminal NADP-linked domain 11
Calcium ATPase, transmembrane domain M SpoIIaa-like 11
FGAM synthase PurL, linker domain PurM C-terminal domain-like 11
Methionyl-tRNA synthetase (MetRS), Zn-domain Nucleotidylyl transferase 11
"Winged helix" DNA-binding domain S-adenosyl-L-methionine-dependent methyltransferases 11
Barwin-like endoglucanases Sporulation related repeat 11
NAD(P)-binding Rossmann-fold domains Siroheme synthase middle domains-like 11
Cupredoxins Cupredoxins 11
Periplasmic binding protein-like II PYP-like sensor domain (PAS domain) 11
Aldolase Single hybrid motif 11
Nucleotide-binding domain Formate dehydrogenase/DMSO reductase, domains 1-3 11
PKD domain Carbohydrate binding domain 11
PGBD-like L,D-transpeptidase catalytic domain-like 11
Pseudouridine synthase PUA domain-like 11
Translation proteins Initiation factor IF2/eIF5b, domain 3 11
Rad51 N-terminal domain-like Rad51 N-terminal domain-like 11
GroES-like GroES-like 11
PUA domain-like S-adenosyl-L-methionine-dependent methyltransferases 11
Ribonuclease PH domain 2-like Eukaryotic type KH-domain (KH-domain type I) 11
Ribonuclease H-like Nucleic acid-binding proteins 11
ACP-like NAD(P)-binding Rossmann-fold domains 11
P-loop containing nucleoside triphosphate hydrolases Pre-protein crosslinking domain of SecA 11
5' to 3' exonuclease, C-terminal subdomain DNA/RNA polymerases 11
Homeodomain-like TATA-box binding protein-like 11
NAD(P)-binding Rossmann-fold domains Glutathione synthetase ATP-binding domain-like 11
2Fe-2S ferredoxin-like FAD-binding/transporter-associated domain-like 11
C-terminal UvrC-binding domain of UvrB RuvA domain 2-like 11
Carbamoyl phosphate synthetase, large subunit connection domain Methylglyoxal synthase-like 11
Adenine nucleotide alpha hydrolases-like Adenine nucleotide alpha hydrolases-like 11
NusB-like S-adenosyl-L-methionine-dependent methyltransferases 11
ACT-like PYP-like sensor domain (PAS domain) 11
P-loop containing nucleoside triphosphate hydrolases PGBD-like 11
Thioesterase/thiol ester dehydrase-isomerase Thioesterase/thiol ester dehydrase-isomerase 11
Nucleic acid-binding proteins Anticodon-binding domain of PheRS 11
L-aspartase-like Acyl-CoA N-acyltransferases (Nat) 11
P-loop containing nucleoside triphosphate hydrolases TRCF domain-like 11
Methionine synthase domain Cobalamin (vitamin B12)-binding domain 11
CheY-like TPR-like 11
Nucleic acid-binding proteins GAD domain-like 11
Trigger factor ribosome-binding domain Triger factor/SurA peptide-binding domain-like 11
Trigger factor ribosome-binding domain FKBP-like 11
YhbC-like, N-terminal domain YhbC-like, C-terminal domain 11
PFL-like glycyl radical enzymes PFL-like glycyl radical enzymes 11
Class II aaRS and biotin synthetases Translation proteins 11
P-loop containing nucleoside triphosphate hydrolases MoeA C-terminal domain-like 11
NAD(P)-binding Rossmann-fold domains Tetrapyrrole methylase 11
Ribonuclease H-like RuvA domain 2-like 11
Periplasmic binding protein-like I Nucleotide cyclase 11
Domain of the SRP/SRP receptor G-proteins P-loop containing nucleoside triphosphate hydrolases 11
RuvA domain 2-like RuvA domain 2-like 11
"Winged helix" DNA-binding domain C-terminal domain of transcriptional repressors 11
Rho N-terminal domain-like P-loop containing nucleoside triphosphate hydrolases 11
Nucleic acid-binding proteins BRCT domain 11
DNA ligase/mRNA capping enzyme, catalytic domain BRCT domain 11
FimD N-terminal domain-like Sporulation related repeat 11
Obg GTP-binding protein N-terminal domain P-loop containing nucleoside triphosphate hydrolases 11
Families 57/38 glycoside transferase middle domain Galactose mutarotase-like 11
Homocysteine S-methyltransferase Methionine synthase domain 11
S-adenosyl-L-methionine-dependent methyltransferases Putative methyltransferase TM0872, insert domain 11
ParB/Sulfiredoxin KorB DNA-binding domain-like 11
Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain Nucleotidylyl transferase 11
P-loop containing nucleoside triphosphate hydrolases RecA protein, C-terminal domain 11
P-loop containing nucleoside triphosphate hydrolases MoeA N-terminal region -like 11
Pectin lyase-like SGNH hydrolase 11
PheT/TilS domain Putative DNA-binding domain 11
PUA domain-like alpha/beta knot 11
S13-like H2TH domain Glucocorticoid receptor-like (DNA-binding domain) 11
YbaK/ProRS associated domain Class II aaRS ABD-related 11
(Trans)glycosidases Type X cellulose binding domain, CBDX 11
Cytochrome c oxidase subunit II-like, transmembrane region Cytochrome c 11
DNA repair protein MutS, domain II DNA repair protein MutS, domain III 11
Nucleic acid-binding proteins S-adenosyl-L-methionine-dependent methyltransferases 11
P-loop containing nucleoside triphosphate hydrolases TPR-like 11
Protease propeptides/inhibitors Subtilisin-like 11
Acylphosphatase/BLUF domain-like YrdC/RibB 11
Isochorismatase-like hydrolases ACP-like 11
CoA-dependent acyltransferases Acetyl-CoA synthetase-like 11
L9 N-domain-like Ribosomal protein L9 C-domain 11
Thioredoxin-like FAD/NAD(P)-binding domain 11
PUA domain-like P-loop containing nucleoside triphosphate hydrolases 11
Homeodomain-like DNA-glycosylase 11
Phage tail proteins Lysozyme-like 11
Dihydropteroate synthetase-like Methionine synthase domain 11
Translation proteins "Winged helix" DNA-binding domain 11
PTS system fructose IIA component-like Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain 11
GAF domain-like Phosphohistidine domain 11
GAF domain-like Homeodomain-like 11
Sensory domain-like GAF domain-like 11
Cobalamin (vitamin B12)-binding domain Methionine synthase activation domain-like 11
post-HMGL domain-like 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain 11
vWA-like beta-Roll 11
Carbamoyl phosphate synthetase, small subunit N-terminal domain Class I glutamine amidotransferase-like 11
PTS system fructose IIA component-like Phosphohistidine domain 11
4Fe-4S ferredoxins ADC-like 11
Class I glutamine amidotransferase-like GMP synthetase C-terminal dimerisation domain 11
Zn-dependent exopeptidases LysM domain 11
PheT/TilS domain Class II aaRS and biotin synthetases 11
DeoB insert domain-like Alkaline phosphatase-like 11
Cadherin-like Cadherin-like 11
YrdC/RibB RibA-like 11
Adenine nucleotide alpha hydrolases-like PheT/TilS domain 11
Chitinase insertion domain PKD domain 11
FAD/NAD(P)-binding domain HI0933 insert domain-like 11
CheY-like CheC-like 11
P-loop containing nucleoside triphosphate hydrolases Zn-binding ribosomal proteins 11
R1 subunit of ribonucleotide reductase, N-terminal domain PFL-like glycyl radical enzymes 11
Galactose-binding domain-like beta-Galactosidase/glucuronidase domain 11
E set domains PKD domain 11
CarD-like TRCF domain-like 11
N-terminal domain of DnaB helicase P-loop containing nucleoside triphosphate hydrolases 11
FKBP-like FKBP-like 11
FabD/lysophospholipase-like Probable ACP-binding domain of malonyl-CoA ACP transacylase 11
Adenine nucleotide alpha hydrolases-like MesJ substrate recognition domain-like 11
HPr-like Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain 11
Flavoproteins Riboflavin synthase domain-like 11
Nucleic acid-binding proteins Rad51 N-terminal domain-like 11
Acyl-CoA N-acyltransferases (Nat) Thioesterase/thiol ester dehydrase-isomerase 11
Methionine synthase domain Methionine synthase activation domain-like 11
N-terminal domain of bifunctional PutA protein FAD-linked oxidoreductase 11
Nucleotidylyl transferase Ribosomal protein L25-like 11
TolB, N-terminal domain Tricorn protease N-terminal domain 11
PK beta-barrel domain-like 2Fe-2S ferredoxin-like 11
GAF domain-like ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 11
4Fe-4S ferredoxins Radical SAM enzymes 11
HprK N-terminal domain-like Isocitrate/Isopropylmalate dehydrogenase-like 11
Glutathione synthetase ATP-binding domain-like Methylglyoxal synthase-like 11
GIY-YIG endonuclease RuvA domain 2-like 11
Periplasmic binding protein-like II Nucleotide cyclase 11
MOSC N-terminal domain-like 2Fe-2S ferredoxin-like 11
Class II aaRS and biotin synthetases Anticodon-binding domain of PheRS 11
P-loop containing nucleoside triphosphate hydrolases Signal peptide-binding domain 11
PK beta-barrel domain-like Riboflavin synthase domain-like 11
Glycoside hydrolase/deacetylase Galactose mutarotase-like 11
2Fe-2S ferredoxin-like CO dehydrogenase flavoprotein C-terminal domain-like 11
2Fe-2S ferredoxin-like CO dehydrogenase ISP C-domain like 11
Periplasmic binding protein-like II GlnB-like 11
"Winged helix" DNA-binding domain Rhodanese/Cell cycle control phosphatase 11
Putative DNA-binding domain Class II aaRS and biotin synthetases 11
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase HSP90 C-terminal domain 11
Lysozyme-like Carbohydrate binding domain 11
HIT-like HIT-like 11
alpha-helical ferredoxin 4Fe-4S ferredoxins 11
Transcription factor NusA, N-terminal domain Nucleic acid-binding proteins 11
MesJ substrate recognition domain-like PheT/TilS domain 11
P-loop containing nucleoside triphosphate hydrolases C-terminal UvrC-binding domain of UvrB 11
Adenine nucleotide alpha hydrolases-like GMP synthetase C-terminal dimerisation domain 11
Globin-like Ferredoxin reductase-like, C-terminal NADP-linked domain 11
Succinyl-CoA synthetase domains Acyl-CoA N-acyltransferases (Nat) 11
RNase III domain-like dsRNA-binding domain-like 11
FAD/NAD(P)-binding domain Rhodanese/Cell cycle control phosphatase 11
Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases Nucleic acid-binding proteins 11
Elongation factor Ts (EF-Ts), dimerisation domain Elongation factor Ts (EF-Ts), dimerisation domain 11
Phoshotransferase/anion transport protein Phoshotransferase/anion transport protein 11
CO dehydrogenase ISP C-domain like FAD-binding/transporter-associated domain-like 11
Carbamate kinase-like Acyl-CoA N-acyltransferases (Nat) 11
E set domains E set domains 11
Homo-oligomeric flavin-containing Cys decarboxylases, HFCD CoaB-like 11
Ada DNA repair protein, N-terminal domain (N-Ada 10) TATA-box binding protein-like 11
Ribonuclease H-like HRDC-like 11
UBA-like Elongation factor Ts (EF-Ts), dimerisation domain 11
NAD(P)-binding Rossmann-fold domains Glutamyl tRNA-reductase dimerization domain 11
Chaperone J-domain HSP40/DnaJ peptide-binding domain 11
Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 1-deoxy-D-xylulose-5-phosphate reductoisomerase, C-terminal domain 11
Sporulation response regulatory protein Spo0B ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 11
Nucleotidyltransferase substrate binding subunit/domain HD-domain/PDEase-like 11
P-loop containing nucleoside triphosphate hydrolases HprK N-terminal domain-like 11
RuvA domain 2-like DNA helicase RuvA subunit, C-terminal domain 11
PurM C-terminal domain-like PurM C-terminal domain-like 11
FAD-linked oxidoreductase ALDH-like 11
gp5 N-terminal domain-like Lysozyme-like 11
E set domains alpha/beta-Hydrolases 11
PurM N-terminal domain-like Class I glutamine amidotransferase-like 11
Periplasmic binding protein-like I EAL domain-like 11
Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) ThrRS/AlaRS common domain 11
Ribosomal protein S5 domain 2-like Nucleic acid-binding proteins 11
N-terminal domain of MutM-like DNA repair proteins Glucocorticoid receptor-like (DNA-binding domain) 11
HesB-like domain Fe-S cluster assembly (FSCA) domain-like 11
MOSC N-terminal domain-like PK beta-barrel domain-like 11
Periplasmic binding protein-like II ACT-like 11
(Trans)glycosidases Galactose mutarotase-like 11
ThrRS/AlaRS common domain Class II aaRS ABD-related 11
Nqo5-like HydB/Nqo4-like 11
NAD-binding domain of HMG-CoA reductase Substrate-binding domain of HMG-CoA reductase 11
Tex N-terminal region-like Ribonuclease H-like 11
2,3-Bisphosphoglycerate-independent phosphoglycerate mutase, substrate-binding domain Alkaline phosphatase-like 11
alpha-helical ferredoxin alpha-helical ferredoxin 11
NagB/RpiA/CoA transferase-like NagB/RpiA/CoA transferase-like 11
Coiled-coil domain of nucleotide exchange factor GrpE Head domain of nucleotide exchange factor GrpE 11
ACT-like Homeodomain-like 11
DNA repair protein MutS, domain III P-loop containing nucleoside triphosphate hydrolases 11
Nitrite and sulphite reductase 4Fe-4S domain-like Nitrite and sulphite reductase 4Fe-4S domain-like 11
Homocysteine S-methyltransferase Cobalamin (vitamin B12)-binding domain 11
PA domain Zn-dependent exopeptidases 11
PYP-like sensor domain (PAS domain) C-terminal effector domain of the bipartite response regulators 11
Peptide methionine sulfoxide reductase Mss4-like 11
Nucleotidylyl transferase An anticodon-binding domain of class I aminoacyl-tRNA synthetases 11
Chaperone J-domain HSC20 (HSCB), C-terminal oligomerisation domain 11
CheC-like Surface presentation of antigens (SPOA) 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) PRTase-like 11
Class II aaRS and biotin synthetases YbaK/ProRS associated domain 11
Nucleic acid-binding proteins PheT/TilS domain 11
Transcription factor NusA, N-terminal domain Rad51 N-terminal domain-like 11
Class II aaRS and biotin synthetases GAD domain-like 11
beta-Galactosidase/glucuronidase domain (Trans)glycosidases 11
HAMP domain-like Histidine-containing phosphotransfer domain, HPT domain 11
FAD-binding/transporter-associated domain-like Uridine diphospho-N-Acetylenolpyruvylglucosamine reductase, MurB, C-terminal domain 11
Carbohydrate-binding domain (Trans)glycosidases 11
Nucleic acid-binding proteins Putative DNA-binding domain 11
Translation proteins PRC-barrel domain 11
Glutamyl tRNA-reductase catalytic, N-terminal domain Glutamyl tRNA-reductase dimerization domain 11
PIN domain-like DNA/RNA polymerases 11
(Trans)glycosidases PKD domain 11
FAD/NAD(P)-binding domain 4Fe-4S ferredoxins 11
dsRNA-binding domain-like Ribosomal protein S5 domain 2-like 11
Ribonuclease PH domain 2-like Ribonuclease PH domain 2-like 11
Six-hairpin glycosidases Six-hairpin glycosidases 11
FMN-binding split barrel UbiD C-terminal domain-like 11
Putative DNA-binding domain Initiation factor IF2/eIF5b, domain 3 11
Ribulose-phoshate binding barrel Ribulose-phoshate binding barrel 11
Outer membrane efflux proteins (OEP) HlyD-like secretion proteins 11
Galactose-binding domain-like Galactose mutarotase-like 11
Arabinanase/levansucrase/invertase Concanavalin A-like lectins/glucanases 11
all-alpha NTP pyrophosphatases all-alpha NTP pyrophosphatases 11
Nitrite/Sulfite reductase N-terminal domain-like Nitrite/Sulfite reductase N-terminal domain-like 11
DNA primase core DNA primase DnaG, C-terminal domain 11
Chorismate mutase II ACT-like 11
Chorismate mutase II NAD(P)-binding Rossmann-fold domains 11
PPK N-terminal domain-like PHP14-like 11
N-utilization substance G protein NusG, N-terminal domain Translation proteins SH3-like domain 11
NagB/RpiA/CoA transferase-like D-ribose-5-phosphate isomerase (RpiA), lid domain 11
Nucleotide-binding domain 4Fe-4S ferredoxins 11
Ribosomal protein S5 domain 2-like Eukaryotic type KH-domain (KH-domain type I) 11
DnaK suppressor protein DksA, alpha-hairpin domain Glucocorticoid receptor-like (DNA-binding domain) 11
Cytidine deaminase-like Dihydrofolate reductase-like 11
PurS-like PurM C-terminal domain-like 11
P-loop containing nucleoside triphosphate hydrolases TrpR-like 11
"Winged helix" DNA-binding domain "Winged helix" DNA-binding domain 11
"Winged helix" DNA-binding domain LexA/Signal peptidase 11
MFS general substrate transporter Glycerol-3-phosphate (1)-acyltransferase 11
beta-Galactosidase/glucuronidase domain beta-Galactosidase/glucuronidase domain 11
Hemerythrin-like Nucleotide cyclase 11
Formate/glycerate dehydrogenase catalytic domain-like ACT-like 11
Nucleic acid-binding proteins Prokaryotic type KH domain (KH-domain type II) 11
Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases tRNA-binding arm 11
Glutathione synthetase ATP-binding domain-like Acyl-CoA N-acyltransferases (Nat) 11
Adenine nucleotide alpha hydrolases-like Rhodanese/Cell cycle control phosphatase 11
Heme-dependent peroxidases Heme-dependent peroxidases 11
PUA domain-like Ribosomal protein S5 domain 2-like 11
Ribokinase-like Nucleotidylyl transferase 11
Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain Pyrimidine nucleoside phosphorylase C-terminal domain 11
FGAM synthase PurL, linker domain PurM N-terminal domain-like 11
TATA-box binding protein-like DNA-glycosylase 11
Putative DNA-binding domain P-loop containing nucleoside triphosphate hydrolases 11
Glutathione synthetase ATP-binding domain-like Phosphohistidine domain 11
FucI/AraA N-terminal and middle domains FucI/AraA C-terminal domain-like 11
PTS system fructose IIA component-like HPr-like 11
2Fe-2S ferredoxin-like ADC-like 11
FMN-linked oxidoreductases Nucleotide-binding domain 11
Starch-binding domain-like (Trans)glycosidases 11
Nudix Acid phosphatase/Vanadium-dependent haloperoxidase 11
Translation initiation factor IF3, N-terminal domain Translation initiation factor IF3, C-terminal domain 11
PHP14-like Phospholipase D/nuclease 11
CheY-like "Winged helix" DNA-binding domain 11
Prokaryotic type KH domain (KH-domain type II) Ribosomal protein S3 C-terminal domain 11
Sensory domain-like HD-domain/PDEase-like 11
Rho N-terminal domain-like Nucleic acid-binding proteins 11
ALDH-like Dehydroquinate synthase-like 11
PurM C-terminal domain-like Class I glutamine amidotransferase-like 11
CO dehydrogenase molybdoprotein N-domain-like Molybdenum cofactor-binding domain 11
Cadherin-like beta-Roll 11
Galactose mutarotase-like Six-hairpin glycosidases 11
DNA repair protein MutS, domain I P-loop containing nucleoside triphosphate hydrolases 11

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