SUPERFAMILY 1.75 HMM library and genome assignments server

Domain combination pairs in Pichia membranifaciensv1.0

All pairs of domain combinations at the superfamily level are listed here.
The identification of domain pairs does not account for the possibility of non-contiguous domains. Inserted, or interlaced, domains are seen as having a simple pair ordering.

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Domain combination pairs

984 domain combination pairs.
Click on a column heading to sort that column, or the 'View' button to see domain architetures for that domain pair combination.

Superfamily (N) Superfamily (C) Number of occurrances Number unique
P-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases 6734
Actin-like ATPase domain Actin-like ATPase domain 2813
GroES-like NAD(P)-binding Rossmann-fold domains 172
RNA-binding domain, RBD RNA-binding domain, RBD 1712
Calcium ATPase, transduction domain A Calcium ATPase, transmembrane domain M 145
Calcium ATPase, transduction domain A HAD-like 145
P-loop containing nucleoside triphosphate hydrolases Translation proteins 1410
HAD-like Calcium ATPase, transmembrane domain M 145
ARM repeat ARM repeat 139
TPR-like TPR-like 127
ABC transporter transmembrane region P-loop containing nucleoside triphosphate hydrolases 125
Riboflavin synthase domain-like Ferredoxin reductase-like, C-terminal NADP-linked domain 107
Metal cation-transporting ATPase, ATP-binding domain N HAD-like 102
Calcium ATPase, transduction domain A Metal cation-transporting ATPase, ATP-binding domain N 102
Metal cation-transporting ATPase, ATP-binding domain N Calcium ATPase, transmembrane domain M 102
Cyclin-like Cyclin-like 95
Nucleotidylyl transferase Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 97
Homeodomain-like Homeodomain-like 96
GroEL equatorial domain-like GroEL apical domain-like 91
GroEL equatorial domain-like GroEL-intermediate domain like 91
GroEL-intermediate domain like GroEL apical domain-like 91
Thioredoxin-like GST C-terminal domain-like 93
WD40 repeat-like WD40 repeat-like 85
ARM repeat Protein kinase-like (PK-like) 88
LuxS/MPP-like metallohydrolase LuxS/MPP-like metallohydrolase 85
NAD(P)-binding Rossmann-fold domains 6-phosphogluconate dehydrogenase C-terminal domain-like 83
Ypt/Rab-GAP domain of gyp1p Ypt/Rab-GAP domain of gyp1p 86
Actin-like ATPase domain Heat shock protein 70kD (HSP70), peptide-binding domain 84
NAD(P)-binding Rossmann-fold domains Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 85
PreATP-grasp domain Glutathione synthetase ATP-binding domain-like 88
ABC transporter transmembrane region ABC transporter transmembrane region 83
FAD/NAD(P)-binding domain FAD-linked reductases, C-terminal domain 74
FAD/NAD(P)-binding domain FAD/NAD(P)-binding domain 74
P-loop containing nucleoside triphosphate hydrolases Ribosomal protein S5 domain 2-like 77
Aminoacid dehydrogenase-like, N-terminal domain NAD(P)-binding Rossmann-fold domains 75
beta-beta-alpha zinc fingers beta-beta-alpha zinc fingers 75
P-loop containing nucleoside triphosphate hydrolases EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 62
EF-G C-terminal domain-like EF-G C-terminal domain-like 66
P-loop containing nucleoside triphosphate hydrolases post-AAA+ oligomerization domain-like 62
Translation proteins EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 62
Formate/glycerate dehydrogenase catalytic domain-like NAD(P)-binding Rossmann-fold domains 64
Actin-like ATPase domain Heat shock protein 70kD (HSP70), C-terminal subdomain 62
Class II aaRS and biotin synthetases Class II aaRS ABD-related 66
Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) 63
P-loop containing nucleoside triphosphate hydrolases EF-G C-terminal domain-like 66
HSP40/DnaJ peptide-binding domain HSP40/DnaJ peptide-binding domain 64
Nucleic acid-binding proteins P-loop containing nucleoside triphosphate hydrolases 61
Heat shock protein 70kD (HSP70), peptide-binding domain Heat shock protein 70kD (HSP70), C-terminal subdomain 62
Glutathione synthetase ATP-binding domain-like Rudiment single hybrid motif 66
Zn-dependent exopeptidases Bacterial exopeptidase dimerisation domain 62
Chaperone J-domain HSP40/DnaJ peptide-binding domain 64
Translation proteins EF-G C-terminal domain-like 66
Nucleotide-binding domain FAD-linked reductases, C-terminal domain 63
SNARE-like Second domain of Mu2 adaptin subunit (ap50) of ap2 adaptor 54
Chaperone J-domain DnaJ/Hsp40 cysteine-rich domain 53
Ribonuclease H-like DNA/RNA polymerases 52
Nucleic acid-binding proteins Class II aaRS and biotin synthetases 53
ValRS/IleRS/LeuRS editing domain Nucleotidylyl transferase 53
ValRS/IleRS/LeuRS editing domain Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 53
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase Ribosomal protein S5 domain 2-like 54
Leukotriene A4 hydrolase N-terminal domain Metalloproteases ("zincins"), catalytic domain 53
DnaJ/Hsp40 cysteine-rich domain HSP40/DnaJ peptide-binding domain 53
"Winged helix" DNA-binding domain "Winged helix" DNA-binding domain 55
PreATP-grasp domain Rudiment single hybrid motif 55
P-loop containing nucleoside triphosphate hydrolases "Winged helix" DNA-binding domain 44
Zn-finger domain of Sec23/24 vWA-like 43
BAR/IMD domain-like SH3-domain 43
Helical domain of Sec23/24 C-terminal, gelsolin-like domain of Sec23/24 43
FAD-binding/transporter-associated domain-like FAD-linked oxidases, C-terminal domain 41
CBS-domain pair CBS-domain pair 44
Nucleic acid-binding proteins Translation proteins SH3-like domain 43
Creatinase/prolidase N-terminal domain Creatinase/aminopeptidase 44
vWA-like C-terminal, gelsolin-like domain of Sec23/24 43
CRAL/TRIO N-terminal domain CRAL/TRIO domain 43
MFS general substrate transporter MFS general substrate transporter 43
P-loop containing nucleoside triphosphate hydrolases RING/U-box 42
Nucleic acid-binding proteins Nucleic acid-binding proteins 44
SH3-domain SH3-domain 44
ARM repeat WD40 repeat-like 44
EF-G C-terminal domain-like Ribosomal protein S5 domain 2-like 44
vWA-like Helical domain of Sec23/24 43
vWA-like beta-sandwich domain of Sec23/24 43
Thioesterase/thiol ester dehydrase-isomerase Thioesterase/thiol ester dehydrase-isomerase 44
DNA repair protein MutS, domain III P-loop containing nucleoside triphosphate hydrolases 44
Zn-finger domain of Sec23/24 Helical domain of Sec23/24 43
beta-sandwich domain of Sec23/24 C-terminal, gelsolin-like domain of Sec23/24 43
PA domain Zn-dependent exopeptidases 42
P-loop containing nucleoside triphosphate hydrolases TGS-like 41
beta-sandwich domain of Sec23/24 Helical domain of Sec23/24 43
P-loop containing nucleoside triphosphate hydrolases Phosphoglycerate mutase-like 41
Zn-finger domain of Sec23/24 beta-sandwich domain of Sec23/24 43
Zn-finger domain of Sec23/24 C-terminal, gelsolin-like domain of Sec23/24 43
Thiamin diphosphate-binding fold (THDP-binding) DHS-like NAD/FAD-binding domain 41
Thiolase-like Thiolase-like 43
Aconitase iron-sulfur domain LeuD/IlvD-like 41
PIN domain-like 5' to 3' exonuclease, C-terminal subdomain 43
Translation proteins Ribosomal protein S5 domain 2-like 44
UBA-like Ubiquitin-like 44
Composite domain of metallo-dependent hydrolases Metallo-dependent hydrolases 43
TPR-like P-loop containing nucleoside triphosphate hydrolases 33
RING/U-box Cysteine proteinases 33
"Winged helix" DNA-binding domain Sec63 N-terminal domain-like 33
Flavoproteins Riboflavin synthase domain-like 32
Homodimeric domain of signal transducing histidine kinase ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 33
alpha-ketoacid dehydrogenase kinase, N-terminal domain ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 32
Thioredoxin-like Thioredoxin-like 33
Flavoproteins Ferredoxin reductase-like, C-terminal NADP-linked domain 32
FAD/NAD(P)-binding domain FAD/NAD-linked reductases, dimerisation (C-terminal) domain 32
YVTN repeat-like/Quinoprotein amine dehydrogenase WD40 repeat-like 33
CorA soluble domain-like Magnesium transport protein CorA, transmembrane region 32
F-box domain RNI-like 33
P-loop containing nucleoside triphosphate hydrolases Bromodomain 33
NAD(P)-binding Rossmann-fold domains LDH C-terminal domain-like 31
ARM repeat P-loop containing nucleoside triphosphate hydrolases 33
PreATP-grasp domain Single hybrid motif 33
L domain-like L domain-like 33
FYVE/PHD zinc finger FYVE/PHD zinc finger 33
Ribosomal protein S5 domain 2-like GHMP Kinase, C-terminal domain 31
Glutathione synthetase ATP-binding domain-like Single hybrid motif 33
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase CheY-like 33
Zn-dependent exopeptidases Transferrin receptor-like dimerisation domain 31
CoA-dependent acyltransferases CoA-dependent acyltransferases 32
Phosphoglucomutase, first 3 domains Phosphoglucomutase, first 3 domains 33
DNA ligase/mRNA capping enzyme, catalytic domain Nucleic acid-binding proteins 33
DNA repair protein MutS, domain I DNA repair protein MutS, domain III 33
P-loop containing nucleoside triphosphate hydrolases FtsH protease domain-like 31
BAR/IMD domain-like PH domain-like 33
N-terminal domain of alpha and beta subunits of F1 ATP synthase C-terminal domain of alpha and beta subunits of F1 ATP synthase 33
EF-hand EF-hand 33
Phosphoglucomutase, first 3 domains Phosphoglucomutase, C-terminal domain 33
Cdc48 domain 2-like P-loop containing nucleoside triphosphate hydrolases 32
ADC-like Cdc48 domain 2-like 32
cAMP-binding domain-like cAMP-binding domain-like 33
Cupredoxins Cupredoxins 32
Eukaryotic type KH-domain (KH-domain type I) Eukaryotic type KH-domain (KH-domain type I) 32
ADC-like P-loop containing nucleoside triphosphate hydrolases 32
F-box domain WD40 repeat-like 33
P-loop containing nucleoside triphosphate hydrolases C-terminal domain of alpha and beta subunits of F1 ATP synthase 33
Aldolase post-HMGL domain-like 32
Tubulin nucleotide-binding domain-like Tubulin C-terminal domain-like 32
ENTH/VHS domain GAT-like domain 33
GINS helical bundle-like PriA/YqbF domain 32
Bromodomain Bromodomain 33
N-terminal domain of alpha and beta subunits of F1 ATP synthase P-loop containing nucleoside triphosphate hydrolases 33
SMAD/FHA domain Protein kinase-like (PK-like) 32
DPP6 N-terminal domain-like WD40 repeat-like 32
P-loop containing nucleoside triphosphate hydrolases Sec63 N-terminal domain-like 33
DNA repair protein MutS, domain I P-loop containing nucleoside triphosphate hydrolases 33
Rudiment single hybrid motif Single hybrid motif 33
C2 domain (Calcium/lipid-binding domain, CaLB) Protein kinase-like (PK-like) 33
ARM repeat Clathrin adaptor appendage domain 33
Ribosomal protein S5 domain 2-like Ribonuclease PH domain 2-like 32
Thioredoxin-like Ubiquitin-like 33
RNase III domain-like dsRNA-binding domain-like 33
Phospholipase D/nuclease Phospholipase D/nuclease 33
PA domain Transferrin receptor-like dimerisation domain 31
BRCT domain BRCT domain 32
Sec63 N-terminal domain-like E set domains 33
Homodimeric domain of signal transducing histidine kinase CheY-like 33
Cytochrome b5-like heme/steroid binding domain FMN-linked oxidoreductases 32
Nucleotidyltransferase PAP/OAS1 substrate-binding domain 22
tRNA-binding arm Class II aaRS and biotin synthetases 21
Sec63 N-terminal domain-like Sec63 N-terminal domain-like 22
Amine oxidase N-terminal region Amine oxidase catalytic domain 21
HCP-like HCP-like 22
Ankyrin repeat PLC-like phosphodiesterases 22
Zinc beta-ribbon Cyclin-like 22
Thiamin diphosphate-binding fold (THDP-binding) TK C-terminal domain-like 22
Glutathione synthetase ATP-binding domain-like Cyclophilin-like 22
P-loop containing nucleoside triphosphate hydrolases Initiation factor IF2/eIF5b, domain 3 22
HCP-like TPR-like 22
dsRNA-binding domain-like Ribosomal protein S5 domain 2-like 21
Cullin repeat-like "Winged helix" DNA-binding domain 21
HAND domain of the nucleosome remodeling ATPase ISWI Homeodomain-like 22
Carbamoyl phosphate synthetase, small subunit N-terminal domain Class I glutamine amidotransferase-like 22
ARM repeat Hect, E3 ligase catalytic domain 22
N-terminal nucleophile aminohydrolases (Ntn hydrolases) Adenine nucleotide alpha hydrolases-like 22
RING/U-box RING/U-box 22
DBL homology domain (DH-domain) PH domain-like 22
Glutathione synthetase ATP-binding domain-like Carbamoyl phosphate synthetase, large subunit connection domain 22
Cullin repeat-like Cullin homology domain 21
PreATP-grasp domain Methylglyoxal synthase-like 22
SMAD/FHA domain "Winged helix" DNA-binding domain 22
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase DNA mismatch repair protein MutL 22
P-loop containing nucleoside triphosphate hydrolases Homeodomain-like 22
Tetrahydrobiopterin biosynthesis enzymes-like Tetrahydrobiopterin biosynthesis enzymes-like 22
Translation proteins ThrRS/AlaRS common domain 22
alpha/beta-Hydrolases (Phosphotyrosine protein) phosphatases II 22
P-loop containing nucleoside triphosphate hydrolases E set domains 22
Translation initiation factor 2 beta, aIF2beta, N-terminal domain Zinc-binding domain of translation initiation factor 2 beta 22
Cyclophilin-like TPR-like 21
ARM repeat PH domain-like 22
post-HMGL domain-like 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain 21
DNA-binding domain of Mlu1-box binding protein MBP1 Ankyrin repeat 21
Rudiment single hybrid motif Cyclophilin-like 22
Amine oxidase N-terminal region Amine oxidase N-terminal region 21
Tryptophan synthase beta subunit-like PLP-dependent enzymes ACT-like 21
Protein kinase-like (PK-like) CheY-like 22
SH3-domain PX domain 22
Class II aaRS and biotin synthetases ThrRS/AlaRS common domain 22
DNA repair protein MutS, domain II P-loop containing nucleoside triphosphate hydrolases 22
Nucleic acid-binding proteins Eukaryotic type KH-domain (KH-domain type I) 22
P-loop containing nucleoside triphosphate hydrolases EF-hand 22
Translational machinery components L30e-like 22
Protein kinase-like (PK-like) KA1-like 22
Ribosomal protein L6 Ribosomal protein L6 21
Phosphofructokinase Phosphofructokinase 21
Transcription factor IIA (TFIIA), alpha-helical domain Transcription factor IIA (TFIIA), beta-barrel domain 22
C2 domain (Calcium/lipid-binding domain, CaLB) C2 domain (Calcium/lipid-binding domain, CaLB) 21
Cyclophilin-like Cyclophilin-like 22
P-loop containing nucleoside triphosphate hydrolases HAND domain of the nucleosome remodeling ATPase ISWI 22
Multidrug resistance efflux transporter EmrE Multidrug resistance efflux transporter EmrE 22
SH3-domain CAD & PB1 domains 22
Cation efflux protein transmembrane domain-like Cation efflux protein cytoplasmic domain-like 22
PreATP-grasp domain Carbamoyl phosphate synthetase, large subunit connection domain 22
P-loop containing nucleoside triphosphate hydrolases Hypothetical protein YjiA, C-terminal domain 22
GST C-terminal domain-like eEF1-gamma domain 22
Voltage-gated potassium channels Voltage-gated potassium channels 22
Domain of the SRP/SRP receptor G-proteins P-loop containing nucleoside triphosphate hydrolases 22
WD40 repeat-like Protein kinase-like (PK-like) 22
PH domain-like Oxysterol-binding protein-like 22
DNA/RNA polymerases Lesion bypass DNA polymerase (Y-family), little finger domain 22
Insert subdomain of RNA polymerase alpha subunit RBP11-like subunits of RNA polymerase 22
(Phosphotyrosine protein) phosphatases II (Phosphotyrosine protein) phosphatases II 22
P-loop containing nucleoside triphosphate hydrolases Aminoacid dehydrogenase-like, N-terminal domain 22
Aldolase 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain 21
CCCH zinc finger CCCH zinc finger 22
Transducin (alpha subunit), insertion domain P-loop containing nucleoside triphosphate hydrolases 21
PreATP-grasp domain PreATP-grasp domain 22
Fe,Mn superoxide dismutase (SOD), N-terminal domain Fe,Mn superoxide dismutase (SOD), C-terminal domain 21
PX domain CAD & PB1 domains 22
Carbamoyl phosphate synthetase, large subunit connection domain Methylglyoxal synthase-like 22
Chromo domain-like P-loop containing nucleoside triphosphate hydrolases 22
DNA repair protein MutS, domain II DNA repair protein MutS, domain III 22
RING/U-box FYVE/PHD zinc finger 22
SNARE-like SNARE fusion complex 22
Ribosomal L11/L12e N-terminal domain Ribosomal protein L11, C-terminal domain 21
POZ domain Skp1 dimerisation domain-like 21
CBS-domain pair CAD & PB1 domains 22
Cullin homology domain "Winged helix" DNA-binding domain 21
Single hybrid motif Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex 22
PUA domain-like P-loop containing nucleoside triphosphate hydrolases 22
Initiation factor IF2/eIF5b, domain 3 Translation proteins 22
P-loop containing nucleoside triphosphate hydrolases NAD(P)-binding Rossmann-fold domains 22
Glutathione synthetase ATP-binding domain-like Glutathione synthetase ATP-binding domain-like 22
N-terminal, heterodimerisation domain of RBP7 (RpoE) Nucleic acid-binding proteins 21
SH3-domain Ras GEF 22
Class I glutamine amidotransferase-like Ribulose-phoshate binding barrel 21
Acid proteases Acid proteases 22
Protease propeptides/inhibitors Subtilisin-like 22
DPP6 N-terminal domain-like alpha/beta-Hydrolases 22
RNA-binding domain, RBD CCCH zinc finger 22
MurD-like peptide ligases, catalytic domain MurD-like peptide ligases, peptide-binding domain 22
Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like 22
TPR-like "Winged helix" DNA-binding domain 21
(Trans)glycosidases Glycosyl hydrolase domain 22
Nucleotidylyl transferase Ribosomal protein L25-like 22
R1 subunit of ribonucleotide reductase, N-terminal domain PFL-like glycyl radical enzymes 22
t-snare proteins SNARE fusion complex 22
WD40 repeat-like Quinoprotein alcohol dehydrogenase-like 22
PH domain-like "Winged helix" DNA-binding domain 22
Restriction endonuclease-like RuvA domain 2-like 22
Single hybrid motif CoA-dependent acyltransferases 22
PurM N-terminal domain-like PurM C-terminal domain-like 22
DNA repair protein MutS, domain I DNA repair protein MutS, domain II 22
"Winged helix" DNA-binding domain E set domains 22
Nicotinate/Quinolinate PRTase N-terminal domain-like Nicotinate/Quinolinate PRTase C-terminal domain-like 21
Hypothetical protein SAV1430 Fe-S cluster assembly (FSCA) domain-like 22
Glutathione synthetase ATP-binding domain-like Methylglyoxal synthase-like 22
ACT-like ACT-like 22
Acyl-CoA N-acyltransferases (Nat) Acyl-CoA N-acyltransferases (Nat) 11
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase HSP90 C-terminal domain 11
SAICAR synthase-like t-snare proteins 11
RCC1/BLIP-II SH2 domain 11
IlvD/EDD N-terminal domain-like LeuD/IlvD-like 11
E set domains Ankyrin repeat 11
Calcium ATPase, transmembrane domain M P-loop containing nucleoside triphosphate hydrolases 11
WW domain FKBP-like 11
Tetrahydrobiopterin biosynthesis enzymes-like 6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase, HPPK 11
L domain-like UBA-like 11
PreATP-grasp domain P-loop containing nucleoside triphosphate hydrolases 11
Dehydroquinate synthase-like EPT/RTPC-like 11
Amidase signature (AS) enzymes PreATP-grasp domain 11
SH3-domain beta-sandwich domain of Sec23/24 11
PreATP-grasp domain Aldolase 11
Glycoside hydrolase/deacetylase Families 57/38 glycoside transferase middle domain 11
Galactose mutarotase-like (Trans)glycosidases 11
Acetyl-CoA synthetase-like Acetyl-CoA synthetase-like 11
Class II aaRS ABD-related C-terminal domain of ProRS 11
Voltage-gated potassium channels EF-hand 11
RCC1/BLIP-II POZ domain 11
Class II aaRS and biotin synthetases Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) 11
RNA-binding domain, RBD P-loop containing nucleoside triphosphate hydrolases 11
Chromo domain-like Acyl-CoA N-acyltransferases (Nat) 11
ACP-like NAD(P)-binding Rossmann-fold domains 11
DAK1/DegV-like DhaL-like 11
2Fe-2S ferredoxin-like alpha-helical ferredoxin 11
Obg GTP-binding protein N-terminal domain P-loop containing nucleoside triphosphate hydrolases 11
SH3-domain PH domain-like 11
PX domain SNARE fusion complex 11
PreATP-grasp domain ClpP/crotonase 11
TPR-like CheY-like 11
Calponin-homology domain, CH-domain 4Fe-4S ferredoxins 11
Nucleotide-diphospho-sugar transferases Trimeric LpxA-like enzymes 11
SAM/Pointed domain PH domain-like 11
Actin-like ATPase domain CV3147-like 11
Metallo-dependent hydrolases Acyl-CoA N-acyltransferases (Nat) 11
Ribosomal protein L7/12, oligomerisation (N-terminal) domain ClpS-like 11
Cytochrome b5-like heme/steroid binding domain Acyl-CoA N-acyltransferases (Nat) 11
UBC-like UBA-like 11
PurS-like FGAM synthase PurL, linker domain 11
Thiamin diphosphate-binding fold (THDP-binding) Nitrite/Sulfite reductase N-terminal domain-like 11
ENTH/VHS domain SH3-domain 11
UBA-like Chaperone J-domain 11
PK beta-barrel domain-like Phosphoenolpyruvate/pyruvate domain 11
Glutathione synthetase ATP-binding domain-like Aldolase 11
Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 Elongation factor TFIIS domain 2 11
P-loop containing nucleoside triphosphate hydrolases GAF domain-like 11
FAD-linked reductases, C-terminal domain Metallo-dependent phosphatases 11
PH domain-like ArfGap/RecO-like zinc finger 11
Acetyl-CoA synthetase-like NAD(P)-binding Rossmann-fold domains 11
Sec7 domain ARM repeat 11
Methylglyoxal synthase-like Metallo-dependent hydrolases 11
Calponin-homology domain, CH-domain DBL homology domain (DH-domain) 11
Methyl-accepting chemotaxis protein (MCP) signaling domain CheY-like 11
PreATP-grasp domain PH0987 N-terminal domain-like 11
DBL homology domain (DH-domain) CAD & PB1 domains 11
6-phosphogluconate dehydrogenase C-terminal domain-like 6-phosphogluconate dehydrogenase C-terminal domain-like 11
CAD & PB1 domains FAD/NAD(P)-binding domain 11
RCC1/BLIP-II Ribonuclease H-like 11
Chaperone J-domain E set domains 11
Taf5 N-terminal domain-like WD40 repeat-like 11
E set domains AMPKBI-like 11
cAMP-binding domain-like RNI-like 11
ARM repeat FKBP12-rapamycin-binding domain of FKBP-rapamycin-associated protein (FRAP) 11
Translation proteins Translation proteins 11
TPR-like RNI-like 11
Ubiquitin-like AN1-like Zinc finger 11
PH domain-like PH domain-like 11
Ribosomal L27 protein-like Nucleic acid-binding proteins 11
WD40 repeat-like Cysteine-rich domain 11
6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase, HPPK Dihydropteroate synthetase-like 11
FYVE/PHD zinc finger SET domain 11
PRTase-like PRTase-like 11
Methyl-accepting chemotaxis protein (MCP) signaling domain ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 11
Hedgehog/intein (Hint) domain C-terminal domain of alpha and beta subunits of F1 ATP synthase 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) FMN-linked oxidoreductases 11
Terpenoid synthases Terpenoid synthases 11
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 11
Ubiquitin-like Protein kinase-like (PK-like) 11
TGS-like Class II aaRS ABD-related 11
"Winged helix" DNA-binding domain RNA-binding domain, RBD 11
TATA-box binding protein-like DNA-glycosylase 11
TATA-box binding protein-like TATA-box binding protein-like 11
BRCT domain DNA/RNA polymerases 11
Carbamate kinase-like PUA domain-like 11
L domain-like Nucleotide cyclase 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) Alpha subunit of glutamate synthase, C-terminal domain 11
RCC1/BLIP-II Tex N-terminal region-like 11
Carbamoyl phosphate synthetase, small subunit N-terminal domain Metallo-dependent hydrolases 11
GST C-terminal domain-like Ribosomal protein L25-like 11
ATP-dependent DNA ligase DNA-binding domain Nucleic acid-binding proteins 11
Voltage-gated potassium channels Cytochrome P450 11
UBC-like RING/U-box 11
BRCT domain P-loop containing nucleoside triphosphate hydrolases 11
4'-phosphopantetheinyl transferase 4'-phosphopantetheinyl transferase 11
Ubiquitin-like XPC-binding domain 11
PUA domain-like Nucleotidylyl transferase 11
Clathrin adaptor appendage domain Subdomain of clathrin and coatomer appendage domain 11
Ribonuclease H-like HRDC-like 11
FabD/lysophospholipase-like Thioesterase/thiol ester dehydrase-isomerase 11
ARM repeat HIT/MYND zinc finger-like 11
ENTH/VHS domain I/LWEQ domain 11
Chromo domain-like Chromo domain-like 11
Protein kinase-like (PK-like) P-loop containing nucleoside triphosphate hydrolases 11
TPR-like RING/U-box 11
Rap30/74 interaction domains "Winged helix" DNA-binding domain 11
MFS general substrate transporter GST C-terminal domain-like 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) PRTase-like 11
4Fe-4S ferredoxins Formate dehydrogenase/DMSO reductase, domains 1-3 11
PurS-like Class I glutamine amidotransferase-like 11
MIT domain P-loop containing nucleoside triphosphate hydrolases 11
P-loop containing nucleoside triphosphate hydrolases Smc hinge domain 11
Rad51 N-terminal domain-like P-loop containing nucleoside triphosphate hydrolases 11
Fe-only hydrogenase Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 11
Glucocorticoid receptor-like (DNA-binding domain) Glucocorticoid receptor-like (DNA-binding domain) 11
Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 11
Glutathione synthetase ATP-binding domain-like PurM C-terminal domain-like 11
2Fe-2S ferredoxin-like Formate dehydrogenase/DMSO reductase, domains 1-3 11
cAMP-binding domain-like F-box domain 11
Adenine nucleotide alpha hydrolases-like DHS-like NAD/FAD-binding domain 11
Histone-fold Histone-fold 11
Thioredoxin-like P-loop containing nucleoside triphosphate hydrolases 11
Flavoproteins Radical SAM enzymes 11
Calponin-homology domain, CH-domain RGC domain-like 11
PreATP-grasp domain N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE) 11
GST C-terminal domain-like Translational machinery components 11
UBC-like Class II aaRS and biotin synthetases 11
Adenine nucleotide alpha hydrolases-like YjgF-like 11
Metallo-dependent hydrolases FAD-linked reductases, C-terminal domain 11
SET domain SET domain 11
Carbamoyl phosphate synthetase, small subunit N-terminal domain Carbamoyl phosphate synthetase, large subunit connection domain 11
C2 domain (Calcium/lipid-binding domain, CaLB) Hect, E3 ligase catalytic domain 11
Clc chloride channel CBS-domain pair 11
ARM repeat BEACH domain 11
P-loop containing nucleoside triphosphate hydrolases ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 11
WD40 repeat-like Zn-dependent exopeptidases 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) SIS domain 11
Class I glutamine amidotransferase-like ADC synthase 11
Carbamoyl phosphate synthetase, small subunit N-terminal domain Aspartate/ornithine carbamoyltransferase 11
Myosin S1 fragment, N-terminal domain P-loop containing nucleoside triphosphate hydrolases 11
Formate/glycerate dehydrogenase catalytic domain-like ACT-like 11
Amidase signature (AS) enzymes PH0987 N-terminal domain-like 11
PAH2 domain PAH2 domain 11
Chaperone J-domain Sec63 N-terminal domain-like 11
Nitrite/Sulfite reductase N-terminal domain-like Nitrite and sulphite reductase 4Fe-4S domain-like 11
Methyl-accepting chemotaxis protein (MCP) signaling domain Homodimeric domain of signal transducing histidine kinase 11
PH domain-like (Phosphotyrosine protein) phosphatases II 11
Concanavalin A-like lectins/glucanases P-domain of calnexin/calreticulin 11
Folate-binding domain Aminomethyltransferase beta-barrel domain 11
Thioredoxin-like eEF1-gamma domain 11
PH domain-like WD40 repeat-like 11
Amidase signature (AS) enzymes Ankyrin repeat 11
CAD & PB1 domains 4Fe-4S ferredoxins 11
FAD/NAD(P)-binding domain 4Fe-4S ferredoxins 11
Methionyl-tRNA synthetase (MetRS), Zn-domain Nucleotidylyl transferase 11
NAD-binding domain of HMG-CoA reductase Substrate-binding domain of HMG-CoA reductase 11
vWA-like SPOC domain-like 11
FAD-linked reductases, C-terminal domain Fe-S cluster assembly (FSCA) domain-like 11
GroEL apical domain-like SAICAR synthase-like 11
TRAF domain-like Cysteine proteinases 11
Flavoproteins Nitrite/Sulfite reductase N-terminal domain-like 11
Alpha subunit of glutamate synthase, C-terminal domain Nucleotide-binding domain 11
Terpenoid cyclases/Protein prenyltransferases Terpenoid cyclases/Protein prenyltransferases 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) alpha-helical ferredoxin 11
Surp module (SWAP domain) Surp module (SWAP domain) 11
POZ domain POZ domain 11
NTF2-like UBA-like 11
HAD-like BRCT domain 11
Metalloproteases ("zincins"), catalytic domain ARM repeat 11
ArfGap/RecO-like zinc finger P-loop containing nucleoside triphosphate hydrolases 11
PAZ domain Ribonuclease H-like 11
HMA, heavy metal-associated domain Calcium ATPase, transduction domain A 11
Thiamin diphosphate-binding fold (THDP-binding) Nitrite and sulphite reductase 4Fe-4S domain-like 11
Nucleic acid-binding proteins Creatinase/aminopeptidase 11
Thiamin phosphate synthase Ribokinase-like 11
WW domain Hect, E3 ligase catalytic domain 11
alpha/beta-Hydrolases Galactose-binding domain-like 11
Protein kinase-like (PK-like) ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 11
PX domain beta-sandwich domain of Sec23/24 11
FAS1 domain FAS1 domain 11
BAR/IMD domain-like P-loop containing nucleoside triphosphate hydrolases 11
PLC-like phosphodiesterases C2 domain (Calcium/lipid-binding domain, CaLB) 11
Radical SAM enzymes Acyl-CoA N-acyltransferases (Nat) 11
Adenine nucleotide alpha hydrolases-like Argininosuccinate synthetase, C-terminal domain 11
Hypothetical protein c14orf129, hspc210 TPR-like 11
Fe-only hydrogenase NAD(P)-binding Rossmann-fold domains 11
PK beta-barrel domain-like PK C-terminal domain-like 11
Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) ThrRS/AlaRS common domain 11
NAD(P)-binding Rossmann-fold domains 4'-phosphopantetheinyl transferase 11
DBL homology domain (DH-domain) FAD-linked reductases, C-terminal domain 11
Eukaryotic DNA topoisomerase I, N-terminal DNA-binding fragment DNA breaking-rejoining enzymes 11
Tetrahydrobiopterin biosynthesis enzymes-like Dihydropteroate synthetase-like 11
Concanavalin A-like lectins/glucanases Concanavalin A-like lectins/glucanases 11
F-box domain YVTN repeat-like/Quinoprotein amine dehydrogenase 11
PH0987 N-terminal domain-like Single hybrid motif 11
Multidrug efflux transporter AcrB transmembrane domain Multidrug efflux transporter AcrB transmembrane domain 11
HMA, heavy metal-associated domain HAD-like 11
PreATP-grasp domain Cyclophilin-like 11
Ribonuclease H-like RuvA domain 2-like 11
HisI-like ALDH-like 11
HR1 repeat HR1 repeat 11
Regulator of G-protein signaling, RGS PX domain 11
PH domain-like FAD/NAD(P)-binding domain 11
PreATP-grasp domain Obg GTP-binding protein N-terminal domain 11
Double Clp-N motif P-loop containing nucleoside triphosphate hydrolases 11
Galactose-binding domain-like Galactose-binding domain-like 11
Class I glutamine amidotransferase-like Adenine nucleotide alpha hydrolases-like 11
TGS-like ThrRS/AlaRS common domain 11
Multidrug resistance efflux transporter EmrE Nucleotidylyl transferase 11
Staphylococcal nuclease Tudor/PWWP/MBT 11
Quinoprotein alcohol dehydrogenase-like Protein kinase-like (PK-like) 11
Leukotriene A4 hydrolase N-terminal domain ARM repeat 11
RNA-binding domain, RBD Ran binding protein zinc finger-like 11
UBC-like Ribosomal protein S5 domain 2-like 11
Dehydroquinate synthase-like Aminoacid dehydrogenase-like, N-terminal domain 11
PH domain-like P-loop containing nucleoside triphosphate hydrolases 11
Composite domain of metallo-dependent hydrolases Acyl-CoA N-acyltransferases (Nat) 11
Staphylococcal nuclease Staphylococcal nuclease 11
PurS-like PurM C-terminal domain-like 11
SMAD/FHA domain RING/U-box 11
CAD & PB1 domains FAD-linked reductases, C-terminal domain 11
Glucocorticoid receptor-like (DNA-binding domain) GTPase activation domain, GAP 11
N-terminal domain of eukaryotic peptide chain release factor subunit 1, ERF1 Translational machinery components 11
Concanavalin A-like lectins/glucanases PH domain-like 11
Glutathione synthetase ATP-binding domain-like PurM N-terminal domain-like 11
DBL homology domain (DH-domain) FAD/NAD(P)-binding domain 11
ARM repeat Chromo domain-like 11
E set domains Glycosyl hydrolase domain 11
EPT/RTPC-like Aldolase 11
SurE-like Glutathione synthetase ATP-binding domain-like 11
Rudiment single hybrid motif Aldolase 11
Cyclophilin-like PH0987 N-terminal domain-like 11
Glutathione synthetase ATP-binding domain-like Aspartate/ornithine carbamoyltransferase 11
DNA ligase/mRNA capping enzyme, catalytic domain BRCT domain 11
F1F0 ATP synthase subunit C F1F0 ATP synthase subunit C 11
Dcp2 domain-like Nudix 11
PDZ domain-like PDZ domain-like 11
"Winged helix" DNA-binding domain Regulator of G-protein signaling, RGS 11
Cysteine-rich domain Protein kinase-like (PK-like) 11
GST C-terminal domain-like Dom34/Pelota N-terminal domain-like 11
Globin-like Ferredoxin reductase-like, C-terminal NADP-linked domain 11
Concanavalin A-like lectins/glucanases BEACH domain 11
Pre-PUA domain PUA domain-like 11
P-loop containing nucleoside triphosphate hydrolases CheY-like 11
GAF domain-like ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 11
HMA, heavy metal-associated domain HMA, heavy metal-associated domain 11
Dom34/Pelota N-terminal domain-like Translational machinery components 11
Homing endonucleases Homing endonucleases 11
Amidase signature (AS) enzymes Rudiment single hybrid motif 11
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase Type II DNA topoisomerase 11
DNase I-like DNase I-like 11
all-alpha NTP pyrophosphatases ALDH-like 11
Single hybrid motif ClpP/crotonase 11
Glutathione synthetase ATP-binding domain-like P-loop containing nucleoside triphosphate hydrolases 11
PreATP-grasp domain Aspartate/ornithine carbamoyltransferase 11
Glutathione synthetase ATP-binding domain-like post-HMGL domain-like 11
FabD/lysophospholipase-like FMN-linked oxidoreductases 11
Thiamin diphosphate-binding fold (THDP-binding) Flavoproteins 11
PLP-dependent transferases Zn2/Cys6 DNA-binding domain 11
Galactose mutarotase-like Glycosyl hydrolase domain 11
Periplasmic binding protein-like II GlnB-like 11
Arp2/3 complex subunits Arp2/3 complex subunits 11
Nucleotidyltransferase PAP/Archaeal CCA-adding enzyme, C-terminal domain 11
Nqo1 FMN-binding domain-like Nqo1 middle domain-like 11
Carbamate kinase-like Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 11
DNA clamp DNA clamp 11
PH domain-like FAD-linked reductases, C-terminal domain 11
Putative DNA-binding domain Class II aaRS and biotin synthetases 11
Rudiment single hybrid motif ClpP/crotonase 11
Nucleic acid-binding proteins Translational machinery components 11
FMN-linked oxidoreductases Alpha subunit of glutamate synthase, C-terminal domain 11
SAM/Pointed domain Ubiquitin-like 11
"Winged helix" DNA-binding domain CheY-like 11
Glutathione synthetase ATP-binding domain-like Succinyl-CoA synthetase domains 11
Trypsin-like serine proteases Trypsin-like serine proteases 11
Ran binding protein zinc finger-like "Winged helix" DNA-binding domain 11
C2 domain (Calcium/lipid-binding domain, CaLB) Cysteine-rich domain 11
Carbamoyl phosphate synthetase, small subunit N-terminal domain Methylglyoxal synthase-like 11
BRCT domain post-AAA+ oligomerization domain-like 11
FYVE/PHD zinc finger SAICAR synthase-like 11
Activator of Hsp90 ATPase, Aha1 Bet v1-like 11
C2 domain (Calcium/lipid-binding domain, CaLB) WW domain 11
FKBP12-rapamycin-binding domain of FKBP-rapamycin-associated protein (FRAP) Protein kinase-like (PK-like) 11
Dehydroquinate synthase-like Aldolase 11
Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 Zinc beta-ribbon 11
Ras GEF GTPase activation domain, GAP 11
ISP transmembrane anchor ISP domain 11
PreATP-grasp domain PurM N-terminal domain-like 11
P-loop containing nucleoside triphosphate hydrolases Homodimeric domain of signal transducing histidine kinase 11
Clathrin heavy-chain terminal domain ARM repeat 11
Thiolase-like 4'-phosphopantetheinyl transferase 11
Nucleotidylyl transferase P-loop containing nucleoside triphosphate hydrolases 11
NAD(P)-binding Rossmann-fold domains ACT-like 11
MFS general substrate transporter Thioredoxin-like 11
FabD/lysophospholipase-like Thiolase-like 11
DBL homology domain (DH-domain) 4Fe-4S ferredoxins 11
FYVE/PHD zinc finger Homeodomain-like 11
Cysteine-rich domain Cysteine-rich domain 11
Calponin-homology domain, CH-domain EB1 dimerisation domain-like 11
Riboflavin synthase domain-like Riboflavin synthase domain-like 11
HAD-like HAD-like 11
Retrovirus zinc finger-like domains Retrovirus zinc finger-like domains 11
Methylglyoxal synthase-like Aspartate/ornithine carbamoyltransferase 11
RNI-like beta-beta-alpha zinc fingers 11
BAR/IMD domain-like ArfGap/RecO-like zinc finger 11
Phosphoenolpyruvate/pyruvate domain PK C-terminal domain-like 11
EPT/RTPC-like P-loop containing nucleoside triphosphate hydrolases 11
"Winged helix" DNA-binding domain Protein kinase-like (PK-like) 11
Nucleoporin domain "Winged helix" DNA-binding domain 11
RING/U-box Homeodomain-like 11
Ribosomal L27 protein-like Eukaryotic type KH-domain (KH-domain type I) 11
NAD(P)-binding Rossmann-fold domains Thioesterase/thiol ester dehydrase-isomerase 11
EF-hand Mitochondrial carrier 11
Glutathione synthetase ATP-binding domain-like Obg GTP-binding protein N-terminal domain 11
Pyruvate-ferredoxin oxidoreductase, PFOR, domain III Ferredoxin reductase-like, C-terminal NADP-linked domain 11
Acyl-CoA dehydrogenase C-terminal domain-like Acyl-CoA dehydrogenase C-terminal domain-like 11
Glutamine synthetase/guanido kinase GatB/YqeY motif 11
FabD/lysophospholipase-like FabD/lysophospholipase-like 11
Glycoside hydrolase/deacetylase Galactose mutarotase-like 11
HR1 repeat Cysteine-rich domain 11
FAD-linked reductases, C-terminal domain Hypothetical protein SAV1430 11
WD40 repeat-like Cysteine proteinases 11
F-box domain Clavaminate synthase-like 11
S-adenosyl-L-methionine-dependent methyltransferases S-adenosyl-L-methionine-dependent methyltransferases 11
Carbamoyl phosphate synthetase, large subunit connection domain Aspartate/ornithine carbamoyltransferase 11
Ribokinase-like Heme oxygenase-like 11
Aldolase Single hybrid motif 11
GAF domain-like Homodimeric domain of signal transducing histidine kinase 11
CoA-dependent acyltransferases Acetyl-CoA synthetase-like 11
GroEL apical domain-like t-snare proteins 11
Metallo-hydrolase/oxidoreductase Ribosomal protein L10-like 11
Class I glutamine amidotransferase-like GMP synthetase C-terminal dimerisation domain 11
Flavoproteins Nitrite and sulphite reductase 4Fe-4S domain-like 11
EF-hand PLC-like phosphodiesterases 11
PH domain-like CAD & PB1 domains 11
L domain-like DNase I-like 11
PEP carboxykinase N-terminal domain PEP carboxykinase-like 11
Eukaryotic type KH-domain (KH-domain type I) Retrovirus zinc finger-like domains 11
Oligoxyloglucan reducing end-specific cellobiohydrolase Oligoxyloglucan reducing end-specific cellobiohydrolase 11
Zinc beta-ribbon Zinc beta-ribbon 11
RING/U-box RNA-binding domain, RBD 11
SNARE fusion complex SNARE fusion complex 11
DNA polymerase beta, N-terminal domain-like Restriction endonuclease-like 11
FYVE/PHD zinc finger t-snare proteins 11
GAF domain-like CheY-like 11
BEACH domain WD40 repeat-like 11
Class I glutamine amidotransferase-like Aspartate/ornithine carbamoyltransferase 11
HR1 repeat Protein kinase-like (PK-like) 11
RuvA domain 2-like SH2 domain 11
Protein kinase-like (PK-like) Protein kinase-like (PK-like) 11
ARID-like FYVE/PHD zinc finger 11
Class I glutamine amidotransferase-like Class II aaRS and biotin synthetases 11
FAD/NAD(P)-binding domain Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain 11
Ypt/Rab-GAP domain of gyp1p EF-hand 11
vWA-like Cysteine-rich domain 11
Siroheme synthase middle domains-like Tetrapyrrole methylase 11
Class I glutamine amidotransferase-like Methylglyoxal synthase-like 11
Nucleotidyltransferase Poly A polymerase C-terminal region-like 11
SH2 domain Metallo-dependent phosphatases 11
P-loop containing nucleoside triphosphate hydrolases Hedgehog/intein (Hint) domain 11
Nqo1 FMN-binding domain-like Nqo1C-terminal domain-like 11
PurM N-terminal domain-like PurM N-terminal domain-like 11
Protein kinase-like (PK-like) Class II aaRS and biotin synthetases 11
Clavaminate synthase-like FYVE/PHD zinc finger 11
Trypsin-like serine proteases PDZ domain-like 11
PUA domain-like eIF1-like 11
Glutathione synthetase ATP-binding domain-like Metallo-dependent hydrolases 11
N-terminal domain of eukaryotic peptide chain release factor subunit 1, ERF1 L30e-like 11
Homing endonucleases C-terminal domain of alpha and beta subunits of F1 ATP synthase 11
L domain-like NTF2-like 11
WD40 repeat-like HR1 repeat 11
TPR-like Chaperone J-domain 11
Rudiment single hybrid motif P-loop containing nucleoside triphosphate hydrolases 11
CoA-dependent acyltransferases NAD(P)-binding Rossmann-fold domains 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) Nucleotide-binding domain 11
Adenine nucleotide alpha hydrolases-like GMP synthetase C-terminal dimerisation domain 11
Translation initiation factor 2 beta, aIF2beta, N-terminal domain ARM repeat 11
DNase I-like UDP-Glycosyltransferase/glycogen phosphorylase 11
Calponin-homology domain, CH-domain FAD/NAD(P)-binding domain 11
Rudiment single hybrid motif PurM C-terminal domain-like 11
Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain Nucleotidylyl transferase 11
PH domain-like BSD domain-like 11
Aldolase Aminoacid dehydrogenase-like, N-terminal domain 11
PUA domain-like Ribosomal protein S5 domain 2-like 11
Alpha subunit of glutamate synthase, C-terminal domain alpha-helical ferredoxin 11
(Phosphotyrosine protein) phosphatases II Zn2/Cys6 DNA-binding domain 11
Retrovirus zinc finger-like domains RNA-binding domain, RBD 11
Ribosomal protein S5 domain 2-like Type II DNA topoisomerase 11
GST C-terminal domain-like Nucleic acid-binding proteins 11
TPR-like Homodimeric domain of signal transducing histidine kinase 11
FMN-linked oxidoreductases alpha-helical ferredoxin 11
Periplasmic binding protein-like II ACT-like 11
FabD/lysophospholipase-like 4'-phosphopantetheinyl transferase 11
Calponin-homology domain, CH-domain PH domain-like 11
FAD-linked reductases, C-terminal domain 4Fe-4S ferredoxins 11
Glutamine synthetase, N-terminal domain Glutamine synthetase/guanido kinase 11
Globin-like Riboflavin synthase domain-like 11
Dehydroquinate synthase-like NAD(P)-binding Rossmann-fold domains 11
PIN domain-like Nucleic acid-binding proteins 11
SNARE-like P-loop containing nucleoside triphosphate hydrolases 11
Calponin-homology domain, CH-domain CAD & PB1 domains 11
Inhibitor of apoptosis (IAP) repeat Inhibitor of apoptosis (IAP) repeat 11
EF-hand Calponin-homology domain, CH-domain 11
Concanavalin A-like lectins/glucanases ARM repeat 11
Ran binding protein zinc finger-like Ran binding protein zinc finger-like 11
P-loop containing nucleoside triphosphate hydrolases Signal peptide-binding domain 11
P-loop containing nucleoside triphosphate hydrolases Class I glutamine amidotransferase-like 11
ThrRS/AlaRS common domain Class II aaRS ABD-related 11
Lissencephaly-1 protein (Lis-1, PAF-AH alpha) N-terminal domain WD40 repeat-like 11
Ankyrin repeat PH domain-like 11
FabD/lysophospholipase-like NAD(P)-binding Rossmann-fold domains 11
Periplasmic binding protein-like II Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain 11
ARM repeat Formin homology 2 domain (FH2 domain) 11
Ras GEF Ras GEF 11
TPR-like Metallo-dependent phosphatases 11
L30e-like alpha/beta knot 11
Chaperone J-domain HSC20 (HSCB), C-terminal oligomerisation domain 11
Protein kinase-like (PK-like) TPR-like 11
"Winged helix" DNA-binding domain DBL homology domain (DH-domain) 11
Pyruvate-ferredoxin oxidoreductase, PFOR, domain III Riboflavin synthase domain-like 11
CHY zinc finger-like Zinc hairpin stack 11
HMA, heavy metal-associated domain Calcium ATPase, transmembrane domain M 11
RNA-binding domain, RBD DPP6 N-terminal domain-like 11
Class II aaRS and biotin synthetases Anticodon-binding domain of PheRS 11
NAD(P)-binding Rossmann-fold domains Siroheme synthase middle domains-like 11
Rhodanese/Cell cycle control phosphatase Cysteine proteinases 11
Rudiment single hybrid motif post-HMGL domain-like 11
Rudiment single hybrid motif N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE) 11
Zn-binding ribosomal proteins Translation proteins SH3-like domain 11
EF-hand UBA-like 11
Activating enzymes of the ubiquitin-like proteins Activating enzymes of the ubiquitin-like proteins 11
Fibronectin type III BRCT domain 11
PH domain-like GTPase activation domain, GAP 11
N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE) Obg GTP-binding protein N-terminal domain 11
Ubiquitin-like Cysteine proteinases 11
RuvA domain 2-like RuvA domain 2-like 11
Ras GEF PH domain-like 11
DNA mismatch repair protein MutL DNA mismatch repair protein MutL 11
RCC1/BLIP-II RuvA domain 2-like 11
C2 domain (Calcium/lipid-binding domain, CaLB) ARM repeat 11
Cyclin-like Thioesterase/thiol ester dehydrase-isomerase 11
Methionyl-tRNA synthetase (MetRS), Zn-domain Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 11
Ribosomal protein S5 domain 2-like HSP90 C-terminal domain 11
TPR-like GAF domain-like 11
Bet v1-like Actin-like ATPase domain 11
Zn2/Cys6 DNA-binding domain Translation proteins SH3-like domain 11
FAD/NAD(P)-binding domain Hypothetical protein SAV1430 11
RING/U-box TRAF domain-like 11
CHY zinc finger-like RING/U-box 11
Actin depolymerizing proteins Actin depolymerizing proteins 11
Pseudouridine synthase PUA domain-like 11
Formate/glycerate dehydrogenase catalytic domain-like AhpD-like 11
Cadherin-like Cadherin-like 11
Homeodomain-like SH3-domain 11
ATP-dependent DNA ligase DNA-binding domain DNA ligase/mRNA capping enzyme, catalytic domain 11
Nucleotidylyl transferase An anticodon-binding domain of class I aminoacyl-tRNA synthetases 11
SpoIIaa-like cAMP-binding domain-like 11
BAG domain Nucleotidyltransferase 11
Actin depolymerizing proteins SH3-domain 11
beta-sandwich domain of Sec23/24 CAD & PB1 domains 11
alpha/beta-Hydrolases FAD/NAD(P)-binding domain 11
TPR-like ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 11
PurM C-terminal domain-like Class I glutamine amidotransferase-like 11
N-terminal domain of alpha and beta subunits of F1 ATP synthase Homing endonucleases 11
Ankyrin repeat Oxysterol-binding protein-like 11
YbaK/ProRS associated domain Class II aaRS and biotin synthetases 11
Nucleic acid-binding proteins TPR-like 11
Carbamoyl phosphate synthetase, large subunit connection domain Metallo-dependent hydrolases 11
BAG domain Poly A polymerase C-terminal region-like 11
Families 57/38 glycoside transferase middle domain Galactose mutarotase-like 11
Nucleotide-diphospho-sugar transferases ARM repeat 11
Glutathione synthetase ATP-binding domain-like ClpP/crotonase 11
P-loop containing nucleoside triphosphate hydrolases Homing endonucleases 11
Zn2/Cys6 DNA-binding domain Zn2/Cys6 DNA-binding domain 11
N-terminal domain of alpha and beta subunits of F1 ATP synthase Hedgehog/intein (Hint) domain 11
NAD(P)-binding Rossmann-fold domains NAD(P)-binding Rossmann-fold domains 11
Methylglyoxal synthase-like Cytidine deaminase-like 11
EPT/RTPC-like NAD(P)-binding Rossmann-fold domains 11
ClpP/crotonase ClpP/crotonase 11
PreATP-grasp domain PurM C-terminal domain-like 11
ISP domain Actin-like ATPase domain 11
Indigoidine synthase A-like Ribokinase-like 11
Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex CoA-dependent acyltransferases 11
Supernatant protein factor (SPF), C-terminal domain Oxysterol-binding protein-like 11
beta-sandwich domain of Sec23/24 Mob1/phocein 11
PurM C-terminal domain-like PurM C-terminal domain-like 11
YjgF-like YjgF-like 11
Chaperone J-domain beta-beta-alpha zinc fingers 11
Calponin-homology domain, CH-domain FAD-linked reductases, C-terminal domain 11
Glutathione synthetase ATP-binding domain-like Phosphoglycerate mutase-like 11
DNase I-like PH domain-like 11
Kelch motif POZ domain 11
RCC1/BLIP-II Metallo-dependent phosphatases 11
cAMP-binding domain-like FabD/lysophospholipase-like 11
MFS general substrate transporter Protein kinase-like (PK-like) 11
Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain 11
Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) Translation proteins 11
Putative DNA-binding domain Putative DNA-binding domain 11
Tex N-terminal region-like Ribonuclease H-like 11
GST C-terminal domain-like Nucleotidylyl transferase 11
Ribonuclease H-like Metallo-dependent phosphatases 11
Tex N-terminal region-like Metallo-dependent phosphatases 11
EF-hand C2 domain (Calcium/lipid-binding domain, CaLB) 11
Indigoidine synthase A-like Indigoidine synthase A-like 11
PH domain-like UDP-Glycosyltransferase/glycogen phosphorylase 11
FYSH domain Hypothetical protein AF0491, middle domain 11
UBA-like SMR domain-like 11
HMA, heavy metal-associated domain Cu,Zn superoxide dismutase-like 11
(Trans)glycosidases Acyl-CoA N-acyltransferases (Nat) 11
Aminopeptidase/glucanase lid domain Zn-dependent exopeptidases 11
UDP-Glycosyltransferase/glycogen phosphorylase HAD-like 11
NAD(P)-binding Rossmann-fold domains Thiolase-like 11
2Fe-2S ferredoxin-like 4Fe-4S ferredoxins 11
Zinc-binding domain of translation initiation factor 2 beta ARM repeat 11
BRCT domain Lesion bypass DNA polymerase (Y-family), little finger domain 11
VPS9 domain UBA-like 11
GST C-terminal domain-like eEF-1beta-like 11
Six-hairpin glycosidases Six-hairpin glycosidases 11
NagB/RpiA/CoA transferase-like NagB/RpiA/CoA transferase-like 11
FGAM synthase PurL, linker domain PurM N-terminal domain-like 11
RNA-binding domain, RBD ARM repeat 11
Enolase N-terminal domain-like Enolase C-terminal domain-like 11
N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE) P-loop containing nucleoside triphosphate hydrolases 11
PP2C-like Nucleotide cyclase 11
Metallo-dependent hydrolases Nucleotide-binding domain 11
FAD/NAD(P)-binding domain Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain 11
YbaK/ProRS associated domain Class II aaRS ABD-related 11
Protein kinase-like (PK-like) GAF domain-like 11
Amidase signature (AS) enzymes Single hybrid motif 11
FYVE/PHD zinc finger GroEL apical domain-like 11
(Trans)glycosidases Six-hairpin glycosidases 11
Rudiment single hybrid motif PurM N-terminal domain-like 11
Nitrite and sulphite reductase 4Fe-4S domain-like Nitrite and sulphite reductase 4Fe-4S domain-like 11
Dom34/Pelota N-terminal domain-like L30e-like 11
UBA-like Thioredoxin-like 11
ENTH/VHS domain Clathrin adaptor appendage domain 11
Ribonuclease H-like SH2 domain 11
Acyl-CoA N-acyltransferases (Nat) Bromodomain 11
Calponin-homology domain, CH-domain GTPase activation domain, GAP 11
Class I glutamine amidotransferase-like Glutathione synthetase ATP-binding domain-like 11
HAD-like P-loop containing nucleoside triphosphate hydrolases 11
FAD/NAD(P)-binding domain Fe-S cluster assembly (FSCA) domain-like 11
Concanavalin A-like lectins/glucanases WD40 repeat-like 11
Amidase signature (AS) enzymes Glutathione synthetase ATP-binding domain-like 11
Nucleic acid-binding proteins "Winged helix" DNA-binding domain 11
Metallo-hydrolase/oxidoreductase OsmC-like 11
Carbamoyl phosphate synthetase, small subunit N-terminal domain Glutathione synthetase ATP-binding domain-like 11
The spindle assembly checkpoint protein mad2 FYVE/PHD zinc finger 11
FGAM synthase PurL, linker domain Class I glutamine amidotransferase-like 11
Polo-box domain Polo-box domain 11
Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 11
Adenine nucleotide alpha hydrolases-like Actin depolymerizing proteins 11
FYVE/PHD zinc finger Elongation factor TFIIS domain 2 11
alpha-helical ferredoxin Nucleotide-binding domain 11
HMG-box HMG-box 11
post-HMGL domain-like Single hybrid motif 11
alpha/beta-Hydrolases FAD/NAD-linked reductases, dimerisation (C-terminal) domain 11
PAP/OAS1 substrate-binding domain PAP/Archaeal CCA-adding enzyme, C-terminal domain 11
Protein kinase-like (PK-like) Translation proteins SH3-like domain 11
Nucleotide-diphospho-sugar transferases Class II aaRS and biotin synthetases 11
E set domains (Trans)glycosidases 11
Cysteine proteinases Ribonuclease H-like 11
BAR/IMD domain-like GTPase activation domain, GAP 11
L domain-like PP2C-like 11
FMN-linked oxidoreductases Nucleotide-binding domain 11
Class II aaRS and biotin synthetases C-terminal domain of ProRS 11
Glutathione synthetase ATP-binding domain-like N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE) 11
Coiled-coil domain of nucleotide exchange factor GrpE Head domain of nucleotide exchange factor GrpE 11
GTPase activation domain, GAP RGC domain-like 11
PurS-like PurM N-terminal domain-like 11
S-adenosyl-L-methionine-dependent methyltransferases Kelch motif 11
ENTH/VHS domain RNA-binding domain, RBD 11
Carbon-nitrogen hydrolase Adenine nucleotide alpha hydrolases-like 11
UBA-like XPC-binding domain 11
Calcium ATPase, transduction domain A P-loop containing nucleoside triphosphate hydrolases 11
GroES-like GroES-like 11
UBA-like TPR-like 11
Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain 11
Leucine zipper domain YAP1 redox domain 11
Nitrite/Sulfite reductase N-terminal domain-like Nitrite/Sulfite reductase N-terminal domain-like 11
Class I glutamine amidotransferase-like Carbamoyl phosphate synthetase, large subunit connection domain 11
Acetyl-CoA synthetase-like ACP-like 11
P-loop containing nucleoside triphosphate hydrolases SH3-domain 11
ARM repeat Homo-oligomeric flavin-containing Cys decarboxylases, HFCD 11
Thiolase-like TPR-like 11
UBA-like UBA-like 11
Class I glutamine amidotransferase-like Metallo-dependent hydrolases 11
RING/U-box UBA-like 11
Pseudouridine synthase Cytidine deaminase-like 11
Tex N-terminal region-like RuvA domain 2-like 11
NagB/RpiA/CoA transferase-like D-ribose-5-phosphate isomerase (RpiA), lid domain 11
mRNA decapping enzyme DcpS N-terminal domain HIT-like 11
SNARE-like Domain of the SRP/SRP receptor G-proteins 11
P-loop containing nucleoside triphosphate hydrolases Aldolase 11
PurM N-terminal domain-like Class I glutamine amidotransferase-like 11
PreATP-grasp domain Metallo-dependent hydrolases 11
RING/U-box DPP6 N-terminal domain-like 11
Cyclophilin-like Single hybrid motif 11
YbaK/ProRS associated domain C-terminal domain of ProRS 11
S-adenosylmethionine synthetase S-adenosylmethionine synthetase 11
TGS-like Class II aaRS and biotin synthetases 11
Nucleotide-binding domain Metallo-dependent phosphatases 11
UBA-like NSFL1 (p97 ATPase) cofactor p47, SEP domain 11
Histone-fold ARM repeat 11
Subtilisin-like Galactose-binding domain-like 11
P-loop containing nucleoside triphosphate hydrolases PRTase-like 11
SMAD/FHA domain SMAD/FHA domain 11
Nucleotidylyl transferase Alpha-L RNA-binding motif 11
ENTH/VHS domain FYVE/PHD zinc finger 11
Cytochrome c Cytochrome c1 subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase), transmembrane anchor 11
ISP domain Bet v1-like 11
TRAF domain-like TRAF domain-like 11
Glutathione synthetase ATP-binding domain-like PH0987 N-terminal domain-like 11
Amidase signature (AS) enzymes Cyclophilin-like 11
Rhodanese/Cell cycle control phosphatase (Phosphotyrosine protein) phosphatases II 11
L domain-like Zn2/Cys6 DNA-binding domain 11
CofD-like NAD kinase/diacylglycerol kinase-like 11
TPR-like HSP20-like chaperones 11
WD40 repeat-like C2 domain (Calcium/lipid-binding domain, CaLB) 11
HR1 repeat C2 domain (Calcium/lipid-binding domain, CaLB) 11
Ribosomal protein S5 domain 2-like DNA mismatch repair protein MutL 11
HisI-like all-alpha NTP pyrophosphatases 11
CoA-dependent acyltransferases ACP-like 11
PH domain-like Ran binding protein zinc finger-like 11
FYVE/PHD zinc finger Rabenosyn-5 Rab-binding domain-like 11
EPT/RTPC-like Aminoacid dehydrogenase-like, N-terminal domain 11
NAD(P)-binding Rossmann-fold domains Succinyl-CoA synthetase domains 11
Carbamoyl phosphate synthetase, small subunit N-terminal domain PreATP-grasp domain 11
Nucleic acid-binding proteins eIF2alpha middle domain-like 11
NAD(P)-binding Rossmann-fold domains AhpD-like 11
Nucleic acid-binding proteins BRCT domain 11
Zn2/Cys6 DNA-binding domain PYP-like sensor domain (PAS domain) 11
Creatinase/aminopeptidase "Winged helix" DNA-binding domain 11
Kelch motif Kelch motif 11
Protein kinase-like (PK-like) Polo-box domain 11
UBC-like Protein kinase-like (PK-like) 11
Nucleic acid-binding proteins Dom34/Pelota N-terminal domain-like 11
ARM repeat Subdomain of clathrin and coatomer appendage domain 11
GAT-like domain Clathrin adaptor appendage domain 11
FMN-linked oxidoreductases Thioesterase/thiol ester dehydrase-isomerase 11
VPS9 domain Ankyrin repeat 11
UBC-like Endosomal sorting complex assembly domain 11
P-loop containing nucleoside triphosphate hydrolases vWA-like 11
PH domain-like 4Fe-4S ferredoxins 11
ARID-like Clavaminate synthase-like 11
Zn-binding ribosomal proteins HCP-like 11
WD40 repeat-like Ribonuclease H-like 11
OsmC-like Ribosomal protein L10-like 11
Rhodanese/Cell cycle control phosphatase Rhodanese/Cell cycle control phosphatase 11
Supernatant protein factor (SPF), C-terminal domain PH domain-like 11
Eukaryotic initiation factor 4f subunit eIF4g, eIF4e-binding domain ARM repeat 11
Nucleotide-diphospho-sugar transferases Class II aaRS ABD-related 11
Ubiquitin-like Zn-binding ribosomal proteins 11
Rudiment single hybrid motif PH0987 N-terminal domain-like 11
SH3-domain SAM/Pointed domain 11
WW domain FF domain 11
Zinc hairpin stack RING/U-box 11
RNA-binding domain, RBD PABC (PABP) domain 11
Protein kinase-like (PK-like) Homodimeric domain of signal transducing histidine kinase 11
dsRNA-binding domain-like dsRNA-binding domain-like 11
SET domain WW domain 11
CCCH zinc finger alpha/beta-Hydrolases 11
PH domain-like BEACH domain 11
Elongation factor TFIIS domain 2 Zinc beta-ribbon 11
PLP-dependent transferases PLP-dependent transferases 11
Nucleotide-binding domain FAD/NAD(P)-binding domain 11
Eukaryotic RPB5 N-terminal domain RPB5-like RNA polymerase subunit 11
UROD/MetE-like UROD/MetE-like 11
Endosomal sorting complex assembly domain VPS28 C-terminal domain-like 11
Class II aaRS and biotin synthetases Translation proteins 11
Domain of the SRP/SRP receptor G-proteins Signal peptide-binding domain 11
Ribosomal protein L14 Protein kinase-like (PK-like) 11
P-loop containing nucleoside triphosphate hydrolases Microbial and mitochondrial ADK, insert "zinc finger" domain 11
NSFL1 (p97 ATPase) cofactor p47, SEP domain Ubiquitin-like 11
Ubiquinone-binding protein QP-C of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) Clavaminate synthase-like 11
eIF2alpha middle domain-like eIF-2-alpha, C-terminal domain 11
CBS-domain pair Inosine monophosphate dehydrogenase (IMPDH) 11
Class I glutamine amidotransferase-like PreATP-grasp domain 11
SH3-domain Cysteine proteinases 11
Prokaryotic type KH domain (KH-domain type II) Ribosomal protein S3 C-terminal domain 11
Ribulose-phoshate binding barrel Tryptophan synthase beta subunit-like PLP-dependent enzymes 11
UDP-Glycosyltransferase/glycogen phosphorylase UDP-Glycosyltransferase/glycogen phosphorylase 11
C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase WD40 repeat-like 11
TPR-like F-box domain 11
Rudiment single hybrid motif Obg GTP-binding protein N-terminal domain 11
FF domain FF domain 11
Hedgehog/intein (Hint) domain Homing endonucleases 11
Chaperone J-domain CSL zinc finger 11
Metallo-dependent phosphatases 5'-nucleotidase (syn. UDP-sugar hydrolase), C-terminal domain 11
Aldolase NAD(P)-binding Rossmann-fold domains 11
Thiamin pyrophosphokinase, catalytic domain Thiamin pyrophosphokinase, substrate-binding domain 11
Nucleic acid-binding proteins L30e-like 11
WW domain WW domain 11
Dehydroquinate synthase-like P-loop containing nucleoside triphosphate hydrolases 11
PreATP-grasp domain post-HMGL domain-like 11
Ribonuclease H-like Ribonuclease H-like 11
Carbamate kinase-like ACT-like 11
Thioredoxin-like ERP29 C domain-like 11
Nqo1 middle domain-like Nqo1C-terminal domain-like 11
Acyl-CoA dehydrogenase NM domain-like Acyl-CoA dehydrogenase C-terminal domain-like 11
DPP6 N-terminal domain-like ATP synthase (F1-ATPase), gamma subunit 11
FGAM synthase PurL, linker domain PurM C-terminal domain-like 11
Metallo-dependent hydrolases Aspartate/ornithine carbamoyltransferase 11
GST C-terminal domain-like L30e-like 11
Nucleic acid-binding proteins eIF-2-alpha, C-terminal domain 11
Metalloproteases ("zincins"), catalytic domain Mannose-binding lectins 11
Tex N-terminal region-like SH2 domain 11
RuvA domain 2-like Metallo-dependent phosphatases 11
Carbamate kinase-like NAD(P)-binding Rossmann-fold domains 11
Cysteine proteinases UBA-like 11
Nucleotidylyl transferase Nucleotidylyl transferase 11
PLP-binding barrel Alanine racemase C-terminal domain-like 11
L9 N-domain-like Ribonuclease H-like 11

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