SUPERFAMILY 1.75 HMM library and genome assignments server

Domain combination pairs in Azospirillum brasilense Sp245

All pairs of domain combinations at the superfamily level are listed here.
The identification of domain pairs does not account for the possibility of non-contiguous domains. Inserted, or interlaced, domains are seen as having a simple pair ordering.

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Adjacent domain pairs graph

Graph of adjacent domain pairs.


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Domain combination pairs

782 domain combination pairs.
Click on a column heading to sort that column, or the 'View' button to see domain architetures for that domain pair combination.

Superfamily (N) Superfamily (C) Number of occurrances Number unique
Homodimeric domain of signal transducing histidine kinase ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 10454
"Winged helix" DNA-binding domain Periplasmic binding protein-like II 642
PYP-like sensor domain (PAS domain) ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 6138
CheY-like ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 5335
PYP-like sensor domain (PAS domain) Homodimeric domain of signal transducing histidine kinase 5332
CheY-like Homodimeric domain of signal transducing histidine kinase 5133
PYP-like sensor domain (PAS domain) PYP-like sensor domain (PAS domain) 4534
P-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases 4115
PYP-like sensor domain (PAS domain) CheY-like 3725
CheY-like C-terminal effector domain of the bipartite response regulators 345
NAD(P)-binding Rossmann-fold domains 6-phosphogluconate dehydrogenase C-terminal domain-like 315
"Winged helix" DNA-binding domain GntR ligand-binding domain-like 281
Multidrug resistance efflux transporter EmrE Multidrug resistance efflux transporter EmrE 274
UDP-Glycosyltransferase/glycogen phosphorylase TPR-like 268
Sigma2 domain of RNA polymerase sigma factors Sigma3 and sigma4 domains of RNA polymerase sigma factors 224
P-loop containing nucleoside triphosphate hydrolases MOP-like 223
beta-Roll beta-Roll 2013
ABC transporter transmembrane region P-loop containing nucleoside triphosphate hydrolases 194
TPR-like TPR-like 1910
Homeodomain-like Tetracyclin repressor-like, C-terminal domain 182
CheY-like Histidine-containing phosphotransfer domain, HPT domain 1614
cAMP-binding domain-like "Winged helix" DNA-binding domain 161
Multidrug efflux transporter AcrB transmembrane domain Multidrug efflux transporter AcrB transmembrane domain 167
GAF domain-like ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 1515
Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains 157
Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains Multidrug efflux transporter AcrB transmembrane domain 157
Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains Multidrug efflux transporter AcrB transmembrane domain 157
Acyl-CoA dehydrogenase NM domain-like Acyl-CoA dehydrogenase C-terminal domain-like 153
Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains 157
Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) 145
GroES-like NAD(P)-binding Rossmann-fold domains 143
Metallo-dependent hydrolases Composite domain of metallo-dependent hydrolases 147
PYP-like sensor domain (PAS domain) Nucleotide cyclase 1410
NAD(P)-binding Rossmann-fold domains Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 145
P-loop containing nucleoside triphosphate hydrolases Homeodomain-like 147
CheY-like CheY-like 1313
"Winged helix" DNA-binding domain GAF domain-like 131
PYP-like sensor domain (PAS domain) GAF domain-like 1313
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase Histidine-containing phosphotransfer domain, HPT domain 1311
Homodimeric domain of signal transducing histidine kinase Histidine-containing phosphotransfer domain, HPT domain 1311
Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains 124
Thioredoxin-like GST C-terminal domain-like 122
HAMP domain-like ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 128
HAMP domain-like Homodimeric domain of signal transducing histidine kinase 128
GAF domain-like Homodimeric domain of signal transducing histidine kinase 1212
PYP-like sensor domain (PAS domain) EAL domain-like 117
Zn-dependent exopeptidases Bacterial exopeptidase dimerisation domain 111
P-loop containing nucleoside triphosphate hydrolases Translation proteins 116
Thiolase-like Thiolase-like 101
FAD/NAD(P)-binding domain FAD-linked reductases, C-terminal domain 104
CheY-like Homeodomain-like 103
Nucleotide cyclase EAL domain-like 107
Formate/glycerate dehydrogenase catalytic domain-like NAD(P)-binding Rossmann-fold domains 102
Formate dehydrogenase/DMSO reductase, domains 1-3 ADC-like 104
Actin-like ATPase domain Actin-like ATPase domain 102
PreATP-grasp domain Glutathione synthetase ATP-binding domain-like 105
Thiamin diphosphate-binding fold (THDP-binding) TK C-terminal domain-like 95
CheY-like P-loop containing nucleoside triphosphate hydrolases 93
Pentapeptide repeat-like Pentapeptide repeat-like 93
ParB/Sulfiredoxin KorB DNA-binding domain-like 91
Aminoacid dehydrogenase-like, N-terminal domain NAD(P)-binding Rossmann-fold domains 83
(Trans)glycosidases Glycosyl hydrolase domain 86
PYP-like sensor domain (PAS domain) Histidine-containing phosphotransfer domain, HPT domain 86
GAF domain-like CheY-like 88
Nucleic acid-binding proteins Nucleic acid-binding proteins 84
FAD-binding/transporter-associated domain-like FAD-linked oxidases, C-terminal domain 73
lambda repressor-like DNA-binding domains Periplasmic binding protein-like I 71
MetI-like MetI-like 74
2Fe-2S ferredoxin-like CO dehydrogenase ISP C-domain like 73
Enolase N-terminal domain-like Enolase C-terminal domain-like 71
P-loop containing nucleoside triphosphate hydrolases Ribosomal protein S5 domain 2-like 75
Homeodomain-like Homeodomain-like 75
Glutathione synthetase ATP-binding domain-like Rudiment single hybrid motif 62
Thiamin diphosphate-binding fold (THDP-binding) DHS-like NAD/FAD-binding domain 61
CheY-like Nucleotide cyclase 64
"Winged helix" DNA-binding domain PLP-dependent transferases 61
TPR-like S-adenosyl-L-methionine-dependent methyltransferases 63
PreATP-grasp domain Rudiment single hybrid motif 62
"Winged helix" DNA-binding domain Dimeric alpha+beta barrel 61
Chemotaxis receptor methyltransferase CheR, N-terminal domain S-adenosyl-L-methionine-dependent methyltransferases 64
Acetyl-CoA synthetase-like ACP-like 65
P-loop containing nucleoside triphosphate hydrolases EF-G C-terminal domain-like 63
Trypsin-like serine proteases PDZ domain-like 62
Nucleotidylyl transferase Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 64
Translation proteins EF-G C-terminal domain-like 63
FAD-binding/transporter-associated domain-like CO dehydrogenase flavoprotein C-terminal domain-like 52
Adenine nucleotide alpha hydrolases-like Adenine nucleotide alpha hydrolases-like 51
MoeA N-terminal region -like Molybdenum cofactor biosynthesis proteins 52
HAMP domain-like PYP-like sensor domain (PAS domain) 55
Molybdenum cofactor biosynthesis proteins MoeA C-terminal domain-like 52
CO dehydrogenase molybdoprotein N-domain-like Molybdenum cofactor-binding domain 51
6-phosphogluconate dehydrogenase C-terminal domain-like UDP-glucose/GDP-mannose dehydrogenase C-terminal domain 52
NAD(P)-binding Rossmann-fold domains UDP-glucose/GDP-mannose dehydrogenase C-terminal domain 52
EF-G C-terminal domain-like EF-G C-terminal domain-like 52
beta-Roll CalX-like 54
Riboflavin synthase domain-like Ferredoxin reductase-like, C-terminal NADP-linked domain 55
ACT-like ACT-like 54
Calcium ATPase, transduction domain A HAD-like 55
MurD-like peptide ligases, catalytic domain MurD-like peptide ligases, peptide-binding domain 53
PLP-binding barrel Alanine racemase C-terminal domain-like 52
Double Clp-N motif P-loop containing nucleoside triphosphate hydrolases 51
Cytochrome c Cytochrome c 54
MoeA N-terminal region -like MoeA C-terminal domain-like 52
UDP-Glycosyltransferase/glycogen phosphorylase UDP-Glycosyltransferase/glycogen phosphorylase 55
Sm-like ribonucleoproteins Mechanosensitive channel protein MscS (YggB), C-terminal domain 53
TrkA C-terminal domain-like TrkA C-terminal domain-like 52
HAMP domain-like CheY-like 55
E set domains (Trans)glycosidases 54
CoA-dependent acyltransferases Acetyl-CoA synthetase-like 54
PYP-like sensor domain (PAS domain) Methyl-accepting chemotaxis protein (MCP) signaling domain 43
Triger factor/SurA peptide-binding domain-like FKBP-like 44
Mechanosensitive channel protein MscS (YggB), transmembrane region Sm-like ribonucleoproteins 42
lambda repressor-like DNA-binding domains RmlC-like cupins 41
"Winged helix" DNA-binding domain Chorismate lyase-like 42
Lysozyme-like beta-lactamase/transpeptidase-like 43
CheY-like Methylesterase CheB, C-terminal domain 41
Globin-like Methyl-accepting chemotaxis protein (MCP) signaling domain 42
Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain Phosphohistidine domain 44
Calcium ATPase, transduction domain A Calcium ATPase, transmembrane domain M 44
TPR-like Nucleotide-diphospho-sugar transferases 44
PDZ domain-like ClpP/crotonase 42
Ribosomal protein S5 domain 2-like EF-G C-terminal domain-like 42
E set domains Glycosyl hydrolase domain 43
L30e-like alpha/beta knot 41
Diaminopimelate epimerase-like Diaminopimelate epimerase-like 41
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase Ribosomal protein S5 domain 2-like 44
CalX-like CalX-like 43
HlyD-like secretion proteins HlyD-like secretion proteins 42
Acyl-CoA N-acyltransferases (Nat) Acyl-CoA N-acyltransferases (Nat) 41
Rhodanese/Cell cycle control phosphatase Rhodanese/Cell cycle control phosphatase 42
Calcium ATPase, transmembrane domain M HAD-like 44
PurM N-terminal domain-like PurM C-terminal domain-like 42
Mechanosensitive channel protein MscS (YggB), transmembrane region Mechanosensitive channel protein MscS (YggB), C-terminal domain 42
P-loop containing nucleoside triphosphate hydrolases EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 42
Methyl-accepting chemotaxis protein (MCP) signaling domain PilZ domain-like 43
Sensory domain-like Methyl-accepting chemotaxis protein (MCP) signaling domain 44
LuxS/MPP-like metallohydrolase LuxS/MPP-like metallohydrolase 41
CoA-dependent acyltransferases ACP-like 43
Translation proteins EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 42
Phosphohistidine domain Phosphoenolpyruvate/pyruvate domain 44
FAD/NAD(P)-binding domain FAD/NAD-linked reductases, dimerisation (C-terminal) domain 41
RmlC-like cupins Homeodomain-like 42
Metalloproteases ("zincins"), catalytic domain beta-Roll 42
Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain Phosphoenolpyruvate/pyruvate domain 33
PYP-like sensor domain (PAS domain) Homeodomain-like 32
GroEL equatorial domain-like GroEL apical domain-like 31
Thioesterase/thiol ester dehydrase-isomerase Thioesterase/thiol ester dehydrase-isomerase 31
Homeodomain-like Ribonuclease H-like 31
Chaperone J-domain HSP40/DnaJ peptide-binding domain 32
Nucleotide-diphospho-sugar transferases Nucleotide-diphospho-sugar transferases 33
Nucleotidylyl transferase An anticodon-binding domain of class I aminoacyl-tRNA synthetases 31
Sensory domain-like ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 33
HAMP domain-like Methyl-accepting chemotaxis protein (MCP) signaling domain 33
Class II aaRS and biotin synthetases Class II aaRS ABD-related 33
Sensory domain-like HAMP domain-like 33
PK beta-barrel domain-like PK C-terminal domain-like 31
HAMP domain-like Nucleotide cyclase 32
UDP-Glycosyltransferase/glycogen phosphorylase Nucleotide-diphospho-sugar transferases 33
ValRS/IleRS/LeuRS editing domain Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 33
FAD/NAD(P)-binding domain FAD/NAD(P)-binding domain 33
HSP40/DnaJ peptide-binding domain HSP40/DnaJ peptide-binding domain 32
ValRS/IleRS/LeuRS editing domain Nucleotidylyl transferase 33
Sensory domain-like Homodimeric domain of signal transducing histidine kinase 33
Translation proteins Ribosomal protein S5 domain 2-like 31
Nqo1 FMN-binding domain-like Nqo1C-terminal domain-like 33
Alpha-L RNA-binding motif Pseudouridine synthase 32
Succinyl-CoA synthetase domains Glutathione synthetase ATP-binding domain-like 32
Glutathione synthetase ATP-binding domain-like Acyl-CoA N-acyltransferases (Nat) 33
Composite domain of metallo-dependent hydrolases Composite domain of metallo-dependent hydrolases 32
Nucleotide-diphospho-sugar transferases Trimeric LpxA-like enzymes 31
P-loop containing nucleoside triphosphate hydrolases Class I glutamine amidotransferase-like 31
Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like 32
PDZ domain-like PDZ domain-like 31
lambda repressor-like DNA-binding domains P-loop containing nucleoside triphosphate hydrolases 31
Phosphoglucomutase, first 3 domains Phosphoglucomutase, C-terminal domain 31
Phosphoenolpyruvate/pyruvate domain PK C-terminal domain-like 31
Class I glutamine amidotransferase-like Homeodomain-like 31
Adenine nucleotide alpha hydrolases-like DHS-like NAD/FAD-binding domain 31
Nitrite/Sulfite reductase N-terminal domain-like Nitrite and sulphite reductase 4Fe-4S domain-like 33
NAD(P)-binding Rossmann-fold domains NAD(P)-binding Rossmann-fold domains 33
Aconitase iron-sulfur domain LeuD/IlvD-like 32
Cupredoxins Cupredoxins 32
Phosphoglucomutase, first 3 domains Phosphoglucomutase, first 3 domains 31
GAF domain-like Nucleotide cyclase 33
Nqo1 FMN-binding domain-like Nqo1 middle domain-like 33
NAD(P)-binding Rossmann-fold domains Succinyl-CoA synthetase domains 32
CoA-dependent acyltransferases CoA-dependent acyltransferases 32
PK beta-barrel domain-like Phosphoenolpyruvate/pyruvate domain 31
(Trans)glycosidases (Trans)glycosidases 33
RuvA domain 2-like Nucleic acid-binding proteins 33
GroEL equatorial domain-like GroEL-intermediate domain like 31
P-loop containing nucleoside triphosphate hydrolases post-AAA+ oligomerization domain-like 32
CheY-like HD-domain/PDEase-like 33
PYP-like sensor domain (PAS domain) P-loop containing nucleoside triphosphate hydrolases 32
NAD(P)-binding Rossmann-fold domains LDH C-terminal domain-like 31
ClpP/crotonase ClpP/crotonase 32
Phospholipase D/nuclease Phospholipase D/nuclease 32
P-loop containing nucleoside triphosphate hydrolases Hypothetical protein YjiA, C-terminal domain 31
Nqo1 middle domain-like Nqo1C-terminal domain-like 33
GroEL-intermediate domain like GroEL apical domain-like 31
Integrin alpha N-terminal domain Integrin alpha N-terminal domain 33
Fe,Mn superoxide dismutase (SOD), N-terminal domain Fe,Mn superoxide dismutase (SOD), C-terminal domain 22
Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain 22
Glutathione synthetase ATP-binding domain-like Phosphohistidine domain 22
MurCD N-terminal domain MurD-like peptide ligases, peptide-binding domain 21
Nucleotidyltransferase Poly A polymerase C-terminal region-like 22
Ferredoxin reductase-like, C-terminal NADP-linked domain 2Fe-2S ferredoxin-like 22
Riboflavin synthase domain-like 2Fe-2S ferredoxin-like 22
ABC transporter involved in vitamin B12 uptake, BtuC ABC transporter involved in vitamin B12 uptake, BtuC 21
DNA ligase/mRNA capping enzyme, catalytic domain Nucleic acid-binding proteins 22
Phoshotransferase/anion transport protein Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain 22
UDP-Glycosyltransferase/glycogen phosphorylase S-adenosyl-L-methionine-dependent methyltransferases 22
HCP-like Lysozyme-like 21
N-terminal domain of alpha and beta subunits of F1 ATP synthase P-loop containing nucleoside triphosphate hydrolases 21
Methylated DNA-protein cysteine methyltransferase domain Methylated DNA-protein cysteine methyltransferase, C-terminal domain 22
Class II aaRS and biotin synthetases ThrRS/AlaRS common domain 22
CheY-like "Winged helix" DNA-binding domain 22
Translation initiation factor IF3, N-terminal domain Translation initiation factor IF3, C-terminal domain 21
S-adenosyl-L-methionine-dependent methyltransferases PYP-like sensor domain (PAS domain) 22
2Fe-2S ferredoxin-like 4Fe-4S ferredoxins 22
Sigma3 and sigma4 domains of RNA polymerase sigma factors CheY-like 21
Periplasmic binding protein-like II Homodimeric domain of signal transducing histidine kinase 22
S-adenosyl-L-methionine-dependent methyltransferases S-adenosyl-L-methionine-dependent methyltransferases 22
GIY-YIG endonuclease RuvA domain 2-like 22
GreA transcript cleavage protein, N-terminal domain FKBP-like 21
Nucleic acid-binding proteins P-loop containing nucleoside triphosphate hydrolases 22
Glutamine synthetase, N-terminal domain Glutamine synthetase/guanido kinase 21
GAF domain-like Homeodomain-like 22
Thioesterase/thiol ester dehydrase-isomerase Isocitrate/Isopropylmalate dehydrogenase-like 21
Metallo-dependent phosphatases 5'-nucleotidase (syn. UDP-sugar hydrolase), C-terminal domain 21
Resolvase-like Homeodomain-like 21
Phoshotransferase/anion transport protein HPr-like 22
Ribosomal protein S5 domain 2-like Ribonuclease PH domain 2-like 22
PUA domain-like Ribosomal protein S5 domain 2-like 22
PUA domain-like P-loop containing nucleoside triphosphate hydrolases 22
S-adenosyl-L-methionine-dependent methyltransferases P-loop containing nucleoside triphosphate hydrolases 22
N-terminal domain of alpha and beta subunits of F1 ATP synthase C-terminal domain of alpha and beta subunits of F1 ATP synthase 21
N-terminal domain of DnaB helicase P-loop containing nucleoside triphosphate hydrolases 21
Cupredoxins Cytochrome c 21
Homodimeric domain of signal transducing histidine kinase CheW-like 22
Ribokinase-like Nucleotidylyl transferase 21
Metal cation-transporting ATPase, ATP-binding domain N HAD-like 22
FliG FliG 21
4Fe-4S ferredoxins Formate dehydrogenase/DMSO reductase, domains 1-3 22
HPr-like Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain 22
DNA clamp DNA clamp 21
MurE/MurF N-terminal domain MurD-like peptide ligases, peptide-binding domain 21
Calcium ATPase, transduction domain A Metal cation-transporting ATPase, ATP-binding domain N 22
NTF2-like Sec-C motif 21
CBS-domain pair FAD-binding/transporter-associated domain-like 21
Cation efflux protein transmembrane domain-like Cation efflux protein cytoplasmic domain-like 21
Metal cation-transporting ATPase, ATP-binding domain N Calcium ATPase, transmembrane domain M 22
tRNA-binding arm Class II aaRS and biotin synthetases 21
MurCD N-terminal domain MurD-like peptide ligases, catalytic domain 21
HMA, heavy metal-associated domain Calcium ATPase, transmembrane domain M 22
GAF domain-like P-loop containing nucleoside triphosphate hydrolases 22
Nicotinate/Quinolinate PRTase N-terminal domain-like Nicotinate/Quinolinate PRTase C-terminal domain-like 21
Regulatory protein AraC Homeodomain-like 21
HMA, heavy metal-associated domain Calcium ATPase, transduction domain A 22
2Fe-2S ferredoxin-like Formate dehydrogenase/DMSO reductase, domains 1-3 22
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase Type II DNA topoisomerase 22
beta-Galactosidase/glucuronidase domain (Trans)glycosidases 22
Protein kinase-like (PK-like) (Trans)glycosidases 22
GIY-YIG endonuclease C-terminal UvrC-binding domain of UvrB 22
HPr-like Phosphohistidine domain 22
Integrin alpha N-terminal domain beta-Roll 22
Homeodomain-like SIS domain 21
DinB/YfiT-like putative metalloenzymes C-type lectin-like 22
lambda repressor-like DNA-binding domains LexA/Signal peptidase 21
P-loop containing nucleoside triphosphate hydrolases "Winged helix" DNA-binding domain 22
C-terminal UvrC-binding domain of UvrB RuvA domain 2-like 22
FAD/NAD(P)-binding domain 4Fe-4S ferredoxins 21
Chemotaxis receptor methyltransferase CheR, N-terminal domain PYP-like sensor domain (PAS domain) 22
Phoshotransferase/anion transport protein Phosphohistidine domain 22
Coiled-coil domain of nucleotide exchange factor GrpE Head domain of nucleotide exchange factor GrpE 22
MurE/MurF N-terminal domain MurD-like peptide ligases, catalytic domain 21
Periplasmic binding protein-like II ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 22
P-loop containing nucleoside triphosphate hydrolases CBS-domain pair 21
Nitrite and sulphite reductase 4Fe-4S domain-like Nitrite and sulphite reductase 4Fe-4S domain-like 22
RuvA domain 2-like RuvA domain 2-like 22
Cobalamin (vitamin B12)-dependent enzymes Cobalamin (vitamin B12)-binding domain 21
CheW-like CheW-like 22
P-loop containing nucleoside triphosphate hydrolases C-terminal domain of alpha and beta subunits of F1 ATP synthase 21
Nucleotidylyl transferase Alpha-L RNA-binding motif 21
PGBD-like L,D-transpeptidase catalytic domain-like 21
FAD-linked reductases, C-terminal domain 4Fe-4S ferredoxins 21
P-loop containing nucleoside triphosphate hydrolases FtsH protease domain-like 22
(Trans)glycosidases Nucleotide-diphospho-sugar transferases 21
Type II DNA topoisomerase GyrA/ParC C-terminal domain-like 22
Ribosomal protein S5 domain 2-like Type II DNA topoisomerase 22
HMA, heavy metal-associated domain HAD-like 22
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase CheW-like 22
GAF domain-like GAF domain-like 22
Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex CoA-dependent acyltransferases 22
YrdC/RibB RibA-like 21
"Winged helix" DNA-binding domain "Winged helix" DNA-binding domain 22
Cytochrome c oxidase subunit II-like, transmembrane region Cupredoxins 22
PYP-like sensor domain (PAS domain) C-terminal effector domain of the bipartite response regulators 22
GAF domain-like HD-domain/PDEase-like 22
ClpP/crotonase NAD(P)-binding Rossmann-fold domains 22
Glutathione synthetase ATP-binding domain-like Single hybrid motif 21
Nucleotidyltransferase ACT-like 22
Rudiment single hybrid motif Single hybrid motif 21
Pectin lyase-like Pectin lyase-like 22
Translation proteins SH3-like domain Nucleic acid-binding proteins 22
Aspartate/glutamate racemase Aspartate/glutamate racemase 21
Translation proteins ThrRS/AlaRS common domain 22
PreATP-grasp domain Single hybrid motif 21
Aminoacid dehydrogenase-like, N-terminal domain Isocitrate/Isopropylmalate dehydrogenase-like 21
Aldolase 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain 22
CheC-like Surface presentation of antigens (SPOA) 21
FAD/NAD(P)-binding domain Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain 22
Bacterial muramidases Lysozyme-like 21
S-adenosyl-L-methionine-dependent methyltransferases Nucleotide-diphospho-sugar transferases 22
IlvD/EDD N-terminal domain-like LeuD/IlvD-like 21
Acetyl-CoA synthetase-like Acetyl-CoA synthetase-like 21
NagB/RpiA/CoA transferase-like alpha-helical ferredoxin 21
NAD(P)-binding Rossmann-fold domains Isocitrate/Isopropylmalate dehydrogenase-like 21
Carbon-nitrogen hydrolase Adenine nucleotide alpha hydrolases-like 22
PTS system IIB component-like PTS system IIB component-like 21
N-terminal nucleophile aminohydrolases (Ntn hydrolases) Adenine nucleotide alpha hydrolases-like 21
Nucleotide-binding domain FAD-linked reductases, C-terminal domain 22
NAD(P)-binding Rossmann-fold domains ACT-like 22
Penicillin binding protein dimerisation domain beta-lactamase/transpeptidase-like 21
PYP-like sensor domain (PAS domain) Ribonuclease H-like 22
CBS-domain pair Inosine monophosphate dehydrogenase (IMPDH) 11
Single hybrid motif Thiamin diphosphate-binding fold (THDP-binding) 11
2Fe-2S ferredoxin-like alpha-helical ferredoxin 11
Homocysteine S-methyltransferase Methionine synthase domain 11
Acetyl-CoA synthetase-like NAD(P)-binding Rossmann-fold domains 11
YebC-like PFL-like glycyl radical enzymes 11
Globin-like Nucleotide cyclase 11
Ribonuclease PH domain 2-like Nucleic acid-binding proteins 11
Cytidine deaminase-like Dihydrofolate reductase-like 11
LysM domain LysM domain 11
Single hybrid motif TK C-terminal domain-like 11
N-terminal domain of MutM-like DNA repair proteins Glucocorticoid receptor-like (DNA-binding domain) 11
N-terminal domain of bifunctional PutA protein ALDH-like 11
cAMP-binding domain-like cAMP-binding domain-like 11
Dihydropteroate synthetase-like Methionine synthase activation domain-like 11
Formylmethanofuran:tetrahydromethanopterin formyltransferase Formylmethanofuran:tetrahydromethanopterin formyltransferase 11
Tex N-terminal region-like Nucleic acid-binding proteins 11
Periplasmic binding protein-like I Sm-like ribonucleoproteins 11
Aldolase AFP III-like domain 11
5' to 3' exonuclease, C-terminal subdomain DNA/RNA polymerases 11
Sigma3 and sigma4 domains of RNA polymerase sigma factors NTF2-like 11
post-HMGL domain-like 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain 11
Ribonuclease PH domain 2-like Ribonuclease PH domain 2-like 11
NAD(P)-binding Rossmann-fold domains 1-deoxy-D-xylulose-5-phosphate reductoisomerase, C-terminal domain 11
Homodimeric domain of signal transducing histidine kinase Homodimeric domain of signal transducing histidine kinase 11
PPK N-terminal domain-like PHP14-like 11
Methylesterase CheB, C-terminal domain PYP-like sensor domain (PAS domain) 11
HMA, heavy metal-associated domain Metal cation-transporting ATPase, ATP-binding domain N 11
RuvA domain 2-like DNA helicase RuvA subunit, C-terminal domain 11
FMN-binding split barrel UbiD C-terminal domain-like 11
"Winged helix" DNA-binding domain Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain 11
P-loop containing nucleoside triphosphate hydrolases C-terminal UvrC-binding domain of UvrB 11
CBS-domain pair MgtE membrane domain-like 11
Tex N-terminal region-like Ribonuclease H-like 11
CarD-like TRCF domain-like 11
ISP domain Bet v1-like 11
Chemotaxis receptor methyltransferase CheR, N-terminal domain TPR-like 11
Pectin lyase-like beta-Roll 11
FAD/NAD(P)-binding domain Nitrite and sulphite reductase 4Fe-4S domain-like 11
Histidine-containing phosphotransfer domain, HPT domain Nucleotide cyclase 11
GAF domain-like Histidine-containing phosphotransfer domain, HPT domain 11
PIN domain-like DNA/RNA polymerases 11
PH0987 N-terminal domain-like Cyclophilin-like 11
Resolvase-like KorB DNA-binding domain-like 11
Methyl-accepting chemotaxis protein (MCP) signaling domain Homodimeric domain of signal transducing histidine kinase 11
Carbamate kinase-like PUA domain-like 11
Ribonuclease H-like DNA/RNA polymerases 11
Zinc beta-ribbon Prokaryotic SH3-related domain 11
GAF domain-like Phosphoenolpyruvate/pyruvate domain 11
Trimeric LpxA-like enzymes Trimeric LpxA-like enzymes 11
Sigma2 domain of RNA polymerase sigma factors NTF2-like 11
Thioredoxin-like Six-hairpin glycosidases 11
Nitrous oxide reductase, N-terminal domain Cupredoxins 11
FAD-binding/transporter-associated domain-like alpha-helical ferredoxin 11
P-loop containing nucleoside triphosphate hydrolases Acyl-CoA N-acyltransferases (Nat) 11
Ribonuclease H-like Nucleic acid-binding proteins 11
Integrin alpha N-terminal domain CalX-like 11
PHP domain-like AF1531-like 11
Nucleotide cyclase SMAD/FHA domain 11
NAD(P)-binding Rossmann-fold domains Glutamyl tRNA-reductase dimerization domain 11
P-loop containing nucleoside triphosphate hydrolases HRDC-like 11
Prokaryotic type KH domain (KH-domain type II) Ribosomal protein S3 C-terminal domain 11
Acetyl-CoA synthetase-like GroES-like 11
"Winged helix" DNA-binding domain S-adenosyl-L-methionine-dependent methyltransferases 11
RuBisCO, large subunit, small (N-terminal) domain RuBisCo, C-terminal domain 11
Homeodomain-like Probable bacterial effector-binding domain 11
Aldolase Sialidases 11
Creatinase/prolidase N-terminal domain Creatinase/aminopeptidase 11
cAMP-binding domain-like CBS-domain pair 11
Class II aaRS and biotin synthetases Translation proteins 11
Aconitase B, N-terminal domain Aconitase iron-sulfur domain 11
Carbamate kinase-like ACT-like 11
DnaJ/Hsp40 cysteine-rich domain HSP40/DnaJ peptide-binding domain 11
Periplasmic binding protein-like II Rhodanese/Cell cycle control phosphatase 11
DNA topoisomerase I domain DNA breaking-rejoining enzymes 11
Sensory domain-like CheY-like 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) SIS domain 11
Adenine nucleotide alpha hydrolases-like GMP synthetase C-terminal dimerisation domain 11
PRTase-like PRTase-like 11
PLP-dependent transferases Ornithine decarboxylase C-terminal domain 11
P-loop containing nucleoside triphosphate hydrolases Signal peptide-binding domain 11
Adenine nucleotide alpha hydrolases-like ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 11
TerB-like Chaperone J-domain 11
Actin-like ATPase domain Heat shock protein 70kD (HSP70), C-terminal subdomain 11
Cytochrome c oxidase subunit I-like Cytochrome c oxidase subunit III-like 11
Acyl-CoA N-acyltransferases (Nat) SCP-like 11
Ribonuclease H-like Restriction endonuclease-like 11
PUA domain-like alpha/beta knot 11
Aldolase post-HMGL domain-like 11
Zinc beta-ribbon DNA primase core 11
Homocysteine S-methyltransferase Methionine synthase activation domain-like 11
RNase III domain-like dsRNA-binding domain-like 11
Dihydropteroate synthetase-like Cobalamin (vitamin B12)-binding domain 11
TGS-like Class II aaRS and biotin synthetases 11
PreATP-grasp domain Methylglyoxal synthase-like 11
YjeF N-terminal domain-like Ribokinase-like 11
Class I glutamine amidotransferase-like Adenine nucleotide alpha hydrolases-like 11
P-loop containing nucleoside triphosphate hydrolases Pre-protein crosslinking domain of SecA 11
Methylglyoxal synthase-like Cytidine deaminase-like 11
TTHA1013/TTHA0281-like Ribbon-helix-helix 11
Methyl-accepting chemotaxis protein (MCP) signaling domain Methyl-accepting chemotaxis protein (MCP) signaling domain 11
Glutamyl tRNA-reductase catalytic, N-terminal domain Glutamyl tRNA-reductase dimerization domain 11
Ribosomal protein S5 domain 2-like GHMP Kinase, C-terminal domain 11
Rho N-terminal domain-like Nucleic acid-binding proteins 11
ACT-like ARM repeat 11
TPR-like Radical SAM enzymes 11
SufE/NifU Fe-S cluster assembly (FSCA) domain-like 11
Ribulose-phoshate binding barrel Nitrite and sulphite reductase 4Fe-4S domain-like 11
Translation proteins Initiation factor IF2/eIF5b, domain 3 11
Urease metallochaperone UreE, N-terminal domain Urease metallochaperone UreE, C-terminal domain 11
PYP-like sensor domain (PAS domain) Myosin rod fragments 11
Translation proteins PRC-barrel domain 11
Acetyl-CoA synthetase-like alpha/beta-Hydrolases 11
Phage tail proteins gp5 N-terminal domain-like 11
Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain ACT-like 11
C-terminal effector domain of the bipartite response regulators C-terminal effector domain of the bipartite response regulators 11
Molybdenum cofactor biosynthesis proteins Periplasmic binding protein-like II 11
DNA repair protein MutS, domain I DNA repair protein MutS, domain III 11
Cyclophilin-like Glycoside hydrolase/deacetylase 11
TPR-like C-terminal domain of transcriptional repressors 11
Galactose-binding domain-like Histidine-containing phosphotransfer domain, HPT domain 11
Nucleotidyltransferase substrate binding subunit/domain Poly A polymerase C-terminal region-like 11
FKBP-like FKBP-like 11
NusB-like S-adenosyl-L-methionine-dependent methyltransferases 11
beta-Galactosidase/glucuronidase domain beta-Galactosidase/glucuronidase domain 11
Leukotriene A4 hydrolase N-terminal domain Metalloproteases ("zincins"), catalytic domain 11
Adenine nucleotide alpha hydrolases-like Argininosuccinate synthetase, C-terminal domain 11
Class II aaRS and biotin synthetases C-terminal domain of transcriptional repressors 11
ACP-like Trimeric LpxA-like enzymes 11
Globin-like Cobalamin (vitamin B12)-binding domain 11
DnaK suppressor protein DksA, alpha-hairpin domain Glucocorticoid receptor-like (DNA-binding domain) 11
all-alpha NTP pyrophosphatases all-alpha NTP pyrophosphatases 11
ParB/Sulfiredoxin S-adenosyl-L-methionine-dependent methyltransferases 11
Ribosomal L11/L12e N-terminal domain Ribosomal protein L11, C-terminal domain 11
Acetyl-CoA synthetase-like Thioesterase/thiol ester dehydrase-isomerase 11
Methyl-accepting chemotaxis protein (MCP) signaling domain ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 11
Nqo5-like HydB/Nqo4-like 11
Cadherin-like CalX-like 11
MOP-like MOP-like 11
Phoshotransferase/anion transport protein Ribokinase-like 11
P-loop containing nucleoside triphosphate hydrolases RecA protein, C-terminal domain 11
P-loop containing nucleoside triphosphate hydrolases TrpR-like 11
FAD/NAD(P)-binding domain HI0933 insert domain-like 11
Nicotinic receptor ligand binding domain-like Neurotransmitter-gated ion-channel transmembrane pore 11
NAD(P)-binding Rossmann-fold domains Acyl-CoA N-acyltransferases (Nat) 11
Trigger factor ribosome-binding domain FKBP-like 11
N-terminal domain of bifunctional PutA protein FAD-linked oxidoreductase 11
Sensory domain-like GAF domain-like 11
UROD/MetE-like UROD/MetE-like 11
EAL domain-like CBS-domain pair 11
Methyl-accepting chemotaxis protein (MCP) signaling domain Hemerythrin-like 11
Actin-like ATPase domain Heat shock protein 70kD (HSP70), peptide-binding domain 11
S-adenosyl-L-methionine-dependent methyltransferases NAD(P)-binding Rossmann-fold domains 11
Voltage-gated potassium channels NAD(P)-binding Rossmann-fold domains 11
P-loop containing nucleoside triphosphate hydrolases ACT-like 11
FabD/lysophospholipase-like Probable ACP-binding domain of malonyl-CoA ACP transacylase 11
Dihydropteroate synthetase-like Methionine synthase domain 11
Aconitase B, N-terminal domain LeuD/IlvD-like 11
Glucocorticoid receptor-like (DNA-binding domain) P-loop containing nucleoside triphosphate hydrolases 11
FMN-binding split barrel 2Fe-2S ferredoxin-like 11
PUA domain-like S-adenosyl-L-methionine-dependent methyltransferases 11
ALDH-like Dehydroquinate synthase-like 11
HD-domain/PDEase-like Nucleotidyltransferase 11
"Winged helix" DNA-binding domain NagB/RpiA/CoA transferase-like 11
Radical SAM enzymes Nitrogenase accessory factor-like 11
alpha/beta-Hydrolases alpha/beta-Hydrolases 11
alpha/beta-Hydrolases Galactose-binding domain-like 11
Pre-protein crosslinking domain of SecA Helical scaffold and wing domains of SecA 11
Translation proteins Translation proteins 11
Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain 11
Methionine synthase domain Cobalamin (vitamin B12)-binding domain 11
Caspase-like C-type lectin-like 11
Domain of the SRP/SRP receptor G-proteins P-loop containing nucleoside triphosphate hydrolases 11
MFS general substrate transporter Acetyl-CoA synthetase-like 11
Methylesterase CheB, C-terminal domain S-adenosyl-L-methionine-dependent methyltransferases 11
Carbamoyl phosphate synthetase, large subunit connection domain Methylglyoxal synthase-like 11
FMN-binding split barrel Ferredoxin reductase-like, C-terminal NADP-linked domain 11
beta-lactamase/transpeptidase-like Penicillin-binding protein associated domain 11
TGS-like ThrRS/AlaRS common domain 11
R1 subunit of ribonucleotide reductase, N-terminal domain PFL-like glycyl radical enzymes 11
Tubulin nucleotide-binding domain-like Tubulin C-terminal domain-like 11
DNA-glycosylase Nudix 11
HAMP domain-like Histidine-containing phosphotransfer domain, HPT domain 11
Phosphoenolpyruvate/pyruvate domain P-loop containing nucleoside triphosphate hydrolases 11
GAF domain-like Phosphohistidine domain 11
N-terminal domain of MutM-like DNA repair proteins S13-like H2TH domain 11
P-loop containing nucleoside triphosphate hydrolases Prokaryotic type KH domain (KH-domain type II) 11
MoeA N-terminal region -like Periplasmic binding protein-like II 11
Heat shock protein 70kD (HSP70), peptide-binding domain Heat shock protein 70kD (HSP70), C-terminal subdomain 11
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase HSP90 C-terminal domain 11
Class I glutamine amidotransferase-like GMP synthetase C-terminal dimerisation domain 11
C-terminal effector domain of the bipartite response regulators "Winged helix" DNA-binding domain 11
Thioredoxin-like TPR-like 11
Transcription factor NusA, N-terminal domain Prokaryotic type KH domain (KH-domain type II) 11
Nucleic acid-binding proteins GAD domain-like 11
FAD/NAD(P)-binding domain Nitrite/Sulfite reductase N-terminal domain-like 11
DNA/RNA polymerases Lesion bypass DNA polymerase (Y-family), little finger domain 11
beta-lactamase/transpeptidase-like beta-lactamase/transpeptidase-like 11
Ribosomal protein L6 Ribosomal protein L6 11
YdfO-like YdfO-like 11
Nucleotidyltransferase TGS-like 11
Glutamyl tRNA-reductase catalytic, N-terminal domain NAD(P)-binding Rossmann-fold domains 11
Terpenoid cyclases/Protein prenyltransferases Terpenoid cyclases/Protein prenyltransferases 11
Homocysteine S-methyltransferase Cobalamin (vitamin B12)-binding domain 11
Obg GTP-binding protein N-terminal domain P-loop containing nucleoside triphosphate hydrolases 11
Phage tail proteins Phage fibre proteins 11
Nucleotidylyl transferase Riboflavin kinase-like 11
Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases tRNA-binding arm 11
"Winged helix" DNA-binding domain Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain 11
Thioredoxin-like Thioredoxin-like 11
FAD/NAD(P)-binding domain ISP domain 11
ThrRS/AlaRS common domain Class II aaRS ABD-related 11
Nucleotide-diphospho-sugar transferases RmlC-like cupins 11
Hsp33 domain HSP33 redox switch-like 11
N-utilization substance G protein NusG, N-terminal domain Translation proteins SH3-like domain 11
DNA repair protein MutS, domain II DNA repair protein MutS, domain III 11
CorA soluble domain-like Magnesium transport protein CorA, transmembrane region 11
Homo-oligomeric flavin-containing Cys decarboxylases, HFCD CoaB-like 11
Protein kinase-like (PK-like) E set domains 11
P-loop containing nucleoside triphosphate hydrolases CarD-like 11
Periplasmic binding protein-like II ACT-like 11
Succinyl-CoA synthetase domains Acyl-CoA N-acyltransferases (Nat) 11
HD-domain/PDEase-like ACT-like 11
C-terminal effector domain of the bipartite response regulators TPR-like 11
Class II aaRS and biotin synthetases GAD domain-like 11
Thioredoxin-like Nqo1C-terminal domain-like 11
Rho N-terminal domain-like P-loop containing nucleoside triphosphate hydrolases 11
6-phosphogluconate dehydrogenase C-terminal domain-like ClpP/crotonase 11
Glutathione synthetase ATP-binding domain-like Carbamoyl phosphate synthetase, large subunit connection domain 11
P-loop containing nucleoside triphosphate hydrolases Smc hinge domain 11
Bacterial fluorinating enzyme, N-terminal domain Bacterial fluorinating enzyme, C-terminal domain 11
Single hybrid motif CoA-dependent acyltransferases 11
Pyruvate-ferredoxin oxidoreductase, PFOR, domain III Thiamin diphosphate-binding fold (THDP-binding) 11
HD-domain/PDEase-like TGS-like 11
Ribosomal protein S5 domain 2-like Nucleic acid-binding proteins 11
Prokaryotic type KH domain (KH-domain type II) Prokaryotic type KH domain (KH-domain type II) 11
P-loop containing nucleoside triphosphate hydrolases Helical scaffold and wing domains of SecA 11
Histidine-containing phosphotransfer domain, HPT domain CheW-like 11
Eukaryotic type KH-domain (KH-domain type I) Nucleic acid-binding proteins 11
Pyruvate-ferredoxin oxidoreductase, PFOR, domain III TK C-terminal domain-like 11
MgtE N-terminal domain-like CBS-domain pair 11
Ribonuclease H-like RuvA domain 2-like 11
Transcription factor NusA, N-terminal domain Rad51 N-terminal domain-like 11
UDP-Glycosyltransferase/glycogen phosphorylase Nucleotide-binding domain 11
Galactose-binding domain-like ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 11
2Fe-2S ferredoxin-like Nucleotide cyclase 11
RuvA domain 2-like P-loop containing nucleoside triphosphate hydrolases 11
Trypsin-like serine proteases beta-Roll 11
Sensory domain-like Nucleotide cyclase 11
GroES-like GroES-like 11
4Fe-4S ferredoxins ADC-like 11
ClpP/crotonase GroES-like 11
ACT-like Formyltransferase 11
PurM C-terminal domain-like PurM C-terminal domain-like 11
HAMP domain-like EAL domain-like 11
CO dehydrogenase ISP C-domain like CO dehydrogenase flavoprotein C-terminal domain-like 11
Galactose-binding domain-like Homodimeric domain of signal transducing histidine kinase 11
Phase 1 flagellin Phase 1 flagellin 11
Radical SAM enzymes RuvA domain 2-like 11
CheY-like PP2C-like 11
HPr-like Ribokinase-like 11
FAD-linked oxidases, C-terminal domain alpha-helical ferredoxin 11
Phosphoenolpyruvate/pyruvate domain Homeodomain-like 11
Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase RuBisCo, C-terminal domain 11
GAF domain-like Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain 11
Protein kinase-like (PK-like) P-loop containing nucleoside triphosphate hydrolases 11
Molybdenum cofactor biosynthesis proteins Nucleotide-diphospho-sugar transferases 11
Acetyl-CoA synthetase-like Multidrug resistance efflux transporter EmrE 11
Fumarate reductase respiratory complex transmembrane subunits Nucleotide cyclase 11
TolB, N-terminal domain Tricorn protease N-terminal domain 11
FAD-binding/transporter-associated domain-like Uridine diphospho-N-Acetylenolpyruvylglucosamine reductase, MurB, C-terminal domain 11
Isochorismatase-like hydrolases ACP-like 11
S-adenosyl-L-methionine-dependent methyltransferases Putative methyltransferase TM0872, insert domain 11
Ribosomal protein S5 domain 2-like HSP90 C-terminal domain 11
Ribonuclease H-like HRDC-like 11
Periplasmic binding protein-like II Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain 11
CheW-like CheY-like 11
Homeodomain-like Methylated DNA-protein cysteine methyltransferase, C-terminal domain 11
Fe-S cluster assembly (FSCA) domain-like P-loop containing nucleoside triphosphate hydrolases 11
Phoshotransferase/anion transport protein Phosphoenolpyruvate/pyruvate domain 11
Homocysteine S-methyltransferase Dihydropteroate synthetase-like 11
Zn-dependent exopeptidases Trypsin-like serine proteases 11
Prokaryotic type I DNA topoisomerase Zinc beta-ribbon 11
P-loop containing nucleoside triphosphate hydrolases TGS-like 11
Glutathione synthetase ATP-binding domain-like Methylglyoxal synthase-like 11
S-adenosyl-L-methionine-dependent methyltransferases Myosin rod fragments 11
lambda integrase-like, N-terminal domain DNA breaking-rejoining enzymes 11
Acetyl-CoA synthetase-like Trimeric LpxA-like enzymes 11
Methionine synthase domain Methionine synthase activation domain-like 11
CBS-domain pair ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 11
NAD(P)-binding Rossmann-fold domains TrkA C-terminal domain-like 11
"Winged helix" DNA-binding domain MOP-like 11
Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 1-deoxy-D-xylulose-5-phosphate reductoisomerase, C-terminal domain 11
TGS-like ACT-like 11
ADC synthase Class I glutamine amidotransferase-like 11
Insert subdomain of RNA polymerase alpha subunit C-terminal domain of RNA polymerase alpha subunit 11
Eukaryotic type KH-domain (KH-domain type I) P-loop containing nucleoside triphosphate hydrolases 11
Nucleic acid-binding proteins S-adenosyl-L-methionine-dependent methyltransferases 11
"Winged helix" DNA-binding domain Acyl-CoA N-acyltransferases (Nat) 11
Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain Ribokinase-like 11
Sigma3 and sigma4 domains of RNA polymerase sigma factors Sigma3 and sigma4 domains of RNA polymerase sigma factors 11
Glycerol-3-phosphate (1)-acyltransferase Acetyl-CoA synthetase-like 11
Galactose-binding domain-like beta-Galactosidase/glucuronidase domain 11
FMN-binding split barrel Riboflavin synthase domain-like 11
ACP-like alpha/beta-Hydrolases 11
Cryptochrome/photolyase, N-terminal domain Cryptochrome/photolyase FAD-binding domain 11
Thioredoxin-like FAD/NAD(P)-binding domain 11
2Fe-2S ferredoxin-like FAD-binding/transporter-associated domain-like 11
TPR-like P-loop containing nucleoside triphosphate hydrolases 11
Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase RuBisCO, large subunit, small (N-terminal) domain 11
Poly A polymerase C-terminal region-like ACT-like 11
cAMP-binding domain-like SMAD/FHA domain 11
Aminopeptidase/glucanase lid domain Zn-dependent exopeptidases 11
Formyltransferase FMT C-terminal domain-like 11
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase DNA mismatch repair protein MutL 11
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 11
Trypsin-like serine proteases DNase I-like 11
DNA repair protein MutS, domain I P-loop containing nucleoside triphosphate hydrolases 11
Transcription factor NusA, N-terminal domain Nucleic acid-binding proteins 11
Galactose-binding domain-like CheY-like 11
PurM N-terminal domain-like PurM N-terminal domain-like 11
2-methylcitrate dehydratase PrpD Phosphoenolpyruvate/pyruvate domain 11
Methylesterase CheB, C-terminal domain Chemotaxis receptor methyltransferase CheR, N-terminal domain 11
PRC-barrel domain PRC-barrel domain 11
5' to 3' exonuclease, C-terminal subdomain Ribonuclease H-like 11
PPK N-terminal domain-like Phospholipase D/nuclease 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) PRTase-like 11
"Winged helix" DNA-binding domain Acetyl-CoA synthetase-like 11
Succinyl-CoA synthetase domains Succinyl-CoA synthetase domains 11
Nucleotidyltransferase substrate binding subunit/domain ACT-like 11
Single hybrid motif Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex 11
Nucleic acid-binding proteins Rad51 N-terminal domain-like 11
Nucleic acid-binding proteins ArfGap/RecO-like zinc finger 11
Sensory domain-like PilZ domain-like 11
PreATP-grasp domain Carbamoyl phosphate synthetase, large subunit connection domain 11
PLP-dependent transferases PLP-dependent transferases 11
(Trans)glycosidases CalX-like 11
YlxR-like L30e-like 11
DNA repair protein MutS, domain II P-loop containing nucleoside triphosphate hydrolases 11
DNA ligase/mRNA capping enzyme, catalytic domain RuvA domain 2-like 11
Nucleic acid-binding proteins DNA helicase RuvA subunit, C-terminal domain 11
PEP carboxykinase N-terminal domain PEP carboxykinase-like 11
Nucleic acid-binding proteins Prokaryotic type KH domain (KH-domain type II) 11
S13-like H2TH domain Glucocorticoid receptor-like (DNA-binding domain) 11
P-loop containing nucleoside triphosphate hydrolases Initiation factor IF2/eIF5b, domain 3 11
CBS-domain pair Nucleotide cyclase 11
PYP-like sensor domain (PAS domain) PilZ domain-like 11
Nucleic acid-binding proteins BRCT domain 11
Ribosomal protein L7/12, oligomerisation (N-terminal) domain ClpS-like 11
Homeodomain-like Methylated DNA-protein cysteine methyltransferase domain 11
P-loop containing nucleoside triphosphate hydrolases Restriction endonuclease-like 11
Riboflavin synthase domain-like Riboflavin synthase domain-like 11
Nucleotide-diphospho-sugar transferases IpsF-like 11
"Winged helix" DNA-binding domain Actin-like ATPase domain 11
2Fe-2S ferredoxin-like ADC-like 11
CO dehydrogenase ISP C-domain like FAD-binding/transporter-associated domain-like 11
Formate/glycerate dehydrogenase catalytic domain-like ACT-like 11
MoeA C-terminal domain-like Periplasmic binding protein-like II 11
Heme-dependent peroxidases beta-Roll 11
HD-domain/PDEase-like Hemerythrin-like 11
Macro domain-like Zn-dependent exopeptidases 11
DNA repair protein MutS, domain III P-loop containing nucleoside triphosphate hydrolases 11
Ribonuclease H-like BRCT domain 11
4'-phosphopantetheinyl transferase 4'-phosphopantetheinyl transferase 11
Integrin alpha N-terminal domain Cadherin-like 11
beta-Roll Cadherin-like 11
Tetrapyrrole methylase S-adenosyl-L-methionine-dependent methyltransferases 11
Fumarate reductase respiratory complex transmembrane subunits 2Fe-2S ferredoxin-like 11
TGS-like Class II aaRS ABD-related 11
Mechanosensitive channel protein MscS (YggB), C-terminal domain cAMP-binding domain-like 11
Trigger factor ribosome-binding domain Triger factor/SurA peptide-binding domain-like 11
YhbC-like, N-terminal domain YhbC-like, C-terminal domain 11
PIN domain-like Ribonuclease H-like 11
Single hybrid motif alpha/beta-Hydrolases 11
Adenine nucleotide alpha hydrolases-like GAF domain-like 11
Glycosyl hydrolase domain Protein kinase-like (PK-like) 11
Pectin lyase-like Autotransporter 11
Molybdenum cofactor-binding domain Molybdenum cofactor-binding domain 11
Sm-like ribonucleoproteins cAMP-binding domain-like 11
GST C-terminal domain-like RmlC-like cupins 11
Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) Translation proteins 11
L9 N-domain-like Ribosomal protein L9 C-domain 11
FAD/NAD(P)-binding domain Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain 11
Lysozyme-like PGBD-like 11
Rad51 N-terminal domain-like Rad51 N-terminal domain-like 11
Ribonuclease PH domain 2-like Eukaryotic type KH-domain (KH-domain type I) 11
Nudix "Winged helix" DNA-binding domain 11
TrmE connector domain P-loop containing nucleoside triphosphate hydrolases 11
Multiheme cytochromes Cytochrome c 11
MFS general substrate transporter Glycerol-3-phosphate (1)-acyltransferase 11
Thioredoxin-like Nqo1 middle domain-like 11
Glutathione synthetase ATP-binding domain-like Glutathione synthetase ATP-binding domain-like 11
CBS-domain pair Homodimeric domain of signal transducing histidine kinase 11
Thioredoxin-like RmlC-like cupins 11
RuvA domain 2-like BRCT domain 11
Cobalamin (vitamin B12)-binding domain Methionine synthase activation domain-like 11
Nucleotidylyl transferase tRNA-binding arm 11
2Fe-2S ferredoxin-like CO dehydrogenase flavoprotein C-terminal domain-like 11
S-adenosylmethionine synthetase S-adenosylmethionine synthetase 11
Carbamoyl phosphate synthetase, small subunit N-terminal domain Class I glutamine amidotransferase-like 11
NAD(P)-binding Rossmann-fold domains Glutathione synthetase ATP-binding domain-like 11
Ribosomal protein S5 domain 2-like DNA mismatch repair protein MutL 11
OMPA-like OmpA-like 11
Class II aaRS and biotin synthetases Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) 11
gp5 N-terminal domain-like Phage fibre proteins 11
Chemotaxis receptor methyltransferase CheR, N-terminal domain Myosin rod fragments 11
Insert subdomain of RNA polymerase alpha subunit RBP11-like subunits of RNA polymerase 11
Chaperone J-domain DnaJ/Hsp40 cysteine-rich domain 11
Acetyl-CoA synthetase-like ClpP/crotonase 11
Hemerythrin-like Hemerythrin-like 11
Prokaryotic type KH domain (KH-domain type II) Rad51 N-terminal domain-like 11
Tex N-terminal region-like RuvA domain 2-like 11
HCP-like HCP-like 11
E set domains alpha/beta-Hydrolases 11
MgtE N-terminal domain-like MgtE membrane domain-like 11
Nitrite/Sulfite reductase N-terminal domain-like Nitrite/Sulfite reductase N-terminal domain-like 11
Ribosome binding protein Y (YfiA homologue) Nucleic acid-binding proteins 11
Folate-binding domain Aminomethyltransferase beta-barrel domain 11
ValRS/IleRS/LeuRS editing domain tRNA-binding arm 11
Nucleotidyltransferase Nucleotidyltransferase substrate binding subunit/domain 11
EreA/ChaN-like PDZ domain-like 11
Adenine nucleotide alpha hydrolases-like Homodimeric domain of signal transducing histidine kinase 11
NagB/RpiA/CoA transferase-like NagB/RpiA/CoA transferase-like 11
Methyl-accepting chemotaxis protein (MCP) signaling domain CheY-like 11
PIN domain-like 5' to 3' exonuclease, C-terminal subdomain 11
Sensory domain-like PYP-like sensor domain (PAS domain) 11
Phage tail proteins Phage tail proteins 11
DNA repair protein MutS, domain I DNA repair protein MutS, domain II 11
Hypothetical protein SAV1430 Fe-S cluster assembly (FSCA) domain-like 11
Acylphosphatase/BLUF domain-like YrdC/RibB 11
PreATP-grasp domain PreATP-grasp domain 11
Thioredoxin-like Nqo1 FMN-binding domain-like 11
N-acetylmuramoyl-L-alanine amidase-like PGBD-like 11
Methyl-accepting chemotaxis protein (MCP) signaling domain GAF domain-like 11
"Winged helix" DNA-binding domain LexA/Signal peptidase 11
Galactose-binding domain-like (Trans)glycosidases 11
DNA ligase/mRNA capping enzyme, catalytic domain BRCT domain 11
Ribosomal protein S5 domain 2-like Eukaryotic type KH-domain (KH-domain type I) 11
HRDC-like HRDC-like 11
Zn-dependent exopeptidases DNase I-like 11
P-loop containing nucleoside triphosphate hydrolases TRCF domain-like 11
YajQ-like YajQ-like 11
UDP-Glycosyltransferase/glycogen phosphorylase FAD-linked reductases, C-terminal domain 11
Phosphohistidine domain Ribokinase-like 11
RBP11-like subunits of RNA polymerase C-terminal domain of RNA polymerase alpha subunit 11
2,3-Bisphosphoglycerate-independent phosphoglycerate mutase, substrate-binding domain Alkaline phosphatase-like 11
PHP14-like Phospholipase D/nuclease 11
Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) ThrRS/AlaRS common domain 11
Glutathione synthetase ATP-binding domain-like Phosphoenolpyruvate/pyruvate domain 11
Alpha-L RNA-binding motif S-adenosyl-L-methionine-dependent methyltransferases 11
Glutamine synthetase/guanido kinase GatB/YqeY motif 11
E set domains E set domains 11
Nucleic acid-binding proteins Class II aaRS and biotin synthetases 11
6-phosphogluconate dehydrogenase C-terminal domain-like 6-phosphogluconate dehydrogenase C-terminal domain-like 11
FAD-linked oxidoreductase ALDH-like 11
HAMP domain-like MFS general substrate transporter 11
HPr-like Phosphoenolpyruvate/pyruvate domain 11

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