SUPERFAMILY 1.75 HMM library and genome assignments server

Domain combination pairs in Polaromonas sp. JS666

All pairs of domain combinations at the superfamily level are listed here.
The identification of domain pairs does not account for the possibility of non-contiguous domains. Inserted, or interlaced, domains are seen as having a simple pair ordering.

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Adjacent domain pairs graph

Graph of adjacent domain pairs.


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Domain combination pairs

711 domain combination pairs.
Click on a column heading to sort that column, or the 'View' button to see domain architetures for that domain pair combination.

Superfamily (N) Superfamily (C) Number of occurrances Number unique
"Winged helix" DNA-binding domain Periplasmic binding protein-like II 1051
Homodimeric domain of signal transducing histidine kinase ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 4225
"Winged helix" DNA-binding domain GntR ligand-binding domain-like 353
P-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases 3117
PYP-like sensor domain (PAS domain) ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 2723
NAD(P)-binding Rossmann-fold domains 6-phosphogluconate dehydrogenase C-terminal domain-like 255
Thioredoxin-like GST C-terminal domain-like 242
Acyl-CoA dehydrogenase NM domain-like Acyl-CoA dehydrogenase C-terminal domain-like 245
P-loop containing nucleoside triphosphate hydrolases MOP-like 232
Homeodomain-like Tetracyclin repressor-like, C-terminal domain 223
PYP-like sensor domain (PAS domain) Homodimeric domain of signal transducing histidine kinase 2218
Multidrug resistance efflux transporter EmrE Multidrug resistance efflux transporter EmrE 214
FAD/NAD(P)-binding domain FAD-linked reductases, C-terminal domain 206
CheY-like C-terminal effector domain of the bipartite response regulators 204
Formate/glycerate dehydrogenase catalytic domain-like NAD(P)-binding Rossmann-fold domains 172
Enolase N-terminal domain-like Enolase C-terminal domain-like 171
GroES-like NAD(P)-binding Rossmann-fold domains 173
CheY-like ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 1614
"Winged helix" DNA-binding domain GAF domain-like 151
Zn-dependent exopeptidases Bacterial exopeptidase dimerisation domain 152
NAD(P)-binding Rossmann-fold domains Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 154
PYP-like sensor domain (PAS domain) PYP-like sensor domain (PAS domain) 1414
Actin-like ATPase domain Actin-like ATPase domain 145
CheY-like Homodimeric domain of signal transducing histidine kinase 1311
cAMP-binding domain-like "Winged helix" DNA-binding domain 132
Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) 136
Thiolase-like Thiolase-like 121
"Winged helix" DNA-binding domain Dimeric alpha+beta barrel 121
Composite domain of metallo-dependent hydrolases Metallo-dependent hydrolases 126
Multidrug efflux transporter AcrB transmembrane domain Multidrug efflux transporter AcrB transmembrane domain 126
PreATP-grasp domain Glutathione synthetase ATP-binding domain-like 114
Cytochrome c Cytochrome c 115
Sigma2 domain of RNA polymerase sigma factors Sigma3 and sigma4 domains of RNA polymerase sigma factors 114
Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains Multidrug efflux transporter AcrB transmembrane domain 105
Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains 105
Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains Multidrug efflux transporter AcrB transmembrane domain 105
Riboflavin synthase domain-like Ferredoxin reductase-like, C-terminal NADP-linked domain 105
Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains 105
Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains 105
P-loop containing nucleoside triphosphate hydrolases Homeodomain-like 107
lambda repressor-like DNA-binding domains Periplasmic binding protein-like I 101
ABC transporter transmembrane region P-loop containing nucleoside triphosphate hydrolases 92
P-loop containing nucleoside triphosphate hydrolases Translation proteins 95
Aminoacid dehydrogenase-like, N-terminal domain NAD(P)-binding Rossmann-fold domains 93
FAD-binding/transporter-associated domain-like FAD-linked oxidases, C-terminal domain 94
ISP domain Bet v1-like 82
FAD/NAD(P)-binding domain FAD/NAD-linked reductases, dimerisation (C-terminal) domain 85
Thiamin diphosphate-binding fold (THDP-binding) TK C-terminal domain-like 83
Glutathione synthetase ATP-binding domain-like Rudiment single hybrid motif 82
PreATP-grasp domain Rudiment single hybrid motif 82
CheY-like PYP-like sensor domain (PAS domain) 87
Ribosomal protein S5 domain 2-like P-loop containing nucleoside triphosphate hydrolases 75
GAF domain-like ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 77
MurD-like peptide ligases, catalytic domain MurD-like peptide ligases, peptide-binding domain 75
PYP-like sensor domain (PAS domain) GAF domain-like 77
HAMP domain-like ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 76
Alpha-L RNA-binding motif Pseudouridine synthase 62
Nucleotidylyl transferase Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 65
IlvD/EDD N-terminal domain-like LeuD/IlvD-like 61
Riboflavin synthase domain-like 2Fe-2S ferredoxin-like 62
Homeodomain-like Homeodomain-like 65
FAD/NAD(P)-binding domain FAD/NAD(P)-binding domain 63
Ferredoxin reductase-like, C-terminal NADP-linked domain 2Fe-2S ferredoxin-like 62
ACT-like ACT-like 65
Formate dehydrogenase/DMSO reductase, domains 1-3 ADC-like 54
Translation proteins EF-G C-terminal domain-like 53
"Winged helix" DNA-binding domain PLP-dependent transferases 51
Thiamin diphosphate-binding fold (THDP-binding) DHS-like NAD/FAD-binding domain 51
Homeodomain-like SIS domain 51
lambda repressor-like DNA-binding domains RmlC-like cupins 51
CO dehydrogenase molybdoprotein N-domain-like Molybdenum cofactor-binding domain 53
GAF domain-like Homeodomain-like 53
HAMP domain-like Homodimeric domain of signal transducing histidine kinase 54
Homeodomain-like Ribonuclease H-like 53
6-phosphogluconate dehydrogenase C-terminal domain-like 6-phosphogluconate dehydrogenase C-terminal domain-like 53
2Fe-2S ferredoxin-like CO dehydrogenase ISP C-domain like 52
GAF domain-like Homodimeric domain of signal transducing histidine kinase 55
P-loop containing nucleoside triphosphate hydrolases EF-G C-terminal domain-like 53
ClpP/crotonase ClpP/crotonase 51
Histidine-containing phosphotransfer domain, HPT domain CheY-like 44
Lysozyme-like beta-lactamase/transpeptidase-like 43
Triger factor/SurA peptide-binding domain-like FKBP-like 44
Glutamine synthetase, N-terminal domain Glutamine synthetase/guanido kinase 41
Calcium ATPase, transduction domain A Calcium ATPase, transmembrane domain M 44
HAD-like Calcium ATPase, transmembrane domain M 44
MetI-like MetI-like 42
"Winged helix" DNA-binding domain Chorismate lyase-like 41
Glutathione synthetase ATP-binding domain-like Single hybrid motif 41
Rhodanese/Cell cycle control phosphatase Rhodanese/Cell cycle control phosphatase 42
Histidine-containing phosphotransfer domain, HPT domain ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 44
Aspartate/glutamate racemase Aspartate/glutamate racemase 41
PurM N-terminal domain-like PurM C-terminal domain-like 42
Calcium ATPase, transduction domain A HAD-like 44
CheY-like P-loop containing nucleoside triphosphate hydrolases 43
EF-G C-terminal domain-like EF-G C-terminal domain-like 42
Phospholipase D/nuclease Phospholipase D/nuclease 43
Single hybrid motif CoA-dependent acyltransferases 42
Single hybrid motif Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex 42
ParB/Sulfiredoxin KorB DNA-binding domain-like 41
Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex CoA-dependent acyltransferases 42
CheY-like Homeodomain-like 43
HAMP domain-like PYP-like sensor domain (PAS domain) 44
Trypsin-like serine proteases PDZ domain-like 43
Rudiment single hybrid motif Single hybrid motif 41
PreATP-grasp domain Single hybrid motif 41
HAMP domain-like GAF domain-like 44
EspE N-terminal domain-like P-loop containing nucleoside triphosphate hydrolases 42
P-loop containing nucleoside triphosphate hydrolases "Winged helix" DNA-binding domain 44
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase Ribosomal protein S5 domain 2-like 44
Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain 32
Nucleic acid-binding proteins P-loop containing nucleoside triphosphate hydrolases 33
ClpP/crotonase 6-phosphogluconate dehydrogenase C-terminal domain-like 32
Thioesterase/thiol ester dehydrase-isomerase Thioesterase/thiol ester dehydrase-isomerase 31
Nucleotide cyclase EAL domain-like 33
MurCD N-terminal domain MurD-like peptide ligases, catalytic domain 32
GAF domain-like P-loop containing nucleoside triphosphate hydrolases 32
HD-domain/PDEase-like Nucleotidyltransferase 33
Class II aaRS and biotin synthetases Class II aaRS ABD-related 33
P-loop containing nucleoside triphosphate hydrolases EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 31
Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like 32
FAD/NAD(P)-binding domain Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain 33
ValRS/IleRS/LeuRS editing domain Nucleotidylyl transferase 32
lambda integrase-like, N-terminal domain DNA breaking-rejoining enzymes 33
CheY-like CheY-like 33
ValRS/IleRS/LeuRS editing domain Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 32
MurCD N-terminal domain MurD-like peptide ligases, peptide-binding domain 32
Nucleic acid-binding proteins RuvA domain 2-like 33
P-loop containing nucleoside triphosphate hydrolases post-AAA+ oligomerization domain-like 32
CorA soluble domain-like Magnesium transport protein CorA, transmembrane region 31
Translation proteins EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 31
ClpP/crotonase NAD(P)-binding Rossmann-fold domains 32
PLP-binding barrel Alanine racemase C-terminal domain-like 32
Nucleic acid-binding proteins Class II aaRS and biotin synthetases 33
Aconitase iron-sulfur domain LeuD/IlvD-like 33
P-loop containing nucleoside triphosphate hydrolases Class I glutamine amidotransferase-like 31
DNA ligase/mRNA capping enzyme, catalytic domain Nucleic acid-binding proteins 33
Phosphohistidine domain Phosphoenolpyruvate/pyruvate domain 32
Nucleic acid-binding proteins Nucleic acid-binding proteins 33
Molybdenum cofactor-binding domain Molybdenum cofactor-binding domain 33
FAD-binding/transporter-associated domain-like CO dehydrogenase flavoprotein C-terminal domain-like 22
Oxidoreductase molybdopterin-binding domain E set domains 21
Periplasmic binding protein-like II Periplasmic binding protein-like II 21
Histidine-containing phosphotransfer domain, HPT domain CheW-like 22
Double Clp-N motif P-loop containing nucleoside triphosphate hydrolases 22
RuBisCO, large subunit, small (N-terminal) domain RuBisCo, C-terminal domain 21
Methylated DNA-protein cysteine methyltransferase domain Methylated DNA-protein cysteine methyltransferase, C-terminal domain 22
Chaperone J-domain HSP40/DnaJ peptide-binding domain 22
PYP-like sensor domain (PAS domain) Homeodomain-like 21
Formyltransferase ACT-like 22
GAF domain-like Nucleotide cyclase 22
Nqo1 FMN-binding domain-like Nqo1C-terminal domain-like 22
Protein kinase-like (PK-like) P-loop containing nucleoside triphosphate hydrolases 22
Class I glutamine amidotransferase-like Homeodomain-like 21
EF-G C-terminal domain-like Ribosomal protein S5 domain 2-like 21
FAD/NAD(P)-binding domain Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain 22
Sensory domain-like ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 22
Nucleotidyltransferase Nucleotidyltransferase substrate binding subunit/domain 22
PUA domain-like Ribosomal protein S5 domain 2-like 21
Molybdenum cofactor biosynthesis proteins MoeA C-terminal domain-like 21
HSP40/DnaJ peptide-binding domain HSP40/DnaJ peptide-binding domain 22
Nucleotidyltransferase Poly A polymerase C-terminal region-like 21
Ribosomal protein S5 domain 2-like Type II DNA topoisomerase 22
Actin-like ATPase domain Heat shock protein 70kD (HSP70), C-terminal subdomain 22
Nucleic acid-binding proteins Translation proteins SH3-like domain 22
SMAD/FHA domain SMAD/FHA domain 21
PDZ domain-like PDZ domain-like 21
TPR-like P-loop containing nucleoside triphosphate hydrolases 22
PYP-like sensor domain (PAS domain) P-loop containing nucleoside triphosphate hydrolases 21
Type II DNA topoisomerase GyrA/ParC C-terminal domain-like 21
Glutathione synthetase ATP-binding domain-like MurD-like peptide ligases, catalytic domain 22
HD-domain/PDEase-like ACT-like 22
Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain ACT-like 21
Aldolase 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain 22
Nucleotide-diphospho-sugar transferases RmlC-like cupins 21
Phosphoglucomutase, first 3 domains Phosphoglucomutase, C-terminal domain 21
CalX-like beta-Roll 21
Aldolase post-HMGL domain-like 22
Phosphoglucomutase, first 3 domains Phosphoglucomutase, first 3 domains 21
GAF domain-like EAL domain-like 22
TPR-like TPR-like 22
TPR-like C-terminal effector domain of the bipartite response regulators 22
PYP-like sensor domain (PAS domain) Nucleotide cyclase 22
HMA, heavy metal-associated domain Calcium ATPase, transmembrane domain M 22
HMA, heavy metal-associated domain Calcium ATPase, transduction domain A 22
Sensory domain-like Homodimeric domain of signal transducing histidine kinase 22
FAD-linked oxidases, C-terminal domain alpha-helical ferredoxin 22
Sigma2 domain of RNA polymerase sigma factors NTF2-like 21
MoeA N-terminal region -like Molybdenum cofactor biosynthesis proteins 21
Penicillin binding protein dimerisation domain beta-lactamase/transpeptidase-like 22
HD-domain/PDEase-like TGS-like 22
Nucleotidyltransferase ACT-like 22
GreA transcript cleavage protein, N-terminal domain FKBP-like 21
4Fe-4S ferredoxins Formate dehydrogenase/DMSO reductase, domains 1-3 22
lambda repressor-like DNA-binding domains LexA/Signal peptidase 22
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase CheW-like 22
Cupredoxins Cytochrome c 22
Zinc beta-ribbon Prokaryotic SH3-related domain 21
Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 21
MurE/MurF N-terminal domain MurD-like peptide ligases, peptide-binding domain 21
Translation proteins Ribosomal protein S5 domain 2-like 21
Nucleotidyltransferase TGS-like 22
Glutathione synthetase ATP-binding domain-like Succinyl-CoA synthetase domains 22
Sigma3 and sigma4 domains of RNA polymerase sigma factors NTF2-like 21
Putative DNA-binding domain P-loop containing nucleoside triphosphate hydrolases 22
NAD(P)-binding Rossmann-fold domains Isocitrate/Isopropylmalate dehydrogenase-like 21
Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain 22
Fe,Mn superoxide dismutase (SOD), N-terminal domain Fe,Mn superoxide dismutase (SOD), C-terminal domain 22
MoeA N-terminal region -like MoeA C-terminal domain-like 21
PYP-like sensor domain (PAS domain) EAL domain-like 22
Composite domain of metallo-dependent hydrolases Composite domain of metallo-dependent hydrolases 22
Nucleotide-binding domain FAD/NAD(P)-binding domain 22
Aminoacid dehydrogenase-like, N-terminal domain Isocitrate/Isopropylmalate dehydrogenase-like 21
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase Type II DNA topoisomerase 22
2Fe-2S ferredoxin-like 4Fe-4S ferredoxins 22
Nqo1 FMN-binding domain-like Nqo1 middle domain-like 22
FAD/NAD(P)-binding domain HI0933 insert domain-like 21
CBS-domain pair FAD-binding/transporter-associated domain-like 21
Nqo1 middle domain-like Nqo1C-terminal domain-like 22
Actin-like ATPase domain Heat shock protein 70kD (HSP70), peptide-binding domain 22
FAD-binding/transporter-associated domain-like alpha-helical ferredoxin 22
PYP-like sensor domain (PAS domain) Histidine-containing phosphotransfer domain, HPT domain 22
DsbC/DsbG N-terminal domain-like Thioredoxin-like 21
2Fe-2S ferredoxin-like Formate dehydrogenase/DMSO reductase, domains 1-3 22
Tryptophan synthase beta subunit-like PLP-dependent enzymes ACT-like 22
HMA, heavy metal-associated domain HAD-like 22
L30e-like alpha/beta knot 21
FMN-linked oxidoreductases FAD/NAD(P)-binding domain 22
Cupredoxins Cupredoxins 22
P-loop containing nucleoside triphosphate hydrolases C-terminal domain of alpha and beta subunits of F1 ATP synthase 21
Nicotinate/Quinolinate PRTase N-terminal domain-like Nicotinate/Quinolinate PRTase C-terminal domain-like 21
MurE/MurF N-terminal domain MurD-like peptide ligases, catalytic domain 21
CheW-like CheY-like 22
Outer membrane efflux proteins (OEP) OmpA-like 22
Class II aaRS and biotin synthetases ThrRS/AlaRS common domain 22
Heat shock protein 70kD (HSP70), peptide-binding domain Heat shock protein 70kD (HSP70), C-terminal subdomain 22
NAD(P)-binding Rossmann-fold domains NAD(P)-binding Rossmann-fold domains 22
FAD-linked reductases, C-terminal domain 4Fe-4S ferredoxins 22
FAD/NAD(P)-binding domain 4Fe-4S ferredoxins 22
Periplasmic binding protein-like II ACT-like 22
NAD(P)-binding Rossmann-fold domains TrkA C-terminal domain-like 22
Nitrite/Sulfite reductase N-terminal domain-like Nitrite and sulphite reductase 4Fe-4S domain-like 22
LuxS/MPP-like metallohydrolase LuxS/MPP-like metallohydrolase 21
Hedgehog/intein (Hint) domain Homing endonucleases 22
tRNA-binding arm Class II aaRS and biotin synthetases 21
Cobalamin (vitamin B12)-dependent enzymes Cobalamin (vitamin B12)-binding domain 22
"Winged helix" DNA-binding domain "Winged helix" DNA-binding domain 21
Creatinase/prolidase N-terminal domain Creatinase/aminopeptidase 21
NAD(P)-binding Rossmann-fold domains Succinyl-CoA synthetase domains 22
P-loop containing nucleoside triphosphate hydrolases FtsH protease domain-like 22
Glutathione synthetase ATP-binding domain-like Phosphoenolpyruvate/pyruvate domain 21
N-terminal domain of alpha and beta subunits of F1 ATP synthase C-terminal domain of alpha and beta subunits of F1 ATP synthase 21
PUA domain-like P-loop containing nucleoside triphosphate hydrolases 21
NAD(P)-binding Rossmann-fold domains ACT-like 21
N-terminal domain of alpha and beta subunits of F1 ATP synthase P-loop containing nucleoside triphosphate hydrolases 21
Glutathione synthetase ATP-binding domain-like Phosphohistidine domain 21
DnaK suppressor protein DksA, alpha-hairpin domain Glucocorticoid receptor-like (DNA-binding domain) 22
Diaminopimelate epimerase-like Diaminopimelate epimerase-like 22
Ribosomal protein S5 domain 2-like Ribonuclease PH domain 2-like 22
Nucleotidyltransferase substrate binding subunit/domain HD-domain/PDEase-like 11
Hedgehog/intein (Hint) domain PFL-like glycyl radical enzymes 11
RuvA domain 2-like MCP/YpsA-like 11
PP2C-like SpoIIaa-like 11
Fe-S cluster assembly (FSCA) domain-like P-loop containing nucleoside triphosphate hydrolases 11
N-terminal domain of bifunctional PutA protein FAD-linked oxidoreductase 11
Urease metallochaperone UreE, N-terminal domain Urease metallochaperone UreE, C-terminal domain 11
DNA repair protein MutS, domain I DNA repair protein MutS, domain III 11
Pili subunits Pili subunits 11
CheY-like Nucleotide cyclase 11
N-terminal domain of MutM-like DNA repair proteins S13-like H2TH domain 11
HMA, heavy metal-associated domain HMA, heavy metal-associated domain 11
Elongation factor Ts (EF-Ts), dimerisation domain Elongation factor Ts (EF-Ts), dimerisation domain 11
Histidine-containing phosphotransfer domain, HPT domain Histidine-containing phosphotransfer domain, HPT domain 11
Nucleic acid-binding proteins BRCT domain 11
Restriction endonuclease-like FKBP-like 11
N-terminal domain of DnaB helicase Hedgehog/intein (Hint) domain 11
Thioredoxin-like Thioredoxin-like 11
EPT/RTPC-like RNA 3'-terminal phosphate cyclase, RPTC, insert domain 11
lambda repressor-like DNA-binding domains Cyanase C-terminal domain 11
ThrRS/AlaRS common domain Class II aaRS ABD-related 11
FMN-linked oxidoreductases Alpha subunit of glutamate synthase, C-terminal domain 11
PEP carboxykinase N-terminal domain PEP carboxykinase-like 11
Methylglyoxal synthase-like Cytidine deaminase-like 11
PurM C-terminal domain-like PurM C-terminal domain-like 11
TATA-box binding protein-like DNA-glycosylase 11
HprK N-terminal domain-like PEP carboxykinase-like 11
Nucleotide cyclase SMAD/FHA domain 11
YgfB-like Sec-C motif 11
"Winged helix" DNA-binding domain Rhodanese/Cell cycle control phosphatase 11
Acetyl-CoA synthetase-like Glycerol-3-phosphate (1)-acyltransferase 11
Glucocorticoid receptor-like (DNA-binding domain) P-loop containing nucleoside triphosphate hydrolases 11
Nucleic acid-binding proteins PheT/TilS domain 11
2Fe-2S ferredoxin-like alpha-helical ferredoxin 11
Ferritin-like HAD-like 11
P-loop containing nucleoside triphosphate hydrolases Restriction endonuclease-like 11
Ribonuclease H-like RuvA domain 2-like 11
Glutamyl tRNA-reductase catalytic, N-terminal domain Glutamyl tRNA-reductase dimerization domain 11
Restriction endonuclease-like RuvA domain 2-like 11
Nucleotidyltransferase substrate binding subunit/domain Nucleotidyltransferase substrate binding subunit/domain 11
DNA repair protein MutS, domain II DNA repair protein MutS, domain III 11
UraD-Like Bacterial exopeptidase dimerisation domain 11
Chaperone J-domain DnaJ/Hsp40 cysteine-rich domain 11
Restriction endonuclease-like Zinc beta-ribbon 11
Sec-C motif TPR-like 11
Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) ThrRS/AlaRS common domain 11
Epsilon subunit of F1F0-ATP synthase N-terminal domain Epsilon subunit of F1F0-ATP synthase C-terminal domain 11
P-loop containing nucleoside triphosphate hydrolases C-terminal effector domain of the bipartite response regulators 11
Aconitase B, N-terminal domain LeuD/IlvD-like 11
Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain Pyrimidine nucleoside phosphorylase C-terminal domain 11
TrmE connector domain P-loop containing nucleoside triphosphate hydrolases 11
DAK1/DegV-like DhaL-like 11
RuvA domain 2-like RuvA domain 2-like 11
Ribosomal protein S5 domain 2-like Nucleic acid-binding proteins 11
NagB/RpiA/CoA transferase-like D-ribose-5-phosphate isomerase (RpiA), lid domain 11
Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 11
Tubulin nucleotide-binding domain-like Tubulin C-terminal domain-like 11
Cytochrome c oxidase subunit II-like, transmembrane region Cupredoxins 11
"Winged helix" DNA-binding domain Acyl-CoA N-acyltransferases (Nat) 11
GAF domain-like CheY-like 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) FMN-linked oxidoreductases 11
Carbamate kinase-like PUA domain-like 11
Cytidine deaminase-like Dihydrofolate reductase-like 11
CO dehydrogenase molybdoprotein N-domain-like Cytochrome c 11
P-loop containing nucleoside triphosphate hydrolases TGS-like 11
Nucleic acid-binding proteins Putative DNA-binding domain 11
Nucleotide-binding domain Nucleotide-binding domain 11
HlyD-like secretion proteins Outer membrane efflux proteins (OEP) 11
Coiled-coil domain of nucleotide exchange factor GrpE Head domain of nucleotide exchange factor GrpE 11
P-loop containing nucleoside triphosphate hydrolases Cobalamin (vitamin B12)-dependent enzymes 11
PRTase-like PRTase-like 11
CO dehydrogenase ISP C-domain like FAD-binding/transporter-associated domain-like 11
PYP-like sensor domain (PAS domain) Ribonuclease H-like 11
PIN domain-like DNA/RNA polymerases 11
NAD(P)-binding Rossmann-fold domains UDP-glucose/GDP-mannose dehydrogenase C-terminal domain 11
EPT/RTPC-like P-loop containing nucleoside triphosphate hydrolases 11
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 11
PheT/TilS domain Putative DNA-binding domain 11
N-terminal domain of DnaB helicase P-loop containing nucleoside triphosphate hydrolases 11
Glutamine synthetase/guanido kinase GatB/YqeY motif 11
Thioredoxin-like Nqo1 FMN-binding domain-like 11
Class II aaRS and biotin synthetases GAD domain-like 11
N-terminal domain of MutM-like DNA repair proteins Glucocorticoid receptor-like (DNA-binding domain) 11
GroES-like GroES-like 11
CheY-like PP2C-like 11
Ribonuclease H-like DNA/RNA polymerases 11
Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 1-deoxy-D-xylulose-5-phosphate reductoisomerase, C-terminal domain 11
GroEL equatorial domain-like GroEL apical domain-like 11
P-loop containing nucleoside triphosphate hydrolases C-terminal UvrC-binding domain of UvrB 11
GAF domain-like GAF domain-like 11
Nucleotidylyl transferase Alpha-L RNA-binding motif 11
Class II aaRS and biotin synthetases Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) 11
P-loop containing nucleoside triphosphate hydrolases Hedgehog/intein (Hint) domain 11
Nitrite/Sulfite reductase N-terminal domain-like Nitrite/Sulfite reductase N-terminal domain-like 11
Homodimeric domain of signal transducing histidine kinase Histidine-containing phosphotransfer domain, HPT domain 11
C-terminal UvrC-binding domain of UvrB RuvA domain 2-like 11
HCP-like TPR-like 11
Ferritin-like Calcium ATPase, transmembrane domain M 11
RuvA domain 2-like JAB1/MPN domain 11
Aconitase B, N-terminal domain Aconitase iron-sulfur domain 11
Homo-oligomeric flavin-containing Cys decarboxylases, HFCD CoaB-like 11
Metal cation-transporting ATPase, ATP-binding domain N HAD-like 11
Metal cation-transporting ATPase, ATP-binding domain N Calcium ATPase, transmembrane domain M 11
Leukotriene A4 hydrolase N-terminal domain Metalloproteases ("zincins"), catalytic domain 11
dsRNA-binding domain-like Ribosomal protein S5 domain 2-like 11
Tetrapyrrole methylase S-adenosyl-L-methionine-dependent methyltransferases 11
Actin-like ATPase domain HD-domain/PDEase-like 11
SGNH hydrolase Autotransporter 11
Hsp33 domain HSP33 redox switch-like 11
Nucleotide-diphospho-sugar transferases Trimeric LpxA-like enzymes 11
RuvA domain 2-like BRCT domain 11
Carbamoyl phosphate synthetase, small subunit N-terminal domain Class I glutamine amidotransferase-like 11
Ribosomal protein L6 Ribosomal protein L6 11
TolB, N-terminal domain Tricorn protease N-terminal domain 11
Glutathione synthetase ATP-binding domain-like Glutathione synthetase ATP-binding domain-like 11
Nucleotidylyl transferase Riboflavin kinase-like 11
Adenine nucleotide alpha hydrolases-like MesJ substrate recognition domain-like 11
Rhodanese/Cell cycle control phosphatase Multiheme cytochromes 11
YbaK/ProRS associated domain Class II aaRS ABD-related 11
Aldolase CoA-transferase family III (CaiB/BaiF) 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) PRTase-like 11
ARM repeat TPR-like 11
Glutathione synthetase ATP-binding domain-like MurD-like peptide ligases, peptide-binding domain 11
Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain Pyrimidine nucleoside phosphorylase C-terminal domain 11
Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases Nucleic acid-binding proteins 11
P-loop containing nucleoside triphosphate hydrolases Initiation factor IF2/eIF5b, domain 3 11
Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain Phosphohistidine domain 11
YhbC-like, N-terminal domain YhbC-like, C-terminal domain 11
TGS-like Class II aaRS ABD-related 11
PUA domain-like S-adenosyl-L-methionine-dependent methyltransferases 11
Ribonuclease H-like Nucleic acid-binding proteins 11
YajQ-like YajQ-like 11
Prokaryotic type KH domain (KH-domain type II) Rad51 N-terminal domain-like 11
NAD(P)-binding Rossmann-fold domains Acyl-CoA N-acyltransferases (Nat) 11
4Fe-4S ferredoxins ADC-like 11
Nucleic acid-binding proteins ArfGap/RecO-like zinc finger 11
Quinoprotein alcohol dehydrogenase-like Cytochrome c 11
Insert subdomain of RNA polymerase alpha subunit RBP11-like subunits of RNA polymerase 11
Single hybrid motif FAD/NAD(P)-binding domain 11
Riboflavin synthase domain-like Riboflavin synthase domain-like 11
CheY-like EAL domain-like 11
S13-like H2TH domain Glucocorticoid receptor-like (DNA-binding domain) 11
Class I glutamine amidotransferase-like GMP synthetase C-terminal dimerisation domain 11
PYP-like sensor domain (PAS domain) C-terminal effector domain of the bipartite response regulators 11
N-terminal domain of DnaB helicase Homing endonucleases 11
Ribosomal protein S5 domain 2-like DNA mismatch repair protein MutL 11
P-loop containing nucleoside triphosphate hydrolases CarD-like 11
P-loop containing nucleoside triphosphate hydrolases FKBP-like 11
DNA clamp DNA clamp 11
Eukaryotic type KH-domain (KH-domain type I) Nucleic acid-binding proteins 11
S-adenosylmethionine synthetase S-adenosylmethionine synthetase 11
Rubredoxin-like Nucleotide-binding domain 11
Fe,Mn superoxide dismutase (SOD), N-terminal domain Rhodanese/Cell cycle control phosphatase 11
PurM N-terminal domain-like Class I glutamine amidotransferase-like 11
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase DNA mismatch repair protein MutL 11
Tex N-terminal region-like Ribonuclease H-like 11
DNA ligase/mRNA capping enzyme, catalytic domain BRCT domain 11
Putative DNA-binding domain Initiation factor IF2/eIF5b, domain 3 11
Nucleotidylyl transferase An anticodon-binding domain of class I aminoacyl-tRNA synthetases 11
PreATP-grasp domain Carbamoyl phosphate synthetase, large subunit connection domain 11
PheT/TilS domain Anticodon-binding domain of PheRS 11
Galactose mutarotase-like E set domains 11
"Winged helix" DNA-binding domain Actin-like ATPase domain 11
Cysteine proteinases TPR-like 11
PPK N-terminal domain-like Phospholipase D/nuclease 11
Adenine nucleotide alpha hydrolases-like Argininosuccinate synthetase, C-terminal domain 11
RmlC-like cupins Homeodomain-like 11
ADC synthase D-aminoacid aminotransferase-like PLP-dependent enzymes 11
Nudix Metallo-hydrolase/oxidoreductase 11
Sensory domain-like GAF domain-like 11
Regulatory protein AraC Homeodomain-like 11
PreATP-grasp domain Methylglyoxal synthase-like 11
Cytochrome c oxidase subunit II-like, transmembrane region Cytochrome c 11
Cobalamin (vitamin B12)-binding domain Radical SAM enzymes 11
alpha-helical ferredoxin Nucleotide-binding domain 11
TGS-like Class II aaRS and biotin synthetases 11
Translation proteins Translation proteins 11
Glutathione synthetase ATP-binding domain-like Acyl-CoA N-acyltransferases (Nat) 11
EPT/RTPC-like EPT/RTPC-like 11
Ligand-binding domain in the NO signalling and Golgi transport P-loop containing nucleoside triphosphate hydrolases 11
Methionyl-tRNA synthetase (MetRS), Zn-domain Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 11
Translation proteins Initiation factor IF2/eIF5b, domain 3 11
Single hybrid motif Single hybrid motif 11
"Winged helix" DNA-binding domain NagB/RpiA/CoA transferase-like 11
Glutathione synthetase ATP-binding domain-like Carbamoyl phosphate synthetase, large subunit connection domain 11
"Winged helix" DNA-binding domain S-adenosyl-L-methionine-dependent methyltransferases 11
Homodimeric domain of signal transducing histidine kinase Homodimeric domain of signal transducing histidine kinase 11
2Fe-2S ferredoxin-like CO dehydrogenase flavoprotein C-terminal domain-like 11
CheY-like Methylesterase CheB, C-terminal domain 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) Alpha subunit of glutamate synthase, C-terminal domain 11
Succinyl-CoA synthetase domains Acyl-CoA N-acyltransferases (Nat) 11
Periplasmic binding protein-like II Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain 11
Adenine nucleotide alpha hydrolases-like Adenine nucleotide alpha hydrolases-like 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) SIS domain 11
Translation proteins PRC-barrel domain 11
Nucleotidylyl transferase tRNA-binding arm 11
FKBP-like FKBP-like 11
Tex N-terminal region-like RuvA domain 2-like 11
Putative DNA-binding domain Anticodon-binding domain of PheRS 11
DNA repair protein MutS, domain II P-loop containing nucleoside triphosphate hydrolases 11
DNA repair protein MutS, domain I DNA repair protein MutS, domain II 11
YjeF N-terminal domain-like Ribokinase-like 11
DNA repair protein MutS, domain I P-loop containing nucleoside triphosphate hydrolases 11
P-loop containing nucleoside triphosphate hydrolases Helical scaffold and wing domains of SecA 11
NusB-like S-adenosyl-L-methionine-dependent methyltransferases 11
Nucleotide cyclase Histidine-containing phosphotransfer domain, HPT domain 11
Nucleotidylyl transferase Nucleic acid-binding proteins 11
Nucleotide cyclase TPR-like 11
PurS-like Class I glutamine amidotransferase-like 11
CO dehydrogenase ISP C-domain like CO dehydrogenase flavoprotein C-terminal domain-like 11
P-loop containing nucleoside triphosphate hydrolases Prokaryotic type I DNA topoisomerase 11
a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) 11
Nucleic acid-binding proteins Anticodon-binding domain of PheRS 11
ValRS/IleRS/LeuRS editing domain tRNA-binding arm 11
Cobalamin (vitamin B12)-binding domain Methionine synthase activation domain-like 11
Acyl-CoA dehydrogenase C-terminal domain-like GroES-like 11
Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 Nucleic acid-binding proteins 11
P-loop containing nucleoside triphosphate hydrolases Homing endonucleases 11
Class II aaRS and biotin synthetases Anticodon-binding domain of PheRS 11
CheY-like SpoIIaa-like 11
NAD(P)-binding Rossmann-fold domains 1-deoxy-D-xylulose-5-phosphate reductoisomerase, C-terminal domain 11
Methionyl-tRNA synthetase (MetRS), Zn-domain Nucleic acid-binding proteins 11
Ribonuclease PH domain 2-like Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 11
Succinyl-CoA synthetase domains Succinyl-CoA synthetase domains 11
Methionine synthase domain Methionine synthase activation domain-like 11
HMA, heavy metal-associated domain FAD/NAD(P)-binding domain 11
Rho N-terminal domain-like Nucleic acid-binding proteins 11
MalF N-terminal region-like MetI-like 11
P-loop containing nucleoside triphosphate hydrolases Signal peptide-binding domain 11
DNA repair protein MutS, domain III P-loop containing nucleoside triphosphate hydrolases 11
PHP domain-like P-loop containing nucleoside triphosphate hydrolases 11
MOSC N-terminal domain-like PK beta-barrel domain-like 11
PHP14-like Phospholipase D/nuclease 11
Calcium ATPase, transduction domain A Metal cation-transporting ATPase, ATP-binding domain N 11
S-adenosyl-L-methionine-dependent methyltransferases TPR-like 11
NAD(P)-binding Rossmann-fold domains LDH C-terminal domain-like 11
Nucleic acid-binding proteins Rad51 N-terminal domain-like 11
S-adenosyl-L-methionine-dependent methyltransferases P-loop containing nucleoside triphosphate hydrolases 11
ACP-like Acetyl-CoA synthetase-like 11
Sigma3 and sigma4 domains of RNA polymerase sigma factors Sigma3 and sigma4 domains of RNA polymerase sigma factors 11
Tex N-terminal region-like Nucleic acid-binding proteins 11
Nucleotidylyl transferase YegP-like 11
Nucleic acid-binding proteins GAD domain-like 11
Rubredoxin-like FAD/NAD(P)-binding domain 11
Prokaryotic type KH domain (KH-domain type II) Ribosomal protein S3 C-terminal domain 11
Nqo5-like HydB/Nqo4-like 11
Putative DNA-binding domain Translation proteins 11
lambda repressor-like DNA-binding domains P-loop containing nucleoside triphosphate hydrolases 11
Thiolase-like ACP-like 11
Pheromone-binding domain of LuxR-like quorum-sensing transcription factors C-terminal effector domain of the bipartite response regulators 11
GroEL equatorial domain-like GroEL-intermediate domain like 11
RuvA domain 2-like DNA helicase RuvA subunit, C-terminal domain 11
MFS general substrate transporter S-adenosyl-L-methionine-dependent methyltransferases 11
Methionyl-tRNA synthetase (MetRS), Zn-domain Nucleotidylyl transferase 11
Putative DNA-binding domain Ribonuclease H-like 11
Rho N-terminal domain-like P-loop containing nucleoside triphosphate hydrolases 11
PPK N-terminal domain-like PHP14-like 11
Class II aaRS and biotin synthetases YbaK/ProRS associated domain 11
Translation initiation factor IF3, N-terminal domain Translation initiation factor IF3, C-terminal domain 11
P-loop containing nucleoside triphosphate hydrolases Pre-protein crosslinking domain of SecA 11
"Winged helix" DNA-binding domain SCP-like 11
Mechanosensitive channel protein MscS (YggB), transmembrane region Sm-like ribonucleoproteins 11
FMN-binding split barrel Acyl-CoA N-acyltransferases (Nat) 11
FAD-linked oxidoreductase ALDH-like 11
Ribonuclease PH domain 2-like Ribonuclease PH domain 2-like 11
Lysozyme-like LysM domain 11
Molybdenum cofactor-binding domain Cytochrome c 11
Glutathione synthetase ATP-binding domain-like Methylglyoxal synthase-like 11
Heme-dependent catalase-like Class I glutamine amidotransferase-like 11
Metallo-hydrolase/oxidoreductase Rhodanese/Cell cycle control phosphatase 11
DnaJ/Hsp40 cysteine-rich domain HSP40/DnaJ peptide-binding domain 11
N-utilization substance G protein NusG, N-terminal domain Translation proteins SH3-like domain 11
DNA/RNA polymerases Lesion bypass DNA polymerase (Y-family), little finger domain 11
PK beta-barrel domain-like Phosphoenolpyruvate/pyruvate domain 11
PurS-like FGAM synthase PurL, linker domain 11
PLP-dependent transferases PLP-dependent transferases 11
Acyl-CoA dehydrogenase C-terminal domain-like NAD(P)-binding Rossmann-fold domains 11
Cytidine deaminase-like alpha/beta-Hydrolases 11
PK beta-barrel domain-like PK C-terminal domain-like 11
Xylose isomerase-like Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 11
Adenine nucleotide alpha hydrolases-like DHS-like NAD/FAD-binding domain 11
Nucleic acid-binding proteins DNA helicase RuvA subunit, C-terminal domain 11
L9 N-domain-like Ribosomal protein L9 C-domain 11
Fe,Mn superoxide dismutase (SOD), C-terminal domain Rhodanese/Cell cycle control phosphatase 11
5' to 3' exonuclease, C-terminal subdomain Ribonuclease H-like 11
Nitrite and sulphite reductase 4Fe-4S domain-like Nitrite and sulphite reductase 4Fe-4S domain-like 11
Putative DNA-binding domain Class II aaRS and biotin synthetases 11
Translation proteins ThrRS/AlaRS common domain 11
Nucleotidylyl transferase Ribosomal protein L25-like 11
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase HSP90 C-terminal domain 11
Thioredoxin-like Nqo1 middle domain-like 11
Galactose mutarotase-like Galactose mutarotase-like 11
Acyl-CoA dehydrogenase NM domain-like NAD(P)-binding Rossmann-fold domains 11
Rad51 N-terminal domain-like Rad51 N-terminal domain-like 11
P-loop containing nucleoside triphosphate hydrolases TrpR-like 11
Ribonuclease PH domain 2-like Nucleic acid-binding proteins 11
P-loop containing nucleoside triphosphate hydrolases CBS-domain pair 11
TGS-like ThrRS/AlaRS common domain 11
GroEL-intermediate domain like GroEL apical domain-like 11
Sm-like ribonucleoproteins Mechanosensitive channel protein MscS (YggB), C-terminal domain 11
Thioredoxin-like FAD/NAD(P)-binding domain 11
Trigger factor ribosome-binding domain FKBP-like 11
Bacterial muramidases Lysozyme-like 11
Ribosomal L11/L12e N-terminal domain Ribosomal protein L11, C-terminal domain 11
Sensory domain-like PYP-like sensor domain (PAS domain) 11
Cation efflux protein transmembrane domain-like Cation efflux protein cytoplasmic domain-like 11
Heme-dependent peroxidases Heme-dependent peroxidases 11
S-adenosyl-L-methionine-dependent methyltransferases Putative methyltransferase TM0872, insert domain 11
PIN domain-like P-loop containing nucleoside triphosphate hydrolases 11
Insert subdomain of RNA polymerase alpha subunit C-terminal domain of RNA polymerase alpha subunit 11
beta-Roll beta-Roll 11
CBS-domain pair Inosine monophosphate dehydrogenase (IMPDH) 11
Fumarylacetoacetate hydrolase, FAH, N-terminal domain FAH 11
FGAM synthase PurL, linker domain PurM C-terminal domain-like 11
R1 subunit of ribonucleotide reductase, N-terminal domain PFL-like glycyl radical enzymes 11
Formyltransferase FMT C-terminal domain-like 11
Transcription factor NusA, N-terminal domain Prokaryotic type KH domain (KH-domain type II) 11
UraD-Like Zn-dependent exopeptidases 11
YegP-like YegP-like 11
P-loop containing nucleoside triphosphate hydrolases ACT-like 11
Adenine nucleotide alpha hydrolases-like GMP synthetase C-terminal dimerisation domain 11
Zinc beta-ribbon DNA primase core 11
Chorismate mutase II ACT-like 11
DNA ligase/mRNA capping enzyme, catalytic domain RuvA domain 2-like 11
Ligand-binding domain in the NO signalling and Golgi transport Homeodomain-like 11
Transcription factor NusA, N-terminal domain Nucleic acid-binding proteins 11
Folate-binding domain Aminomethyltransferase beta-barrel domain 11
Mechanosensitive channel protein MscS (YggB), transmembrane region Mechanosensitive channel protein MscS (YggB), C-terminal domain 11
Cytidine deaminase-like Cytidine deaminase-like 11
GIY-YIG endonuclease C-terminal UvrC-binding domain of UvrB 11
Acyl-CoA dehydrogenase NM domain-like GroES-like 11
P-loop containing nucleoside triphosphate hydrolases RecA protein, C-terminal domain 11
N-terminal domain of bifunctional PutA protein ALDH-like 11
Homeodomain-like DNA-glycosylase 11
4Fe-4S ferredoxins Respiratory nitrate reductase 1 gamma chain 11
Chorismate mutase II Periplasmic binding protein-like II 11
FAD/NAD(P)-binding domain Nitrite and sulphite reductase 4Fe-4S domain-like 11
Ribosomal protein S5 domain 2-like Eukaryotic type KH-domain (KH-domain type I) 11
Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases tRNA-binding arm 11
Chaperone J-domain HSC20 (HSCB), C-terminal oligomerisation domain 11
Obg GTP-binding protein N-terminal domain P-loop containing nucleoside triphosphate hydrolases 11
UBA-like Elongation factor Ts (EF-Ts), dimerisation domain 11
FabD/lysophospholipase-like Probable ACP-binding domain of malonyl-CoA ACP transacylase 11
PDZ domain-like ClpP/crotonase 11
Thiamin diphosphate-binding fold (THDP-binding) Pyruvate-ferredoxin oxidoreductase, PFOR, domain III 11
Thioredoxin-like Nqo1C-terminal domain-like 11
PIN domain-like 5' to 3' exonuclease, C-terminal subdomain 11
Thioesterase/thiol ester dehydrase-isomerase Acyl-CoA N-acyltransferases (Nat) 11
Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain Nucleotidylyl transferase 11
Macro domain-like Zn-dependent exopeptidases 11
Carbamate kinase-like ACT-like 11
FMN-linked oxidoreductases Nucleotide-binding domain 11
"Winged helix" DNA-binding domain LexA/Signal peptidase 11
PheT/TilS domain Class II aaRS and biotin synthetases 11
Nucleic acid-binding proteins Prokaryotic type KH domain (KH-domain type II) 11
CarD-like TRCF domain-like 11
FabD/lysophospholipase-like ACP-like 11
Globin-like Riboflavin synthase domain-like 11
PurM C-terminal domain-like Class I glutamine amidotransferase-like 11
2Fe-2S ferredoxin-like ADC-like 11
Carbamoyl phosphate synthetase, large subunit connection domain Methylglyoxal synthase-like 11
Transcription factor NusA, N-terminal domain Rad51 N-terminal domain-like 11
Ada DNA repair protein, N-terminal domain (N-Ada 10) DNA-glycosylase 11
Dihydropteroate synthetase-like Cobalamin (vitamin B12)-binding domain 11
TGS-like ACT-like 11
P-loop containing nucleoside triphosphate hydrolases TRCF domain-like 11
Carbamate kinase-like Acyl-CoA N-acyltransferases (Nat) 11
P-loop containing nucleoside triphosphate hydrolases Hypothetical protein YjiA, C-terminal domain 11
Nucleotidyltransferase Nucleotidyltransferase 11
Dihydropteroate synthetase-like Methionine synthase domain 11
Pre-protein crosslinking domain of SecA Helical scaffold and wing domains of SecA 11
Ada DNA repair protein, N-terminal domain (N-Ada 10) Homeodomain-like 11
FGAM synthase PurL, linker domain PurM N-terminal domain-like 11
Diaminopimelate epimerase-like Periplasmic binding protein-like II 11
P-loop containing nucleoside triphosphate hydrolases PGBD-like 11
ACP-like Glycerol-3-phosphate (1)-acyltransferase 11
Ribosomal protein S5 domain 2-like Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 11
FGAM synthase PurL, linker domain Class I glutamine amidotransferase-like 11
Nucleotide-binding domain FAD-linked reductases, C-terminal domain 11
PP2C-like Protein kinase-like (PK-like) 11
Ribonuclease PH domain 2-like Eukaryotic type KH-domain (KH-domain type I) 11
Homing endonucleases PFL-like glycyl radical enzymes 11
GIY-YIG endonuclease RuvA domain 2-like 11
RNase III domain-like dsRNA-binding domain-like 11
FAD/NAD(P)-binding domain Nitrite/Sulfite reductase N-terminal domain-like 11
RBP11-like subunits of RNA polymerase C-terminal domain of RNA polymerase alpha subunit 11
Protease propeptides/inhibitors Subtilisin-like 11
4Fe-4S ferredoxins Riboflavin synthase domain-like 11
Glutamyl tRNA-reductase catalytic, N-terminal domain NAD(P)-binding Rossmann-fold domains 11
Class I glutamine amidotransferase-like LD-carboxypeptidase A C-terminal domain-like 11
PUA domain-like alpha/beta knot 11
PIN domain-like Ribonuclease H-like 11
DNA methylase specificity domain DNA methylase specificity domain 11
Ada DNA repair protein, N-terminal domain (N-Ada 10) TATA-box binding protein-like 11
HMA, heavy metal-associated domain FAD/NAD-linked reductases, dimerisation (C-terminal) domain 11
PreATP-grasp domain PreATP-grasp domain 11
Prokaryotic type KH domain (KH-domain type II) Prokaryotic type KH domain (KH-domain type II) 11
SpoIIaa-like cAMP-binding domain-like 11
Ribosomal protein S5 domain 2-like GHMP Kinase, C-terminal domain 11
P-loop containing nucleoside triphosphate hydrolases HRDC-like 11
Domain of the SRP/SRP receptor G-proteins P-loop containing nucleoside triphosphate hydrolases 11
alpha/beta-Hydrolases PRTase-like 11
Methionine synthase domain Cobalamin (vitamin B12)-binding domain 11
Galactose mutarotase-like Six-hairpin glycosidases 11
PurM N-terminal domain-like PurM N-terminal domain-like 11
Ribosomal protein L7/12, oligomerisation (N-terminal) domain ClpS-like 11
2Fe-2S ferredoxin-like FAD-binding/transporter-associated domain-like 11
PurS-like PurM C-terminal domain-like 11
FMN-binding split barrel GAF domain-like 11
ClpP/crotonase NfeD domain-like 11
Class I glutamine amidotransferase-like Adenine nucleotide alpha hydrolases-like 11
Transmembrane di-heme cytochromes a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) 11
P-loop containing nucleoside triphosphate hydrolases Prokaryotic type KH domain (KH-domain type II) 11
beta-lactamase/transpeptidase-like Penicillin-binding protein associated domain 11
DNA-glycosylase Nudix 11
Homeodomain-like TATA-box binding protein-like 11
Carbon-nitrogen hydrolase Adenine nucleotide alpha hydrolases-like 11
Thiol:disulfide interchange protein DsbD, N-terminal domain (DsbD-alpha) Thioredoxin-like 11
Phosphoenolpyruvate/pyruvate domain PK C-terminal domain-like 11
Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain Phosphoenolpyruvate/pyruvate domain 11
Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 Eukaryotic type KH-domain (KH-domain type I) 11
Phage tail proteins Phage tail proteins 11
Prokaryotic type I DNA topoisomerase SWIB/MDM2 domain 11
Prim-pol domain P-loop containing nucleoside triphosphate hydrolases 11
YrdC/RibB RibA-like 11
Nucleic acid-binding proteins S-adenosyl-L-methionine-dependent methyltransferases 11
FAD-binding/transporter-associated domain-like Uridine diphospho-N-Acetylenolpyruvylglucosamine reductase, MurB, C-terminal domain 11
PLP-dependent transferases Ornithine decarboxylase C-terminal domain 11
Ribosomal protein S5 domain 2-like HSP90 C-terminal domain 11
6-phosphogluconate dehydrogenase C-terminal domain-like UDP-glucose/GDP-mannose dehydrogenase C-terminal domain 11
Trigger factor ribosome-binding domain Triger factor/SurA peptide-binding domain-like 11
post-HMGL domain-like 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain 11
NAD(P)-binding Rossmann-fold domains Glutamyl tRNA-reductase dimerization domain 11
MFS general substrate transporter Glycerol-3-phosphate (1)-acyltransferase 11
Dihydropteroate synthetase-like Methionine synthase activation domain-like 11
Ferritin-like Calcium ATPase, transduction domain A 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) Adenine nucleotide alpha hydrolases-like 11
Class II aaRS and biotin synthetases Translation proteins 11
Cobalamin (vitamin B12)-binding domain P-loop containing nucleoside triphosphate hydrolases 11
4Fe-4S ferredoxins Ferredoxin reductase-like, C-terminal NADP-linked domain 11
Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) Translation proteins 11
PurS-like PurM N-terminal domain-like 11
Metallo-dependent phosphatases 5'-nucleotidase (syn. UDP-sugar hydrolase), C-terminal domain 11
HCP-like Lysozyme-like 11
Fic-like "Winged helix" DNA-binding domain 11
NAD(P)-binding Rossmann-fold domains Glutathione synthetase ATP-binding domain-like 11
5' to 3' exonuclease, C-terminal subdomain DNA/RNA polymerases 11
Thiolase-like FabD/lysophospholipase-like 11
Protein kinase-like (PK-like) Protein kinase-like (PK-like) 11
Single hybrid motif FAD/NAD-linked reductases, dimerisation (C-terminal) domain 11
Nucleotidyltransferase substrate binding subunit/domain ACT-like 11
Globin-like Ferredoxin reductase-like, C-terminal NADP-linked domain 11
Prim-pol domain "Winged helix" DNA-binding domain 11

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