SUPERFAMILY 1.75 HMM library and genome assignments server

Domain combination pairs in Pelobacter carbinolicus DSM 2380

All pairs of domain combinations at the superfamily level are listed here.
The identification of domain pairs does not account for the possibility of non-contiguous domains. Inserted, or interlaced, domains are seen as having a simple pair ordering.

  • For a list of unique full length architectures for this genome click here (can be slow).
Adjacent domain pairs graph

Graph of adjacent domain pairs.


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Domain combination pairs

708 domain combination pairs.
Click on a column heading to sort that column, or the 'View' button to see domain architetures for that domain pair combination.

Superfamily (N) Superfamily (C) Number of occurrances Number unique
Homodimeric domain of signal transducing histidine kinase ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 2819
P-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases 2311
PYP-like sensor domain (PAS domain) Nucleotide cyclase 1813
P-loop containing nucleoside triphosphate hydrolases Homeodomain-like 187
PYP-like sensor domain (PAS domain) PYP-like sensor domain (PAS domain) 1716
PYP-like sensor domain (PAS domain) ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 1612
Nucleotide cyclase EAL domain-like 1510
PYP-like sensor domain (PAS domain) Homodimeric domain of signal transducing histidine kinase 1410
PYP-like sensor domain (PAS domain) EAL domain-like 138
Homeodomain-like Ribonuclease H-like 132
CheY-like P-loop containing nucleoside triphosphate hydrolases 124
Actin-like ATPase domain Actin-like ATPase domain 123
P-loop containing nucleoside triphosphate hydrolases Translation proteins 117
Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) 116
HAMP domain-like ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 117
Thiamin diphosphate-binding fold (THDP-binding) TK C-terminal domain-like 115
CheY-like Homeodomain-like 113
NAD(P)-binding Rossmann-fold domains Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 115
TPR-like TPR-like 117
CheY-like Nucleotide cyclase 108
CheY-like C-terminal effector domain of the bipartite response regulators 91
HAMP domain-like Homodimeric domain of signal transducing histidine kinase 95
Multidrug efflux transporter AcrB transmembrane domain Multidrug efflux transporter AcrB transmembrane domain 93
P-loop containing nucleoside triphosphate hydrolases Ribosomal protein S5 domain 2-like 95
NAD(P)-binding Rossmann-fold domains 6-phosphogluconate dehydrogenase C-terminal domain-like 94
Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains Multidrug efflux transporter AcrB transmembrane domain 72
"Winged helix" DNA-binding domain Periplasmic binding protein-like II 71
Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains Multidrug efflux transporter AcrB transmembrane domain 72
Nqo1 FMN-binding domain-like Nqo1C-terminal domain-like 74
Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains 72
PreATP-grasp domain Glutathione synthetase ATP-binding domain-like 75
Nqo1 middle domain-like Nqo1C-terminal domain-like 74
Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains 72
ACT-like ACT-like 74
Homeodomain-like Tetracyclin repressor-like, C-terminal domain 71
Nqo1 FMN-binding domain-like Nqo1 middle domain-like 74
Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains 72
MurD-like peptide ligases, catalytic domain MurD-like peptide ligases, peptide-binding domain 63
N-terminal domain of alpha and beta subunits of F1 ATP synthase P-loop containing nucleoside triphosphate hydrolases 61
Nucleotidylyl transferase Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 65
Mechanosensitive channel protein MscS (YggB), transmembrane region Sm-like ribonucleoproteins 63
Sensory domain-like Methyl-accepting chemotaxis protein (MCP) signaling domain 63
N-terminal domain of alpha and beta subunits of F1 ATP synthase C-terminal domain of alpha and beta subunits of F1 ATP synthase 61
P-loop containing nucleoside triphosphate hydrolases C-terminal domain of alpha and beta subunits of F1 ATP synthase 61
FAD/NAD(P)-binding domain FAD/NAD(P)-binding domain 64
Translation proteins EF-G C-terminal domain-like 63
Phosphoglucomutase, first 3 domains Phosphoglucomutase, first 3 domains 64
Formate/glycerate dehydrogenase catalytic domain-like NAD(P)-binding Rossmann-fold domains 62
P-loop containing nucleoside triphosphate hydrolases EF-G C-terminal domain-like 63
P-loop containing nucleoside triphosphate hydrolases MOP-like 62
EspE N-terminal domain-like P-loop containing nucleoside triphosphate hydrolases 62
CheY-like PYP-like sensor domain (PAS domain) 65
Phosphoglucomutase, first 3 domains Phosphoglucomutase, C-terminal domain 64
2Fe-2S ferredoxin-like 4Fe-4S ferredoxins 63
Transposase IS200-like TrpR-like 52
Mechanosensitive channel protein MscS (YggB), transmembrane region Mechanosensitive channel protein MscS (YggB), C-terminal domain 52
Nqo1C-terminal domain-like 4Fe-4S ferredoxins 52
Cobalamin (vitamin B12)-binding domain Radical SAM enzymes 54
alpha-helical ferredoxin Nucleotide-binding domain 54
lambda repressor-like DNA-binding domains RmlC-like cupins 51
Sm-like ribonucleoproteins Mechanosensitive channel protein MscS (YggB), C-terminal domain 52
FAD/NAD(P)-binding domain FAD/NAD-linked reductases, dimerisation (C-terminal) domain 54
Triger factor/SurA peptide-binding domain-like FKBP-like 54
Sigma2 domain of RNA polymerase sigma factors Sigma3 and sigma4 domains of RNA polymerase sigma factors 53
HAD-like Calcium ATPase, transmembrane domain M 54
Homodimeric domain of signal transducing histidine kinase CheY-like 55
Aldehyde ferredoxin oxidoreductase, N-terminal domain Aldehyde ferredoxin oxidoreductase, C-terminal domains 51
Nucleic acid-binding proteins Nucleic acid-binding proteins 54
Calcium ATPase, transduction domain A Calcium ATPase, transmembrane domain M 54
4Fe-4S ferredoxins Fe-only hydrogenase 53
Nqo1 FMN-binding domain-like 4Fe-4S ferredoxins 52
LuxS/MPP-like metallohydrolase LuxS/MPP-like metallohydrolase 53
P-loop containing nucleoside triphosphate hydrolases post-AAA+ oligomerization domain-like 52
Nqo1 middle domain-like 4Fe-4S ferredoxins 52
EF-G C-terminal domain-like EF-G C-terminal domain-like 52
Calcium ATPase, transduction domain A HAD-like 54
Aminoacid dehydrogenase-like, N-terminal domain NAD(P)-binding Rossmann-fold domains 52
PUA domain-like P-loop containing nucleoside triphosphate hydrolases 42
4Fe-4S ferredoxins P-loop containing nucleoside triphosphate hydrolases 42
PurM N-terminal domain-like PurM C-terminal domain-like 42
Phosphohistidine domain Phosphoenolpyruvate/pyruvate domain 44
NAD(P)-binding Rossmann-fold domains TrkA C-terminal domain-like 44
CheY-like GAF domain-like 43
Nucleotidyltransferase Poly A polymerase C-terminal region-like 44
GAF domain-like ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 44
EF-G C-terminal domain-like Ribosomal protein S5 domain 2-like 42
PreATP-grasp domain Rudiment single hybrid motif 42
Class II aaRS and biotin synthetases Class II aaRS ABD-related 43
PLP-binding barrel Alanine racemase C-terminal domain-like 42
Glutathione synthetase ATP-binding domain-like Rudiment single hybrid motif 42
4Fe-4S ferredoxins Formate dehydrogenase/DMSO reductase, domains 1-3 43
Thiamin diphosphate-binding fold (THDP-binding) DHS-like NAD/FAD-binding domain 41
Nucleic acid-binding proteins Class II aaRS and biotin synthetases 43
Multidrug resistance efflux transporter EmrE Multidrug resistance efflux transporter EmrE 42
Nitrite/Sulfite reductase N-terminal domain-like Nitrite and sulphite reductase 4Fe-4S domain-like 43
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase CheY-like 44
Translation proteins EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 43
CheY-like EAL domain-like 43
PUA domain-like Ribosomal protein S5 domain 2-like 42
Histidine-containing phosphotransfer domain, HPT domain ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 44
GAF domain-like P-loop containing nucleoside triphosphate hydrolases 42
P-loop containing nucleoside triphosphate hydrolases EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 43
Formate dehydrogenase/DMSO reductase, domains 1-3 ADC-like 32
2Fe-2S ferredoxin-like Formate dehydrogenase/DMSO reductase, domains 1-3 32
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase Ribosomal protein S5 domain 2-like 33
P-loop containing nucleoside triphosphate hydrolases "Winged helix" DNA-binding domain 33
Lysozyme-like beta-lactamase/transpeptidase-like 33
Ferritin-like Rubredoxin-like 31
2Fe-2S ferredoxin-like Fe-only hydrogenase 31
PDZ domain-like PDZ domain-like 33
Homeodomain-like Homeodomain-like 31
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase CheW-like 33
Phospholipase D/nuclease Phospholipase D/nuclease 33
P-loop containing nucleoside triphosphate hydrolases Class I glutamine amidotransferase-like 32
HAMP domain-like PYP-like sensor domain (PAS domain) 32
Phage tail proteins Phage tail proteins 33
ACT-like Nucleotidyltransferase 33
GAF domain-like Homeodomain-like 31
GAF domain-like Nucleotide cyclase 32
NAD(P)-binding Rossmann-fold domains ACT-like 32
Histidine-containing phosphotransfer domain, HPT domain CheW-like 33
Alpha-L RNA-binding motif Pseudouridine synthase 31
CheY-like CheY-like 33
Thiamin diphosphate-binding fold (THDP-binding) 4Fe-4S ferredoxins 32
Riboflavin synthase domain-like Ferredoxin reductase-like, C-terminal NADP-linked domain 32
ABC transporter transmembrane region P-loop containing nucleoside triphosphate hydrolases 31
PYP-like sensor domain (PAS domain) GAF domain-like 33
PYP-like sensor domain (PAS domain) P-loop containing nucleoside triphosphate hydrolases 32
Double Clp-N motif P-loop containing nucleoside triphosphate hydrolases 31
OMPA-like TSP type-3 repeat 32
Creatinase/prolidase N-terminal domain Creatinase/aminopeptidase 31
Phage tail proteins gp5 N-terminal domain-like 33
Thiolase-like Thiolase-like 31
GroES-like NAD(P)-binding Rossmann-fold domains 31
Glutathione synthetase ATP-binding domain-like Phosphohistidine domain 33
Nicotinate/Quinolinate PRTase N-terminal domain-like Nicotinate/Quinolinate PRTase C-terminal domain-like 31
cAMP-binding domain-like "Winged helix" DNA-binding domain 31
Sigma3 and sigma4 domains of RNA polymerase sigma factors Sigma3 and sigma4 domains of RNA polymerase sigma factors 32
Zn-dependent exopeptidases Bacterial exopeptidase dimerisation domain 31
Nucleotidyltransferase Nucleotidyltransferase substrate binding subunit/domain 33
ValRS/IleRS/LeuRS editing domain Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 33
Translation proteins Ribosomal protein S5 domain 2-like 31
Translation proteins SH3-like domain Nucleic acid-binding proteins 32
TrkA C-terminal domain-like TrkA C-terminal domain-like 32
ValRS/IleRS/LeuRS editing domain Nucleotidylyl transferase 33
Pyruvate-ferredoxin oxidoreductase, PFOR, domain III 4Fe-4S ferredoxins 32
PYP-like sensor domain (PAS domain) Homeodomain-like 32
Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like 32
Metallo-hydrolase/oxidoreductase Flavoproteins 31
Homodimeric domain of signal transducing histidine kinase Histidine-containing phosphotransfer domain, HPT domain 33
RuvA domain 2-like Nucleic acid-binding proteins 33
Trypsin-like serine proteases PDZ domain-like 33
Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain Phosphoenolpyruvate/pyruvate domain 22
N-terminal nucleophile aminohydrolases (Ntn hydrolases) SIS domain 21
4Fe-4S ferredoxins ADC-like 21
MurCD N-terminal domain MurD-like peptide ligases, catalytic domain 21
FMN-binding split barrel UbiD C-terminal domain-like 22
PUA domain-like S-adenosyl-L-methionine-dependent methyltransferases 21
Thioredoxin-like Nqo1 FMN-binding domain-like 22
FAD/NAD(P)-binding domain Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain 22
Ribonuclease H-like DNA/RNA polymerases 22
FMN-linked oxidoreductases Alpha subunit of glutamate synthase, C-terminal domain 21
HSP40/DnaJ peptide-binding domain HSP40/DnaJ peptide-binding domain 22
4Fe-4S ferredoxins Radical SAM enzymes 21
SirA-like DsrEFH-like 22
Nucleotidyltransferase TGS-like 22
Aconitase iron-sulfur domain LeuD/IlvD-like 22
EPT/RTPC-like EPT/RTPC-like 21
HAMP domain-like Nucleotide cyclase 22
MurCD N-terminal domain MurD-like peptide ligases, peptide-binding domain 21
Penicillin binding protein dimerisation domain beta-lactamase/transpeptidase-like 22
DNA repair protein MutS, domain III P-loop containing nucleoside triphosphate hydrolases 22
Thioredoxin-like Nqo1C-terminal domain-like 22
5' to 3' exonuclease, C-terminal subdomain Ribonuclease H-like 22
HD-domain/PDEase-like TGS-like 22
Metallo-dependent hydrolases Composite domain of metallo-dependent hydrolases 22
Terpenoid cyclases/Protein prenyltransferases Terpenoid cyclases/Protein prenyltransferases 22
PIN domain-like Ribonuclease H-like 22
CBS-domain pair DHH phosphoesterases 22
Calcium ATPase, transduction domain A Metal cation-transporting ATPase, ATP-binding domain N 21
Ribosomal protein S5 domain 2-like Ribonuclease PH domain 2-like 22
ACT-like Nucleotidyltransferase substrate binding subunit/domain 22
Glutathione synthetase ATP-binding domain-like Phosphoenolpyruvate/pyruvate domain 22
NagB/RpiA/CoA transferase-like NagB/RpiA/CoA transferase-like 21
CheY-like PilZ domain-like 21
Formyltransferase FMT C-terminal domain-like 21
Nucleic acid-binding proteins P-loop containing nucleoside triphosphate hydrolases 22
Radical SAM enzymes Radical SAM enzymes 21
Oxidoreductase molybdopterin-binding domain Tetrapyrrole methylase 21
Serine metabolism enzymes domain ACT-like 21
Metal cation-transporting ATPase, ATP-binding domain N Calcium ATPase, transmembrane domain M 21
FAD-binding/transporter-associated domain-like FAD-linked oxidases, C-terminal domain 21
Nucleotide-diphospho-sugar transferases Trimeric LpxA-like enzymes 22
Cation efflux protein transmembrane domain-like Cation efflux protein cytoplasmic domain-like 22
MurE/MurF N-terminal domain MurD-like peptide ligases, catalytic domain 21
Nucleotide-diphospho-sugar transferases RmlC-like cupins 21
Chaperone J-domain HSP40/DnaJ peptide-binding domain 22
Chemotaxis receptor methyltransferase CheR, N-terminal domain S-adenosyl-L-methionine-dependent methyltransferases 21
tRNA-binding arm Class II aaRS and biotin synthetases 21
DnaK suppressor protein DksA, alpha-hairpin domain Glucocorticoid receptor-like (DNA-binding domain) 21
Metal cation-transporting ATPase, ATP-binding domain N HAD-like 21
P-loop containing nucleoside triphosphate hydrolases TPR-like 22
Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain Phosphohistidine domain 22
"Winged helix" DNA-binding domain GAF domain-like 21
MetI-like MetI-like 22
gp5 N-terminal domain-like Phage fibre proteins 22
NAD(P)-binding Rossmann-fold domains UDP-glucose/GDP-mannose dehydrogenase C-terminal domain 21
HD-domain/PDEase-like Nucleotidyltransferase 22
EPT/RTPC-like RNA 3'-terminal phosphate cyclase, RPTC, insert domain 21
ThrRS/AlaRS common domain Class II aaRS and biotin synthetases 22
NAD(P)-binding Rossmann-fold domains Serine metabolism enzymes domain 21
TK C-terminal domain-like 4Fe-4S ferredoxins 21
HAMP domain-like CheY-like 22
Adenine nucleotide alpha hydrolases-like Adenine nucleotide alpha hydrolases-like 21
Nucleic acid-binding proteins S-adenosyl-L-methionine-dependent methyltransferases 21
TK C-terminal domain-like Pyruvate-ferredoxin oxidoreductase, PFOR, domain III 21
"Winged helix" DNA-binding domain "Winged helix" DNA-binding domain 22
Aldolase 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain 21
FAD/NAD(P)-binding domain Rhodanese/Cell cycle control phosphatase 22
Nucleotide-binding domain Nucleotide-binding domain 22
FAD/NAD-linked reductases, dimerisation (C-terminal) domain Rhodanese/Cell cycle control phosphatase 22
MurE/MurF N-terminal domain MurD-like peptide ligases, peptide-binding domain 21
Oxidoreductase molybdopterin-binding domain Oxidoreductase molybdopterin-binding domain 21
6-phosphogluconate dehydrogenase C-terminal domain-like UDP-glucose/GDP-mannose dehydrogenase C-terminal domain 21
Clc chloride channel CBS-domain pair 21
2Fe-2S ferredoxin-like ADC-like 21
Phage tail proteins Phage fibre proteins 22
Thioredoxin-like Nqo1 middle domain-like 22
Formate/glycerate dehydrogenase catalytic domain-like ACT-like 21
OMPA-like OmpA-like 21
P-loop containing nucleoside triphosphate hydrolases FtsH protease domain-like 21
N-terminal nucleophile aminohydrolases (Ntn hydrolases) Alpha subunit of glutamate synthase, C-terminal domain 21
N-terminal nucleophile aminohydrolases (Ntn hydrolases) FMN-linked oxidoreductases 21
Homodimeric domain of signal transducing histidine kinase CheW-like 22
FMN-linked oxidoreductases FAD/NAD(P)-binding domain 22
GAF domain-like Homodimeric domain of signal transducing histidine kinase 22
TSP type-3 repeat OmpA-like 21
Single hybrid motif CoA-dependent acyltransferases 22
Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain 22
CBS-domain pair FAD-binding/transporter-associated domain-like 21
Formate/glycerate dehydrogenase catalytic domain-like Serine metabolism enzymes domain 21
Radical SAM enzymes "Helical backbone" metal receptor 21
"Winged helix" DNA-binding domain S-adenosyl-L-methionine-dependent methyltransferases 21
FAD/NAD(P)-binding domain Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain 22
PDZ domain-like ClpP/crotonase 21
PIN domain-like 5' to 3' exonuclease, C-terminal subdomain 22
4Fe-4S ferredoxins FMN-dependent nitroreductase-like 21
Thiamin diphosphate-binding fold (THDP-binding) Pyruvate-ferredoxin oxidoreductase, PFOR, domain III 21
Ferritin-like HAD-like 11
Restriction endonuclease-like "Winged helix" DNA-binding domain 11
PreATP-grasp domain Single hybrid motif 11
Ribonuclease H-like RuvA domain 2-like 11
GAF domain-like EAL domain-like 11
CheY-like Histidine-containing phosphotransfer domain, HPT domain 11
(Phosphotyrosine protein) phosphatases II Cysteine proteinases 11
RuvA domain 2-like BRCT domain 11
HD-domain/PDEase-like Nucleotide cyclase 11
DeoB insert domain-like Alkaline phosphatase-like 11
"Winged helix" DNA-binding domain Chorismate lyase-like 11
Heat shock protein 70kD (HSP70), peptide-binding domain Heat shock protein 70kD (HSP70), C-terminal subdomain 11
Alpha subunit of glutamate synthase, C-terminal domain FAD/NAD(P)-binding domain 11
HprK N-terminal domain-like CBS-domain pair 11
Cobalamin (vitamin B12)-binding domain TPR-like 11
Nucleic acid-binding proteins DNA helicase RuvA subunit, C-terminal domain 11
FAD-binding/transporter-associated domain-like Uridine diphospho-N-Acetylenolpyruvylglucosamine reductase, MurB, C-terminal domain 11
Iron-dependent repressor protein, dimerization domain C-terminal domain of transcriptional repressors 11
DNA repair protein MutS, domain II P-loop containing nucleoside triphosphate hydrolases 11
HRDC-like HRDC-like 11
L9 N-domain-like Ribosomal protein L9 C-domain 11
EspE N-terminal domain-like EspE N-terminal domain-like 11
NAD(P)-binding Rossmann-fold domains Tetrapyrrole methylase 11
Methylated DNA-protein cysteine methyltransferase domain Methylated DNA-protein cysteine methyltransferase, C-terminal domain 11
Insert subdomain of RNA polymerase alpha subunit C-terminal domain of RNA polymerase alpha subunit 11
Prokaryotic type KH domain (KH-domain type II) Ribosomal protein S3 C-terminal domain 11
HprK N-terminal domain-like DHH phosphoesterases 11
Chorismate mutase II Periplasmic binding protein-like II 11
Tryptophan synthase beta subunit-like PLP-dependent enzymes ACT-like 11
HMA, heavy metal-associated domain HMA, heavy metal-associated domain 11
Aldolase Single hybrid motif 11
CO dehydrogenase ISP C-domain like CO dehydrogenase molybdoprotein N-domain-like 11
Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 11
P-loop containing nucleoside triphosphate hydrolases TRCF domain-like 11
4Fe-4S ferredoxins PYP-like sensor domain (PAS domain) 11
Peptide methionine sulfoxide reductase Mss4-like 11
Ribosomal L11/L12e N-terminal domain Ribosomal protein L11, C-terminal domain 11
Translation initiation factor IF3, N-terminal domain Translation initiation factor IF3, C-terminal domain 11
CBS-domain pair Inosine monophosphate dehydrogenase (IMPDH) 11
Periplasmic binding protein-like II Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain 11
CheW-like CheW-like 11
GreA transcript cleavage protein, N-terminal domain FKBP-like 11
Translation proteins Initiation factor IF2/eIF5b, domain 3 11
Glutathione synthetase ATP-binding domain-like Succinyl-CoA synthetase domains 11
CheW-like CheY-like 11
Sensory domain-like PYP-like sensor domain (PAS domain) 11
GAF domain-like Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain 11
ThrRS/AlaRS common domain Class II aaRS ABD-related 11
Class II aaRS and biotin synthetases Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) 11
Chaperone J-domain DnaJ/Hsp40 cysteine-rich domain 11
Cupredoxins Cytochrome c 11
Sporulation related repeat Cysteine proteinases 11
Copper amine oxidase, domain N Zn-dependent exopeptidases 11
Cytidine deaminase-like Dihydrofolate reductase-like 11
NAD(P)-linked oxidoreductase alpha-helical ferredoxin 11
C-terminal UvrC-binding domain of UvrB RuvA domain 2-like 11
Zinc beta-ribbon DNA primase core 11
PUA domain-like alpha/beta knot 11
P-loop containing nucleoside triphosphate hydrolases Pre-protein crosslinking domain of SecA 11
CorA soluble domain-like Magnesium transport protein CorA, transmembrane region 11
Quinoprotein alcohol dehydrogenase-like MetI-like 11
Fe-only hydrogenase Homeodomain-like 11
Sensory domain-like HAMP domain-like 11
Trm112p-like S-adenosyl-L-methionine-dependent methyltransferases 11
Sensory domain-like Nucleotide cyclase 11
Glutamyl tRNA-reductase catalytic, N-terminal domain Glutamyl tRNA-reductase dimerization domain 11
MgtE N-terminal domain-like CBS-domain pair 11
Alpha-L RNA-binding motif S-adenosyl-L-methionine-dependent methyltransferases 11
Nucleotidylyl transferase Riboflavin kinase-like 11
Class II aaRS and biotin synthetases GAD domain-like 11
Class I glutamine amidotransferase-like Adenine nucleotide alpha hydrolases-like 11
Rhodanese/Cell cycle control phosphatase P-loop containing nucleoside triphosphate hydrolases 11
S13-like H2TH domain Glucocorticoid receptor-like (DNA-binding domain) 11
FAD/NAD(P)-binding domain alpha-helical ferredoxin 11
R1 subunit of ribonucleotide reductase, N-terminal domain PFL-like glycyl radical enzymes 11
DNA/RNA polymerases Lesion bypass DNA polymerase (Y-family), little finger domain 11
Nqo1C-terminal domain-like alpha-helical ferredoxin 11
YajQ-like YajQ-like 11
Ribonuclease PH domain 2-like Nucleic acid-binding proteins 11
Homocysteine S-methyltransferase Cobalamin (vitamin B12)-binding domain 11
PLP-dependent transferases Class I glutamine amidotransferase-like 11
S-adenosyl-L-methionine-dependent methyltransferases Putative methyltransferase TM0872, insert domain 11
Ribosomal protein L6 Ribosomal protein L6 11
YWTD domain Putative isomerase YbhE 11
4Fe-4S ferredoxins Homeodomain-like 11
"Winged helix" DNA-binding domain NagB/RpiA/CoA transferase-like 11
TPR-like HCP-like 11
FAD/NAD(P)-binding domain HI0933 insert domain-like 11
P-loop containing nucleoside triphosphate hydrolases HRDC-like 11
Nucleotide-diphospho-sugar transferases Phosphoglucomutase, first 3 domains 11
lambda repressor-like DNA-binding domains Periplasmic binding protein-like II 11
Leukotriene A4 hydrolase N-terminal domain Metalloproteases ("zincins"), catalytic domain 11
"Winged helix" DNA-binding domain NAD(P)-binding Rossmann-fold domains 11
Glutathione synthetase ATP-binding domain-like Carbamoyl phosphate synthetase, large subunit connection domain 11
Eukaryotic type KH-domain (KH-domain type I) HD-domain/PDEase-like 11
2,3-Bisphosphoglycerate-independent phosphoglycerate mutase, substrate-binding domain Alkaline phosphatase-like 11
Nqo1 FMN-binding domain-like alpha-helical ferredoxin 11
Zinc beta-ribbon Prokaryotic SH3-related domain 11
N-utilization substance G protein NusG, N-terminal domain Translation proteins SH3-like domain 11
Nitrite/Sulfite reductase N-terminal domain-like ISP domain 11
Nucleic acid-binding proteins Putative DNA-binding domain 11
Glutathione synthetase ATP-binding domain-like post-HMGL domain-like 11
GAF domain-like HD-domain/PDEase-like 11
PreATP-grasp domain PreATP-grasp domain 11
GroEL-intermediate domain like GroEL apical domain-like 11
FAD/NAD(P)-binding domain DsrEFH-like 11
TGS-like ACT-like 11
GAF domain-like Phosphohistidine domain 11
PGBD-like L,D-transpeptidase catalytic domain-like 11
Fe-S cluster assembly (FSCA) domain-like P-loop containing nucleoside triphosphate hydrolases 11
Pectin lyase-like Autotransporter 11
Nucleotide-diphospho-sugar transferases Phosphoglucomutase, C-terminal domain 11
Class II aaRS and biotin synthetases C-terminal domain of transcriptional repressors 11
YWTD domain C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase 11
GAF domain-like PilZ domain-like 11
Poly A polymerase C-terminal region-like ACT-like 11
Heme-dependent peroxidases Heme-dependent peroxidases 11
Transcription factor NusA, N-terminal domain Prokaryotic type KH domain (KH-domain type II) 11
EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain "Winged helix" DNA-binding domain 11
P-loop containing nucleoside triphosphate hydrolases Signal peptide-binding domain 11
Homocysteine S-methyltransferase Dihydropteroate synthetase-like 11
GIY-YIG endonuclease C-terminal UvrC-binding domain of UvrB 11
Carbamate kinase-like ACT-like 11
N-terminal domain of DnaB helicase P-loop containing nucleoside triphosphate hydrolases 11
Translation proteins Translation proteins 11
Zinc beta-ribbon Zinc beta-ribbon 11
Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) Translation proteins 11
TPR-like Protein prenylyltransferase 11
HCP-like HCP-like 11
Ribonuclease PH domain 2-like Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 11
NAD(P)-binding Rossmann-fold domains Siroheme synthase middle domains-like 11
N-terminal domain of MutM-like DNA repair proteins Glucocorticoid receptor-like (DNA-binding domain) 11
Nucleotidyltransferase substrate binding subunit/domain Nucleotidyltransferase substrate binding subunit/domain 11
Nqo5-like HydB/Nqo4-like 11
Adhesin YadA, collagen-binding domain Pili subunits 11
TGS-like Class II aaRS ABD-related 11
post-HMGL domain-like Single hybrid motif 11
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase HSP90 C-terminal domain 11
NAD(P)-binding Rossmann-fold domains LDH C-terminal domain-like 11
NAD(P)-binding Rossmann-fold domains 1-deoxy-D-xylulose-5-phosphate reductoisomerase, C-terminal domain 11
all-alpha NTP pyrophosphatases all-alpha NTP pyrophosphatases 11
Metallo-dependent hydrolases Radical SAM enzymes 11
P-loop containing nucleoside triphosphate hydrolases Helical scaffold and wing domains of SecA 11
TTHA1013/TTHA0281-like Ribbon-helix-helix 11
HMA, heavy metal-associated domain HAD-like 11
HMA, heavy metal-associated domain Calcium ATPase, transduction domain A 11
DnaJ/Hsp40 cysteine-rich domain HSP40/DnaJ peptide-binding domain 11
Cryptochrome/photolyase, N-terminal domain Cryptochrome/photolyase FAD-binding domain 11
Carbamoyl phosphate synthetase, large subunit connection domain Methylglyoxal synthase-like 11
P-loop containing nucleoside triphosphate hydrolases HprK N-terminal domain-like 11
Elongation factor Ts (EF-Ts), dimerisation domain Elongation factor Ts (EF-Ts), dimerisation domain 11
Thioredoxin-like Six-hairpin glycosidases 11
Riboflavin synthase domain-like Riboflavin synthase domain-like 11
Thioesterase/thiol ester dehydrase-isomerase Thioesterase/thiol ester dehydrase-isomerase 11
Thiamin phosphate synthase Ribokinase-like 11
Cytochrome c oxidase subunit II-like, transmembrane region Cupredoxins 11
CalX-like Pectin lyase-like 11
Cysteine proteinases Pectin lyase-like 11
DNA repair protein MutS, domain I P-loop containing nucleoside triphosphate hydrolases 11
Coiled-coil domain of nucleotide exchange factor GrpE Head domain of nucleotide exchange factor GrpE 11
Translation proteins "Winged helix" DNA-binding domain 11
P-loop containing nucleoside triphosphate hydrolases C-terminal effector domain of the bipartite response regulators 11
2Fe-2S ferredoxin-like Molybdenum cofactor-binding domain 11
Adhesin YadA, collagen-binding domain Adhesin YadA, collagen-binding domain 11
Obg GTP-binding protein N-terminal domain P-loop containing nucleoside triphosphate hydrolases 11
PRTase-like PRTase-like 11
HMA, heavy metal-associated domain Calcium ATPase, transmembrane domain M 11
Nucleotidyltransferase substrate binding subunit/domain Poly A polymerase C-terminal region-like 11
NTF2-like Sec-C motif 11
Nitrite and sulphite reductase 4Fe-4S domain-like Nitrite and sulphite reductase 4Fe-4S domain-like 11
CbiG N-terminal domain-like CobE/GbiG C-terminal domain-like 11
Hsp33 domain HSP33 redox switch-like 11
Radical SAM enzymes TPR-like 11
TolB, N-terminal domain Tricorn protease N-terminal domain 11
GAF domain-like GAF domain-like 11
NusB-like S-adenosyl-L-methionine-dependent methyltransferases 11
Nucleotidylyl transferase tRNA-binding arm 11
FAD/NAD(P)-binding domain Nitrite/Sulfite reductase N-terminal domain-like 11
NAD(P)-binding Rossmann-fold domains Succinyl-CoA synthetase domains 11
Protein kinase-like (PK-like) P-loop containing nucleoside triphosphate hydrolases 11
CO dehydrogenase ISP C-domain like Molybdenum cofactor-binding domain 11
Tubulin nucleotide-binding domain-like Tubulin C-terminal domain-like 11
Lysozyme-like LysM domain 11
"Winged helix" DNA-binding domain PLP-dependent transferases 11
Cysteine proteinases Autotransporter 11
Nucleotide-binding domain FAD/NAD(P)-binding domain 11
HlyD-like secretion proteins HlyD-like secretion proteins 11
P-loop containing nucleoside triphosphate hydrolases Prokaryotic type KH domain (KH-domain type II) 11
Nucleotide-diphospho-sugar transferases Radical SAM enzymes 11
Histidine-containing phosphotransfer domain, HPT domain Histidine-containing phosphotransfer domain, HPT domain 11
Cytochrome c Cytochrome c 11
FabD/lysophospholipase-like Probable ACP-binding domain of malonyl-CoA ACP transacylase 11
FMN-binding split barrel 4Fe-4S ferredoxins 11
CRISPR-associated protein CRISPR-associated protein 11
Flavoproteins Flavoproteins 11
Nucleotide-diphospho-sugar transferases HAD-like 11
Thioredoxin-like 4Fe-4S ferredoxins 11
Barwin-like endoglucanases Sporulation related repeat 11
PLP-dependent transferases P-loop containing nucleoside triphosphate hydrolases 11
DNA repair protein MutS, domain I DNA repair protein MutS, domain II 11
HAMP domain-like Histidine-containing phosphotransfer domain, HPT domain 11
HydA/Nqo6-like HydB/Nqo4-like 11
Dihydropteroate synthetase-like Nitrite and sulphite reductase 4Fe-4S domain-like 11
Voltage-gated potassium channels TrkA C-terminal domain-like 11
YlxR-like L30e-like 11
TGS-like Class II aaRS and biotin synthetases 11
alpha-helical ferredoxin alpha-helical ferredoxin 11
P-loop containing nucleoside triphosphate hydrolases C-terminal UvrC-binding domain of UvrB 11
NAD(P)-binding Rossmann-fold domains Glutamyl tRNA-reductase dimerization domain 11
Aconitase B, N-terminal domain LeuD/IlvD-like 11
Pre-protein crosslinking domain of SecA Helical scaffold and wing domains of SecA 11
Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 1-deoxy-D-xylulose-5-phosphate reductoisomerase, C-terminal domain 11
Radical SAM enzymes S-adenosyl-L-methionine-dependent methyltransferases 11
FAD/NAD(P)-binding domain FAD-linked reductases, C-terminal domain 11
Penicillin binding protein dimerisation domain Penicillin-binding protein 2x (pbp-2x), c-terminal domain 11
Insert subdomain of RNA polymerase alpha subunit RBP11-like subunits of RNA polymerase 11
FAD/NAD(P)-binding domain Nitrite and sulphite reductase 4Fe-4S domain-like 11
Tex N-terminal region-like RuvA domain 2-like 11
Putative DNA-binding domain Class II aaRS and biotin synthetases 11
IlvD/EDD N-terminal domain-like LeuD/IlvD-like 11
Homo-oligomeric flavin-containing Cys decarboxylases, HFCD CoaB-like 11
Translation proteins ThrRS/AlaRS common domain 11
Adenine nucleotide alpha hydrolases-like Argininosuccinate synthetase, C-terminal domain 11
Actin-like ATPase domain Heat shock protein 70kD (HSP70), peptide-binding domain 11
FMN-linked oxidoreductases Nucleotide-binding domain 11
PurS-like PurM C-terminal domain-like 11
PurM C-terminal domain-like PurM C-terminal domain-like 11
Prokaryotic type I DNA topoisomerase Zinc beta-ribbon 11
MesJ substrate recognition domain-like PheT/TilS domain 11
Homocysteine S-methyltransferase Methionine synthase domain 11
DHH phosphoesterases Nucleotidyltransferase 11
FliG FliG 11
Nucleic acid-binding proteins ArfGap/RecO-like zinc finger 11
ClpP/crotonase NfeD domain-like 11
MFS general substrate transporter Acetyl-CoA synthetase-like 11
Adenine nucleotide alpha hydrolases-like GMP synthetase C-terminal dimerisation domain 11
UbiD C-terminal domain-like UbiD C-terminal domain-like 11
DNA methylase specificity domain DNA methylase specificity domain 11
HD-domain/PDEase-like ACT-like 11
Periplasmic binding protein-like II ACT-like 11
Rhodanese/Cell cycle control phosphatase SirA-like 11
Ribosomal protein S5 domain 2-like Type II DNA topoisomerase 11
Aminopeptidase/glucanase lid domain Zn-dependent exopeptidases 11
Eukaryotic type KH-domain (KH-domain type I) P-loop containing nucleoside triphosphate hydrolases 11
Metallo-dependent phosphatases P-loop containing nucleoside triphosphate hydrolases 11
CBS-domain pair Poly A polymerase C-terminal region-like 11
PIN domain-like DNA/RNA polymerases 11
GroEL equatorial domain-like GroEL-intermediate domain like 11
TrmE connector domain P-loop containing nucleoside triphosphate hydrolases 11
Tetrapyrrole methylase HemD-like 11
Periplasmic binding protein-like II Lysozyme-like 11
Aldolase post-HMGL domain-like 11
Rudiment single hybrid motif post-HMGL domain-like 11
Glutathione synthetase ATP-binding domain-like Methylglyoxal synthase-like 11
FAD/NAD-linked reductases, dimerisation (C-terminal) domain SirA-like 11
Nucleic acid-binding proteins Prokaryotic type KH domain (KH-domain type II) 11
6-phosphogluconate dehydrogenase C-terminal domain-like 6-phosphogluconate dehydrogenase C-terminal domain-like 11
Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain 11
Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) ThrRS/AlaRS common domain 11
Dihydropteroate synthetase-like Cobalamin (vitamin B12)-binding domain 11
P-loop containing nucleoside triphosphate hydrolases Initiation factor IF2/eIF5b, domain 3 11
Rho N-terminal domain-like P-loop containing nucleoside triphosphate hydrolases 11
Concanavalin A-like lectins/glucanases Concanavalin A-like lectins/glucanases 11
Tex N-terminal region-like Nucleic acid-binding proteins 11
Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain ACT-like 11
2Fe-2S ferredoxin-like CO dehydrogenase ISP C-domain like 11
DNA ligase/mRNA capping enzyme, catalytic domain RuvA domain 2-like 11
TGS-like ThrRS/AlaRS common domain 11
Rho N-terminal domain-like Nucleic acid-binding proteins 11
"Winged helix" DNA-binding domain Class II aaRS and biotin synthetases 11
Rubredoxin-like Rubredoxin-like 11
Cation efflux protein transmembrane domain-like Nitrogenase accessory factor-like 11
Trigger factor ribosome-binding domain FKBP-like 11
Rubredoxin-like FAD/NAD(P)-binding domain 11
TPR-like Carbohydrate-binding domain 11
Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 Eukaryotic type KH-domain (KH-domain type I) 11
MoeA N-terminal region -like MoeA C-terminal domain-like 11
Rubredoxin-like Superoxide reductase-like 11
DNA repair protein MutS, domain II DNA repair protein MutS, domain III 11
CalX-like CalX-like 11
PheT/TilS domain Putative DNA-binding domain 11
CheC-like Surface presentation of antigens (SPOA) 11
PheT/TilS domain Class II aaRS and biotin synthetases 11
Ferritin-like Calcium ATPase, transduction domain A 11
Homocysteine S-methyltransferase FAD-linked oxidoreductase 11
CarD-like TRCF domain-like 11
C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase Putative isomerase YbhE 11
Multiheme cytochromes Transmembrane di-heme cytochromes 11
DNA ligase/mRNA capping enzyme, catalytic domain BRCT domain 11
CheY-like Methylesterase CheB, C-terminal domain 11
FAD/NAD(P)-binding domain ISP domain 11
PIN domain-like P-loop containing nucleoside triphosphate hydrolases 11
Glutathione synthetase ATP-binding domain-like Aldolase 11
Putative DNA-binding domain Anticodon-binding domain of PheRS 11
MOP-like MOP-like 11
CBS-domain pair MgtE membrane domain-like 11
Nucleotidylyl transferase An anticodon-binding domain of class I aminoacyl-tRNA synthetases 11
YhbC-like, N-terminal domain YhbC-like, C-terminal domain 11
DNA clamp DNA clamp 11
Carbamoyl phosphate synthetase, small subunit N-terminal domain Class I glutamine amidotransferase-like 11
P-loop containing nucleoside triphosphate hydrolases CarD-like 11
"Winged helix" DNA-binding domain MOP-like 11
Enolase N-terminal domain-like Enolase C-terminal domain-like 11
Actin-like ATPase domain Heat shock protein 70kD (HSP70), C-terminal subdomain 11
Methylglyoxal synthase-like Cytidine deaminase-like 11
CBS-domain pair Nucleotidyltransferase 11
Ribosomal protein S5 domain 2-like Nucleic acid-binding proteins 11
YbaK/ProRS associated domain Class II aaRS ABD-related 11
Rhodanese/Cell cycle control phosphatase Ferritin-like 11
UBA-like Elongation factor Ts (EF-Ts), dimerisation domain 11
RNase III domain-like dsRNA-binding domain-like 11
CO dehydrogenase molybdoprotein N-domain-like Molybdenum cofactor-binding domain 11
Tex N-terminal region-like Ribonuclease H-like 11
SufE/NifU Fe-S cluster assembly (FSCA) domain-like 11
HD-domain/PDEase-like PilZ domain-like 11
Ribosomal protein S5 domain 2-like HSP90 C-terminal domain 11
Molybdenum cofactor biosynthesis proteins MoeA C-terminal domain-like 11
Nqo1C-terminal domain-like Nucleotide-binding domain 11
Glutathione synthetase ATP-binding domain-like Glutathione synthetase ATP-binding domain-like 11
N-terminal domain of MutM-like DNA repair proteins S13-like H2TH domain 11
S-adenosyl-L-methionine-dependent methyltransferases S-adenosyl-L-methionine-dependent methyltransferases 11
Phosphoenolpyruvate/pyruvate domain PK C-terminal domain-like 11
Glutathione synthetase ATP-binding domain-like Single hybrid motif 11
PEP carboxykinase N-terminal domain PEP carboxykinase-like 11
SP0561-like Periplasmic binding protein-like II 11
PreATP-grasp domain post-HMGL domain-like 11
Class II aaRS and biotin synthetases Translation proteins 11
Nucleotide cyclase TPR-like 11
Dihydropteroate synthetase-like Methionine synthase domain 11
GroEL equatorial domain-like GroEL apical domain-like 11
Nucleic acid-binding proteins PheT/TilS domain 11
Adenine nucleotide alpha hydrolases-like MesJ substrate recognition domain-like 11
Pentapeptide repeat-like Pentapeptide repeat-like 11
Trigger factor ribosome-binding domain Triger factor/SurA peptide-binding domain-like 11
Glucocorticoid receptor-like (DNA-binding domain) P-loop containing nucleoside triphosphate hydrolases 11
HydA/Nqo6-like Nqo5-like 11
2Fe-2S ferredoxin-like alpha-helical ferredoxin 11
Carbamate kinase-like PUA domain-like 11
ACT-like HAD-like 11
TPR-like C-terminal effector domain of the bipartite response regulators 11
ValRS/IleRS/LeuRS editing domain tRNA-binding arm 11
S-adenosyl-L-methionine-dependent methyltransferases NAD(P)-binding Rossmann-fold domains 11
Fe-only hydrogenase PYP-like sensor domain (PAS domain) 11
dsRNA-binding domain-like Ribosomal protein S5 domain 2-like 11
DNA ligase/mRNA capping enzyme, catalytic domain Nucleic acid-binding proteins 11
Flavoproteins 4Fe-4S ferredoxins 11
"Winged helix" DNA-binding domain GntR ligand-binding domain-like 11
Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases tRNA-binding arm 11
Eukaryotic type KH-domain (KH-domain type I) Nucleic acid-binding proteins 11
Type II DNA topoisomerase GyrA/ParC C-terminal domain-like 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) PRTase-like 11
Glutamyl tRNA-reductase catalytic, N-terminal domain NAD(P)-binding Rossmann-fold domains 11
Domain of the SRP/SRP receptor G-proteins P-loop containing nucleoside triphosphate hydrolases 11
PK beta-barrel domain-like Phosphoenolpyruvate/pyruvate domain 11
Tetrapyrrole methylase S-adenosyl-L-methionine-dependent methyltransferases 11
Nudix Nudix 11
P-loop containing nucleoside triphosphate hydrolases Smc hinge domain 11
Adenine nucleotide alpha hydrolases-like PheT/TilS domain 11
PreATP-grasp domain Methylglyoxal synthase-like 11
Aconitase B, N-terminal domain Aconitase iron-sulfur domain 11
TrpR-like Homeodomain-like 11
Ribonuclease PH domain 2-like Eukaryotic type KH-domain (KH-domain type I) 11
Molybdenum cofactor biosynthesis proteins CinA-like 11
5' to 3' exonuclease, C-terminal subdomain DNA/RNA polymerases 11
"Winged helix" DNA-binding domain LexA/Signal peptidase 11
Glutamine synthetase, N-terminal domain Glutamine synthetase/guanido kinase 11
Trimeric LpxA-like enzymes Phosphoglucomutase, C-terminal domain 11
Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain Nucleotidylyl transferase 11
Macro domain-like Zn-dependent exopeptidases 11
Nucleotide cyclase P-loop containing nucleoside triphosphate hydrolases 11
DHH phosphoesterases Poly A polymerase C-terminal region-like 11
Methionine synthase domain Cobalamin (vitamin B12)-binding domain 11
Glycerol-3-phosphate (1)-acyltransferase Acetyl-CoA synthetase-like 11
DNA repair protein MutS, domain I DNA repair protein MutS, domain III 11
4Fe-4S ferredoxins FMN-linked oxidoreductases 11
Class II aaRS and biotin synthetases Anticodon-binding domain of PheRS 11
lambda integrase-like, N-terminal domain DNA breaking-rejoining enzymes 11
GAF domain-like Phosphoenolpyruvate/pyruvate domain 11
Voltage-gated potassium channels NAD(P)-binding Rossmann-fold domains 11
L30e-like alpha/beta knot 11
Translation proteins PRC-barrel domain 11
Ribosomal protein S5 domain 2-like Eukaryotic type KH-domain (KH-domain type I) 11
Ribonuclease H-like Nucleic acid-binding proteins 11
Rudiment single hybrid motif Aldolase 11
Ribosomal protein L7/12, oligomerisation (N-terminal) domain ClpS-like 11
HIT-like HIT-like 11
Ribokinase-like Nucleotidylyl transferase 11
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase Type II DNA topoisomerase 11
Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 Nucleic acid-binding proteins 11
Class II aaRS and biotin synthetases YbaK/ProRS associated domain 11
Nucleotidyltransferase P-loop containing nucleoside triphosphate hydrolases 11
HAMP domain-like GAF domain-like 11
RuvA domain 2-like RuvA domain 2-like 11
YjeF N-terminal domain-like Ribokinase-like 11
Carbon-nitrogen hydrolase Adenine nucleotide alpha hydrolases-like 11
Transcription factor NusA, N-terminal domain Nucleic acid-binding proteins 11
Nitrite and sulphite reductase 4Fe-4S domain-like ISP domain 11
Glycerol-3-phosphate (1)-acyltransferase Acyl-CoA N-acyltransferases (Nat) 11
E set domains E set domains 11
Alpha subunit of glutamate synthase, C-terminal domain alpha-helical ferredoxin 11
Fe-only hydrogenase P-loop containing nucleoside triphosphate hydrolases 11
PreATP-grasp domain Carbamoyl phosphate synthetase, large subunit connection domain 11
MoeA N-terminal region -like Molybdenum cofactor biosynthesis proteins 11
Single hybrid motif Single hybrid motif 11
Nucleotide-diphospho-sugar transferases HD-domain/PDEase-like 11
MgtE N-terminal domain-like MgtE membrane domain-like 11
Nucleic acid-binding proteins GAD domain-like 11
Ferritin-like Calcium ATPase, transmembrane domain M 11
Nucleotidyltransferase Nucleotidyltransferase 11
S-adenosylmethionine synthetase S-adenosylmethionine synthetase 11
Class I glutamine amidotransferase-like GMP synthetase C-terminal dimerisation domain 11
Acid phosphatase/Vanadium-dependent haloperoxidase (Phosphotyrosine protein) phosphatases II 11
Rhodanese/Cell cycle control phosphatase DsrEFH-like 11
Trimeric LpxA-like enzymes Phosphoglucomutase, first 3 domains 11
PYP-like sensor domain (PAS domain) C-terminal effector domain of the bipartite response regulators 11
P-loop containing nucleoside triphosphate hydrolases TrpR-like 11
Nucleic acid-binding proteins Anticodon-binding domain of PheRS 11
Rudiment single hybrid motif Single hybrid motif 11
Nucleic acid-binding proteins BRCT domain 11
Anthrax protective antigen Quinoprotein alcohol dehydrogenase-like 11
P-loop containing nucleoside triphosphate hydrolases RecA protein, C-terminal domain 11
Ribosomal protein S5 domain 2-like Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 11
FAD/NAD-linked reductases, dimerisation (C-terminal) domain DsrEFH-like 11
Acyl-CoA N-acyltransferases (Nat) ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 11
2Fe-2S ferredoxin-like CO dehydrogenase molybdoprotein N-domain-like 11
beta-lactamase/transpeptidase-like Penicillin-binding protein 2x (pbp-2x), c-terminal domain 11
Nucleotidylyl transferase Ribosomal protein L25-like 11
Ribosomal protein S5 domain 2-like GHMP Kinase, C-terminal domain 11
alpha/beta-Hydrolases S-adenosyl-L-methionine-dependent methyltransferases 11
PheT/TilS domain Anticodon-binding domain of PheRS 11
FAD/NAD(P)-binding domain SirA-like 11
DNA-glycosylase Nudix 11
P-loop containing nucleoside triphosphate hydrolases Restriction endonuclease-like 11
Cation efflux protein cytoplasmic domain-like Nitrogenase accessory factor-like 11
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase DNA mismatch repair protein MutL 11
TPR-like Periplasmic binding protein-like I 11
Prokaryotic type KH domain (KH-domain type II) Prokaryotic type KH domain (KH-domain type II) 11
Nucleotidylyl transferase Alpha-L RNA-binding motif 11
PK beta-barrel domain-like PK C-terminal domain-like 11
GIY-YIG endonuclease RuvA domain 2-like 11
Cytochrome c oxidase subunit II-like, transmembrane region Cytochrome c 11
RBP11-like subunits of RNA polymerase C-terminal domain of RNA polymerase alpha subunit 11
Nitrite/Sulfite reductase N-terminal domain-like Nitrite/Sulfite reductase N-terminal domain-like 11
UROD/MetE-like UROD/MetE-like 11
RuvA domain 2-like DNA helicase RuvA subunit, C-terminal domain 11
Ribonuclease H-like HRDC-like 11
MFS general substrate transporter Glycerol-3-phosphate (1)-acyltransferase 11
YrdC/RibB RibA-like 11
PurS-like PurM N-terminal domain-like 11
Ribonuclease PH domain 2-like Ribonuclease PH domain 2-like 11
"Winged helix" DNA-binding domain C-terminal domain of transcriptional repressors 11
Glutamine synthetase/guanido kinase GatB/YqeY motif 11
LysM domain LysM domain 11
PurM N-terminal domain-like PurM N-terminal domain-like 11
P-loop containing nucleoside triphosphate hydrolases TGS-like 11
Aspartate/glutamate racemase Aspartate/glutamate racemase 11
PreATP-grasp domain Aldolase 11
HisI-like all-alpha NTP pyrophosphatases 11
Chorismate mutase II ACT-like 11
Ribosomal protein S5 domain 2-like DNA mismatch repair protein MutL 11

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