SUPERFAMILY 1.75 HMM library and genome assignments server

Domain combination pairs in Amborella trichopoda 22

All pairs of domain combinations at the superfamily level are listed here.
The identification of domain pairs does not account for the possibility of non-contiguous domains. Inserted, or interlaced, domains are seen as having a simple pair ordering.

  • For a list of unique full length architectures for this genome click here (can be slow).
Adjacent domain pairs graph

Graph of adjacent domain pairs.


Add or remove domain pairs

The links below permit the addition or removal of specific sets of domain combination pairs.


Jump to [ Top of page · Add/remove domain pairs · Domain combination pairs ]

Add or remove genomes

Change the list of genome two-letter codes in the 'Include genomes' box to include domain-pairs from those genomes.
Change the list of genomes in the 'Exclude genomes' box to exclude domain-pairs from those genomes.
List of all two-letter genome codes.

Add or remove genomes:
Include genomes:
Exclude genomes:


Jump to [ Top of page · Add/remove domain pairs · Add/remove genomes ]

Domain combination pairs

1369 domain combination pairs.
Click on a column heading to sort that column, or the 'View' button to see domain architetures for that domain pair combination.

Superfamily (N) Superfamily (C) Number of occurrances Number unique
P-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases 13151
L domain-like Protein kinase-like (PK-like) 12231
L domain-like L domain-like 8140
RNA-binding domain, RBD RNA-binding domain, RBD 6718
P-loop containing nucleoside triphosphate hydrolases L domain-like 5720
TPR-like TPR-like 5218
F-box domain RNI-like 468
L domain-like RNI-like 4632
GroES-like NAD(P)-binding Rossmann-fold domains 436
Thioredoxin-like GST C-terminal domain-like 396
ARM repeat ARM repeat 3827
Multidrug resistance efflux transporter EmrE Multidrug resistance efflux transporter EmrE 387
Actin-like ATPase domain Actin-like ATPase domain 3715
Concanavalin A-like lectins/glucanases Protein kinase-like (PK-like) 365
ABC transporter transmembrane region P-loop containing nucleoside triphosphate hydrolases 3610
RING/U-box ARM repeat 3411
RNI-like Protein kinase-like (PK-like) 3219
alpha-D-mannose-specific plant lectins Protein kinase-like (PK-like) 309
HAD-like Calcium ATPase, transmembrane domain M 2910
Thiolase-like Thiolase-like 283
Calcium ATPase, transduction domain A Calcium ATPase, transmembrane domain M 289
ABC transporter transmembrane region ABC transporter transmembrane region 276
FAD/NAD(P)-binding domain FAD-linked reductases, C-terminal domain 267
Calcium ATPase, transduction domain A HAD-like 268
Cupredoxins Cupredoxins 247
S-adenosyl-L-methionine-dependent methyltransferases S-adenosyl-L-methionine-dependent methyltransferases 235
Plant invertase/pectin methylesterase inhibitor Pectin lyase-like 233
F-box domain Kelch motif 225
GroEL equatorial domain-like GroEL-intermediate domain like 226
RNI-like RNI-like 2213
(Trans)glycosidases Glycosyl hydrolase domain 2212
NAD(P)-binding Rossmann-fold domains 6-phosphogluconate dehydrogenase C-terminal domain-like 216
Periplasmic binding protein-like I Periplasmic binding protein-like II 216
GroEL apical domain-like GroEL-intermediate domain like 217
FAD/NAD(P)-binding domain FAD/NAD(P)-binding domain 217
GroEL equatorial domain-like GroEL apical domain-like 217
NAD(P)-binding Rossmann-fold domains Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 207
Toll/Interleukin receptor TIR domain P-loop containing nucleoside triphosphate hydrolases 199
CRAL/TRIO N-terminal domain CRAL/TRIO domain 197
P-loop containing nucleoside triphosphate hydrolases Translation proteins 188
P-loop containing nucleoside triphosphate hydrolases "Winged helix" DNA-binding domain 1812
Cyclin-like Cyclin-like 186
Galactose-binding domain-like (Trans)glycosidases 178
Calcium ATPase, transmembrane domain M Metal cation-transporting ATPase, ATP-binding domain N 174
Riboflavin synthase domain-like Ferredoxin reductase-like, C-terminal NADP-linked domain 167
beta-beta-alpha zinc fingers beta-beta-alpha zinc fingers 1611
alpha-D-mannose-specific plant lectins alpha-D-mannose-specific plant lectins 164
RING/U-box RING/U-box 1614
Eukaryotic type KH-domain (KH-domain type I) Eukaryotic type KH-domain (KH-domain type I) 1610
ENTH/VHS domain GAT-like domain 154
CCCH zinc finger CCCH zinc finger 1512
Calcium ATPase, transduction domain A Metal cation-transporting ATPase, ATP-binding domain N 153
Tubulin nucleotide-binding domain-like Tubulin C-terminal domain-like 153
Terpenoid cyclases/Protein prenyltransferases Terpenoid synthases 154
Metal cation-transporting ATPase, ATP-binding domain N HAD-like 153
Protein kinase-like (PK-like) EF-hand 152
Homeodomain-like Homeodomain-like 159
Beta-D-glucan exohydrolase, C-terminal domain (Trans)glycosidases 143
Nucleic acid-binding proteins Nucleic acid-binding proteins 1411
Thioredoxin-like Thioredoxin-like 1312
"Winged helix" DNA-binding domain L domain-like 137
Aminoacid dehydrogenase-like, N-terminal domain NAD(P)-binding Rossmann-fold domains 135
C2 domain (Calcium/lipid-binding domain, CaLB) C2 domain (Calcium/lipid-binding domain, CaLB) 138
Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) 136
HSP40/DnaJ peptide-binding domain HSP40/DnaJ peptide-binding domain 136
Toll/Interleukin receptor TIR domain L domain-like 136
P-loop containing nucleoside triphosphate hydrolases post-AAA+ oligomerization domain-like 135
WD40 repeat-like WD40 repeat-like 1311
HCP-like HCP-like 136
Purple acid phosphatase, N-terminal domain Metallo-dependent phosphatases 133
P-loop containing nucleoside triphosphate hydrolases FtsH protease domain-like 133
Barwin-like endoglucanases PHL pollen allergen 131
LuxS/MPP-like metallohydrolase LuxS/MPP-like metallohydrolase 127
F-box domain Galactose oxidase, central domain 123
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase Ribosomal protein S5 domain 2-like 117
Chaperone J-domain HSP40/DnaJ peptide-binding domain 115
FYVE/PHD zinc finger FYVE/PHD zinc finger 119
GroES-like GroES-like 113
DNA-binding domain DNA-binding domain 113
Ypt/Rab-GAP domain of gyp1p Ypt/Rab-GAP domain of gyp1p 113
Nucleic acid-binding proteins P-loop containing nucleoside triphosphate hydrolases 115
Zn-dependent exopeptidases Bacterial exopeptidase dimerisation domain 114
Protein kinase-like (PK-like) ARM repeat 1111
Ribosomal protein S5 domain 2-like GHMP Kinase, C-terminal domain 115
Voltage-gated potassium channels cAMP-binding domain-like 113
Actin-like ATPase domain Heat shock protein 70kD (HSP70), peptide-binding domain 117
Toll/Interleukin receptor TIR domain "Winged helix" DNA-binding domain 104
HCP-like TPR-like 105
Nucleotidylyl transferase Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 107
YhbY-like YhbY-like 105
RING/U-box P-loop containing nucleoside triphosphate hydrolases 107
ARM repeat WD40 repeat-like 99
Ubiquitin-like UBA-like 98
ACT-like ACT-like 96
Nucleotidyltransferase PAP/OAS1 substrate-binding domain 94
dsRNA-binding domain-like dsRNA-binding domain-like 97
Translation proteins EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 92
Homeodomain-like Bet v1-like 94
Phospholipase D/nuclease Phospholipase D/nuclease 97
PAZ domain Ribonuclease H-like 92
EF-G C-terminal domain-like EF-G C-terminal domain-like 97
Galactose-binding domain-like Galactose-binding domain-like 93
Thiamin diphosphate-binding fold (THDP-binding) TK C-terminal domain-like 94
PK beta-barrel domain-like Phosphoenolpyruvate/pyruvate domain 93
DNA-binding pseudobarrel domain CAD & PB1 domains 93
Class II aaRS and biotin synthetases Class II aaRS ABD-related 99
SNARE-like SNARE fusion complex 92
P-loop containing nucleoside triphosphate hydrolases EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 92
FAD/NAD(P)-binding domain FAD/NAD-linked reductases, dimerisation (C-terminal) domain 83
PK beta-barrel domain-like PK C-terminal domain-like 82
Phosphoenolpyruvate/pyruvate domain PK C-terminal domain-like 82
BRCT domain BRCT domain 88
Trypsin-like serine proteases PDZ domain-like 84
Actin-like ATPase domain Heat shock protein 70kD (HSP70), C-terminal subdomain 85
"Winged helix" DNA-binding domain S-adenosyl-L-methionine-dependent methyltransferases 81
RNA-binding domain, RBD Retrovirus zinc finger-like domains 86
Heat shock protein 70kD (HSP70), peptide-binding domain Heat shock protein 70kD (HSP70), C-terminal subdomain 85
Protein kinase-like (PK-like) TPR-like 84
Galactose oxidase, central domain E set domains 82
DNA repair protein MutS, domain III P-loop containing nucleoside triphosphate hydrolases 84
PreATP-grasp domain Glutathione synthetase ATP-binding domain-like 87
Formate/glycerate dehydrogenase catalytic domain-like NAD(P)-binding Rossmann-fold domains 84
P-loop containing nucleoside triphosphate hydrolases C-terminal domain of alpha and beta subunits of F1 ATP synthase 85
Homodimeric domain of signal transducing histidine kinase ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 85
FYVE/PHD zinc finger RING/U-box 88
Translation proteins EF-G C-terminal domain-like 86
Bet v1-like Bet v1-like 84
Glucocorticoid receptor-like (DNA-binding domain) Glucocorticoid receptor-like (DNA-binding domain) 84
RING/U-box WD40 repeat-like 86
DnaJ/Hsp40 cysteine-rich domain HSP40/DnaJ peptide-binding domain 85
Nucleic acid-binding proteins Class II aaRS and biotin synthetases 75
P-loop containing nucleoside triphosphate hydrolases Ribosomal protein S5 domain 2-like 76
CCCH zinc finger RNA-binding domain, RBD 75
RING/U-box Nucleotide-diphospho-sugar transferases 72
Lipase/lipooxygenase domain (PLAT/LH2 domain) Lipoxigenase 72
Subtilisin-like PA domain 72
beta-sandwich domain of Sec23/24 vWA-like 74
FAD-binding/transporter-associated domain-like FAD-linked oxidases, C-terminal domain 73
FYVE/PHD zinc finger P-loop containing nucleoside triphosphate hydrolases 77
P-loop containing nucleoside triphosphate hydrolases ARM repeat 76
CheY-like Homeodomain-like 72
beta-sandwich domain of Sec23/24 Helical domain of Sec23/24 74
Ribosomal protein S5 domain 2-like Ribonuclease PH domain 2-like 74
N-terminal domain of alpha and beta subunits of F1 ATP synthase P-loop containing nucleoside triphosphate hydrolases 75
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase CheY-like 74
Homodimeric domain of signal transducing histidine kinase CheY-like 74
CBS-domain pair CBS-domain pair 76
NAD(P)-binding Rossmann-fold domains LDH C-terminal domain-like 71
ValRS/IleRS/LeuRS editing domain Nucleotidylyl transferase 75
E set domains (Trans)glycosidases 75
beta-sandwich domain of Sec23/24 Zn-finger domain of Sec23/24 74
P-loop containing nucleoside triphosphate hydrolases EF-G C-terminal domain-like 75
Zn-finger domain of Sec23/24 Helical domain of Sec23/24 74
E set domains Glycosyl hydrolase domain 75
Zn-finger domain of Sec23/24 vWA-like 74
PIN domain-like 5' to 3' exonuclease, C-terminal subdomain 73
vWA-like Helical domain of Sec23/24 74
Sigma2 domain of RNA polymerase sigma factors Sigma3 and sigma4 domains of RNA polymerase sigma factors 62
Retrovirus zinc finger-like domains Retrovirus zinc finger-like domains 66
WRKY DNA-binding domain WRKY DNA-binding domain 62
Thioesterase/thiol ester dehydrase-isomerase Thioesterase/thiol ester dehydrase-isomerase 64
2Fe-2S ferredoxin-like CO dehydrogenase ISP C-domain like 65
CO dehydrogenase ISP C-domain like CO dehydrogenase flavoprotein C-terminal domain-like 65
RING/U-box TRAF domain-like 63
CO dehydrogenase ISP C-domain like FAD-binding/transporter-associated domain-like 65
Enolase N-terminal domain-like Enolase C-terminal domain-like 63
Zn-finger domain of Sec23/24 C-terminal, gelsolin-like domain of Sec23/24 63
DNA/RNA polymerases Ribonuclease H-like 64
Glutathione synthetase ATP-binding domain-like Rudiment single hybrid motif 65
vWA-like C-terminal, gelsolin-like domain of Sec23/24 63
Helical domain of Sec23/24 C-terminal, gelsolin-like domain of Sec23/24 63
HMA, heavy metal-associated domain HAD-like 65
MFS general substrate transporter MFS general substrate transporter 62
HMA, heavy metal-associated domain Calcium ATPase, transduction domain A 65
Acyl-CoA dehydrogenase NM domain-like Acyl-CoA dehydrogenase C-terminal domain-like 65
Plant lectins/antimicrobial peptides Lysozyme-like 62
Adenine nucleotide alpha hydrolases-like Protein kinase-like (PK-like) 63
Single hybrid motif CoA-dependent acyltransferases 64
SNARE-like Second domain of Mu2 adaptin subunit (ap50) of ap2 adaptor 62
Chromo domain-like Chromo domain-like 66
Nucleotide-diphospho-sugar transferases Trimeric LpxA-like enzymes 63
P-loop containing nucleoside triphosphate hydrolases RNI-like 65
HAD-like BRCT domain 62
Chaperone J-domain DnaJ/Hsp40 cysteine-rich domain 64
P-loop containing nucleoside triphosphate hydrolases Smc hinge domain 65
HMA, heavy metal-associated domain Calcium ATPase, transmembrane domain M 65
2Fe-2S ferredoxin-like FAD-binding/transporter-associated domain-like 65
2Fe-2S ferredoxin-like CO dehydrogenase flavoprotein C-terminal domain-like 65
PUA domain-like SET domain 62
(Trans)glycosidases Galactose mutarotase-like 64
PreATP-grasp domain Rudiment single hybrid motif 65
P-loop containing nucleoside triphosphate hydrolases E set domains 63
P-loop containing nucleoside triphosphate hydrolases dsRNA-binding domain-like 65
PH domain-like FYVE/PHD zinc finger 62
PYP-like sensor domain (PAS domain) PYP-like sensor domain (PAS domain) 66
Clc chloride channel CBS-domain pair 63
FAD-binding/transporter-associated domain-like CO dehydrogenase flavoprotein C-terminal domain-like 65
CO dehydrogenase ISP C-domain like Molybdenum cofactor-binding domain 65
P-loop containing nucleoside triphosphate hydrolases Ankyrin repeat 63
HMA, heavy metal-associated domain HMA, heavy metal-associated domain 65
ValRS/IleRS/LeuRS editing domain Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 64
PEP carboxykinase N-terminal domain PEP carboxykinase-like 61
beta-sandwich domain of Sec23/24 C-terminal, gelsolin-like domain of Sec23/24 63
Thiamin diphosphate-binding fold (THDP-binding) DHS-like NAD/FAD-binding domain 63
CO dehydrogenase molybdoprotein N-domain-like Molybdenum cofactor-binding domain 65
UDP-Glycosyltransferase/glycogen phosphorylase HAD-like 63
Glutamine synthetase, N-terminal domain Glutamine synthetase/guanido kinase 53
Sigma3 and sigma4 domains of RNA polymerase sigma factors Sigma3 and sigma4 domains of RNA polymerase sigma factors 51
FYVE/PHD zinc finger Acyl-CoA N-acyltransferases (Nat) 53
Homeodomain-like FAD-linked reductases, C-terminal domain 52
CO dehydrogenase flavoprotein C-terminal domain-like CO dehydrogenase molybdoprotein N-domain-like 54
Phosphoglucomutase, first 3 domains Phosphoglucomutase, first 3 domains 55
Sec7 domain ARM repeat 54
Cation efflux protein transmembrane domain-like Cation efflux protein cytoplasmic domain-like 53
FAS1 domain FAS1 domain 52
RCC1/BLIP-II FYVE/PHD zinc finger 51
(Phosphotyrosine protein) phosphatases II C2 domain (Calcium/lipid-binding domain, CaLB) 54
Translation proteins SH3-like domain Nucleic acid-binding proteins 53
Composite domain of metallo-dependent hydrolases Metallo-dependent hydrolases 53
DNA ligase/mRNA capping enzyme, catalytic domain Nucleic acid-binding proteins 55
Double Clp-N motif P-loop containing nucleoside triphosphate hydrolases 54
C2 domain (Calcium/lipid-binding domain, CaLB) Phospholipase D/nuclease 53
EF-hand Ferredoxin reductase-like, C-terminal NADP-linked domain 51
RING/U-box Protein kinase-like (PK-like) 54
CO dehydrogenase flavoprotein C-terminal domain-like Molybdenum cofactor-binding domain 54
2Fe-2S ferredoxin-like CO dehydrogenase molybdoprotein N-domain-like 54
Ankyrin repeat Protein kinase-like (PK-like) 52
Ribosomal protein S5 domain 2-like HSP90 C-terminal domain 52
RNase III domain-like RNase III domain-like 55
Ribosomal protein L7/12, oligomerisation (N-terminal) domain ClpS-like 52
RING/U-box vWA-like 52
CO dehydrogenase ISP C-domain like CO dehydrogenase molybdoprotein N-domain-like 54
PH domain-like RCC1/BLIP-II 51
Peptidase/esterase 'gauge' domain alpha/beta-Hydrolases 52
FAD-binding/transporter-associated domain-like CO dehydrogenase molybdoprotein N-domain-like 54
"Winged helix" DNA-binding domain "Winged helix" DNA-binding domain 55
ISP domain Bet v1-like 52
cAMP-binding domain-like Ankyrin repeat 52
Domain of the SRP/SRP receptor G-proteins P-loop containing nucleoside triphosphate hydrolases 53
2Fe-2S ferredoxin-like Molybdenum cofactor-binding domain 54
Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex CoA-dependent acyltransferases 53
EF-G C-terminal domain-like Ribosomal protein S5 domain 2-like 54
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase HSP90 C-terminal domain 52
Cullin homology domain "Winged helix" DNA-binding domain 54
Translation proteins Ribosomal protein S5 domain 2-like 54
EF-hand Riboflavin synthase domain-like 51
Protein kinase-like (PK-like) WD40 repeat-like 54
DNA-binding pseudobarrel domain DNA-binding pseudobarrel domain 51
Cryptochrome/photolyase, N-terminal domain Cryptochrome/photolyase FAD-binding domain 53
Single hybrid motif Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex 53
Voltage-gated potassium channels Ankyrin repeat 52
FYVE/PHD zinc finger Homeodomain-like 53
RNase III domain-like dsRNA-binding domain-like 55
Homeodomain-like FAD/NAD(P)-binding domain 52
FAD-binding/transporter-associated domain-like Molybdenum cofactor-binding domain 54
Chromo domain-like P-loop containing nucleoside triphosphate hydrolases 55
SET domain RuBisCo LSMT C-terminal, substrate-binding domain 52
Concanavalin A-like lectins/glucanases P-domain of calnexin/calreticulin 42
BEACH domain WD40 repeat-like 44
P-loop containing nucleoside triphosphate hydrolases Sec63 N-terminal domain-like 44
HLH, helix-loop-helix DNA-binding domain ACT-like 41
RCC1/BLIP-II RCC1/BLIP-II 41
Leukotriene A4 hydrolase N-terminal domain Metalloproteases ("zincins"), catalytic domain 43
Translational machinery components L30e-like 42
FKBP-like TPR-like 42
RING/U-box Cysteine proteinases 44
Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like 43
Class II aaRS and biotin synthetases ThrRS/AlaRS common domain 44
Creatinase/prolidase N-terminal domain Creatinase/aminopeptidase 44
PYP-like sensor domain (PAS domain) Protein kinase-like (PK-like) 44
ARM repeat Hect, E3 ligase catalytic domain 44
WW domain WW domain 44
GAF domain-like ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 43
"Winged helix" DNA-binding domain RNA-binding domain, RBD 42
Nucleic acid-binding proteins Eukaryotic type KH-domain (KH-domain type I) 43
MurD-like peptide ligases, catalytic domain MurD-like peptide ligases, peptide-binding domain 44
Actin-crosslinking proteins (Trans)glycosidases 41
DNA repair protein MutS, domain I P-loop containing nucleoside triphosphate hydrolases 43
TRAF domain-like POZ domain 41
E set domains Ankyrin repeat 41
Cdc48 domain 2-like P-loop containing nucleoside triphosphate hydrolases 43
Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain 43
Phosphoglucomutase, first 3 domains Phosphoglucomutase, C-terminal domain 44
FYVE/PHD zinc finger SET domain 44
Galactose mutarotase-like Glycosyl hydrolase domain 42
P-loop containing nucleoside triphosphate hydrolases RNase III domain-like 44
Arabinanase/levansucrase/invertase Concanavalin A-like lectins/glucanases 42
F-box domain WD40 repeat-like 43
TAZ domain RING/U-box 44
CAD & PB1 domains Protein kinase-like (PK-like) 41
UBA-like UBA-like 44
HD-domain/PDEase-like Nucleotidyltransferase 44
Terpenoid cyclases/Protein prenyltransferases Terpenoid cyclases/Protein prenyltransferases 43
DPP6 N-terminal domain-like alpha/beta-Hydrolases 42
ARID-like HMG-box 42
Periplasmic binding protein-like II ACT-like 42
Thioredoxin-like TPR-like 44
Transducin (alpha subunit), insertion domain P-loop containing nucleoside triphosphate hydrolases 42
Voltage-gated potassium channels Voltage-gated potassium channels 43
Coiled-coil domain of nucleotide exchange factor GrpE Head domain of nucleotide exchange factor GrpE 41
Ran binding protein zinc finger-like Ran binding protein zinc finger-like 44
ClpP/crotonase ClpP/crotonase 43
Ribosomal L11/L12e N-terminal domain Ribosomal protein L11, C-terminal domain 43
Zinc hairpin stack RING/U-box 43
PAZ domain RNase III domain-like 44
WD40 repeat-like Quinoprotein alcohol dehydrogenase-like 43
N-terminal domain of alpha and beta subunits of F1 ATP synthase C-terminal domain of alpha and beta subunits of F1 ATP synthase 43
ARM repeat Clathrin adaptor appendage domain 44
NagB/RpiA/CoA transferase-like D-ribose-5-phosphate isomerase (RpiA), lid domain 42
EGF/Laminin Protein kinase-like (PK-like) 42
"Winged helix" DNA-binding domain E2F-DP heterodimerization region 42
EF-hand EF-hand 44
Acid proteases Acid proteases 42
ARM repeat TPR-like 43
P-loop containing nucleoside triphosphate hydrolases PAZ domain 44
Arp2/3 complex subunits Arp2/3 complex subunits 32
F-box domain Tubby C-terminal domain-like 32
PH domain-like Oxysterol-binding protein-like 32
Glucocorticoid receptor-like (DNA-binding domain) AN1-like Zinc finger 31
Translation initiation factor 2 beta, aIF2beta, N-terminal domain Zinc-binding domain of translation initiation factor 2 beta 32
SET domain TPR-like 32
FKBP-like FKBP-like 31
SAP domain RNA-binding domain, RBD 32
PAZ domain dsRNA-binding domain-like 33
PLP-binding barrel Alanine racemase C-terminal domain-like 32
Cysteine proteinases Granulin repeat 32
DNA/RNA polymerases Lesion bypass DNA polymerase (Y-family), little finger domain 32
6-phosphogluconate dehydrogenase C-terminal domain-like 6-phosphogluconate dehydrogenase C-terminal domain-like 31
Glutathione synthetase ATP-binding domain-like Succinyl-CoA synthetase domains 31
Nucleic acid-binding proteins Retrovirus zinc finger-like domains 33
WGR domain-like ADP-ribosylation 32
TPR-like Chaperone J-domain 33
Translation proteins Initiation factor IF2/eIF5b, domain 3 32
BAR/IMD domain-like SH3-domain 31
Aldolase Aminoacid dehydrogenase-like, N-terminal domain 32
ADC-like P-loop containing nucleoside triphosphate hydrolases 32
Eukaryotic RPB5 N-terminal domain RPB5-like RNA polymerase subunit 32
Obg GTP-binding protein N-terminal domain P-loop containing nucleoside triphosphate hydrolases 33
P-loop containing nucleoside triphosphate hydrolases Signal peptide-binding domain 32
Thioredoxin-like Cysteine-rich domain 33
RCC1/BLIP-II Protein kinase-like (PK-like) 33
EF-hand C2 domain (Calcium/lipid-binding domain, CaLB) 32
CHY zinc finger-like RING/U-box 32
FF domain FF domain 33
N-terminal domain of eukaryotic peptide chain release factor subunit 1, ERF1 Translational machinery components 32
Ubiquitin-like Zn-binding ribosomal proteins 31
PYP-like sensor domain (PAS domain) GAF domain-like 33
Voltage-gated potassium channels EF-hand 33
P-loop containing nucleoside triphosphate hydrolases TGS-like 33
Ankyrin repeat RING/U-box 32
Cysteine-rich domain Cysteine-rich domain 32
Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain SAICAR synthase-like 33
Families 57/38 glycoside transferase middle domain Galactose mutarotase-like 32
PH domain-like BEACH domain 33
PDZ domain-like ClpP/crotonase 31
Tudor/PWWP/MBT FYVE/PHD zinc finger 33
P-loop containing nucleoside triphosphate hydrolases PRTase-like 31
Cysteine proteinases DUSP-like 32
Class I glutamine amidotransferase-like Class I glutamine amidotransferase-like 31
Voltage-gated potassium channels Periplasmic binding protein-like II 33
SET domain Tudor/PWWP/MBT 33
Thioredoxin-like Ubiquitin-like 32
GAF domain-like Homodimeric domain of signal transducing histidine kinase 32
CHY zinc finger-like Zinc hairpin stack 32
ARM repeat Subdomain of clathrin and coatomer appendage domain 33
CRAL/TRIO N-terminal domain Supernatant protein factor (SPF), C-terminal domain 32
PA domain Zn-dependent exopeptidases 31
Glycoside hydrolase/deacetylase Galactose mutarotase-like 32
UBC-like RING/U-box 33
Aldolase NAD(P)-binding Rossmann-fold domains 32
Fe,Mn superoxide dismutase (SOD), N-terminal domain Fe,Mn superoxide dismutase (SOD), C-terminal domain 33
DNA repair protein MutS, domain I DNA repair protein MutS, domain II 32
RING/U-box BRCT domain 33
Cullin repeat-like "Winged helix" DNA-binding domain 32
Glycoside hydrolase/deacetylase Families 57/38 glycoside transferase middle domain 32
TPR-like CAD & PB1 domains 31
ATP-dependent DNA ligase DNA-binding domain DNA ligase/mRNA capping enzyme, catalytic domain 33
Ribosomal protein L6 Ribosomal protein L6 32
UBA-like RING/U-box 33
TAZ domain FYVE/PHD zinc finger 33
P-loop containing nucleoside triphosphate hydrolases HRDC-like 33
beta-N-acetylhexosaminidase-like domain (Trans)glycosidases 32
POZ domain Ankyrin repeat 32
F1F0 ATP synthase subunit C F1F0 ATP synthase subunit C 31
POZ domain TAZ domain 32
Translation proteins ThrRS/AlaRS common domain 33
Nucleotidylyl transferase Nucleotidylyl transferase 31
P-loop containing nucleoside triphosphate hydrolases Hypothetical protein YjiA, C-terminal domain 31
ClpP/crotonase NAD(P)-binding Rossmann-fold domains 31
PH domain-like WD40 repeat-like 33
Translation proteins SH3-like domain Translation proteins SH3-like domain 33
CRAL/TRIO domain Supernatant protein factor (SPF), C-terminal domain 32
NTF2-like RNA-binding domain, RBD 31
Zn-dependent exopeptidases Transferrin receptor-like dimerisation domain 31
Actin depolymerizing proteins VHP, Villin headpiece domain 32
Periplasmic binding protein-like I Voltage-gated potassium channels 33
ARM repeat PH domain-like 33
RNA-binding domain, RBD PABC (PABP) domain 31
Cullin repeat-like Cullin homology domain 32
GAF domain-like GAF domain-like 33
ADC-like Cdc48 domain 2-like 32
PA domain Transferrin receptor-like dimerisation domain 31
Protein kinase-like (PK-like) Protein kinase-like (PK-like) 33
Calponin-homology domain, CH-domain P-loop containing nucleoside triphosphate hydrolases 31
Domain of poly(ADP-ribose) polymerase ADP-ribosylation 32
Fe-S cluster assembly (FSCA) domain-like Fe-S cluster assembly (FSCA) domain-like 32
Actin depolymerizing proteins Actin depolymerizing proteins 32
PUA domain-like Nucleotidylyl transferase 32
beta-Galactosidase/glucuronidase domain (Trans)glycosidases 33
NAD(P)-binding Rossmann-fold domains ACT-like 33
BEACH domain ARM repeat 33
UBC-like Endosomal sorting complex assembly domain 31
dsRNA-binding domain-like Ribosomal protein S5 domain 2-like 31
DNA repair protein MutS, domain II DNA repair protein MutS, domain III 32
Ubiquitin-like BAG domain 31
ClpP/crotonase 6-phosphogluconate dehydrogenase C-terminal domain-like 31
Sec63 N-terminal domain-like E set domains 33
DNA repair protein MutS, domain II P-loop containing nucleoside triphosphate hydrolases 32
Protein kinase-like (PK-like) PP2C-like 33
ARM repeat C2 domain (Calcium/lipid-binding domain, CaLB) 33
ATP-dependent DNA ligase DNA-binding domain Nucleic acid-binding proteins 33
PYP-like sensor domain (PAS domain) ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 33
FYVE/PHD zinc finger Chromo domain-like 33
Nucleotidyltransferase Poly A polymerase C-terminal region-like 31
Ankyrin repeat Ankyrin repeat 32
DNA repair protein MutS, domain I DNA repair protein MutS, domain III 32
WGR domain-like Domain of poly(ADP-ribose) polymerase 32
N-terminal nucleophile aminohydrolases (Ntn hydrolases) Adenine nucleotide alpha hydrolases-like 32
POZ domain POZ domain 33
Sec63 N-terminal domain-like Sec63 N-terminal domain-like 33
Translation proteins Translation proteins 32
Clathrin adaptor appendage domain Subdomain of clathrin and coatomer appendage domain 33
Acyl-CoA dehydrogenase C-terminal domain-like Acyl-CoA dehydrogenase C-terminal domain-like 32
GroEL apical domain-like SAICAR synthase-like 32
Tudor/PWWP/MBT P-loop containing nucleoside triphosphate hydrolases 22
SNARE-like P-loop containing nucleoside triphosphate hydrolases 21
Trypsin-like serine proteases Trypsin-like serine proteases 22
ARM repeat POZ domain 22
POZ domain TPR-like 21
PH domain-like Ankyrin repeat 22
Chaperone J-domain Thioredoxin-like 22
Amine oxidase N-terminal region Amine oxidase catalytic domain 21
AN1-like Zinc finger AN1-like Zinc finger 22
FYVE/PHD zinc finger GroEL apical domain-like 21
Cysteine proteinases UBA-like 22
N-terminal, heterodimerisation domain of RBP7 (RpoE) Nucleic acid-binding proteins 21
Hypothetical protein c14orf129, hspc210 TPR-like 21
GroEL equatorial domain-like GroEL equatorial domain-like 22
BAR/IMD domain-like Ankyrin repeat 22
Nucleic acid-binding proteins "Winged helix" DNA-binding domain 21
Galactose-binding domain-like beta-Galactosidase/glucuronidase domain 22
Galactose-binding domain-like Galactose mutarotase-like 22
S-adenosylmethionine synthetase S-adenosylmethionine synthetase 21
P-loop containing nucleoside triphosphate hydrolases Homeodomain-like 22
Ubiquitin-like PUG domain-like 22
TPR-like RING/U-box 22
Chaperone J-domain 4Fe-4S ferredoxins 22
TATA-box binding protein-like TATA-box binding protein-like 21
Translation initiation factor 2 beta, aIF2beta, N-terminal domain ARM repeat 21
SAP domain WGR domain-like 21
Nitrite/Sulfite reductase N-terminal domain-like Nitrite/Sulfite reductase N-terminal domain-like 21
Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 22
SBT domain Ankyrin repeat 21
Ribosomal L27 protein-like Eukaryotic type KH-domain (KH-domain type I) 21
EF-hand Mitochondrial carrier 22
Myosin rod fragments Smc hinge domain 22
Ubiquitin-like Homeodomain-like 21
HIT/MYND zinc finger-like Cysteine proteinases 21
Ran binding protein zinc finger-like RNA-binding domain, RBD 22
Folate-binding domain Aminomethyltransferase beta-barrel domain 21
Dimeric alpha+beta barrel Dimeric alpha+beta barrel 22
Nqo1 FMN-binding domain-like Nqo1 middle domain-like 21
Nucleotidyltransferase PAP/Archaeal CCA-adding enzyme, C-terminal domain 21
Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain 21
Nucleotidylyl transferase Ribosomal protein L25-like 22
Acid proteases Saposin 21
C2 domain (Calcium/lipid-binding domain, CaLB) Formin homology 2 domain (FH2 domain) 21
Chromo domain-like S-adenosyl-L-methionine-dependent methyltransferases 21
beta-Galactosidase/glucuronidase domain beta-Galactosidase/glucuronidase domain 22
Amidase signature (AS) enzymes TPR-like 21
Kelch motif Metallo-dependent phosphatases 22
PLP-dependent transferases PLP-dependent transferases 22
Clavaminate synthase-like Clavaminate synthase-like 21
tRNA-binding arm Class II aaRS and biotin synthetases 22
PH domain-like ArfGap/RecO-like zinc finger 22
Aminopeptidase/glucanase lid domain Zn-dependent exopeptidases 21
PUA domain-like Ribosomal protein S5 domain 2-like 22
Alpha-L RNA-binding motif Pseudouridine synthase 22
SAP domain Domain of poly(ADP-ribose) polymerase 21
RuBisCO, large subunit, small (N-terminal) domain RuBisCo, C-terminal domain 21
NAD(P)-binding Rossmann-fold domains NAD(P)-binding Rossmann-fold domains 22
F-box domain L domain-like 22
Cysteine proteinases Ubiquitin-like 22
PLC-like phosphodiesterases C2 domain (Calcium/lipid-binding domain, CaLB) 21
LysM domain LysM domain 21
Restriction endonuclease-like RuvA domain 2-like 22
P-loop containing nucleoside triphosphate hydrolases Helical scaffold and wing domains of SecA 21
FYVE/PHD zinc finger SAICAR synthase-like 21
PH domain-like Bet v1-like 22
(Phosphotyrosine protein) phosphatases II Formin homology 2 domain (FH2 domain) 21
PGBD-like Metalloproteases ("zincins"), catalytic domain 21
FAD/NAD(P)-binding domain EF-hand 21
L9 N-domain-like Ribosomal protein L9 C-domain 22
Glutathione synthetase ATP-binding domain-like Phosphoenolpyruvate/pyruvate domain 22
UBA-like Thioredoxin-like 21
Adenine nucleotide alpha hydrolases-like RING/U-box 21
Galactose-binding domain-like NAD(P)-binding Rossmann-fold domains 22
RNA-binding domain, RBD RING/U-box 22
POZ domain Skp1 dimerisation domain-like 22
Dom34/Pelota N-terminal domain-like L30e-like 21
FMN-linked oxidoreductases Alpha subunit of glutamate synthase, C-terminal domain 22
N-terminal nucleophile aminohydrolases (Ntn hydrolases) Alpha subunit of glutamate synthase, C-terminal domain 22
2Fe-2S ferredoxin-like alpha-helical ferredoxin 21
P-loop containing nucleoside triphosphate hydrolases Initiation factor IF2/eIF5b, domain 3 21
P-loop containing nucleoside triphosphate hydrolases CYTH-like phosphatases 22
Nitrite/Sulfite reductase N-terminal domain-like Nitrite and sulphite reductase 4Fe-4S domain-like 21
Class II aaRS and biotin synthetases Translation proteins 22
GYF domain SET domain 22
E set domains E set domains 22
Zinc-binding domain of translation initiation factor 2 beta ARM repeat 21
GAF domain-like CheY-like 21
Rap30/74 interaction domains "Winged helix" DNA-binding domain 22
LysM domain Protein kinase-like (PK-like) 21
Nqo1 FMN-binding domain-like Nqo1C-terminal domain-like 21
P-loop containing nucleoside triphosphate hydrolases Retrovirus zinc finger-like domains 22
RING/U-box Retrovirus zinc finger-like domains 22
PX domain BAR/IMD domain-like 22
Nqo1 middle domain-like Nqo1C-terminal domain-like 21
DEK C-terminal domain SWIB/MDM2 domain 22
Ribonuclease PH domain 2-like Eukaryotic type KH-domain (KH-domain type I) 22
ARM repeat Tudor/PWWP/MBT 21
Class II aaRS and biotin synthetases C-terminal domain of ProRS 22
PreATP-grasp domain Single hybrid motif 22
PreATP-grasp domain PreATP-grasp domain 22
SMAD/FHA domain Phospholipase D/nuclease 22
Cystatin/monellin Cystatin/monellin 21
Arabinanase/levansucrase/invertase Nucleotide-diphospho-sugar transferases 21
ArfGap/RecO-like zinc finger C2 domain (Calcium/lipid-binding domain, CaLB) 22
Aconitase iron-sulfur domain LeuD/IlvD-like 22
P-loop containing nucleoside triphosphate hydrolases Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain 22
BRCT domain FYVE/PHD zinc finger 22
N-terminal nucleophile aminohydrolases (Ntn hydrolases) FMN-linked oxidoreductases 22
EF-hand PLC-like phosphodiesterases 21
SNARE-like Domain of the SRP/SRP receptor G-proteins 21
"Winged helix" DNA-binding domain Sec63 N-terminal domain-like 22
R1 subunit of ribonucleotide reductase, N-terminal domain PFL-like glycyl radical enzymes 21
Homeodomain-like RING/U-box 22
Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) ThrRS/AlaRS common domain 22
Six-hairpin glycosidases AbfB domain 21
BAR/IMD domain-like ArfGap/RecO-like zinc finger 22
Nucleic acid-binding proteins Ribonuclease H-like 22
PRTase-like PRTase-like 22
ThrRS/AlaRS common domain Class II aaRS ABD-related 22
LEA14-like LEA14-like 21
Ubiquitin-like XPC-binding domain 22
Rudiment single hybrid motif Single hybrid motif 22
SWIB/MDM2 domain Plus3-like 22
Amine oxidase N-terminal region Amine oxidase N-terminal region 21
CCCH zinc finger Eukaryotic type KH-domain (KH-domain type I) 22
t-snare proteins SNARE fusion complex 22
Cytochrome P450 Cytochrome P450 22
E set domains AMPKBI-like 21
Glutathione synthetase ATP-binding domain-like Glutathione synthetase ATP-binding domain-like 22
Glutathione synthetase ATP-binding domain-like Single hybrid motif 22
Thioredoxin-like "Winged helix" DNA-binding domain 21
Pre-protein crosslinking domain of SecA Helical scaffold and wing domains of SecA 21
ISP transmembrane anchor ISP domain 21
Ribosomal protein S5 domain 2-like Type II DNA topoisomerase 22
Nitrite and sulphite reductase 4Fe-4S domain-like Nitrite and sulphite reductase 4Fe-4S domain-like 21
Insert subdomain of RNA polymerase alpha subunit RBP11-like subunits of RNA polymerase 21
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase Type II DNA topoisomerase 22
L domain-like Outer arm dynein light chain 1 22
N-terminal domain of eukaryotic peptide chain release factor subunit 1, ERF1 L30e-like 21
CBS-domain pair CAD & PB1 domains 22
Soluble quinoprotein glucose dehydrogenase WD40 repeat-like 22
Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain 21
EF-hand P-loop containing nucleoside triphosphate hydrolases 22
Class II aaRS and biotin synthetases Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) 22
Ribonuclease H-like RING/U-box 22
Voltage-gated potassium channels NAD(P)-binding Rossmann-fold domains 21
Methionyl-tRNA synthetase (MetRS), Zn-domain Nucleotidylyl transferase 22
Domain of the SRP/SRP receptor G-proteins Signal peptide-binding domain 21
beta-beta-alpha zinc fingers Ribonuclease H-like 22
YrdC/RibB RibA-like 22
F-box domain HCP-like 22
Ribonuclease H-like HRDC-like 22
Concanavalin A-like lectins/glucanases BEACH domain 22
Acetyl-CoA synthetase-like ACP-like 22
vWA-like SPOC domain-like 22
BAR/IMD domain-like PH domain-like 22
Prokaryotic type KH domain (KH-domain type II) Ribosomal protein S3 C-terminal domain 21
PLC-like phosphodiesterases PLC-like phosphodiesterases 21
PUA domain-like P-loop containing nucleoside triphosphate hydrolases 22
CheY-like CheY-like 22
Oxidoreductase molybdopterin-binding domain E set domains 22
6-phosphogluconate dehydrogenase C-terminal domain-like UDP-glucose/GDP-mannose dehydrogenase C-terminal domain 22
ARID-like FYVE/PHD zinc finger 22
Class II aaRS ABD-related C-terminal domain of ProRS 22
Concanavalin A-like lectins/glucanases P-loop containing nucleoside triphosphate hydrolases 22
ACT-like Protein kinase-like (PK-like) 21
P-loop containing nucleoside triphosphate hydrolases Myosin rod fragments 22
DNA clamp DNA clamp 21
Rad51 N-terminal domain-like P-loop containing nucleoside triphosphate hydrolases 21
Elongation factor Ts (EF-Ts), dimerisation domain Elongation factor Ts (EF-Ts), dimerisation domain 22
ARM repeat UBA-like 22
Ribosomal L27 protein-like Nucleic acid-binding proteins 21
Ribonuclease PH domain 2-like Nucleic acid-binding proteins 22
Metalloproteases ("zincins"), catalytic domain HAD-like 22
PAP/OAS1 substrate-binding domain PAP/Archaeal CCA-adding enzyme, C-terminal domain 21
RING/U-box PUA domain-like 22
Ribosomal protein S5 domain 2-like Eukaryotic type KH-domain (KH-domain type I) 22
Acyl-CoA N-acyltransferases (Nat) Acyl-CoA N-acyltransferases (Nat) 21
PH domain-like GTPase activation domain, GAP 21
HAD-like Glycerol-3-phosphate (1)-acyltransferase 21
PA domain RING/U-box 22
Saposin Saposin 22
UROD/MetE-like UROD/MetE-like 22
NAD(P)-binding Rossmann-fold domains Serine metabolism enzymes domain 22
Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) Translation proteins 22
UDP-Glycosyltransferase/glycogen phosphorylase UDP-Glycosyltransferase/glycogen phosphorylase 21
P-loop containing nucleoside triphosphate hydrolases Prokaryotic type KH domain (KH-domain type II) 22
RNA-binding domain, RBD Ribonuclease H-like 22
NAD(P)-binding Rossmann-fold domains Glutamyl tRNA-reductase dimerization domain 22
Serine metabolism enzymes domain ACT-like 22
Concanavalin A-like lectins/glucanases WD40 repeat-like 22
Translation initiation factor IF3, N-terminal domain Translation initiation factor IF3, C-terminal domain 22
RNA-binding domain, RBD DPP6 N-terminal domain-like 22
UBA-like Elongation factor Ts (EF-Ts), dimerisation domain 22
Quinoprotein alcohol dehydrogenase-like Quinoprotein alcohol dehydrogenase-like 22
Protease propeptides/inhibitors Subtilisin-like 22
Surp module (SWAP domain) Surp module (SWAP domain) 22
CCCH zinc finger RING/U-box 22
Dihydrofolate reductase-like YbiA-like 22
PriA/YqbF domain GINS helical bundle-like 22
F-box domain Clavaminate synthase-like 22
Starch-binding domain-like Galactose-binding domain-like 22
Clavaminate synthase-like beta-beta-alpha zinc fingers 22
P-loop containing nucleoside triphosphate hydrolases Pre-protein crosslinking domain of SecA 21
WW domain FF domain 22
Class I glutamine amidotransferase-like Adenine nucleotide alpha hydrolases-like 22
Ribonuclease PH domain 2-like Ribonuclease PH domain 2-like 22
Eukaryotic type KH-domain (KH-domain type I) RNA-binding domain, RBD 22
(Phosphotyrosine protein) phosphatases II E set domains 22
Calponin-homology domain, CH-domain EB1 dimerisation domain-like 22
PUA domain-like S-adenosyl-L-methionine-dependent methyltransferases 21
SAP domain ADP-ribosylation 21
Creatinase/aminopeptidase "Winged helix" DNA-binding domain 22
Dom34/Pelota N-terminal domain-like Translational machinery components 21
SWIB/MDM2 domain SWIB/MDM2 domain 22
Tetrahydrobiopterin biosynthesis enzymes-like Tetrahydrobiopterin biosynthesis enzymes-like 22
PYP-like sensor domain (PAS domain) F-box domain 22
Ribosomal protein S5 domain 2-like Nucleic acid-binding proteins 22
4Fe-4S ferredoxins P-loop containing nucleoside triphosphate hydrolases 21
FAD/NAD(P)-binding domain Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain 21
P-loop containing nucleoside triphosphate hydrolases Bromodomain 22
PurM N-terminal domain-like PurM C-terminal domain-like 22
FAD/NAD(P)-binding domain Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain 21
POZ domain WD40 repeat-like 22
Concanavalin A-like lectins/glucanases Concanavalin A-like lectins/glucanases 21
ArfGap/RecO-like zinc finger Ankyrin repeat 22
UBA-like P-loop containing nucleoside triphosphate hydrolases 22
SAP domain SAP domain 21
P-loop containing nucleoside triphosphate hydrolases Class I glutamine amidotransferase-like 22
P-loop containing nucleoside triphosphate hydrolases RecA protein, C-terminal domain 22
Homeodomain-like "Winged helix" DNA-binding domain 22
Kelch motif Kelch motif 22
(Trans)glycosidases Chitinase insertion domain 21
Carbamate kinase-like ACT-like 22
UBA-like Hect, E3 ligase catalytic domain 22
ARM repeat Concanavalin A-like lectins/glucanases 22
Concanavalin A-like lectins/glucanases PH domain-like 22
4'-phosphopantetheinyl transferase 4'-phosphopantetheinyl transferase 21
P-loop containing nucleoside triphosphate hydrolases Macro domain-like 22
UBA-like XPC-binding domain 22
Putative DNA-binding domain Putative DNA-binding domain 11
Nucleic acid-binding proteins S-adenosyl-L-methionine-dependent methyltransferases 11
AraD/HMP-PK domain-like HAD-like 11
Cysteine proteinases Sec-C motif 11
GroES-like UDP-Glycosyltransferase/glycogen phosphorylase 11
Macro domain-like CRAL/TRIO domain 11
HD-domain/PDEase-like TGS-like 11
P-loop containing nucleoside triphosphate hydrolases Thioredoxin-like 11
BRCT domain P-loop containing nucleoside triphosphate hydrolases 11
NusB-like S-adenosyl-L-methionine-dependent methyltransferases 11
Sec63 N-terminal domain-like DNA/RNA polymerases 11
Eukaryotic type KH-domain (KH-domain type I) Retrovirus zinc finger-like domains 11
Actin-like ATPase domain HD-domain/PDEase-like 11
cAMP-binding domain-like Protein kinase-like (PK-like) 11
Flavoproteins Ferredoxin reductase-like, C-terminal NADP-linked domain 11
Galactose oxidase, central domain Galactose oxidase, central domain 11
UBA-like post-AAA+ oligomerization domain-like 11
Chaperone J-domain Homeodomain-like 11
ISP domain Chlorophyll a-b binding protein 11
Hypothetical protein PA1324 Starch-binding domain-like 11
alpha/beta knot Nucleic acid-binding proteins 11
TPR-like Cysteine proteinases 11
Phosphoglycerate kinase S-adenosyl-L-methionine-dependent methyltransferases 11
FAD-linked reductases, C-terminal domain 4Fe-4S ferredoxins 11
FGAM synthase PurL, linker domain Class I glutamine amidotransferase-like 11
Metallo-dependent hydrolases Glutamine synthetase, N-terminal domain 11
E set domains RNA-binding domain, RBD 11
DNA ligase/mRNA capping enzyme, catalytic domain BRCT domain 11
HisI-like all-alpha NTP pyrophosphatases 11
HAND domain of the nucleosome remodeling ATPase ISWI Homeodomain-like 11
Mannose 6-phosphate receptor domain ARM repeat 11
BRCT domain Domain of poly(ADP-ribose) polymerase 11
Thioredoxin-like ERP29 C domain-like 11
BRCT domain PsbU/PolX domain-like 11
HydA/Nqo6-like Nqo5-like 11
Glutathione synthetase ATP-binding domain-like PK beta-barrel domain-like 11
Oxygen-evolving enhancer protein 3, Cyclophilin-like 11
WD40 repeat-like DPP6 N-terminal domain-like 11
Enolase C-terminal domain-like alpha/beta-Hydrolases 11
TRAF domain-like TRAF domain-like 11
CAD & PB1 domains RING/U-box 11
Thioredoxin-like Six-hairpin glycosidases 11
PDZ domain-like (Phosphotyrosine protein) phosphatases II 11
beta and beta-prime subunits of DNA dependent RNA-polymerase Ribosomal protein S2 11
L domain-like ARM repeat 11
ATP-dependent DNA ligase DNA-binding domain BRCT domain 11
P-loop containing nucleoside triphosphate hydrolases Prismane protein-like 11
Chaperone J-domain RNA-binding domain, RBD 11
Staphylococcal nuclease Tudor/PWWP/MBT 11
SMAD/FHA domain P-loop containing nucleoside triphosphate hydrolases 11
P-loop containing nucleoside triphosphate hydrolases vWA-like 11
Cytochrome f, large domain Cytochrome f subunit of the cytochrome b6f complex, transmembrane anchor 11
Class I glutamine amidotransferase-like GMP synthetase C-terminal dimerisation domain 11
FabD/lysophospholipase-like Probable ACP-binding domain of malonyl-CoA ACP transacylase 11
Formate/glycerate dehydrogenase catalytic domain-like ACT-like 11
Cyclophilin-like RNA-binding domain, RBD 11
FYVE/PHD zinc finger Clavaminate synthase-like 11
RuvA domain 2-like RuvA domain 2-like 11
F-box domain Actin-like ATPase domain 11
Acetyl-CoA synthetase-like Heme-dependent catalase-like 11
Translation proteins PRC-barrel domain 11
UBA-like PUG domain-like 11
Histone-fold ARM repeat 11
Glutathione synthetase ATP-binding domain-like Phosphoglycerate mutase-like 11
FMN-linked oxidoreductases FAD/NAD(P)-binding domain 11
CCCH zinc finger S-adenosyl-L-methionine-dependent methyltransferases 11
Thioredoxin-like VC0467-like 11
DPP6 N-terminal domain-like DPP6 N-terminal domain-like 11
PYP-like sensor domain (PAS domain) Galactose oxidase, central domain 11
PreATP-grasp domain Carbamoyl phosphate synthetase, large subunit connection domain 11
Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain Nucleotidylyl transferase 11
Carbamate kinase-like Carbamate kinase-like 11
HAD-like NHL repeat 11
Tudor/PWWP/MBT DNA repair protein MutS, domain II 11
GST C-terminal domain-like Ribosomal protein L25-like 11
ARID-like HSP20-like chaperones 11
MOSC N-terminal domain-like PK beta-barrel domain-like 11
RuvA domain 2-like Nucleic acid-binding proteins 11
Starch-binding domain-like Nucleic acid-binding proteins 11
SPOC domain-like SAP domain 11
2Fe-2S ferredoxin-like 4Fe-4S ferredoxins 11
Ubiquitin-like TPR-like 11
P-loop containing nucleoside triphosphate hydrolases Ribosomal L11/L12e N-terminal domain 11
PP2C-like cAMP-binding domain-like 11
PreATP-grasp domain N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE) 11
HD-domain/PDEase-like ACT-like 11
BRCT domain DNA/RNA polymerases 11
cAMP-binding domain-like cAMP-binding domain-like 11
P-loop containing nucleoside triphosphate hydrolases PLP-dependent transferases 11
PsbU/PolX domain-like Nucleotidyltransferase 11
Acid proteases DNA/RNA polymerases 11
Nucleic acid-binding proteins GAD domain-like 11
Galactose mutarotase-like Starch-binding domain-like 11
TPR-like HSP20-like chaperones 11
Cytidine deaminase-like YbiA-like 11
FYVE/PHD zinc finger Bromodomain 11
ARM repeat SH3-domain 11
SWIB/MDM2 domain CCCH zinc finger 11
ACT-like Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 11
beta-Galactosidase/glucuronidase domain Galactose mutarotase-like 11
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 11
Trigger factor ribosome-binding domain FKBP-like 11
Starch-binding domain-like Starch-binding domain-like 11
vWA-like Cysteine-rich domain 11
Class I glutamine amidotransferase-like Ribulose-phoshate binding barrel 11
Chaperone J-domain Sec63 N-terminal domain-like 11
Acid proteases UBA-like 11
PLP-dependent transferases MOSC N-terminal domain-like 11
Surp module (SWAP domain) Ubiquitin-like 11
GYF domain CCCH zinc finger 11
Dcp2 domain-like Nudix 11
PIN domain-like PLP-dependent transferases 11
Cytidine deaminase-like Dihydrofolate reductase-like 11
Glutathione synthetase ATP-binding domain-like PK C-terminal domain-like 11
CarD-like TRCF domain-like 11
Tryptophan synthase beta subunit-like PLP-dependent enzymes ACT-like 11
PDZ domain-like Rubredoxin-like 11
PurS-like FGAM synthase PurL, linker domain 11
Starch-binding domain-like Phosphoglycerate mutase-like 11
Urease, gamma-subunit Composite domain of metallo-dependent hydrolases 11
RING/U-box Cyclophilin-like 11
S13-like H2TH domain Ribosomal protein S5 domain 2-like 11
Ubiquitin-like Cap-Gly domain 11
Class I glutamine amidotransferase-like ADC synthase 11
RNA-binding domain, RBD HCP-like 11
Concanavalin A-like lectins/glucanases SH2 domain 11
CCCH zinc finger WD40 repeat-like 11
Nucleotide-diphospho-sugar transferases ARM repeat 11
L-aspartase-like Class II aaRS and biotin synthetases 11
alpha-D-mannose-specific plant lectins Hairpin loop containing domain-like 11
CorA soluble domain-like Magnesium transport protein CorA, transmembrane region 11
GST C-terminal domain-like eEF1-gamma domain 11
Chaperone J-domain CSL zinc finger 11
ARID-like Clavaminate synthase-like 11
Heme oxygenase-like HAD-like 11
Trimeric LpxA-like enzymes GHMP Kinase, C-terminal domain 11
S15/NS1 RNA-binding domain Class II aaRS ABD-related 11
Nicotinate/Quinolinate PRTase N-terminal domain-like Nicotinate/Quinolinate PRTase C-terminal domain-like 11
Metallo-hydrolase/oxidoreductase Metallo-hydrolase/oxidoreductase 11
Protein prenylyltransferase L domain-like 11
Cupredoxins FtsH protease domain-like 11
RNA-binding domain, RBD PWI domain 11
PIN domain-like P-loop containing nucleoside triphosphate hydrolases 11
UBA-like NSFL1 (p97 ATPase) cofactor p47, SEP domain 11
DNA primase core P-loop containing nucleoside triphosphate hydrolases 11
Carbamate kinase-like Acyl-CoA N-acyltransferases (Nat) 11
Leukotriene A4 hydrolase N-terminal domain ARM repeat 11
PurM N-terminal domain-like Class I glutamine amidotransferase-like 11
PYP-like sensor domain (PAS domain) Kelch motif 11
Fucose-specific lectin Fucose-specific lectin 11
2,3-Bisphosphoglycerate-independent phosphoglycerate mutase, substrate-binding domain Alkaline phosphatase-like 11
PH domain-like BSD domain-like 11
Diaminopimelate epimerase-like Diaminopimelate epimerase-like 11
Starch-binding domain-like Glutathione synthetase ATP-binding domain-like 11
Carbon-nitrogen hydrolase Adenine nucleotide alpha hydrolases-like 11
FYVE/PHD zinc finger SWIB/MDM2 domain 11
GST C-terminal domain-like eEF-1beta-like 11
P-loop containing nucleoside triphosphate hydrolases Formin homology 2 domain (FH2 domain) 11
Tex N-terminal region-like Ribonuclease H-like 11
(Phosphotyrosine protein) phosphatases II NAD kinase/diacylglycerol kinase-like 11
Hairpin loop containing domain-like Protein kinase-like (PK-like) 11
Carbamate kinase-like ALDH-like 11
P-loop containing nucleoside triphosphate hydrolases Glucocorticoid receptor-like (DNA-binding domain) 11
YgbK-like Aldolase 11
SMAD/FHA domain PP2C-like 11
SWIB/MDM2 domain GYF domain 11
PUA domain-like alpha/beta knot 11
ENT-like Tudor/PWWP/MBT 11
Nucleotidylyl transferase Alpha-L RNA-binding motif 11
YjeF N-terminal domain-like FMN-binding split barrel 11
F-box domain ApaG-like 11
Dihydrofolate reductase-like Thymidylate synthase/dCMP hydroxymethylase 11
P-loop containing nucleoside triphosphate hydrolases TPR-like 11
Ribose/Galactose isomerase RpiB/AlsB RmlC-like cupins 11
Thiamin pyrophosphokinase, catalytic domain Thiamin pyrophosphokinase, substrate-binding domain 11
Oxidoreductase molybdopterin-binding domain Ferredoxin reductase-like, C-terminal NADP-linked domain 11
NAD-binding domain of HMG-CoA reductase Substrate-binding domain of HMG-CoA reductase 11
Chaperone J-domain FAD/NAD(P)-binding domain 11
SAP domain DNase I-like 11
Tubulin nucleotide-binding domain-like Protein kinase-like (PK-like) 11
Concanavalin A-like lectins/glucanases Cysteine proteinases 11
Tex N-terminal region-like Nucleic acid-binding proteins 11
alpha-helical ferredoxin FAD/NAD(P)-binding domain 11
FYVE/PHD zinc finger Plus3-like 11
Chaperone J-domain ARM repeat 11
Hypothetical protein PA1324 Cna protein B-type domain 11
Nucleotidylyl transferase tRNA-binding arm 11
C2 domain (Calcium/lipid-binding domain, CaLB) alpha/beta-Hydrolases 11
P-loop containing nucleoside triphosphate hydrolases D-aminoacid aminotransferase-like PLP-dependent enzymes 11
WD40 repeat-like Cyclophilin-like 11
PDZ domain-like E set domains 11
TGS-like Class II aaRS and biotin synthetases 11
ACP-like Heme-dependent catalase-like 11
Ribosomal protein S5 domain 2-like DNA mismatch repair protein MutL 11
R3H domain P-loop containing nucleoside triphosphate hydrolases 11
Flavoproteins Radical SAM enzymes 11
Tudor/PWWP/MBT DNA repair protein MutS, domain III 11
F-box domain P-loop containing nucleoside triphosphate hydrolases 11
Ribonuclease H-like Eukaryotic type KH-domain (KH-domain type I) 11
L domain-like FabD/lysophospholipase-like 11
TATA-box binding protein-like DNA-glycosylase 11
SET domain SET domain 11
CarD-like P-loop containing nucleoside triphosphate hydrolases 11
L30e-like alpha/beta knot 11
TGS-like ACT-like 11
GYF domain RNA-binding domain, RBD 11
Arabinanase/levansucrase/invertase Arabinanase/levansucrase/invertase 11
DNA polymerase beta, N-terminal domain-like PsbU/PolX domain-like 11
Protein kinase-like (PK-like) UBA-like 11
Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 1-deoxy-D-xylulose-5-phosphate reductoisomerase, C-terminal domain 11
(Phosphotyrosine protein) phosphatases II Actin depolymerizing proteins 11
SufE/NifU BolA-like 11
HMG-box HMG-box 11
SWIB/MDM2 domain eIF1-like 11
Cap-Gly domain L domain-like 11
Second domain of FERM PH domain-like 11
HCP-like HIT/MYND zinc finger-like 11
Glucocorticoid receptor-like (DNA-binding domain) HAD-like 11
DEK C-terminal domain ssDNA-binding transcriptional regulator domain 11
P-loop containing nucleoside triphosphate hydrolases TRCF domain-like 11
Protein kinase-like (PK-like) Acyl-CoA dehydrogenase C-terminal domain-like 11
E set domains Ferredoxin reductase-like, C-terminal NADP-linked domain 11
GST C-terminal domain-like Nucleic acid-binding proteins 11
Flavoproteins Riboflavin synthase domain-like 11
DHS-like NAD/FAD-binding domain alpha/beta-Hydrolases 11
SMAD/FHA domain PIN domain-like 11
PUA domain-like eIF1-like 11
HD-domain/PDEase-like EF-hand 11
Cytochrome b5-like heme/steroid binding domain Ferredoxin reductase-like, C-terminal NADP-linked domain 11
Adenine nucleotide alpha hydrolases-like Molybdenum cofactor biosynthesis proteins 11
PurM C-terminal domain-like Class I glutamine amidotransferase-like 11
Starch-binding domain-like Carboxypeptidase regulatory domain-like 11
Mechanosensitive channel protein MscS (YggB), transmembrane region Sm-like ribonucleoproteins 11
CoA-dependent acyltransferases CoA-dependent acyltransferases 11
Tubulin nucleotide-binding domain-like Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain 11
Formate/glycerate dehydrogenase catalytic domain-like Serine metabolism enzymes domain 11
ACP-like Quinoprotein alcohol dehydrogenase-like 11
FKBP-like Rhodanese/Cell cycle control phosphatase 11
FMN-dependent nitroreductase-like FMN-dependent nitroreductase-like 11
Alpha subunit of glutamate synthase, C-terminal domain alpha-helical ferredoxin 11
Rhodanese/Cell cycle control phosphatase alpha/beta-Hydrolases 11
Cytochrome c Cytochrome c1 subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase), transmembrane anchor 11
Nucleic acid-binding proteins SH2 domain 11
Glutathione synthetase ATP-binding domain-like N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE) 11
Clavaminate synthase-like Protein kinase-like (PK-like) 11
Protein kinase-like (PK-like) KA1-like 11
Thioredoxin-like FAD-dependent thiol oxidase 11
HMA, heavy metal-associated domain Metal cation-transporting ATPase, ATP-binding domain N 11
F-box domain Protein kinase-like (PK-like) 11
P-loop containing nucleoside triphosphate hydrolases (Trans)glycosidases 11
Acyl-CoA N-acyltransferases (Nat) Bromodomain 11
Enolase N-terminal domain-like alpha/beta-Hydrolases 11
Formate/glycerate dehydrogenase catalytic domain-like Formate/glycerate dehydrogenase catalytic domain-like 11
MHC antigen-recognition domain Protein kinase-like (PK-like) 11
C-terminal, gelsolin-like domain of Sec23/24 VHP, Villin headpiece domain 11
Rhodanese/Cell cycle control phosphatase Rhodanese/Cell cycle control phosphatase 11
Zinc beta-ribbon Zinc beta-ribbon 11
CAD & PB1 domains UBA-like 11
P-loop containing nucleoside triphosphate hydrolases HIT-like 11
Ubiquitin-like L domain-like 11
Molybdenum cofactor biosynthesis proteins MoeA C-terminal domain-like 11
N-utilization substance G protein NusG, N-terminal domain Translation proteins SH3-like domain 11
FYVE/PHD zinc finger Retrovirus zinc finger-like domains 11
Nucleic acid-binding proteins TPR-like 11
Cytochrome f, large domain Rudiment single hybrid motif 11
Composite domain of metallo-dependent hydrolases Composite domain of metallo-dependent hydrolases 11
Calcyclin-binding protein-like HSP20-like chaperones 11
Chelatase Chlorophyll a-b binding protein 11
Tex N-terminal region-like SH2 domain 11
Tex N-terminal region-like RuvA domain 2-like 11
Bactericidal permeability-increasing protein, BPI Bactericidal permeability-increasing protein, BPI 11
FAD/NAD(P)-binding domain ACP-like 11
Tudor/PWWP/MBT Chromo domain-like 11
Thiamin diphosphate-binding fold (THDP-binding) alpha/beta-Hydrolases 11
ACT-like Formyltransferase 11
NAD(P)-binding Rossmann-fold domains Succinyl-CoA synthetase domains 11
ValRS/IleRS/LeuRS editing domain tRNA-binding arm 11
Pseudouridine synthase Pseudouridine synthase 11
TAF(II)230 TBP-binding fragment Bromodomain 11
(Phosphotyrosine protein) phosphatases II DNA ligase/mRNA capping enzyme, catalytic domain 11
Ubiquitin-like Hect, E3 ligase catalytic domain 11
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase DNA mismatch repair protein MutL 11
FAD/NAD(P)-binding domain NAD(P)-binding Rossmann-fold domains 11
Ankyrin repeat TPR-like 11
TAZ domain TAZ domain 11
6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase, HPPK Dihydropteroate synthetase-like 11
RuvA domain 2-like SH2 domain 11
Ankyrin repeat CCCH zinc finger 11
Translation proteins Nucleotide-diphospho-sugar transferases 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) SIS domain 11
Protein kinase-like (PK-like) Class II aaRS ABD-related 11
Staphylococcal nuclease Staphylococcal nuclease 11
Zn-dependent exopeptidases Carboxypeptidase regulatory domain-like 11
Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases tRNA-binding arm 11
Nucleic acid-binding proteins UBA-like 11
RNA-binding domain, RBD S-adenosyl-L-methionine-dependent methyltransferases 11
Thioredoxin-like NHL repeat 11
cAMP-binding domain-like Thioesterase/thiol ester dehydrase-isomerase 11
Cysteine proteinases Formin homology 2 domain (FH2 domain) 11
PRP4-like WD40 repeat-like 11
Glucocorticoid receptor-like (DNA-binding domain) L30e-like 11
YjgF-like YjgF-like 11
PurS-like Class I glutamine amidotransferase-like 11
BAH domain Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 11
HLH, helix-loop-helix DNA-binding domain Formin homology 2 domain (FH2 domain) 11
Adenine nucleotide alpha hydrolases-like Thioredoxin-like 11
F-box domain ARM repeat 11
Acyl-CoA N-acyltransferases (Nat) BRCT domain 11
C2 domain (Calcium/lipid-binding domain, CaLB) vWA-like 11
SSo0622-like Kelch motif 11
Quinoprotein alcohol dehydrogenase-like DNase I-like 11
Acetyl-CoA synthetase-like Acetyl-CoA synthetase-like 11
beta and beta-prime subunits of DNA dependent RNA-polymerase beta and beta-prime subunits of DNA dependent RNA-polymerase 11
HCP-like Pseudo ankyrin repeat-like 11
GAF domain-like HLH, helix-loop-helix DNA-binding domain 11
Tropomyosin Apolipoprotein A-I 11
Mannose-binding lectins Mannose-binding lectins 11
Beta-D-glucan exohydrolase, C-terminal domain Beta-D-glucan exohydrolase, C-terminal domain 11
RL5-like Glucocorticoid receptor-like (DNA-binding domain) 11
Adenine nucleotide alpha hydrolases-like Argininosuccinate synthetase, C-terminal domain 11
alpha-D-mannose-specific plant lectins EGF/Laminin 11
Hypothetical protein SAV1430 Fe-S cluster assembly (FSCA) domain-like 11
Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 Zinc beta-ribbon 11
WD40 repeat-like Calcium-dependent phosphotriesterase 11
Ricin B-like lectins Glycosyl hydrolase domain 11
Tudor/PWWP/MBT Tudor/PWWP/MBT 11
POZ domain Galactose-binding domain-like 11
NAD(P)-binding Rossmann-fold domains UDP-Glycosyltransferase/glycogen phosphorylase 11
UDP-Glycosyltransferase/glycogen phosphorylase Ribosomal protein S5 domain 2-like 11
SMI1/KNR4-like ApaG-like 11
P-loop containing nucleoside triphosphate hydrolases RuvA domain 2-like 11
PYP-like sensor domain (PAS domain) Homodimeric domain of signal transducing histidine kinase 11
CBS-domain pair FAD-binding/transporter-associated domain-like 11
BRCT domain Nucleotidyltransferase 11
Signal peptide-binding domain Sec-C motif 11
PDZ domain-like TPR-like 11
FYVE/PHD zinc finger ARM repeat 11
PIN domain-like Nucleic acid-binding proteins 11
Adenine nucleotide alpha hydrolases-like DHS-like NAD/FAD-binding domain 11
Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases Staphylococcal nuclease 11
FAD/NAD(P)-binding domain Trimeric LpxA-like enzymes 11
Metallo-hydrolase/oxidoreductase ATP-dependent DNA ligase DNA-binding domain 11
NAD(P)-binding Rossmann-fold domains 1-deoxy-D-xylulose-5-phosphate reductoisomerase, C-terminal domain 11
CCCH zinc finger ARM repeat 11
Glutamine synthetase/guanido kinase GatB/YqeY motif 11
FMN-linked oxidoreductases alpha-helical ferredoxin 11
Nucleotidyltransferase TGS-like 11
"Winged helix" DNA-binding domain HRDC-like 11
WD40 repeat-like TolB, C-terminal domain 11
Quinoprotein alcohol dehydrogenase-like Protein kinase-like (PK-like) 11
Cytidine deaminase-like Cytidine deaminase-like 11
Plus3-like GYF domain 11
NAD kinase/diacylglycerol kinase-like NAD kinase/diacylglycerol kinase-like 11
Rudiment single hybrid motif ClpP/crotonase 11
Cysteine-rich domain NAD kinase/diacylglycerol kinase-like 11
TGS-like ThrRS/AlaRS common domain 11
XRCC4, N-terminal domain XRCC4, C-terminal oligomerization domain 11
MurE/MurF N-terminal domain MurD-like peptide ligases, peptide-binding domain 11
DHH phosphoesterases DHH phosphoesterases 11
Thiamin diphosphate-binding fold (THDP-binding) Enolase C-terminal domain-like 11
NSFL1 (p97 ATPase) cofactor p47, SEP domain Ubiquitin-like 11
F-box domain Pectin lyase-like 11
Nucleic acid-binding proteins BRCT domain 11
FAD/NAD(P)-binding domain 4Fe-4S ferredoxins 11
E set domains Cytochrome b5-like heme/steroid binding domain 11
P-loop containing nucleoside triphosphate hydrolases Epsilon subunit of F1F0-ATP synthase N-terminal domain 11
Protein kinase-like (PK-like) NTF2-like 11
UDP-Glycosyltransferase/glycogen phosphorylase GHMP Kinase, C-terminal domain 11
Nucleic acid-binding proteins eIF2alpha middle domain-like 11
BRCT domain post-AAA+ oligomerization domain-like 11
Phospholipase C/P1 nuclease Phospholipase C/P1 nuclease 11
FAD/NAD(P)-binding domain S-adenosyl-L-methionine-dependent methyltransferases 11
IlvD/EDD N-terminal domain-like LeuD/IlvD-like 11
Thioredoxin-like eEF1-gamma domain 11
Protein kinase-like (PK-like) BEACH domain 11
TPR-like Metallo-dependent phosphatases 11
F-box domain SMI1/KNR4-like 11
Protein kinase-like (PK-like) UDP-Glycosyltransferase/glycogen phosphorylase 11
FAD-linked oxidoreductase P-loop containing nucleoside triphosphate hydrolases 11
Ribokinase-like Thiamin phosphate synthase 11
S-adenosyl-L-methionine-dependent methyltransferases PLP-dependent transferases 11
C2 domain (Calcium/lipid-binding domain, CaLB) Protein kinase-like (PK-like) 11
Cyclophilin-like TPR-like 11
FYSH domain Hypothetical protein AF0491, middle domain 11
PGBD-like DnaJ/Hsp40 cysteine-rich domain 11
SSo0622-like S-adenosyl-L-methionine-dependent methyltransferases 11
UraD-Like Transthyretin (synonym: prealbumin) 11
Methionyl-tRNA synthetase (MetRS), Zn-domain Nucleic acid-binding proteins 11
S15/NS1 RNA-binding domain Class II aaRS and biotin synthetases 11
Transcription factor IIA (TFIIA), alpha-helical domain Transcription factor IIA (TFIIA), beta-barrel domain 11
Carboxypeptidase regulatory domain-like Cna protein B-type domain 11
C2 domain (Calcium/lipid-binding domain, CaLB) MHC antigen-recognition domain 11
EF-hand Metallo-dependent phosphatases 11
Starch-binding domain-like Cna protein B-type domain 11
Formate/glycerate dehydrogenase catalytic domain-like Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 11
Hypothetical protein PA1324 Carboxypeptidase regulatory domain-like 11
PP2C-like PP2C-like 11
Methylglyoxal synthase-like Cytidine deaminase-like 11
beta-beta-alpha zinc fingers S-adenosyl-L-methionine-dependent methyltransferases 11
(Phosphotyrosine protein) phosphatases II Nucleic acid-binding proteins 11
DNase I-like DNase I-like 11
Carbamoyl phosphate synthetase, small subunit N-terminal domain Class I glutamine amidotransferase-like 11
WD40 repeat-like TPR-like 11
FAD-linked oxidases, C-terminal domain FAD-linked oxidases, C-terminal domain 11
Glutathione synthetase ATP-binding domain-like ClpP/crotonase 11
Pre-PUA domain PUA domain-like 11
Chromo domain-like Ankyrin repeat 11
Amidase signature (AS) enzymes Amidase signature (AS) enzymes 11
Nucleic acid-binding proteins eIF-2-alpha, C-terminal domain 11
PreATP-grasp domain ClpP/crotonase 11
TGS-like Class II aaRS ABD-related 11
Acetyl-CoA synthetase-like Trimeric LpxA-like enzymes 11
FAD/NAD(P)-binding domain alpha/beta-Hydrolases 11
Urease, gamma-subunit Metallo-dependent hydrolases 11
C-type lectin-like Protein kinase-like (PK-like) 11
HAD-like Riboflavin kinase-like 11
WD40 repeat-like DNase I-like 11
Cytochrome b5-like heme/steroid binding domain Riboflavin synthase domain-like 11
Phosphohistidine domain Phosphoenolpyruvate/pyruvate domain 11
PRP4-like Functional domain of the splicing factor Prp18 11
GST C-terminal domain-like Nucleotidylyl transferase 11
Obg GTP-binding protein N-terminal domain Obg GTP-binding protein C-terminal domain 11
Fe-S cluster assembly (FSCA) domain-like P-loop containing nucleoside triphosphate hydrolases 11
Ankyrin repeat S-adenosyl-L-methionine-dependent methyltransferases 11
FAD/NAD(P)-binding domain Acetyl-CoA synthetase-like 11
Nucleotide-diphospho-sugar transferases Nucleotide-diphospho-sugar transferases 11
ARM repeat FabD/lysophospholipase-like 11
Protein kinase-like (PK-like) Class II aaRS and biotin synthetases 11
L9 N-domain-like Ribonuclease H-like 11
Periplasmic binding protein-like II GlnB-like 11
MFS general substrate transporter HMA, heavy metal-associated domain 11
"Winged helix" DNA-binding domain Protein kinase-like (PK-like) 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) PRTase-like 11
HMA, heavy metal-associated domain Cu,Zn superoxide dismutase-like 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) alpha-helical ferredoxin 11
Clavaminate synthase-like RING/U-box 11
FYVE/PHD zinc finger PUA domain-like 11
Cysteine proteinases SET domain 11
Trimeric LpxA-like enzymes ARM repeat 11
FYVE/PHD zinc finger Transducin (alpha subunit), insertion domain 11
TPR-like "Winged helix" DNA-binding domain 11
RNA-binding domain, RBD Clavaminate synthase-like 11
Tudor/PWWP/MBT DNA repair protein MutS, domain I 11
HCP-like Thioredoxin-like 11
DUSP-like Ubiquitin-like 11
PurM N-terminal domain-like PurM N-terminal domain-like 11
PUA domain-like SWIB/MDM2 domain 11
ARM repeat "Winged helix" DNA-binding domain 11
SMAD/FHA domain BRCT domain 11
TPR-like PUA domain-like 11
4Fe-4S ferredoxins Metallo-hydrolase/oxidoreductase 11
Activator of Hsp90 ATPase, Aha1 Bet v1-like 11
Starch-binding domain-like (Trans)glycosidases 11
Eukaryotic type KH-domain (KH-domain type I) LigT-like 11
Lipase/lipooxygenase domain (PLAT/LH2 domain) AF1104-like 11
DHS-like NAD/FAD-binding domain Enolase C-terminal domain-like 11
Rhomboid-like UBA-like 11
Trimeric LpxA-like enzymes Heme-dependent catalase-like 11
UBC-like Class II aaRS ABD-related 11
Ribonuclease H-like SH2 domain 11
MoeA N-terminal region -like Molybdenum cofactor biosynthesis proteins 11
Elongation factor TFIIS domain 2 Zinc beta-ribbon 11
Nucleoside hydrolase Nucleoside hydrolase 11
RNI-like ARM repeat 11
Carbamate kinase-like NAD(P)-binding Rossmann-fold domains 11
Protein kinase-like (PK-like) Acyl-CoA dehydrogenase NM domain-like 11
UBC-like Class II aaRS and biotin synthetases 11
Fumarylacetoacetate hydrolase, FAH, N-terminal domain FAH 11
FAD/NAD(P)-binding domain Heme-dependent catalase-like 11
Glutathione synthetase ATP-binding domain-like Carbamoyl phosphate synthetase, large subunit connection domain 11
FAD/NAD(P)-binding domain Thioredoxin-like 11
Multidrug efflux transporter AcrB transmembrane domain Multidrug efflux transporter AcrB transmembrane domain 11
DAK1/DegV-like DhaL-like 11
Lipocalins Lipocalins 11
dsRNA-binding domain-like Intermediate filament protein, coiled coil region 11
Aldolase 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain 11
EF-hand TPR-like 11
eIF2alpha middle domain-like eIF-2-alpha, C-terminal domain 11
Trigger factor ribosome-binding domain Triger factor/SurA peptide-binding domain-like 11
PLP-dependent transferases Ornithine decarboxylase C-terminal domain 11
N-terminal domain of adenylylcyclase associated protein, CAP C-terminal domain of adenylylcyclase associated protein 11
Zinc beta-ribbon Cyclin-like 11
TAF(II)230 TBP-binding fragment Ubiquitin-like 11
P-loop containing nucleoside triphosphate hydrolases VC0467-like 11
alpha/beta-Hydrolases P-loop containing nucleoside triphosphate hydrolases 11
PRTase-like Ribulose-phoshate binding barrel 11
Macro domain-like HIT-like 11
Alpha-L RNA-binding motif S-adenosyl-L-methionine-dependent methyltransferases 11
Surp module (SWAP domain) ENTH/VHS domain 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) FAD/NAD(P)-binding domain 11
Nucleotidylyl transferase An anticodon-binding domain of class I aminoacyl-tRNA synthetases 11
Oxidoreductase molybdopterin-binding domain Cytochrome b5-like heme/steroid binding domain 11
MHC antigen-recognition domain ARM repeat 11
SH2 domain SH2 domain 11
Rudiment single hybrid motif N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE) 11
"Winged helix" DNA-binding domain E set domains 11
Type II DNA topoisomerase GyrA/ParC C-terminal domain-like 11
Cation efflux protein cytoplasmic domain-like Cation efflux protein cytoplasmic domain-like 11
HAD-like dsRNA-binding domain-like 11
Formyltransferase FMT C-terminal domain-like 11
Ribonuclease H-like RuvA domain 2-like 11
F-box domain HIT/MYND zinc finger-like 11
Prokaryotic type I DNA topoisomerase Retrovirus zinc finger-like domains 11
P-loop containing nucleoside triphosphate hydrolases Tropomyosin 11
WD40 repeat-like NHL repeat 11
Ubiquitin-like Ubiquitin-like 11
RNA-binding domain, RBD ENTH/VHS domain 11
Ribonuclease H-like Ribonuclease H-like 11
Starch-binding domain-like P-loop containing nucleoside triphosphate hydrolases 11
Taf5 N-terminal domain-like WD40 repeat-like 11
R3H domain Ankyrin repeat 11
"Winged helix" DNA-binding domain RNI-like 11
RNI-like Outer arm dynein light chain 1 11
POZ domain Pentapeptide repeat-like 11
Clathrin heavy-chain terminal domain ARM repeat 11
L-aspartase-like Class II aaRS ABD-related 11
PAH2 domain PAH2 domain 11
Metalloproteases ("zincins"), catalytic domain ARM repeat 11
Macro domain-like Zn-dependent exopeptidases 11
ARM repeat alpha/beta-Hydrolases 11
FKBP-like Triger factor/SurA peptide-binding domain-like 11
HAD-like Thioredoxin-like 11
Riboflavin synthase domain-like Riboflavin synthase domain-like 11
FKBP12-rapamycin-binding domain of FKBP-rapamycin-associated protein (FRAP) Protein kinase-like (PK-like) 11
NAD(P)-binding Rossmann-fold domains UDP-glucose/GDP-mannose dehydrogenase C-terminal domain 11
PRC-barrel domain Nucleotide-diphospho-sugar transferases 11
PapD-like Ankyrin repeat 11
Tropomyosin Mitotic arrest deficient-like 1, Mad1 11
F-box domain Cullin repeat-like 11
Glutathione synthetase ATP-binding domain-like Methylglyoxal synthase-like 11
Periplasmic binding protein-like II Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain 11
Carbamate kinase-like Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 11
CBS-domain pair Inosine monophosphate dehydrogenase (IMPDH) 11
Aspartate/glutamate racemase Aspartate/glutamate racemase 11
vWA-like SAP domain 11
Ankyrin repeat RNA-binding domain, RBD 11
Galactose oxidase, central domain P-loop containing nucleoside triphosphate hydrolases 11
Toll/Interleukin receptor TIR domain Toll/Interleukin receptor TIR domain 11
SAM/Pointed domain Metallo-hydrolase/oxidoreductase 11
Protein kinase-like (PK-like) S-adenosyl-L-methionine-dependent methyltransferases 11
Pseudouridine synthase PUA domain-like 11
ACP-like Trimeric LpxA-like enzymes 11
MurE/MurF N-terminal domain MurD-like peptide ligases, catalytic domain 11
HAD-like NTF2-like 11
alpha-ketoacid dehydrogenase kinase, N-terminal domain ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 11
Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases Nucleic acid-binding proteins 11
PurM C-terminal domain-like PurM C-terminal domain-like 11
Protein kinase-like (PK-like) (Phosphotyrosine protein) phosphatases II 11
DHS-like NAD/FAD-binding domain Enolase N-terminal domain-like 11
Glutathione synthetase ATP-binding domain-like Phosphohistidine domain 11
BRCT domain DNA polymerase beta, N-terminal domain-like 11
Concanavalin A-like lectins/glucanases RING/U-box 11
lambda repressor-like DNA-binding domains Cyanase C-terminal domain 11
Nucleotidylyl transferase Nucleic acid-binding proteins 11
Rhomboid-like Ran binding protein zinc finger-like 11
Putative DNA-binding domain Class II aaRS and biotin synthetases 11
DNA polymerase beta, N-terminal domain-like Nucleotidyltransferase 11
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase RING/U-box 11
P-loop containing nucleoside triphosphate hydrolases Phosphoglycerate mutase-like 11
Chromo domain-like Acyl-CoA N-acyltransferases (Nat) 11
RNA-binding domain, RBD Surp module (SWAP domain) 11
Kelch motif S-adenosyl-L-methionine-dependent methyltransferases 11
PLP-dependent transferases ARM repeat 11
P-loop containing nucleoside triphosphate hydrolases Ribosomal protein L11, C-terminal domain 11
Cysteine proteinases Calpain large subunit, middle domain (domain III) 11
Nucleotidyltransferase EF-hand 11
RNA-binding domain, RBD WW domain 11
(Trans)glycosidases Ricin B-like lectins 11
Ubiquitin-like Acid proteases 11
Heat shock protein 70kD (HSP70), C-terminal subdomain Heat shock protein 70kD (HSP70), C-terminal subdomain 11
Adenine nucleotide alpha hydrolases-like GMP synthetase C-terminal dimerisation domain 11
BRCA2 helical domain Nucleic acid-binding proteins 11
Acyl-CoA binding protein Ankyrin repeat 11
Class II aaRS and biotin synthetases Anticodon-binding domain of PheRS 11
Acetyl-CoA synthetase-like Quinoprotein alcohol dehydrogenase-like 11
BRCA2 helical domain BRCA2 tower domain 11
Single hybrid motif ClpP/crotonase 11
Chromo domain-like Homeodomain-like 11
BRCT domain ADP-ribosylation 11
GYF domain F-box domain 11
GroEL-intermediate domain like SAICAR synthase-like 11
Class II aaRS and biotin synthetases HD-domain/PDEase-like 11
Ubiquitin-like Protein kinase-like (PK-like) 11
Ankyrin repeat RCC1/BLIP-II 11
Galactose-binding domain-like ARM repeat 11
PreATP-grasp domain Methylglyoxal synthase-like 11
"Winged helix" DNA-binding domain Zinc beta-ribbon 11
PH domain-like (Phosphotyrosine protein) phosphatases II 11
Trimeric LpxA-like enzymes Trimeric LpxA-like enzymes 11
Alpha subunit of glutamate synthase, C-terminal domain FAD/NAD(P)-binding domain 11
Oxidoreductase molybdopterin-binding domain Riboflavin synthase domain-like 11
NAD(P)-binding Rossmann-fold domains Citrate synthase 11
F-box domain LysM domain 11
Hypothetical protein AF0491, middle domain beta-beta-alpha zinc fingers 11
Methionyl-tRNA synthetase (MetRS), Zn-domain Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 11
Chaperone J-domain HSC20 (HSCB), C-terminal oligomerisation domain 11
WD40 repeat-like Tricorn protease domain 2 11
PH domain-like HMG-box 11
Nucleic acid-binding proteins BRCA2 tower domain 11
FGAM synthase PurL, linker domain PurM C-terminal domain-like 11
Molybdenum cofactor biosynthesis proteins Molybdenum cofactor biosynthesis proteins 11
HIT-like HIT-like 11
(Phosphotyrosine protein) phosphatases II (Phosphotyrosine protein) phosphatases II 11
DNA-glycosylase Nudix 11
FAD/NAD(P)-binding domain HI0933 insert domain-like 11
PurS-like PurM C-terminal domain-like 11
Acyl-CoA binding protein Galactose oxidase, central domain 11
Plus3-like CCCH zinc finger 11
Radical SAM enzymes Acyl-CoA N-acyltransferases (Nat) 11
Quinoprotein alcohol dehydrogenase-like ARM repeat 11
Concanavalin A-like lectins/glucanases Calpain large subunit, middle domain (domain III) 11
P-loop containing nucleoside triphosphate hydrolases CCCH zinc finger 11
FYVE/PHD zinc finger TPR-like 11
RING/U-box Cysteine-rich domain 11
DNase I-like EF-hand 11
ARM repeat FKBP12-rapamycin-binding domain of FKBP-rapamycin-associated protein (FRAP) 11
S-adenosyl-L-methionine-dependent methyltransferases Putative methyltransferase TM0872, insert domain 11
WD40 repeat-like Bromodomain 11
BRCT domain Lesion bypass DNA polymerase (Y-family), little finger domain 11
MIT domain P-loop containing nucleoside triphosphate hydrolases 11
beta and beta-prime subunits of DNA dependent RNA-polymerase F1F0 ATP synthase subunit A 11
FYVE/PHD zinc finger Ankyrin repeat 11
F-box domain SET domain 11
FYSH domain beta-beta-alpha zinc fingers 11
BRCT domain WGR domain-like 11
Probable bacterial effector-binding domain Probable bacterial effector-binding domain 11
Ubiquitin-like Bromodomain 11
Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 Elongation factor TFIIS domain 2 11
WWE domain ADP-ribosylation 11
Phosphoglycerate mutase-like Phosphoglycerate mutase-like 11
Nucleotidyltransferase ACT-like 11
PurS-like PurM N-terminal domain-like 11
TPR-like PH domain-like 11
Trimeric LpxA-like enzymes Ribosomal protein S5 domain 2-like 11
Nucleic acid-binding proteins Elongation factor Ts (EF-Ts), dimerisation domain 11
P-loop containing nucleoside triphosphate hydrolases RNA-binding domain, RBD 11
Tudor/PWWP/MBT RNA-binding domain, RBD 11
Metallo-dependent hydrolases Glutamine synthetase/guanido kinase 11
Ubiquitin-like HAD-like 11
Ribosomal protein S2 F1F0 ATP synthase subunit A 11
Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 11
Thiamin diphosphate-binding fold (THDP-binding) Enolase N-terminal domain-like 11
Actin depolymerizing proteins C-terminal, gelsolin-like domain of Sec23/24 11
TPR-like RNI-like 11
UBA-like KA1-like 11
P-loop containing nucleoside triphosphate hydrolases PH domain-like 11
BSD domain-like BSD domain-like 11
2Fe-2S ferredoxin-like Formate dehydrogenase/DMSO reductase, domains 1-3 11
DNA-binding domain DNA-binding pseudobarrel domain 11
PDZ domain-like PDZ domain-like 11
beta-beta-alpha zinc fingers CCCH zinc finger 11
RING/U-box Ran binding protein zinc finger-like 11
HAD-like HAD-like 11
Chaperone J-domain E set domains 11
TPR-like FKBP12-rapamycin-binding domain of FKBP-rapamycin-associated protein (FRAP) 11
Endosomal sorting complex assembly domain VPS28 C-terminal domain-like 11
Glutamyl tRNA-reductase catalytic, N-terminal domain NAD(P)-binding Rossmann-fold domains 11
E set domains Riboflavin synthase domain-like 11
Glutamyl tRNA-reductase catalytic, N-terminal domain Glutamyl tRNA-reductase dimerization domain 11
Spermadhesin, CUB domain Protein kinase-like (PK-like) 11
Protein kinase-like (PK-like) beta-lactamase/transpeptidase-like 11
Class II aaRS and biotin synthetases GAD domain-like 11
P-loop containing nucleoside triphosphate hydrolases HAND domain of the nucleosome remodeling ATPase ISWI 11
UBC-like Protein kinase-like (PK-like) 11
Adenine nucleotide alpha hydrolases-like YjgF-like 11
SNARE fusion complex SNARE fusion complex 11
E set domains CBS-domain pair 11
Granulin repeat Formin homology 2 domain (FH2 domain) 11
Tropomyosin Tropomyosin 11
SAP domain FYVE/PHD zinc finger 11
RmlC-like cupins RmlC-like cupins 11
4Fe-4S ferredoxins Formate dehydrogenase/DMSO reductase, domains 1-3 11
UBC-like UBA-like 11
ARM repeat alpha/beta knot 11
Metallo-hydrolase/oxidoreductase Nucleic acid-binding proteins 11
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase S13-like H2TH domain 11
P-loop containing nucleoside triphosphate hydrolases Obg GTP-binding protein C-terminal domain 11
PH domain-like Phospholipase D/nuclease 11
MoeA N-terminal region -like MoeA C-terminal domain-like 11
Actin-like ATPase domain AF1104-like 11
Carbamoyl phosphate synthetase, large subunit connection domain Methylglyoxal synthase-like 11
SufE/NifU NadA-like 11
Eukaryotic DNA topoisomerase I, N-terminal DNA-binding fragment DNA breaking-rejoining enzymes 11
Ubiquitin-like P-loop containing nucleoside triphosphate hydrolases 11
Tricorn protease N-terminal domain DPP6 N-terminal domain-like 11
Chaperone J-domain beta-beta-alpha zinc fingers 11
HCP-like SMR domain-like 11
Rudiment single hybrid motif Cytochrome f subunit of the cytochrome b6f complex, transmembrane anchor 11
N-terminal domain of MutM-like DNA repair proteins S13-like H2TH domain 11
Metallo-hydrolase/oxidoreductase DNA ligase/mRNA capping enzyme, catalytic domain 11
Cysteine-rich domain BRCT domain 11
FGAM synthase PurL, linker domain PurM N-terminal domain-like 11
Activating enzymes of the ubiquitin-like proteins Activating enzymes of the ubiquitin-like proteins 11
F-box domain NTF2-like 11
ARM repeat Clavaminate synthase-like 11

Jump to [ Top of page · Add/remove domain pairs · Add/remove genomes · Domain combination pairs ]