SUPERFAMILY 1.75 HMM library and genome assignments server

Domain combination pairs in Ruegeria pomeroyi DSS-3

All pairs of domain combinations at the superfamily level are listed here.
The identification of domain pairs does not account for the possibility of non-contiguous domains. Inserted, or interlaced, domains are seen as having a simple pair ordering.

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Adjacent domain pairs graph

Graph of adjacent domain pairs.


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Domain combination pairs

649 domain combination pairs.
Click on a column heading to sort that column, or the 'View' button to see domain architetures for that domain pair combination.

Superfamily (N) Superfamily (C) Number of occurrances Number unique
"Winged helix" DNA-binding domain Periplasmic binding protein-like II 652
P-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases 3515
Multidrug resistance efflux transporter EmrE Multidrug resistance efflux transporter EmrE 343
FAD/NAD(P)-binding domain FAD-linked reductases, C-terminal domain 315
NAD(P)-binding Rossmann-fold domains 6-phosphogluconate dehydrogenase C-terminal domain-like 254
Homodimeric domain of signal transducing histidine kinase ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 2211
Thioredoxin-like GST C-terminal domain-like 212
Folate-binding domain Aminomethyltransferase beta-barrel domain 205
NAD(P)-binding Rossmann-fold domains Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 195
Acyl-CoA dehydrogenase NM domain-like Acyl-CoA dehydrogenase C-terminal domain-like 193
Composite domain of metallo-dependent hydrolases Metallo-dependent hydrolases 195
"Winged helix" DNA-binding domain Dimeric alpha+beta barrel 191
GroES-like NAD(P)-binding Rossmann-fold domains 193
Zn-dependent exopeptidases Bacterial exopeptidase dimerisation domain 171
Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) 177
Homeodomain-like Tetracyclin repressor-like, C-terminal domain 161
FAD/NAD(P)-binding domain Aminomethyltransferase beta-barrel domain 153
P-loop containing nucleoside triphosphate hydrolases MOP-like 151
"Winged helix" DNA-binding domain GntR ligand-binding domain-like 151
FAD/NAD(P)-binding domain Folate-binding domain 153
Homeodomain-like Homeodomain-like 144
Class I glutamine amidotransferase-like Homeodomain-like 123
Thiolase-like Thiolase-like 121
FAD-linked reductases, C-terminal domain Aminomethyltransferase beta-barrel domain 121
Actin-like ATPase domain Actin-like ATPase domain 124
FAD-linked reductases, C-terminal domain Folate-binding domain 121
CheY-like C-terminal effector domain of the bipartite response regulators 111
beta-Roll beta-Roll 1111
Cytochrome c Cytochrome c 114
PreATP-grasp domain Glutathione synthetase ATP-binding domain-like 115
ABC transporter transmembrane region P-loop containing nucleoside triphosphate hydrolases 94
Aminoacid dehydrogenase-like, N-terminal domain NAD(P)-binding Rossmann-fold domains 92
Enolase N-terminal domain-like Enolase C-terminal domain-like 91
"Winged helix" DNA-binding domain PLP-dependent transferases 91
Riboflavin synthase domain-like Ferredoxin reductase-like, C-terminal NADP-linked domain 95
Formate/glycerate dehydrogenase catalytic domain-like NAD(P)-binding Rossmann-fold domains 93
lambda repressor-like DNA-binding domains RmlC-like cupins 81
Homodimeric domain of signal transducing histidine kinase CheY-like 85
PYP-like sensor domain (PAS domain) Homodimeric domain of signal transducing histidine kinase 84
PreATP-grasp domain Rudiment single hybrid motif 83
FAD/NAD(P)-binding domain FAD/NAD(P)-binding domain 85
PYP-like sensor domain (PAS domain) ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 84
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase CheY-like 85
Glutathione synthetase ATP-binding domain-like Rudiment single hybrid motif 83
CO dehydrogenase molybdoprotein N-domain-like Molybdenum cofactor-binding domain 72
Riboflavin synthase domain-like 2Fe-2S ferredoxin-like 73
Ferredoxin reductase-like, C-terminal NADP-linked domain 2Fe-2S ferredoxin-like 73
Thiamin diphosphate-binding fold (THDP-binding) DHS-like NAD/FAD-binding domain 71
Sigma2 domain of RNA polymerase sigma factors Sigma3 and sigma4 domains of RNA polymerase sigma factors 72
Sm-like ribonucleoproteins Mechanosensitive channel protein MscS (YggB), C-terminal domain 73
FAD/NAD(P)-binding domain FAD/NAD-linked reductases, dimerisation (C-terminal) domain 73
Formate dehydrogenase/DMSO reductase, domains 1-3 ADC-like 72
cAMP-binding domain-like "Winged helix" DNA-binding domain 71
Thiamin diphosphate-binding fold (THDP-binding) TK C-terminal domain-like 75
P-loop containing nucleoside triphosphate hydrolases Translation proteins 65
FAD-binding/transporter-associated domain-like FAD-linked oxidases, C-terminal domain 62
"Winged helix" DNA-binding domain GAF domain-like 61
"Winged helix" DNA-binding domain Chorismate lyase-like 61
lambda repressor-like DNA-binding domains Periplasmic binding protein-like I 61
Mechanosensitive channel protein MscS (YggB), transmembrane region Sm-like ribonucleoproteins 62
Mechanosensitive channel protein MscS (YggB), transmembrane region Mechanosensitive channel protein MscS (YggB), C-terminal domain 62
Nucleotidylyl transferase Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 66
2Fe-2S ferredoxin-like CO dehydrogenase ISP C-domain like 63
Multidrug efflux transporter AcrB transmembrane domain Multidrug efflux transporter AcrB transmembrane domain 55
P-loop containing nucleoside triphosphate hydrolases EF-G C-terminal domain-like 55
MurD-like peptide ligases, catalytic domain MurD-like peptide ligases, peptide-binding domain 53
PYP-like sensor domain (PAS domain) CheY-like 52
P-loop containing nucleoside triphosphate hydrolases Ribosomal protein S5 domain 2-like 55
Creatinase/prolidase N-terminal domain Creatinase/aminopeptidase 52
Glutathione synthetase ATP-binding domain-like Succinyl-CoA synthetase domains 52
P-loop containing nucleoside triphosphate hydrolases Homeodomain-like 51
beta-Roll Hedgehog/intein (Hint) domain 55
CheY-like P-loop containing nucleoside triphosphate hydrolases 51
ISP domain Bet v1-like 52
FAD-binding/transporter-associated domain-like CO dehydrogenase flavoprotein C-terminal domain-like 52
PLP-binding barrel Alanine racemase C-terminal domain-like 53
NAD(P)-binding Rossmann-fold domains Succinyl-CoA synthetase domains 52
ClpP/crotonase ClpP/crotonase 51
Glutamine synthetase, N-terminal domain Glutamine synthetase/guanido kinase 51
Pheromone-binding domain of LuxR-like quorum-sensing transcription factors C-terminal effector domain of the bipartite response regulators 51
Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains Multidrug efflux transporter AcrB transmembrane domain 55
CheY-like Homeodomain-like 51
Cupredoxins Cupredoxins 52
EF-G C-terminal domain-like EF-G C-terminal domain-like 44
6-phosphogluconate dehydrogenase C-terminal domain-like 6-phosphogluconate dehydrogenase C-terminal domain-like 41
Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains 44
ClpP/crotonase 6-phosphogluconate dehydrogenase C-terminal domain-like 41
Nucleic acid-binding proteins Nucleic acid-binding proteins 44
MetI-like MetI-like 43
GroES-like GroES-like 41
ACT-like ACT-like 44
Triger factor/SurA peptide-binding domain-like FKBP-like 43
IlvD/EDD N-terminal domain-like LeuD/IlvD-like 41
Aspartate/glutamate racemase Aspartate/glutamate racemase 42
PreATP-grasp domain Single hybrid motif 42
Glutathione synthetase ATP-binding domain-like Single hybrid motif 42
Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains Multidrug efflux transporter AcrB transmembrane domain 44
Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains 44
ClpP/crotonase NAD(P)-binding Rossmann-fold domains 41
PDZ domain-like PDZ domain-like 42
FMN-linked oxidoreductases FAD/NAD(P)-binding domain 43
2Fe-2S ferredoxin-like 4Fe-4S ferredoxins 43
Rudiment single hybrid motif Single hybrid motif 42
Translation proteins EF-G C-terminal domain-like 33
Calcium ATPase, transduction domain A Calcium ATPase, transmembrane domain M 33
Lysozyme-like PGBD-like 32
Nucleotidylyl transferase An anticodon-binding domain of class I aminoacyl-tRNA synthetases 31
Sensory domain-like Homodimeric domain of signal transducing histidine kinase 32
Succinyl-CoA synthetase domains Succinyl-CoA synthetase domains 31
Nqo1 FMN-binding domain-like Nqo1 middle domain-like 32
Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains 33
TrkA C-terminal domain-like TrkA C-terminal domain-like 32
Calcium ATPase, transduction domain A HAD-like 33
P-loop containing nucleoside triphosphate hydrolases Class I glutamine amidotransferase-like 31
Homeodomain-like SIS domain 31
ValRS/IleRS/LeuRS editing domain Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 33
Calcium ATPase, transmembrane domain M HAD-like 33
Thioesterase/thiol ester dehydrase-isomerase Thioesterase/thiol ester dehydrase-isomerase 31
Nqo1 FMN-binding domain-like Nqo1C-terminal domain-like 32
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase Ribosomal protein S5 domain 2-like 33
Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like 32
2Fe-2S ferredoxin-like Formate dehydrogenase/DMSO reductase, domains 1-3 32
P-loop containing nucleoside triphosphate hydrolases "Winged helix" DNA-binding domain 33
Class II aaRS and biotin synthetases Class II aaRS ABD-related 33
Methylated DNA-protein cysteine methyltransferase domain Methylated DNA-protein cysteine methyltransferase, C-terminal domain 33
NAD(P)-binding Rossmann-fold domains Glutathione synthetase ATP-binding domain-like 31
Metallo-dependent phosphatases 5'-nucleotidase (syn. UDP-sugar hydrolase), C-terminal domain 33
Trypsin-like serine proteases PDZ domain-like 31
PurM N-terminal domain-like PurM C-terminal domain-like 33
NAD(P)-binding Rossmann-fold domains NAD(P)-binding Rossmann-fold domains 33
Nqo1 middle domain-like Nqo1C-terminal domain-like 32
Alpha-L RNA-binding motif Pseudouridine synthase 32
Lysozyme-like beta-lactamase/transpeptidase-like 33
ValRS/IleRS/LeuRS editing domain Nucleotidylyl transferase 33
4Fe-4S ferredoxins Formate dehydrogenase/DMSO reductase, domains 1-3 32
FAD/NAD(P)-binding domain Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain 32
LuxS/MPP-like metallohydrolase LuxS/MPP-like metallohydrolase 31
Sensory domain-like ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 32
Nucleic acid-binding proteins RuvA domain 2-like 33
Phosphoglucomutase, first 3 domains Phosphoglucomutase, C-terminal domain 21
Ribosomal protein S5 domain 2-like Type II DNA topoisomerase 22
Phosphohistidine domain Phosphoenolpyruvate/pyruvate domain 22
NAD(P)-binding Rossmann-fold domains Isocitrate/Isopropylmalate dehydrogenase-like 21
HMA, heavy metal-associated domain Calcium ATPase, transduction domain A 22
Phosphoglucomutase, first 3 domains Phosphoglucomutase, first 3 domains 21
MurCD N-terminal domain MurD-like peptide ligases, peptide-binding domain 21
HMA, heavy metal-associated domain Calcium ATPase, transmembrane domain M 22
P-loop containing nucleoside triphosphate hydrolases Restriction endonuclease-like 21
Single hybrid motif CoA-dependent acyltransferases 22
EF-G C-terminal domain-like Ribosomal protein S5 domain 2-like 22
4Fe-4S ferredoxins Ferredoxin reductase-like, C-terminal NADP-linked domain 22
FAD/NAD(P)-binding domain HI0933 insert domain-like 21
Single hybrid motif Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex 22
Thiamin diphosphate-binding fold (THDP-binding) Pyruvate-ferredoxin oxidoreductase, PFOR, domain III 22
CBS-domain pair FAD-binding/transporter-associated domain-like 21
MoeA N-terminal region -like MoeA C-terminal domain-like 21
Type II DNA topoisomerase GyrA/ParC C-terminal domain-like 22
N-terminal domain of alpha and beta subunits of F1 ATP synthase P-loop containing nucleoside triphosphate hydrolases 21
Thioredoxin-like Nqo1C-terminal domain-like 21
Translation proteins EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 21
Aldolase 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain 21
Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex CoA-dependent acyltransferases 22
P-loop containing nucleoside triphosphate hydrolases cAMP-binding domain-like 22
Molybdenum cofactor biosynthesis proteins MoeA C-terminal domain-like 21
P-loop containing nucleoside triphosphate hydrolases EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 21
P-loop containing nucleoside triphosphate hydrolases C-terminal domain of alpha and beta subunits of F1 ATP synthase 21
Ribosomal protein S5 domain 2-like Ribonuclease PH domain 2-like 22
Nucleic acid-binding proteins Class II aaRS and biotin synthetases 22
"Winged helix" DNA-binding domain "Winged helix" DNA-binding domain 21
Nucleotidyltransferase ACT-like 22
alpha-helical ferredoxin Nucleotide-binding domain 21
Nucleotidyltransferase Poly A polymerase C-terminal region-like 22
HAMP domain-like Homodimeric domain of signal transducing histidine kinase 22
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase Type II DNA topoisomerase 22
4Fe-4S ferredoxins Riboflavin synthase domain-like 22
DNA/RNA polymerases Lesion bypass DNA polymerase (Y-family), little finger domain 21
FAD/NAD(P)-binding domain Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain 21
TPR-like TPR-like 22
PUA domain-like P-loop containing nucleoside triphosphate hydrolases 22
Homeodomain-like Methylated DNA-protein cysteine methyltransferase domain 22
CoA-transferase family III (CaiB/BaiF) CoA-transferase family III (CaiB/BaiF) 21
Nucleic acid-binding proteins P-loop containing nucleoside triphosphate hydrolases 22
HMA, heavy metal-associated domain HAD-like 22
Nucleotidyltransferase Nucleotidyltransferase substrate binding subunit/domain 22
MoeA N-terminal region -like Molybdenum cofactor biosynthesis proteins 21
Macro domain-like Zn-dependent exopeptidases 21
LysM domain Periplasmic binding protein-like II 21
CheY-like CheY-like 22
MurE/MurF N-terminal domain MurD-like peptide ligases, catalytic domain 21
NAD(P)-binding Rossmann-fold domains ACT-like 22
4Fe-4S ferredoxins ADC-like 21
Homeodomain-like Methylated DNA-protein cysteine methyltransferase, C-terminal domain 22
Thioredoxin-like Nqo1 FMN-binding domain-like 21
HAMP domain-like ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 22
P-loop containing nucleoside triphosphate hydrolases Pre-protein crosslinking domain of SecA 22
MurE/MurF N-terminal domain MurD-like peptide ligases, peptide-binding domain 21
Translation proteins ThrRS/AlaRS common domain 22
Cytochrome c C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase 21
P-loop containing nucleoside triphosphate hydrolases Hypothetical protein YjiA, C-terminal domain 21
Formyltransferase FMT C-terminal domain-like 22
Composite domain of metallo-dependent hydrolases Composite domain of metallo-dependent hydrolases 22
Penicillin binding protein dimerisation domain beta-lactamase/transpeptidase-like 22
Double Clp-N motif P-loop containing nucleoside triphosphate hydrolases 22
Nucleic acid-binding proteins NAD(P)-binding Rossmann-fold domains 21
NTF2-like Nucleotide cyclase 21
2Fe-2S ferredoxin-like ADC-like 21
"Winged helix" DNA-binding domain NagB/RpiA/CoA transferase-like 21
P-loop containing nucleoside triphosphate hydrolases Glucocorticoid receptor-like (DNA-binding domain) 22
Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain 21
ABC transporter transmembrane region cAMP-binding domain-like 22
FabD/lysophospholipase-like Probable ACP-binding domain of malonyl-CoA ACP transacylase 22
Nitrite/Sulfite reductase N-terminal domain-like Nitrite and sulphite reductase 4Fe-4S domain-like 22
MurCD N-terminal domain MurD-like peptide ligases, catalytic domain 21
Aminoacid dehydrogenase-like, N-terminal domain Isocitrate/Isopropylmalate dehydrogenase-like 21
P-loop containing nucleoside triphosphate hydrolases post-AAA+ oligomerization domain-like 22
PYP-like sensor domain (PAS domain) C-terminal effector domain of the bipartite response regulators 21
Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain 22
Thioredoxin-like Nqo1 middle domain-like 21
Cobalamin (vitamin B12)-dependent enzymes Cobalamin (vitamin B12)-binding domain 21
Translation proteins SH3-like domain Nucleic acid-binding proteins 22
Class II aaRS and biotin synthetases ThrRS/AlaRS common domain 22
Nicotinate/Quinolinate PRTase N-terminal domain-like Nicotinate/Quinolinate PRTase C-terminal domain-like 21
NTF2-like NTF2-like 21
N-terminal domain of alpha and beta subunits of F1 ATP synthase C-terminal domain of alpha and beta subunits of F1 ATP synthase 21
tRNA-binding arm Class II aaRS and biotin synthetases 21
Thiolase-like ACP-like 11
Formate/glycerate dehydrogenase catalytic domain-like Serine metabolism enzymes domain 11
dUTPase-like dUTPase-like 11
Ribonuclease PH domain 2-like Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 11
Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) ThrRS/AlaRS common domain 11
Trigger factor ribosome-binding domain Triger factor/SurA peptide-binding domain-like 11
Eukaryotic type KH-domain (KH-domain type I) Nucleic acid-binding proteins 11
2Fe-2S ferredoxin-like Actin-like ATPase domain 11
Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain 11
Translation proteins PRC-barrel domain 11
Nucleotidylyl transferase Riboflavin kinase-like 11
ALDH-like ALDH-like 11
DNA clamp DNA clamp 11
P-loop containing nucleoside triphosphate hydrolases Helical scaffold and wing domains of SecA 11
Nitrous oxide reductase, N-terminal domain Cupredoxins 11
L9 N-domain-like Ribosomal protein L9 C-domain 11
GAF domain-like HlyD-like secretion proteins 11
Cation efflux protein transmembrane domain-like Cation efflux protein cytoplasmic domain-like 11
FMT C-terminal domain-like Bacterial luciferase-like 11
CarD-like TRCF domain-like 11
Ada DNA repair protein, N-terminal domain (N-Ada 10) Homeodomain-like 11
NAD-binding domain of HMG-CoA reductase Substrate-binding domain of HMG-CoA reductase 11
HD-domain/PDEase-like HD-domain/PDEase-like 11
Ada DNA repair protein, N-terminal domain (N-Ada 10) Methylated DNA-protein cysteine methyltransferase domain 11
Nucleotidyltransferase TGS-like 11
Folate-binding domain P-loop containing nucleoside triphosphate hydrolases 11
beta-Roll vWA-like 11
PreATP-grasp domain Aldolase 11
FMN-linked oxidoreductases Nucleotide-binding domain 11
Dihydropteroate synthetase-like Nitrite and sulphite reductase 4Fe-4S domain-like 11
FAD/NAD(P)-binding domain PurM N-terminal domain-like 11
Sigma3 and sigma4 domains of RNA polymerase sigma factors Sigma3 and sigma4 domains of RNA polymerase sigma factors 11
YhbC-like, N-terminal domain YhbC-like, C-terminal domain 11
2Fe-2S ferredoxin-like CO dehydrogenase molybdoprotein N-domain-like 11
GIY-YIG endonuclease RuvA domain 2-like 11
HRDC-like HRDC-like 11
HAMP domain-like Nucleotide cyclase 11
N-terminal domain of MutM-like DNA repair proteins S13-like H2TH domain 11
PLP-dependent transferases PLP-dependent transferases 11
NAD(P)-binding Rossmann-fold domains TrkA C-terminal domain-like 11
TrmE connector domain P-loop containing nucleoside triphosphate hydrolases 11
Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 Nucleic acid-binding proteins 11
Protein kinase-like (PK-like) Duplicated hybrid motif 11
Ribonuclease H-like DNA/RNA polymerases 11
Transmembrane di-heme cytochromes a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) 11
Periplasmic binding protein-like II OmpA-like 11
Ribosomal protein L7/12, oligomerisation (N-terminal) domain ClpS-like 11
PEP carboxykinase N-terminal domain PEP carboxykinase-like 11
Ribosomal protein S5 domain 2-like Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 11
TGS-like Class II aaRS ABD-related 11
DNA ligase/mRNA capping enzyme, catalytic domain Nucleic acid-binding proteins 11
PreATP-grasp domain PreATP-grasp domain 11
Translation initiation factor IF3, N-terminal domain Translation initiation factor IF3, C-terminal domain 11
Nucleic acid-binding proteins BRCT domain 11
Thiolase-like FabD/lysophospholipase-like 11
Duplicated hybrid motif PLP-dependent transferases 11
DNA repair protein MutS, domain II DNA repair protein MutS, domain III 11
ThrRS/AlaRS common domain Class II aaRS ABD-related 11
Nucleic acid-binding proteins GAD domain-like 11
Putative DNA-binding domain Anticodon-binding domain of PheRS 11
HD-domain/PDEase-like Nucleotidyltransferase 11
GAF domain-like Phosphoenolpyruvate/pyruvate domain 11
Methionyl-tRNA synthetase (MetRS), Zn-domain Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 11
Nucleic acid-binding proteins PheT/TilS domain 11
PK beta-barrel domain-like PK C-terminal domain-like 11
N-utilization substance G protein NusG, N-terminal domain Translation proteins SH3-like domain 11
Periplasmic binding protein-like II Voltage-gated potassium channels 11
Transcription factor NusA, N-terminal domain Prokaryotic type KH domain (KH-domain type II) 11
cAMP-binding domain-like Nucleotidyltransferase 11
Methionine synthase domain Cobalamin (vitamin B12)-binding domain 11
2Fe-2S ferredoxin-like alpha-helical ferredoxin 11
beta-lactamase/transpeptidase-like beta-Roll 11
Single hybrid motif TK C-terminal domain-like 11
Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain Pyrimidine nucleoside phosphorylase C-terminal domain 11
CO dehydrogenase ISP C-domain like CO dehydrogenase flavoprotein C-terminal domain-like 11
UBA-like Elongation factor Ts (EF-Ts), dimerisation domain 11
Formyltransferase Acetyl-CoA synthetase-like 11
YlxR-like L30e-like 11
Nucleic acid-binding proteins Putative DNA-binding domain 11
TerB-like Chaperone J-domain 11
S13-like H2TH domain Glucocorticoid receptor-like (DNA-binding domain) 11
S-adenosylmethionine synthetase S-adenosylmethionine synthetase 11
Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 Eukaryotic type KH-domain (KH-domain type I) 11
Nucleotide-diphospho-sugar transferases Trimeric LpxA-like enzymes 11
Probable ACP-binding domain of malonyl-CoA ACP transacylase NAD(P)-binding Rossmann-fold domains 11
PreATP-grasp domain Methylglyoxal synthase-like 11
PurM C-terminal domain-like PurM C-terminal domain-like 11
Metallo-hydrolase/oxidoreductase SCP-like 11
Glutathione synthetase ATP-binding domain-like post-HMGL domain-like 11
Class II aaRS and biotin synthetases Translation proteins 11
TPR-like P-loop containing nucleoside triphosphate hydrolases 11
CBS-domain pair MgtE membrane domain-like 11
Tryptophan synthase beta subunit-like PLP-dependent enzymes ACT-like 11
Transmembrane di-heme cytochromes YceI-like 11
SAM/Pointed domain Nucleotide cyclase 11
PGBD-like Trypsin-like serine proteases 11
Galactose mutarotase-like E set domains 11
Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases tRNA-binding arm 11
PIN domain-like DNA/RNA polymerases 11
Molybdenum cofactor-binding domain Molybdenum cofactor-binding domain 11
Hypothetical protein SAV1430 Fe-S cluster assembly (FSCA) domain-like 11
Nucleotide cyclase alpha/beta-Hydrolases 11
DnaJ/Hsp40 cysteine-rich domain HSP40/DnaJ peptide-binding domain 11
Probable ACP-binding domain of malonyl-CoA ACP transacylase alpha/beta-Hydrolases 11
Nucleotide-diphospho-sugar transferases IpsF-like 11
Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 11
Prokaryotic type KH domain (KH-domain type II) Ribosomal protein S3 C-terminal domain 11
Class II aaRS and biotin synthetases GAD domain-like 11
Protein kinase-like (PK-like) PLP-dependent transferases 11
Cytidine deaminase-like Dihydrofolate reductase-like 11
beta-lactamase/transpeptidase-like Penicillin-binding protein associated domain 11
Nucleotidylyl transferase P-loop containing nucleoside triphosphate hydrolases 11
PIN domain-like 5' to 3' exonuclease, C-terminal subdomain 11
2,3-Bisphosphoglycerate-independent phosphoglycerate mutase, substrate-binding domain Alkaline phosphatase-like 11
Ribonuclease PH domain 2-like Eukaryotic type KH-domain (KH-domain type I) 11
RuvA domain 2-like BRCT domain 11
Phosphoenolpyruvate/pyruvate domain PK C-terminal domain-like 11
Cytochrome c oxidase subunit II-like, transmembrane region Cupredoxins 11
Obg GTP-binding protein N-terminal domain P-loop containing nucleoside triphosphate hydrolases 11
ACP-like alpha/beta-Hydrolases 11
Zinc beta-ribbon Prokaryotic SH3-related domain 11
FAD/NAD(P)-binding domain NAD(P)-binding Rossmann-fold domains 11
Domain of the SRP/SRP receptor G-proteins P-loop containing nucleoside triphosphate hydrolases 11
Carbamate kinase-like ACT-like 11
Insert subdomain of RNA polymerase alpha subunit RBP11-like subunits of RNA polymerase 11
Ribonuclease PH domain 2-like Ribonuclease PH domain 2-like 11
P-loop containing nucleoside triphosphate hydrolases C-terminal UvrC-binding domain of UvrB 11
Rudiment single hybrid motif post-HMGL domain-like 11
Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 11
lambda repressor-like DNA-binding domains PYP-like sensor domain (PAS domain) 11
Tex N-terminal region-like Nucleic acid-binding proteins 11
N-terminal domain of MutM-like DNA repair proteins Glucocorticoid receptor-like (DNA-binding domain) 11
Actin-like ATPase domain Heat shock protein 70kD (HSP70), peptide-binding domain 11
Nucleic acid-binding proteins Prokaryotic type KH domain (KH-domain type II) 11
Thioesterase/thiol ester dehydrase-isomerase Isocitrate/Isopropylmalate dehydrogenase-like 11
DNA ligase/mRNA capping enzyme, catalytic domain BRCT domain 11
Nucleotidylyl transferase Alpha-L RNA-binding motif 11
PYP-like sensor domain (PAS domain) PYP-like sensor domain (PAS domain) 11
Single hybrid motif Thiamin diphosphate-binding fold (THDP-binding) 11
Acetyl-CoA synthetase-like Acetyl-CoA synthetase-like 11
Rhodanese/Cell cycle control phosphatase Rhodanese/Cell cycle control phosphatase 11
TolB, N-terminal domain Tricorn protease N-terminal domain 11
Fumarate reductase respiratory complex transmembrane subunits 2Fe-2S ferredoxin-like 11
5' to 3' exonuclease, C-terminal subdomain Ribonuclease H-like 11
Zinc beta-ribbon DNA primase core 11
Bacterial luciferase-like ACP-like 11
Thiolase-like Probable ACP-binding domain of malonyl-CoA ACP transacylase 11
Ribonuclease PH domain 2-like Nucleic acid-binding proteins 11
Trigger factor ribosome-binding domain FKBP-like 11
Class II aaRS and biotin synthetases Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) 11
GAF domain-like Phosphohistidine domain 11
DNA repair protein MutS, domain I DNA repair protein MutS, domain II 11
CoA-transferase family III (CaiB/BaiF) FMN-binding split barrel 11
DeoB insert domain-like Alkaline phosphatase-like 11
Nucleotidylyl transferase tRNA-binding arm 11
PUA domain-like S-adenosyl-L-methionine-dependent methyltransferases 11
FMT C-terminal domain-like Acetyl-CoA synthetase-like 11
Nucleotidyltransferase substrate binding subunit/domain Nucleotidyltransferase substrate binding subunit/domain 11
FMN-linked oxidoreductases Alpha subunit of glutamate synthase, C-terminal domain 11
Class II aaRS and biotin synthetases Anticodon-binding domain of PheRS 11
P-loop containing nucleoside triphosphate hydrolases CarD-like 11
YebC-like PFL-like glycyl radical enzymes 11
GreA transcript cleavage protein, N-terminal domain FKBP-like 11
FabD/lysophospholipase-like alpha/beta-Hydrolases 11
Gamma-glutamyl cyclotransferase-like Nudix 11
Oxidoreductase molybdopterin-binding domain E set domains 11
FAD/NAD(P)-binding domain Cytochrome b5-like heme/steroid binding domain 11
Transcription factor NusA, N-terminal domain Rad51 N-terminal domain-like 11
DNA-glycosylase Nudix 11
RuvA domain 2-like DNA helicase RuvA subunit, C-terminal domain 11
Aldolase Single hybrid motif 11
Aldolase post-HMGL domain-like 11
TROVE domain-like vWA-like 11
CO dehydrogenase ISP C-domain like CO dehydrogenase molybdoprotein N-domain-like 11
GIY-YIG endonuclease C-terminal UvrC-binding domain of UvrB 11
RmlC-like cupins RmlC-like cupins 11
Carbamoyl phosphate synthetase, large subunit connection domain Methylglyoxal synthase-like 11
Nucleotidyltransferase substrate binding subunit/domain ACT-like 11
MgtE N-terminal domain-like MgtE membrane domain-like 11
Nucleic acid-binding proteins Rad51 N-terminal domain-like 11
HlyD-like secretion proteins HlyD-like secretion proteins 11
P-loop containing nucleoside triphosphate hydrolases FtsH protease domain-like 11
"Winged helix" DNA-binding domain LexA/Signal peptidase 11
CheY-like Histidine-containing phosphotransfer domain, HPT domain 11
PreATP-grasp domain Carbamoyl phosphate synthetase, large subunit connection domain 11
DNA ligase/mRNA capping enzyme, catalytic domain RuvA domain 2-like 11
ALDH-like Thioesterase/thiol ester dehydrase-isomerase 11
NagB/RpiA/CoA transferase-like D-ribose-5-phosphate isomerase (RpiA), lid domain 11
PheT/TilS domain Anticodon-binding domain of PheRS 11
FMT C-terminal domain-like ACP-like 11
Aconitase iron-sulfur domain LeuD/IlvD-like 11
LysM domain Duplicated hybrid motif 11
Nitrite and sulphite reductase 4Fe-4S domain-like Nitrite and sulphite reductase 4Fe-4S domain-like 11
FAD-linked oxidoreductase ALDH-like 11
DnaK suppressor protein DksA, alpha-hairpin domain Glucocorticoid receptor-like (DNA-binding domain) 11
Ribosomal protein S5 domain 2-like DNA mismatch repair protein MutL 11
Cryptochrome/photolyase, N-terminal domain Cryptochrome/photolyase FAD-binding domain 11
Tautomerase/MIF NTF2-like 11
GroEL equatorial domain-like GroEL-intermediate domain like 11
Thiolase-like NAD(P)-binding Rossmann-fold domains 11
Carbamate kinase-like PUA domain-like 11
"Winged helix" DNA-binding domain HRDC-like 11
Nucleotidyltransferase substrate binding subunit/domain Poly A polymerase C-terminal region-like 11
P-loop containing nucleoside triphosphate hydrolases HRDC-like 11
lambda integrase-like, N-terminal domain DNA breaking-rejoining enzymes 11
P-loop containing nucleoside triphosphate hydrolases TGS-like 11
Glutamine synthetase/guanido kinase GatB/YqeY motif 11
NAD(P)-binding Rossmann-fold domains 1-deoxy-D-xylulose-5-phosphate reductoisomerase, C-terminal domain 11
Riboflavin synthase domain-like Riboflavin synthase domain-like 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) PRTase-like 11
CheY-like Nucleotide cyclase 11
DNA repair protein MutS, domain II P-loop containing nucleoside triphosphate hydrolases 11
PUA domain-like alpha/beta knot 11
NAD(P)-binding Rossmann-fold domains ACP-like 11
RNase III domain-like dsRNA-binding domain-like 11
6-phosphogluconate dehydrogenase C-terminal domain-like UDP-glucose/GDP-mannose dehydrogenase C-terminal domain 11
Tubulin nucleotide-binding domain-like Tubulin C-terminal domain-like 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) Alpha subunit of glutamate synthase, C-terminal domain 11
Periplasmic binding protein-like II ACT-like 11
Thiolase-like alpha/beta-Hydrolases 11
GAF domain-like P-loop containing nucleoside triphosphate hydrolases 11
C-terminal effector domain of the bipartite response regulators TPR-like 11
DNA repair protein MutS, domain I P-loop containing nucleoside triphosphate hydrolases 11
Urease metallochaperone UreE, N-terminal domain Urease metallochaperone UreE, C-terminal domain 11
NAD(P)-binding Rossmann-fold domains UDP-glucose/GDP-mannose dehydrogenase C-terminal domain 11
Putative DNA-binding domain Class II aaRS and biotin synthetases 11
Ribosomal L11/L12e N-terminal domain Ribosomal protein L11, C-terminal domain 11
Pre-protein crosslinking domain of SecA Helical scaffold and wing domains of SecA 11
PUA domain-like Ribosomal protein S5 domain 2-like 11
P-loop containing nucleoside triphosphate hydrolases TRCF domain-like 11
Ankyrin repeat Ankyrin repeat 11
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase Histidine-containing phosphotransfer domain, HPT domain 11
Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain Nucleotidylyl transferase 11
N-terminal domain of DnaB helicase P-loop containing nucleoside triphosphate hydrolases 11
MFS general substrate transporter MFS general substrate transporter 11
FAD/NAD(P)-binding domain PurM C-terminal domain-like 11
FAD/NAD(P)-binding domain 4Fe-4S ferredoxins 11
MFS general substrate transporter S-adenosyl-L-methionine-dependent methyltransferases 11
Glutathione synthetase ATP-binding domain-like Aldolase 11
Fumarate reductase respiratory complex transmembrane subunits Nucleotide cyclase 11
dsRNA-binding domain-like Ribosomal protein S5 domain 2-like 11
FliG FliG 11
alpha/beta-Hydrolases OsmC-like 11
Glutathione synthetase ATP-binding domain-like Phosphohistidine domain 11
DNA repair protein MutS, domain III P-loop containing nucleoside triphosphate hydrolases 11
5' to 3' exonuclease, C-terminal subdomain DNA/RNA polymerases 11
Ribonuclease H-like HRDC-like 11
FabD/lysophospholipase-like ACP-like 11
lambda repressor-like DNA-binding domains P-loop containing nucleoside triphosphate hydrolases 11
YjeF N-terminal domain-like Ribokinase-like 11
Nucleotide cyclase EAL domain-like 11
RuvA domain 2-like RuvA domain 2-like 11
Elongation factor Ts (EF-Ts), dimerisation domain Elongation factor Ts (EF-Ts), dimerisation domain 11
Folate-binding domain TrmE connector domain 11
Formyltransferase Bacterial luciferase-like 11
Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain Phosphohistidine domain 11
Bacterial muramidases Lysozyme-like 11
Thioredoxin-like Thioredoxin-like 11
P-loop containing nucleoside triphosphate hydrolases Signal peptide-binding domain 11
Periplasmic binding protein-like II Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain 11
PheT/TilS domain Putative DNA-binding domain 11
PDZ domain-like ClpP/crotonase 11
Nucleotide-binding domain FAD-linked reductases, C-terminal domain 11
MetI-like P-loop containing nucleoside triphosphate hydrolases 11
Nucleic acid-binding proteins ArfGap/RecO-like zinc finger 11
Translation proteins Translation proteins 11
RuvA domain 2-like JAB1/MPN domain 11
CorA soluble domain-like Magnesium transport protein CorA, transmembrane region 11
Carbon-nitrogen hydrolase Adenine nucleotide alpha hydrolases-like 11
Ribosomal protein S5 domain 2-like Nucleic acid-binding proteins 11
Single hybrid motif Single hybrid motif 11
Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain Phosphoenolpyruvate/pyruvate domain 11
Adenine nucleotide alpha hydrolases-like Adenine nucleotide alpha hydrolases-like 11
YrdC/RibB RibA-like 11
GAF domain-like GAF domain-like 11
L30e-like alpha/beta knot 11
HSP40/DnaJ peptide-binding domain HSP40/DnaJ peptide-binding domain 11
Ribonuclease H-like RuvA domain 2-like 11
Nucleic acid-binding proteins Anticodon-binding domain of PheRS 11
P-loop containing nucleoside triphosphate hydrolases PspA lactotransferrin-binding region 11
Transcription factor NusA, N-terminal domain Nucleic acid-binding proteins 11
CO dehydrogenase ISP C-domain like Molybdenum cofactor-binding domain 11
TK C-terminal domain-like Pyruvate-ferredoxin oxidoreductase, PFOR, domain III 11
Thioredoxin-like TPR-like 11
Leukotriene A4 hydrolase N-terminal domain Metalloproteases ("zincins"), catalytic domain 11
PR-1-like beta-Roll 11
Ribosomal protein S5 domain 2-like Eukaryotic type KH-domain (KH-domain type I) 11
alpha/beta-Hydrolases Galactose-binding domain-like 11
Acetyl-CoA synthetase-like Bacterial luciferase-like 11
P-loop containing nucleoside triphosphate hydrolases Initiation factor IF2/eIF5b, domain 3 11
ACT-like Acyl-CoA N-acyltransferases (Nat) 11
Fe-S cluster assembly (FSCA) domain-like P-loop containing nucleoside triphosphate hydrolases 11
HD-domain/PDEase-like ACT-like 11
Subtilisin-like Trypsin-like serine proteases 11
SAM/Pointed domain P-loop containing nucleoside triphosphate hydrolases 11
Nitrite/Sulfite reductase N-terminal domain-like Nitrite/Sulfite reductase N-terminal domain-like 11
HD-domain/PDEase-like TGS-like 11
FabD/lysophospholipase-like NAD(P)-binding Rossmann-fold domains 11
Tex N-terminal region-like Ribonuclease H-like 11
DNA methylase specificity domain DNA methylase specificity domain 11
Adenine nucleotide alpha hydrolases-like Argininosuccinate synthetase, C-terminal domain 11
Nucleotide cyclase TPR-like 11
Nucleotide-binding domain FAD/NAD(P)-binding domain 11
Thiamin pyrophosphokinase, catalytic domain Thiamin pyrophosphokinase, substrate-binding domain 11
HAMP domain-like PYP-like sensor domain (PAS domain) 11
GAF domain-like Nucleotide cyclase 11
DNA repair protein MutS, domain I DNA repair protein MutS, domain III 11
Nucleic acid-binding proteins DNA helicase RuvA subunit, C-terminal domain 11
2Fe-2S ferredoxin-like Molybdenum cofactor-binding domain 11
P-loop containing nucleoside triphosphate hydrolases Smc hinge domain 11
Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 1-deoxy-D-xylulose-5-phosphate reductoisomerase, C-terminal domain 11
"Winged helix" DNA-binding domain CheY-like 11
TGS-like ACT-like 11
Rho N-terminal domain-like P-loop containing nucleoside triphosphate hydrolases 11
Actin-like ATPase domain HD-domain/PDEase-like 11
Serine metabolism enzymes domain ACT-like 11
6-phosphogluconate dehydrogenase C-terminal domain-like Thioesterase/thiol ester dehydrase-isomerase 11
C-terminal effector domain of the bipartite response regulators alpha/beta-Hydrolases 11
Ada DNA repair protein, N-terminal domain (N-Ada 10) Methylated DNA-protein cysteine methyltransferase, C-terminal domain 11
2Fe-2S ferredoxin-like CO dehydrogenase flavoprotein C-terminal domain-like 11
L21p-like Rad51 N-terminal domain-like 11
Homo-oligomeric flavin-containing Cys decarboxylases, HFCD CoaB-like 11
MgtE N-terminal domain-like CBS-domain pair 11
"Winged helix" DNA-binding domain Bet v1-like 11
post-HMGL domain-like Single hybrid motif 11
Fe,Mn superoxide dismutase (SOD), N-terminal domain Fe,Mn superoxide dismutase (SOD), C-terminal domain 11
Fumarylacetoacetate hydrolase, FAH, N-terminal domain FAH 11
P-loop containing nucleoside triphosphate hydrolases CHY zinc finger-like 11
Diaminopimelate epimerase-like Diaminopimelate epimerase-like 11
RmlC-like cupins Homeodomain-like 11
cAMP-binding domain-like CBS-domain pair 11
Pectin lyase-like Cytochrome c 11
CheY-like PP2C-like 11
Rudiment single hybrid motif Aldolase 11
ValRS/IleRS/LeuRS editing domain tRNA-binding arm 11
Ribonuclease H-like Nucleic acid-binding proteins 11
Translation proteins Initiation factor IF2/eIF5b, domain 3 11
EspE N-terminal domain-like Nucleotide-diphospho-sugar transferases 11
Glycoside hydrolase/deacetylase UraD-Like 11
Carbamoyl phosphate synthetase, small subunit N-terminal domain Class I glutamine amidotransferase-like 11
FMN-linked oxidoreductases 4Fe-4S ferredoxins 11
Homeodomain-like Probable bacterial effector-binding domain 11
GAF domain-like Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain 11
PreATP-grasp domain post-HMGL domain-like 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) FMN-linked oxidoreductases 11
Glutathione synthetase ATP-binding domain-like Methylglyoxal synthase-like 11
PIN domain-like Ribonuclease H-like 11
PKD domain PKD domain 11
"Winged helix" DNA-binding domain Actin-like ATPase domain 11
S-adenosyl-L-methionine-dependent methyltransferases Putative methyltransferase TM0872, insert domain 11
P-loop containing nucleoside triphosphate hydrolases RecA protein, C-terminal domain 11
Ribosomal protein L6 Ribosomal protein L6 11
PurM N-terminal domain-like PurM N-terminal domain-like 11
Glutathione synthetase ATP-binding domain-like Glutathione synthetase ATP-binding domain-like 11
CBS-domain pair Inosine monophosphate dehydrogenase (IMPDH) 11
2Fe-2S ferredoxin-like Nucleotide cyclase 11
Heme-dependent peroxidases Heme-dependent peroxidases 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) SIS domain 11
Formate/glycerate dehydrogenase catalytic domain-like ACT-like 11
RBP11-like subunits of RNA polymerase C-terminal domain of RNA polymerase alpha subunit 11
Class I glutamine amidotransferase-like GMP synthetase C-terminal dimerisation domain 11
HMA, heavy metal-associated domain HMA, heavy metal-associated domain 11
Phospholipase D/nuclease Phospholipase D/nuclease 11
GroEL equatorial domain-like GroEL apical domain-like 11
PGBD-like L,D-transpeptidase catalytic domain-like 11
Methionyl-tRNA synthetase (MetRS), Zn-domain Nucleotidylyl transferase 11
Adenine nucleotide alpha hydrolases-like GMP synthetase C-terminal dimerisation domain 11
N-terminal domain of bifunctional PutA protein FAD-linked oxidoreductase 11
N-terminal domain of bifunctional PutA protein ALDH-like 11
GroEL-intermediate domain like GroEL apical domain-like 11
all-alpha NTP pyrophosphatases all-alpha NTP pyrophosphatases 11
Acetyl-CoA synthetase-like ACP-like 11
Prokaryotic type I DNA topoisomerase Zinc beta-ribbon 11
Ribosomal protein S5 domain 2-like GHMP Kinase, C-terminal domain 11
TGS-like Class II aaRS and biotin synthetases 11
NAD(P)-binding Rossmann-fold domains alpha/beta-Hydrolases 11
Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain ACT-like 11
NusB-like S-adenosyl-L-methionine-dependent methyltransferases 11
Glutathione synthetase ATP-binding domain-like Phosphoenolpyruvate/pyruvate domain 11
Rho N-terminal domain-like Nucleic acid-binding proteins 11
PheT/TilS domain Class II aaRS and biotin synthetases 11
Nucleotide cyclase P-loop containing nucleoside triphosphate hydrolases 11
Chaperone J-domain DnaJ/Hsp40 cysteine-rich domain 11
PH0987 N-terminal domain-like Cyclophilin-like 11
2Fe-2S ferredoxin-like FAD-binding/transporter-associated domain-like 11
Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) Translation proteins 11
Chaperone J-domain HSP40/DnaJ peptide-binding domain 11
CBS-domain pair Nucleotidyltransferase 11
"Winged helix" DNA-binding domain Phosphotyrosine protein phosphatases I 11
Adenine nucleotide alpha hydrolases-like DHS-like NAD/FAD-binding domain 11
Nucleotidyltransferase Nucleotidyltransferase 11
Prokaryotic type KH domain (KH-domain type II) Rad51 N-terminal domain-like 11
Probable ACP-binding domain of malonyl-CoA ACP transacylase ACP-like 11
Hsp33 domain HSP33 redox switch-like 11
NAD(P)-binding Rossmann-fold domains Thioesterase/thiol ester dehydrase-isomerase 11
C-terminal UvrC-binding domain of UvrB RuvA domain 2-like 11
GAF domain-like C-terminal effector domain of the bipartite response regulators 11
Coiled-coil domain of nucleotide exchange factor GrpE Head domain of nucleotide exchange factor GrpE 11
(Trans)glycosidases beta-Roll 11
TGS-like ThrRS/AlaRS common domain 11
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase DNA mismatch repair protein MutL 11
Translation proteins Ribosomal protein S5 domain 2-like 11
Glutathione synthetase ATP-binding domain-like Carbamoyl phosphate synthetase, large subunit connection domain 11
WD40 repeat-like Cytochrome c 11
PUA domain-like Nucleotidylyl transferase 11
NAD(P)-binding Rossmann-fold domains LDH C-terminal domain-like 11
Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain Pyrimidine nucleoside phosphorylase C-terminal domain 11
Methylglyoxal synthase-like Cytidine deaminase-like 11
Insert subdomain of RNA polymerase alpha subunit C-terminal domain of RNA polymerase alpha subunit 11
Tex N-terminal region-like RuvA domain 2-like 11
Prokaryotic type KH domain (KH-domain type II) Prokaryotic type KH domain (KH-domain type II) 11
Class I glutamine amidotransferase-like Adenine nucleotide alpha hydrolases-like 11
P-loop containing nucleoside triphosphate hydrolases TrpR-like 11
Formyltransferase ACP-like 11
P-loop containing nucleoside triphosphate hydrolases Prokaryotic type KH domain (KH-domain type II) 11
FAD-linked reductases, C-terminal domain 4Fe-4S ferredoxins 11
FAD-binding/transporter-associated domain-like Uridine diphospho-N-Acetylenolpyruvylglucosamine reductase, MurB, C-terminal domain 11
Homodimeric domain of signal transducing histidine kinase Histidine-containing phosphotransfer domain, HPT domain 11
Single hybrid motif alpha/beta-Hydrolases 11
Poly A polymerase C-terminal region-like ACT-like 11
CO dehydrogenase ISP C-domain like FAD-binding/transporter-associated domain-like 11
NAD(P)-binding Rossmann-fold domains Serine metabolism enzymes domain 11
PK beta-barrel domain-like Phosphoenolpyruvate/pyruvate domain 11
Tetrapyrrole methylase S-adenosyl-L-methionine-dependent methyltransferases 11

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