SUPERFAMILY 1.75 HMM library and genome assignments server

Domain combination pairs in Magnetospirillum magneticum AMB-1

All pairs of domain combinations at the superfamily level are listed here.
The identification of domain pairs does not account for the possibility of non-contiguous domains. Inserted, or interlaced, domains are seen as having a simple pair ordering.

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Adjacent domain pairs graph

Graph of adjacent domain pairs.


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Domain combination pairs

771 domain combination pairs.
Click on a column heading to sort that column, or the 'View' button to see domain architetures for that domain pair combination.

Superfamily (N) Superfamily (C) Number of occurrances Number unique
Homodimeric domain of signal transducing histidine kinase ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 9349
PYP-like sensor domain (PAS domain) ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 6035
PYP-like sensor domain (PAS domain) Homodimeric domain of signal transducing histidine kinase 5632
PYP-like sensor domain (PAS domain) PYP-like sensor domain (PAS domain) 3427
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase CheY-like 3129
CheY-like Homodimeric domain of signal transducing histidine kinase 3129
P-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases 2611
PYP-like sensor domain (PAS domain) Nucleotide cyclase 2319
CheY-like C-terminal effector domain of the bipartite response regulators 213
CheY-like PYP-like sensor domain (PAS domain) 2121
Histidine-containing phosphotransfer domain, HPT domain CheY-like 1714
PYP-like sensor domain (PAS domain) EAL domain-like 1714
Nucleotide cyclase EAL domain-like 1714
cAMP-binding domain-like "Winged helix" DNA-binding domain 162
HAMP domain-like ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 1512
CheY-like CheY-like 1514
Histidine-containing phosphotransfer domain, HPT domain ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 1412
Actin-like ATPase domain Actin-like ATPase domain 145
Histidine-containing phosphotransfer domain, HPT domain Homodimeric domain of signal transducing histidine kinase 1311
HAMP domain-like PYP-like sensor domain (PAS domain) 1311
GAF domain-like ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 1212
TPR-like UDP-Glycosyltransferase/glycogen phosphorylase 123
GAF domain-like PYP-like sensor domain (PAS domain) 1212
NAD(P)-binding Rossmann-fold domains Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 125
HAMP domain-like Homodimeric domain of signal transducing histidine kinase 1210
NAD(P)-binding Rossmann-fold domains 6-phosphogluconate dehydrogenase C-terminal domain-like 124
"Winged helix" DNA-binding domain Periplasmic binding protein-like II 111
ABC transporter transmembrane region P-loop containing nucleoside triphosphate hydrolases 102
Thiamin diphosphate-binding fold (THDP-binding) TK C-terminal domain-like 107
Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) 106
Formate dehydrogenase/DMSO reductase, domains 1-3 ADC-like 94
GAF domain-like Homodimeric domain of signal transducing histidine kinase 99
Acyl-CoA dehydrogenase NM domain-like Acyl-CoA dehydrogenase C-terminal domain-like 94
CheY-like HD-domain/PDEase-like 92
Multidrug resistance efflux transporter EmrE Multidrug resistance efflux transporter EmrE 82
Cytochrome c Cytochrome c 83
PreATP-grasp domain Glutathione synthetase ATP-binding domain-like 85
P-loop containing nucleoside triphosphate hydrolases Translation proteins 86
GroES-like NAD(P)-binding Rossmann-fold domains 82
CheY-like Nucleotide cyclase 88
Sigma2 domain of RNA polymerase sigma factors Sigma3 and sigma4 domains of RNA polymerase sigma factors 84
TPR-like TPR-like 87
Thioredoxin-like GST C-terminal domain-like 72
P-loop containing nucleoside triphosphate hydrolases Homeodomain-like 72
Multidrug efflux transporter AcrB transmembrane domain Multidrug efflux transporter AcrB transmembrane domain 74
TPR-like S-adenosyl-L-methionine-dependent methyltransferases 74
Chemotaxis receptor methyltransferase CheR, N-terminal domain S-adenosyl-L-methionine-dependent methyltransferases 75
PYP-like sensor domain (PAS domain) Histidine-containing phosphotransfer domain, HPT domain 77
Formate/glycerate dehydrogenase catalytic domain-like NAD(P)-binding Rossmann-fold domains 63
Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains Multidrug efflux transporter AcrB transmembrane domain 63
Nucleotidylyl transferase Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 65
Calcium ATPase, transduction domain A HAD-like 65
P-loop containing nucleoside triphosphate hydrolases Ribosomal protein S5 domain 2-like 65
Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains 63
N-terminal nucleophile aminohydrolases (Ntn hydrolases) Adenine nucleotide alpha hydrolases-like 61
Calcium ATPase, transduction domain A Calcium ATPase, transmembrane domain M 65
FAD/NAD(P)-binding domain FAD/NAD(P)-binding domain 65
CheY-like P-loop containing nucleoside triphosphate hydrolases 61
MurD-like peptide ligases, catalytic domain MurD-like peptide ligases, peptide-binding domain 63
GAF domain-like CheY-like 66
beta-Roll beta-Roll 66
HAD-like Calcium ATPase, transmembrane domain M 65
Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains 63
HAMP domain-like CheY-like 66
Homeodomain-like Tetracyclin repressor-like, C-terminal domain 62
CheY-like Homeodomain-like 61
Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains Multidrug efflux transporter AcrB transmembrane domain 63
Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains 63
Resolvase-like Homeodomain-like 51
Sensory domain-like ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 55
Cation efflux protein transmembrane domain-like Cation efflux protein cytoplasmic domain-like 51
Aminoacid dehydrogenase-like, N-terminal domain NAD(P)-binding Rossmann-fold domains 53
"Winged helix" DNA-binding domain GntR ligand-binding domain-like 51
Sensory domain-like Homodimeric domain of signal transducing histidine kinase 55
PreATP-grasp domain Rudiment single hybrid motif 53
Glutathione synthetase ATP-binding domain-like Rudiment single hybrid motif 53
Thiolase-like Thiolase-like 51
Trypsin-like serine proteases PDZ domain-like 54
CheY-like EAL domain-like 54
HAMP domain-like GAF domain-like 55
P-loop containing nucleoside triphosphate hydrolases EF-G C-terminal domain-like 43
Methyl-accepting chemotaxis protein (MCP) signaling domain Hemerythrin-like 41
Protein kinase-like (PK-like) P-loop containing nucleoside triphosphate hydrolases 44
NAD(P)-binding Rossmann-fold domains Succinyl-CoA synthetase domains 43
Nitrite/Sulfite reductase N-terminal domain-like Nitrite and sulphite reductase 4Fe-4S domain-like 43
Nucleic acid-binding proteins Nucleic acid-binding proteins 44
Adenine nucleotide alpha hydrolases-like Adenine nucleotide alpha hydrolases-like 41
PDZ domain-like PDZ domain-like 43
2Fe-2S ferredoxin-like CO dehydrogenase ISP C-domain like 42
ClpP/crotonase ClpP/crotonase 42
ACT-like ACT-like 43
P-loop containing nucleoside triphosphate hydrolases GAF domain-like 44
FAD/NAD(P)-binding domain FAD/NAD-linked reductases, dimerisation (C-terminal) domain 42
Sensory domain-like Methyl-accepting chemotaxis protein (MCP) signaling domain 42
PLP-binding barrel Alanine racemase C-terminal domain-like 42
EF-G C-terminal domain-like EF-G C-terminal domain-like 43
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase Ribosomal protein S5 domain 2-like 44
Triger factor/SurA peptide-binding domain-like FKBP-like 43
FAD/NAD(P)-binding domain Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain 33
Thiamin diphosphate-binding fold (THDP-binding) 4Fe-4S ferredoxins 33
Nqo1 FMN-binding domain-like Nqo1C-terminal domain-like 32
ValRS/IleRS/LeuRS editing domain Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 33
P-loop containing nucleoside triphosphate hydrolases FtsH protease domain-like 31
Lysozyme-like beta-lactamase/transpeptidase-like 33
Sensory domain-like PYP-like sensor domain (PAS domain) 33
Translation proteins EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 32
P-loop containing nucleoside triphosphate hydrolases EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 32
Translation proteins EF-G C-terminal domain-like 32
PreATP-grasp domain Single hybrid motif 32
cAMP-binding domain-like cAMP-binding domain-like 32
Nucleotidylyl transferase An anticodon-binding domain of class I aminoacyl-tRNA synthetases 31
CheY-like Methylesterase CheB, C-terminal domain 32
GAF domain-like HD-domain/PDEase-like 33
Glutathione synthetase ATP-binding domain-like Succinyl-CoA synthetase domains 32
Protein kinase-like (PK-like) ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 33
Class II aaRS and biotin synthetases Class II aaRS ABD-related 33
Phosphohistidine domain Phosphoenolpyruvate/pyruvate domain 33
HAMP domain-like Histidine-containing phosphotransfer domain, HPT domain 33
MurCD N-terminal domain MurD-like peptide ligases, peptide-binding domain 31
ParB/Sulfiredoxin KorB DNA-binding domain-like 31
Methylesterase CheB, C-terminal domain S-adenosyl-L-methionine-dependent methyltransferases 33
Nqo1 middle domain-like Nqo1C-terminal domain-like 32
FAD-binding/transporter-associated domain-like CO dehydrogenase flavoprotein C-terminal domain-like 31
FAD/NAD(P)-binding domain FAD-linked reductases, C-terminal domain 33
NAD(P)-binding Rossmann-fold domains NAD(P)-binding Rossmann-fold domains 33
FAD-binding/transporter-associated domain-like FAD-linked oxidases, C-terminal domain 33
Nqo1 FMN-binding domain-like Nqo1 middle domain-like 32
CorA soluble domain-like Magnesium transport protein CorA, transmembrane region 32
Rudiment single hybrid motif Single hybrid motif 32
Cadherin-like Cadherin-like 33
Metallo-hydrolase/oxidoreductase cAMP-binding domain-like 32
Riboflavin synthase domain-like Ferredoxin reductase-like, C-terminal NADP-linked domain 33
Trypsin-like serine proteases Multiheme cytochromes 33
Alpha-L RNA-binding motif Pseudouridine synthase 32
Thiamin diphosphate-binding fold (THDP-binding) Pyruvate-ferredoxin oxidoreductase, PFOR, domain III 33
Glutathione synthetase ATP-binding domain-like Single hybrid motif 32
HMA, heavy metal-associated domain Calcium ATPase, transmembrane domain M 33
GAF domain-like Histidine-containing phosphotransfer domain, HPT domain 33
2Fe-2S ferredoxin-like 4Fe-4S ferredoxins 33
Methylesterase CheB, C-terminal domain Chemotaxis receptor methyltransferase CheR, N-terminal domain 33
MurCD N-terminal domain MurD-like peptide ligases, catalytic domain 31
Phosphoglucomutase, first 3 domains Phosphoglucomutase, C-terminal domain 31
Succinyl-CoA synthetase domains Succinyl-CoA synthetase domains 32
Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like 32
Aldolase AFP III-like domain 32
P-loop containing nucleoside triphosphate hydrolases post-AAA+ oligomerization domain-like 32
CO dehydrogenase molybdoprotein N-domain-like Molybdenum cofactor-binding domain 32
NAD(P)-binding Rossmann-fold domains Glutathione synthetase ATP-binding domain-like 32
Protein kinase-like (PK-like) GAF domain-like 33
HMA, heavy metal-associated domain HAD-like 33
Phosphoglucomutase, first 3 domains Phosphoglucomutase, first 3 domains 31
P-loop containing nucleoside triphosphate hydrolases Class I glutamine amidotransferase-like 31
LuxS/MPP-like metallohydrolase LuxS/MPP-like metallohydrolase 32
Composite domain of metallo-dependent hydrolases Metallo-dependent hydrolases 32
Multiheme cytochromes PDZ domain-like 33
HD-domain/PDEase-like HD-domain/PDEase-like 33
PurM N-terminal domain-like PurM C-terminal domain-like 32
Nucleic acid-binding proteins RuvA domain 2-like 33
CBS-domain pair FAD-binding/transporter-associated domain-like 31
HCP-like HCP-like 33
Cytochrome c C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase 31
P-loop containing nucleoside triphosphate hydrolases ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 33
Aldolase 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain 32
TK C-terminal domain-like Pyruvate-ferredoxin oxidoreductase, PFOR, domain III 33
Adenine nucleotide alpha hydrolases-like DHS-like NAD/FAD-binding domain 31
Thiamin diphosphate-binding fold (THDP-binding) DHS-like NAD/FAD-binding domain 31
ValRS/IleRS/LeuRS editing domain Nucleotidylyl transferase 33
HMA, heavy metal-associated domain Calcium ATPase, transduction domain A 33
NAD(P)-binding Rossmann-fold domains ACT-like 22
Chaperone J-domain HSP40/DnaJ peptide-binding domain 22
4Fe-4S ferredoxins Formate dehydrogenase/DMSO reductase, domains 1-3 22
YrdC/RibB RibA-like 21
Tryptophan synthase beta subunit-like PLP-dependent enzymes CBS-domain pair 21
Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain Phosphoenolpyruvate/pyruvate domain 22
Aconitase iron-sulfur domain LeuD/IlvD-like 22
Methylesterase CheB, C-terminal domain PYP-like sensor domain (PAS domain) 22
P-loop containing nucleoside triphosphate hydrolases C-terminal domain of alpha and beta subunits of F1 ATP synthase 21
Thioredoxin-like Nqo1C-terminal domain-like 21
Single hybrid motif Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex 21
Double Clp-N motif P-loop containing nucleoside triphosphate hydrolases 21
Homeodomain-like Homeodomain-like 21
Homeodomain-like Ribonuclease H-like 22
cAMP-binding domain-like Hemerythrin-like 21
E set domains (Trans)glycosidases 22
Nicotinate/Quinolinate PRTase N-terminal domain-like Nicotinate/Quinolinate PRTase C-terminal domain-like 21
Chemotaxis receptor methyltransferase CheR, N-terminal domain TPR-like 21
Glutathione synthetase ATP-binding domain-like Acyl-CoA N-acyltransferases (Nat) 21
Molybdenum cofactor-binding domain Molybdenum cofactor-binding domain 21
TPR-like Trypsin-like serine proteases 21
N-terminal domain of alpha and beta subunits of F1 ATP synthase P-loop containing nucleoside triphosphate hydrolases 21
Formyltransferase FMT C-terminal domain-like 22
Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain 21
Zinc beta-ribbon DNA primase core 21
NTF2-like Sec-C motif 21
Transmembrane di-heme cytochromes Cytochrome c 22
(Trans)glycosidases Glycosyl hydrolase domain 22
ThrRS/AlaRS common domain Class II aaRS and biotin synthetases 22
Phosphoenolpyruvate/pyruvate domain PK C-terminal domain-like 21
Tubulin nucleotide-binding domain-like Tubulin C-terminal domain-like 22
Succinyl-CoA synthetase domains Acyl-CoA N-acyltransferases (Nat) 21
Nucleotide-diphospho-sugar transferases UDP-Glycosyltransferase/glycogen phosphorylase 22
P-loop containing nucleoside triphosphate hydrolases MOP-like 21
Globin-like Methyl-accepting chemotaxis protein (MCP) signaling domain 22
HAMP domain-like Nucleotide cyclase 22
HCP-like Trypsin-like serine proteases 22
Nucleic acid-binding proteins Class II aaRS and biotin synthetases 22
S-adenosyl-L-methionine-dependent methyltransferases PYP-like sensor domain (PAS domain) 22
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase Type II DNA topoisomerase 22
2Fe-2S ferredoxin-like Formate dehydrogenase/DMSO reductase, domains 1-3 22
Nitrite/Sulfite reductase N-terminal domain-like 4Fe-4S ferredoxins 21
Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain Phosphohistidine domain 22
Molybdenum cofactor biosynthesis proteins MoeA C-terminal domain-like 21
Aspartate/glutamate racemase Aspartate/glutamate racemase 21
Histidine-containing phosphotransfer domain, HPT domain Nucleotide cyclase 22
SpoIIaa-like cAMP-binding domain-like 21
FabD/lysophospholipase-like Probable ACP-binding domain of malonyl-CoA ACP transacylase 22
Sensory domain-like Nucleotide cyclase 22
MoeA N-terminal region -like Molybdenum cofactor biosynthesis proteins 21
Aminoacid dehydrogenase-like, N-terminal domain Isocitrate/Isopropylmalate dehydrogenase-like 21
MoeA N-terminal region -like MoeA C-terminal domain-like 21
Chemotaxis receptor methyltransferase CheR, N-terminal domain PYP-like sensor domain (PAS domain) 22
Heat shock protein 70kD (HSP70), peptide-binding domain Heat shock protein 70kD (HSP70), C-terminal subdomain 22
"Winged helix" DNA-binding domain GAF domain-like 21
Flagellar hook protein flgE Flagellar hook protein flgE 21
N-utilization substance G protein NusG, N-terminal domain Translation proteins SH3-like domain 21
Homodimeric domain of signal transducing histidine kinase CheW-like 22
NAD(P)-binding Rossmann-fold domains LDH C-terminal domain-like 21
CheW-like CheY-like 22
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase CheW-like 22
GreA transcript cleavage protein, N-terminal domain FKBP-like 21
Aldolase post-HMGL domain-like 22
Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain 22
Translation proteins Ribosomal protein S5 domain 2-like 21
NAD(P)-binding Rossmann-fold domains UDP-glucose/GDP-mannose dehydrogenase C-terminal domain 21
Ribokinase-like Nucleotidylyl transferase 22
Nucleotidyltransferase Nucleotidyltransferase substrate binding subunit/domain 22
ParB/Sulfiredoxin S-adenosyl-L-methionine-dependent methyltransferases 21
Diaminopimelate epimerase-like Diaminopimelate epimerase-like 21
Thioredoxin-like Nqo1 middle domain-like 21
DNA-binding domain DNA breaking-rejoining enzymes 21
Single hybrid motif CoA-dependent acyltransferases 21
NAD(P)-binding Rossmann-fold domains Acyl-CoA N-acyltransferases (Nat) 21
Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex CoA-dependent acyltransferases 21
Ribosomal protein S5 domain 2-like Ribonuclease PH domain 2-like 22
Hemerythrin-like CheY-like 21
Type II DNA topoisomerase GyrA/ParC C-terminal domain-like 22
Translation proteins SH3-like domain Nucleic acid-binding proteins 22
Bacterial muramidases Lysozyme-like 21
Nucleotidyltransferase ACT-like 22
Metallo-hydrolase/oxidoreductase Hemerythrin-like 21
LysM domain LysM domain 22
Macro domain-like Zn-dependent exopeptidases 22
Nucleotidyltransferase Poly A polymerase C-terminal region-like 22
Ribosomal protein S5 domain 2-like GHMP Kinase, C-terminal domain 21
FAD/NAD(P)-binding domain Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain 22
Nucleic acid-binding proteins P-loop containing nucleoside triphosphate hydrolases 22
EAL domain-like CBS-domain pair 22
CBS-domain pair Nucleotide cyclase 22
4Fe-4S ferredoxins Nitrite and sulphite reductase 4Fe-4S domain-like 21
TK C-terminal domain-like 4Fe-4S ferredoxins 22
alpha-helical ferredoxin Nucleotide-binding domain 22
Thioredoxin-like Nqo1 FMN-binding domain-like 21
MurE/MurF N-terminal domain MurD-like peptide ligases, peptide-binding domain 21
Aldehyde ferredoxin oxidoreductase, N-terminal domain Aldehyde ferredoxin oxidoreductase, C-terminal domains 21
HSP40/DnaJ peptide-binding domain HSP40/DnaJ peptide-binding domain 22
N-terminal domain of alpha and beta subunits of F1 ATP synthase C-terminal domain of alpha and beta subunits of F1 ATP synthase 21
EF-G C-terminal domain-like Ribosomal protein S5 domain 2-like 21
P-loop containing nucleoside triphosphate hydrolases "Winged helix" DNA-binding domain 22
Zn-dependent exopeptidases Bacterial exopeptidase dimerisation domain 21
Histidine-containing phosphotransfer domain, HPT domain CheW-like 22
Nucleotide-diphospho-sugar transferases Trimeric LpxA-like enzymes 21
E set domains Glycosyl hydrolase domain 22
NAD(P)-binding Rossmann-fold domains Isocitrate/Isopropylmalate dehydrogenase-like 21
Methyl-accepting chemotaxis protein (MCP) signaling domain PilZ domain-like 22
MurE/MurF N-terminal domain MurD-like peptide ligases, catalytic domain 21
6-phosphogluconate dehydrogenase C-terminal domain-like 6-phosphogluconate dehydrogenase C-terminal domain-like 22
Actin-like ATPase domain Heat shock protein 70kD (HSP70), peptide-binding domain 22
HAMP domain-like Methyl-accepting chemotaxis protein (MCP) signaling domain 22
P-loop containing nucleoside triphosphate hydrolases TPR-like 22
Penicillin binding protein dimerisation domain beta-lactamase/transpeptidase-like 21
Actin-like ATPase domain Heat shock protein 70kD (HSP70), C-terminal subdomain 22
6-phosphogluconate dehydrogenase C-terminal domain-like UDP-glucose/GDP-mannose dehydrogenase C-terminal domain 21
P-loop containing nucleoside triphosphate hydrolases Hypothetical protein YjiA, C-terminal domain 21
PK beta-barrel domain-like Phosphoenolpyruvate/pyruvate domain 21
Acyl-CoA N-acyltransferases (Nat) Acyl-CoA N-acyltransferases (Nat) 21
TrkA C-terminal domain-like TrkA C-terminal domain-like 22
PK beta-barrel domain-like PK C-terminal domain-like 21
FAD/NAD(P)-binding domain HI0933 insert domain-like 21
Concanavalin A-like lectins/glucanases Concanavalin A-like lectins/glucanases 22
PYP-like sensor domain (PAS domain) Methyl-accepting chemotaxis protein (MCP) signaling domain 22
FMN-linked oxidoreductases Alpha subunit of glutamate synthase, C-terminal domain 22
Ribosomal protein S5 domain 2-like Type II DNA topoisomerase 22
PreATP-grasp domain post-HMGL domain-like 11
Tex N-terminal region-like RuvA domain 2-like 11
Class I glutamine amidotransferase-like Adenine nucleotide alpha hydrolases-like 11
C-terminal UvrC-binding domain of UvrB RuvA domain 2-like 11
NAD(P)-binding Rossmann-fold domains TrkA C-terminal domain-like 11
MetI-like MetI-like 11
RNase III domain-like dsRNA-binding domain-like 11
Domain of the SRP/SRP receptor G-proteins P-loop containing nucleoside triphosphate hydrolases 11
Zinc beta-ribbon Prokaryotic SH3-related domain 11
CheY-like cAMP-binding domain-like 11
GroEL equatorial domain-like GroEL-intermediate domain like 11
Chaperone J-domain HSC20 (HSCB), C-terminal oligomerisation domain 11
Nitrite/Sulfite reductase N-terminal domain-like Nitrite/Sulfite reductase N-terminal domain-like 11
PIN domain-like Ribonuclease H-like 11
Adenine nucleotide alpha hydrolases-like Homodimeric domain of signal transducing histidine kinase 11
N-acetylmuramoyl-L-alanine amidase-like PGBD-like 11
Eukaryotic type KH-domain (KH-domain type I) Nucleic acid-binding proteins 11
DNA repair protein MutS, domain II P-loop containing nucleoside triphosphate hydrolases 11
Nucleotide-diphospho-sugar transferases RmlC-like cupins 11
HD-domain/PDEase-like TGS-like 11
YlxR-like L30e-like 11
Nicotinic receptor ligand binding domain-like Neurotransmitter-gated ion-channel transmembrane pore 11
GroEL-intermediate domain like GroEL apical domain-like 11
Carbon-nitrogen hydrolase Adenine nucleotide alpha hydrolases-like 11
CheY-like Pentapeptide repeat-like 11
HAMP domain-like PilZ domain-like 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) PRTase-like 11
DNA ligase/mRNA capping enzyme, catalytic domain RuvA domain 2-like 11
Ribonuclease PH domain 2-like Eukaryotic type KH-domain (KH-domain type I) 11
Single hybrid motif TK C-terminal domain-like 11
Calcium-dependent phosphotriesterase CheY-like 11
"Winged helix" DNA-binding domain "Winged helix" DNA-binding domain 11
OMPA-like OmpA-like 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) FMN-linked oxidoreductases 11
Aldolase Single hybrid motif 11
Probable ACP-binding domain of malonyl-CoA ACP transacylase ACP-like 11
P-loop containing nucleoside triphosphate hydrolases Signal peptide-binding domain 11
Thiolase-like Probable ACP-binding domain of malonyl-CoA ACP transacylase 11
PreATP-grasp domain Carbamoyl phosphate synthetase, large subunit connection domain 11
beta-Roll Cadherin-like 11
2Fe-2S ferredoxin-like alpha-helical ferredoxin 11
Prokaryotic type KH domain (KH-domain type II) Prokaryotic type KH domain (KH-domain type II) 11
FAD-binding/transporter-associated domain-like alpha-helical ferredoxin 11
Carbamoyl phosphate synthetase, large subunit connection domain Methylglyoxal synthase-like 11
FMN-linked oxidoreductases Nucleotide-binding domain 11
GAF domain-like Homeodomain-like 11
Homocysteine S-methyltransferase Methionine synthase activation domain-like 11
Rho N-terminal domain-like Nucleic acid-binding proteins 11
FMN-binding split barrel UbiD C-terminal domain-like 11
Thioesterase/thiol ester dehydrase-isomerase Isocitrate/Isopropylmalate dehydrogenase-like 11
FMN-dependent nitroreductase-like FMN-dependent nitroreductase-like 11
vWA-like Tubulin nucleotide-binding domain-like 11
Prokaryotic type KH domain (KH-domain type II) Ribosomal protein S3 C-terminal domain 11
ClpP/crotonase 6-phosphogluconate dehydrogenase C-terminal domain-like 11
NAD(P)-binding Rossmann-fold domains 1-deoxy-D-xylulose-5-phosphate reductoisomerase, C-terminal domain 11
PIN domain-like 5' to 3' exonuclease, C-terminal subdomain 11
Calcium-dependent phosphotriesterase Histidine-containing phosphotransfer domain, HPT domain 11
PPK N-terminal domain-like PHP14-like 11
Cobalamin (vitamin B12)-binding domain Radical SAM enzymes 11
Nucleotidyltransferase Nucleotidyltransferase 11
4Fe-4S ferredoxins Riboflavin synthase domain-like 11
L30e-like alpha/beta knot 11
Single hybrid motif HlyD-like secretion proteins 11
Toll/Interleukin receptor TIR domain TPR-like 11
S-adenosylmethionine synthetase S-adenosylmethionine synthetase 11
Trigger factor ribosome-binding domain Triger factor/SurA peptide-binding domain-like 11
Homo-oligomeric flavin-containing Cys decarboxylases, HFCD CoaB-like 11
FAD/NAD(P)-binding domain 4Fe-4S ferredoxins 11
Aconitase B, N-terminal domain LeuD/IlvD-like 11
MFS general substrate transporter Acetyl-CoA synthetase-like 11
ACT-like Formyltransferase 11
Voltage-gated potassium channels E set domains 11
P-loop containing nucleoside triphosphate hydrolases RecA protein, C-terminal domain 11
Metal cation-transporting ATPase, ATP-binding domain N HAD-like 11
ThrRS/AlaRS common domain Class II aaRS ABD-related 11
Single hybrid motif Trimeric LpxA-like enzymes 11
TGS-like Class II aaRS and biotin synthetases 11
GIY-YIG endonuclease RuvA domain 2-like 11
2,3-Bisphosphoglycerate-independent phosphoglycerate mutase, substrate-binding domain Alkaline phosphatase-like 11
PEP carboxykinase N-terminal domain PEP carboxykinase-like 11
PH0987 N-terminal domain-like Cyclophilin-like 11
Thioredoxin-like TPR-like 11
Ferritin-like Rubredoxin-like 11
Putative DNA-binding domain mu transposase, C-terminal domain 11
Protein kinase-like (PK-like) PYP-like sensor domain (PAS domain) 11
Glutathione synthetase ATP-binding domain-like Phosphoenolpyruvate/pyruvate domain 11
FKBP-like FKBP-like 11
MgtE N-terminal domain-like CorA soluble domain-like 11
Ribonuclease H-like Nucleic acid-binding proteins 11
"Winged helix" DNA-binding domain MOP-like 11
Trimeric LpxA-like enzymes Trimeric LpxA-like enzymes 11
Nucleotide-binding domain Nucleotide-binding domain 11
DnaK suppressor protein DksA, alpha-hairpin domain Glucocorticoid receptor-like (DNA-binding domain) 11
PIN domain-like DNA/RNA polymerases 11
Nucleic acid-binding proteins Prokaryotic type KH domain (KH-domain type II) 11
Transmembrane di-heme cytochromes a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) 11
Quinoprotein alcohol dehydrogenase-like Quinoprotein alcohol dehydrogenase-like 11
lambda integrase-like, N-terminal domain DNA breaking-rejoining enzymes 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) SIS domain 11
Nucleic acid-binding proteins Anticodon-binding domain of PheRS 11
MoaD/ThiS ThiG-like 11
Ankyrin repeat Ankyrin repeat 11
Calcium-dependent phosphotriesterase Homodimeric domain of signal transducing histidine kinase 11
Chemotaxis receptor methyltransferase CheR, N-terminal domain EAL domain-like 11
RuvA domain 2-like DNA helicase RuvA subunit, C-terminal domain 11
Thiolase-like alpha/beta-Hydrolases 11
RBP11-like subunits of RNA polymerase C-terminal domain of RNA polymerase alpha subunit 11
Cytochrome c Cytochrome c1 subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase), transmembrane anchor 11
Nucleotide-diphospho-sugar transferases TPR-like 11
Dihydropteroate synthetase-like Nitrite and sulphite reductase 4Fe-4S domain-like 11
Aldolase Xylose isomerase-like 11
Poly A polymerase C-terminal region-like ACT-like 11
PUA domain-like Ribosomal protein S5 domain 2-like 11
YhbC-like, N-terminal domain YhbC-like, C-terminal domain 11
Putative DNA-binding domain Class II aaRS and biotin synthetases 11
Acetyl-CoA synthetase-like Trimeric LpxA-like enzymes 11
EAL domain-like Histidine-containing phosphotransfer domain, HPT domain 11
DNA ligase/mRNA capping enzyme, catalytic domain BRCT domain 11
TPR-like Radical SAM enzymes 11
S-adenosyl-L-methionine-dependent methyltransferases EAL domain-like 11
GAF domain-like Phosphohistidine domain 11
TPR-like ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 11
P-loop containing nucleoside triphosphate hydrolases TRCF domain-like 11
FAD-binding/transporter-associated domain-like Uridine diphospho-N-Acetylenolpyruvylglucosamine reductase, MurB, C-terminal domain 11
P-loop containing nucleoside triphosphate hydrolases Restriction endonuclease-like 11
Ribosomal protein L6 Ribosomal protein L6 11
Class II aaRS and biotin synthetases GAD domain-like 11
Translation initiation factor IF3, N-terminal domain Translation initiation factor IF3, C-terminal domain 11
N-terminal domain of MutM-like DNA repair proteins S13-like H2TH domain 11
PheT/TilS domain Putative DNA-binding domain 11
Radical SAM enzymes Nitrogenase accessory factor-like 11
Translation proteins Translation proteins 11
Fe,Mn superoxide dismutase (SOD), N-terminal domain Fe,Mn superoxide dismutase (SOD), C-terminal domain 11
Nucleic acid-binding proteins DNA helicase RuvA subunit, C-terminal domain 11
2Fe-2S ferredoxin-like Nucleotide cyclase 11
Mechanosensitive channel protein MscS (YggB), transmembrane region Mechanosensitive channel protein MscS (YggB), C-terminal domain 11
GroEL equatorial domain-like GroEL apical domain-like 11
P-loop containing nucleoside triphosphate hydrolases CarD-like 11
Sensory domain-like GAF domain-like 11
NAD(P)-binding Rossmann-fold domains Trimeric LpxA-like enzymes 11
P-loop containing nucleoside triphosphate hydrolases Prokaryotic type KH domain (KH-domain type II) 11
Folate-binding domain beta-Roll 11
Adenine nucleotide alpha hydrolases-like GAF domain-like 11
Carbamoyl phosphate synthetase, small subunit N-terminal domain Class I glutamine amidotransferase-like 11
PUA domain-like alpha/beta knot 11
Nucleotide-binding domain 4Fe-4S ferredoxins 11
Transcription factor NusA, N-terminal domain Rad51 N-terminal domain-like 11
FAD/NAD(P)-binding domain Nitrite/Sulfite reductase N-terminal domain-like 11
YebC-like PFL-like glycyl radical enzymes 11
CBS-domain pair AFP III-like domain 11
PGBD-like L,D-transpeptidase catalytic domain-like 11
post-HMGL domain-like Single hybrid motif 11
Rho N-terminal domain-like P-loop containing nucleoside triphosphate hydrolases 11
Serine metabolism enzymes domain ACT-like 11
RuvA domain 2-like RuvA domain 2-like 11
ACP-like Trimeric LpxA-like enzymes 11
beta-lactamase/transpeptidase-like Penicillin-binding protein associated domain 11
Fumarate reductase respiratory complex transmembrane subunits Nucleotide cyclase 11
Transcription factor NusA, N-terminal domain Nucleic acid-binding proteins 11
DNA repair protein MutS, domain I DNA repair protein MutS, domain II 11
Nucleotidyltransferase substrate binding subunit/domain Poly A polymerase C-terminal region-like 11
LysM domain Duplicated hybrid motif 11
N-terminal domain of DnaB helicase P-loop containing nucleoside triphosphate hydrolases 11
N-terminal domain of bifunctional PutA protein FAD-linked oxidoreductase 11
P-loop containing nucleoside triphosphate hydrolases TrpR-like 11
CBS-domain pair CBS-domain pair 11
5' to 3' exonuclease, C-terminal subdomain DNA/RNA polymerases 11
AhpD-like AhpD-like 11
Transmembrane di-heme cytochromes Cytochrome c1 subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase), transmembrane anchor 11
a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) Cytochrome c 11
Carbamate kinase-like ACT-like 11
Voltage-gated potassium channels cAMP-binding domain-like 11
PUA domain-like S-adenosyl-L-methionine-dependent methyltransferases 11
lambda repressor-like DNA-binding domains LexA/Signal peptidase 11
FabD/lysophospholipase-like NAD(P)-binding Rossmann-fold domains 11
5' to 3' exonuclease, C-terminal subdomain Ribonuclease H-like 11
FMT C-terminal domain-like ClpP/crotonase 11
MFS general substrate transporter Glycerol-3-phosphate (1)-acyltransferase 11
Adenine nucleotide alpha hydrolases-like ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 11
CBS-domain pair Xylose isomerase-like 11
Creatinase/prolidase N-terminal domain Creatinase/prolidase N-terminal domain 11
FAD-linked oxidoreductase ALDH-like 11
Nucleotidylyl transferase Riboflavin kinase-like 11
Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 1-deoxy-D-xylulose-5-phosphate reductoisomerase, C-terminal domain 11
Aconitase B, N-terminal domain Aconitase iron-sulfur domain 11
Nucleotidyltransferase TGS-like 11
ClpP/crotonase NAD(P)-binding Rossmann-fold domains 11
Homocysteine S-methyltransferase Dihydropteroate synthetase-like 11
Mechanosensitive channel protein MscS (YggB), transmembrane region Sm-like ribonucleoproteins 11
Dihydropteroate synthetase-like Cobalamin (vitamin B12)-binding domain 11
Rudiment single hybrid motif Aldolase 11
DnaJ/Hsp40 cysteine-rich domain HSP40/DnaJ peptide-binding domain 11
Methyl-accepting chemotaxis protein (MCP) signaling domain Methyl-accepting chemotaxis protein (MCP) signaling domain 11
Pre-protein crosslinking domain of SecA Helical scaffold and wing domains of SecA 11
4'-phosphopantetheinyl transferase 4'-phosphopantetheinyl transferase 11
PLP-dependent transferases Ornithine decarboxylase C-terminal domain 11
Thioredoxin-like Six-hairpin glycosidases 11
Dihydropteroate synthetase-like Methionine synthase activation domain-like 11
CbiG N-terminal domain-like Tetrapyrrole methylase 11
Eukaryotic type KH-domain (KH-domain type I) P-loop containing nucleoside triphosphate hydrolases 11
NAD(P)-binding Rossmann-fold domains ACP-like 11
Calcium-dependent phosphotriesterase ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 11
FMN-binding split barrel FMN-binding split barrel 11
Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 11
S13-like H2TH domain Glucocorticoid receptor-like (DNA-binding domain) 11
FMN-linked oxidoreductases FAD/NAD(P)-binding domain 11
P-loop containing nucleoside triphosphate hydrolases PYP-like sensor domain (PAS domain) 11
Translation proteins PRC-barrel domain 11
Nqo5-like HydB/Nqo4-like 11
Folate-binding domain Aminomethyltransferase beta-barrel domain 11
Rudiment single hybrid motif post-HMGL domain-like 11
N-terminal domain of MutM-like DNA repair proteins Glucocorticoid receptor-like (DNA-binding domain) 11
Ribonuclease H-like DNA/RNA polymerases 11
FabD/lysophospholipase-like ACP-like 11
Thiolase-like NAD(P)-binding Rossmann-fold domains 11
E set domains E set domains 11
"Winged helix" DNA-binding domain S-adenosyl-L-methionine-dependent methyltransferases 11
Methylesterase CheB, C-terminal domain Nucleotide cyclase 11
Protein kinase-like (PK-like) Histidine-containing phosphotransfer domain, HPT domain 11
Nitrous oxide reductase, N-terminal domain Cupredoxins 11
Terpenoid cyclases/Protein prenyltransferases Family 10 polysaccharide lyase 11
DNA ligase/mRNA capping enzyme, catalytic domain Nucleic acid-binding proteins 11
IlvD/EDD N-terminal domain-like LeuD/IlvD-like 11
HAMP domain-like EAL domain-like 11
Formate/glycerate dehydrogenase catalytic domain-like Serine metabolism enzymes domain 11
Carbamate kinase-like PUA domain-like 11
TrmE connector domain P-loop containing nucleoside triphosphate hydrolases 11
Ribosomal protein S5 domain 2-like Eukaryotic type KH-domain (KH-domain type I) 11
Periplasmic binding protein-like I Nicotinic receptor ligand binding domain-like 11
Tetrapyrrole methylase S-adenosyl-L-methionine-dependent methyltransferases 11
P-loop containing nucleoside triphosphate hydrolases HRDC-like 11
Chromo domain-like Chromo domain-like 11
Metallo-dependent phosphatases 5'-nucleotidase (syn. UDP-sugar hydrolase), C-terminal domain 11
Alpha-L RNA-binding motif S-adenosyl-L-methionine-dependent methyltransferases 11
2Fe-2S ferredoxin-like Molybdenum cofactor-binding domain 11
DNA-glycosylase Nudix 11
Single hybrid motif NAD(P)-binding Rossmann-fold domains 11
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase HSP90 C-terminal domain 11
Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) Translation proteins 11
Insert subdomain of RNA polymerase alpha subunit C-terminal domain of RNA polymerase alpha subunit 11
UDP-Glycosyltransferase/glycogen phosphorylase S-adenosyl-L-methionine-dependent methyltransferases 11
GAF domain-like Phosphoenolpyruvate/pyruvate domain 11
Radical SAM enzymes Radical SAM enzymes 11
Sigma3 and sigma4 domains of RNA polymerase sigma factors NTF2-like 11
TPR-like GAF domain-like 11
CbiG N-terminal domain-like CobE/GbiG C-terminal domain-like 11
Protein kinase-like (PK-like) TPR-like 11
HD-domain/PDEase-like Nucleotidyltransferase 11
Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain ACT-like 11
NAD(P)-binding Rossmann-fold domains Glutamyl tRNA-reductase dimerization domain 11
Ribonuclease PH domain 2-like Nucleic acid-binding proteins 11
Nucleotidylyl transferase Alpha-L RNA-binding motif 11
beta-Roll Concanavalin A-like lectins/glucanases 11
P-loop containing nucleoside triphosphate hydrolases TGS-like 11
Periplasmic binding protein-like I Neurotransmitter-gated ion-channel transmembrane pore 11
CBS-domain pair Aldolase 11
GAF domain-like Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain 11
Glutathione synthetase ATP-binding domain-like Glutathione synthetase ATP-binding domain-like 11
YjeF N-terminal domain-like Ribokinase-like 11
Class II aaRS and biotin synthetases C-terminal domain of ProRS 11
Rhodanese/Cell cycle control phosphatase Rhodanese/Cell cycle control phosphatase 11
Homodimeric domain of signal transducing histidine kinase EAL domain-like 11
Class II aaRS and biotin synthetases Translation proteins 11
a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) Cytochrome c1 subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase), transmembrane anchor 11
2Fe-2S ferredoxin-like CO dehydrogenase molybdoprotein N-domain-like 11
2Fe-2S ferredoxin-like ADC-like 11
FliG FliG 11
Transcription factor NusA, N-terminal domain Prokaryotic type KH domain (KH-domain type II) 11
NagB/RpiA/CoA transferase-like 4Fe-4S ferredoxins 11
Calcium ATPase, transduction domain A Metal cation-transporting ATPase, ATP-binding domain N 11
HRDC-like HRDC-like 11
DNA/RNA polymerases Lesion bypass DNA polymerase (Y-family), little finger domain 11
PreATP-grasp domain PreATP-grasp domain 11
Hsp33 domain HSP33 redox switch-like 11
DNA repair protein MutS, domain II DNA repair protein MutS, domain III 11
Glutathione synthetase ATP-binding domain-like Aldolase 11
Metal cation-transporting ATPase, ATP-binding domain N Calcium ATPase, transmembrane domain M 11
PHP14-like Phospholipase D/nuclease 11
PUA domain-like P-loop containing nucleoside triphosphate hydrolases 11
Sm-like ribonucleoproteins Mechanosensitive channel protein MscS (YggB), C-terminal domain 11
Glutamine synthetase/guanido kinase GatB/YqeY motif 11
Thiolase-like ACP-like 11
HCP-like Sporulation related repeat 11
Sensory domain-like HAMP domain-like 11
Multiheme cytochromes Multiheme cytochromes 11
gp5 N-terminal domain-like Phage fibre proteins 11
CheW-like CheW-like 11
Periplasmic binding protein-like II NosL/MerB-like 11
FAD-linked reductases, C-terminal domain 4Fe-4S ferredoxins 11
Tex N-terminal region-like Ribonuclease H-like 11
Cobalamin (vitamin B12)-binding domain Methionine synthase activation domain-like 11
cAMP-binding domain-like EAL domain-like 11
AFP III-like domain Xylose isomerase-like 11
"Winged helix" DNA-binding domain PLP-dependent transferases 11
Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain Nucleotidylyl transferase 11
Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) ThrRS/AlaRS common domain 11
Nucleic acid-binding proteins PheT/TilS domain 11
"Winged helix" DNA-binding domain Thioredoxin-like 11
Methionine synthase domain Cobalamin (vitamin B12)-binding domain 11
Ribonuclease PH domain 2-like Ribonuclease PH domain 2-like 11
Barwin-like endoglucanases Sporulation related repeat 11
Glucocorticoid receptor-like (DNA-binding domain) P-loop containing nucleoside triphosphate hydrolases 11
Formyltransferase ClpP/crotonase 11
Homocysteine S-methyltransferase Cobalamin (vitamin B12)-binding domain 11
ValRS/IleRS/LeuRS editing domain tRNA-binding arm 11
Ribonuclease H-like mu transposase, C-terminal domain 11
PreATP-grasp domain Aldolase 11
Insert subdomain of RNA polymerase alpha subunit RBP11-like subunits of RNA polymerase 11
HAMP domain-like PP2C-like 11
NAD(P)-binding Rossmann-fold domains alpha/beta-Hydrolases 11
Ribosomal protein L7/12, oligomerisation (N-terminal) domain ClpS-like 11
Chaperone J-domain DnaJ/Hsp40 cysteine-rich domain 11
Probable ACP-binding domain of malonyl-CoA ACP transacylase NAD(P)-binding Rossmann-fold domains 11
RuBisCO, large subunit, small (N-terminal) domain RuBisCo, C-terminal domain 11
P-loop containing nucleoside triphosphate hydrolases Pre-protein crosslinking domain of SecA 11
Periplasmic binding protein-like II Homodimeric domain of signal transducing histidine kinase 11
Rad51 N-terminal domain-like Rad51 N-terminal domain-like 11
Ribosomal protein S5 domain 2-like HSP90 C-terminal domain 11
NagB/RpiA/CoA transferase-like NagB/RpiA/CoA transferase-like 11
Putative DNA-binding domain Anticodon-binding domain of PheRS 11
Methylated DNA-protein cysteine methyltransferase domain Methylated DNA-protein cysteine methyltransferase, C-terminal domain 11
CBS-domain pair Nucleotide-diphospho-sugar transferases 11
4Fe-4S ferredoxins Ferredoxin reductase-like, C-terminal NADP-linked domain 11
CheY-like PP2C-like 11
Fe-S cluster assembly (FSCA) domain-like P-loop containing nucleoside triphosphate hydrolases 11
ARM repeat ARM repeat 11
FAD/NAD(P)-binding domain Transmembrane di-heme cytochromes 11
Class I glutamine amidotransferase-like GMP synthetase C-terminal dimerisation domain 11
Bacterial fluorinating enzyme, N-terminal domain Bacterial fluorinating enzyme, C-terminal domain 11
Cytidine deaminase-like Dihydrofolate reductase-like 11
Nucleotidylyl transferase tRNA-binding arm 11
Periplasmic binding protein-like II Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain 11
Ribosomal protein S5 domain 2-like DNA mismatch repair protein MutL 11
TGS-like ACT-like 11
Actin-like ATPase domain HD-domain/PDEase-like 11
all-alpha NTP pyrophosphatases all-alpha NTP pyrophosphatases 11
Transmembrane di-heme cytochromes 4Fe-4S ferredoxins 11
Sialidases Sialidases 11
CO dehydrogenase ISP C-domain like Molybdenum cofactor-binding domain 11
Class II aaRS and biotin synthetases Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) 11
Phospholipase D/nuclease Phospholipase D/nuclease 11
NusB-like S-adenosyl-L-methionine-dependent methyltransferases 11
ACP-like alpha/beta-Hydrolases 11
Putative DNA-binding domain Ribonuclease H-like 11
Class II aaRS ABD-related C-terminal domain of ProRS 11
RuvA domain 2-like BRCT domain 11
MgtE N-terminal domain-like Magnesium transport protein CorA, transmembrane region 11
UBA-like Elongation factor Ts (EF-Ts), dimerisation domain 11
alpha/beta-Hydrolases PLP-dependent transferases 11
PRTase-like PRTase-like 11
P-loop containing nucleoside triphosphate hydrolases C-terminal UvrC-binding domain of UvrB 11
"Winged helix" DNA-binding domain LexA/Signal peptidase 11
Dihydropteroate synthetase-like Methionine synthase domain 11
Nucleic acid-binding proteins GAD domain-like 11
P-loop containing nucleoside triphosphate hydrolases Helical scaffold and wing domains of SecA 11
GIY-YIG endonuclease C-terminal UvrC-binding domain of UvrB 11
L9 N-domain-like Ribosomal protein L9 C-domain 11
Cobalamin (vitamin B12)-dependent enzymes Cobalamin (vitamin B12)-binding domain 11
GAF domain-like PP2C-like 11
Class II aaRS and biotin synthetases Anticodon-binding domain of PheRS 11
Glutathione synthetase ATP-binding domain-like Carbamoyl phosphate synthetase, large subunit connection domain 11
Glutamyl tRNA-reductase catalytic, N-terminal domain NAD(P)-binding Rossmann-fold domains 11
S-adenosyl-L-methionine-dependent methyltransferases Nucleotide cyclase 11
Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 11
Chemotaxis receptor methyltransferase CheR, N-terminal domain Nucleotide cyclase 11
CBS-domain pair Inosine monophosphate dehydrogenase (IMPDH) 11
FabD/lysophospholipase-like alpha/beta-Hydrolases 11
Prokaryotic type I DNA topoisomerase Zinc beta-ribbon 11
CarD-like TRCF domain-like 11
TGS-like ThrRS/AlaRS common domain 11
Translation proteins ThrRS/AlaRS common domain 11
Homocysteine S-methyltransferase Methionine synthase domain 11
Ribonuclease H-like RuvA domain 2-like 11
Class I glutamine amidotransferase-like LD-carboxypeptidase A C-terminal domain-like 11
FAD-linked oxidases, C-terminal domain alpha-helical ferredoxin 11
Tex N-terminal region-like Nucleic acid-binding proteins 11
Class II aaRS and biotin synthetases C-terminal domain of transcriptional repressors 11
Acetyl-CoA synthetase-like ACP-like 11
HlyD-like secretion proteins HlyD-like secretion proteins 11
CO dehydrogenase ISP C-domain like CO dehydrogenase molybdoprotein N-domain-like 11
FAD/NAD(P)-binding domain Riboflavin synthase domain-like 11
UDP-Glycosyltransferase/glycogen phosphorylase UDP-Glycosyltransferase/glycogen phosphorylase 11
P-loop containing nucleoside triphosphate hydrolases Smc hinge domain 11
4Fe-4S ferredoxins ADC-like 11
Nucleic acid-binding proteins Putative DNA-binding domain 11
Thioesterase/thiol ester dehydrase-isomerase Thioesterase/thiol ester dehydrase-isomerase 11
TolB, N-terminal domain Tricorn protease N-terminal domain 11
Fumarate reductase respiratory complex transmembrane subunits 2Fe-2S ferredoxin-like 11
lambda repressor-like DNA-binding domains P-loop containing nucleoside triphosphate hydrolases 11
Ankyrin repeat Quinoprotein alcohol dehydrogenase-like 11
PDZ domain-like ClpP/crotonase 11
Acyl-CoA N-acyltransferases (Nat) Nudix 11
Obg GTP-binding protein N-terminal domain P-loop containing nucleoside triphosphate hydrolases 11
Methylglyoxal synthase-like Cytidine deaminase-like 11
Sigma3 and sigma4 domains of RNA polymerase sigma factors Sigma3 and sigma4 domains of RNA polymerase sigma factors 11
S-adenosyl-L-methionine-dependent methyltransferases Putative methyltransferase TM0872, insert domain 11
Chelatase Chelatase 11
PPK N-terminal domain-like Phospholipase D/nuclease 11
OmpA-like OmpA-like 11
Glutathione synthetase ATP-binding domain-like post-HMGL domain-like 11
Cytochrome c oxidase subunit II-like, transmembrane region Cupredoxins 11
S-adenosyl-L-methionine-dependent methyltransferases NAD(P)-binding Rossmann-fold domains 11
CheC-like CheY-like 11
Thiolase-like FabD/lysophospholipase-like 11
"Winged helix" DNA-binding domain GST C-terminal domain-like 11
Adenine nucleotide alpha hydrolases-like Argininosuccinate synthetase, C-terminal domain 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) Alpha subunit of glutamate synthase, C-terminal domain 11
PP2C-like ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 11
Homodimeric domain of signal transducing histidine kinase Nucleotide cyclase 11
P-loop containing nucleoside triphosphate hydrolases Initiation factor IF2/eIF5b, domain 3 11
CBS-domain pair PYP-like sensor domain (PAS domain) 11
Methionine synthase domain Methionine synthase activation domain-like 11
CobE/GbiG C-terminal domain-like Tetrapyrrole methylase 11
dsRNA-binding domain-like Ribosomal protein S5 domain 2-like 11
(Trans)glycosidases Nucleotide-diphospho-sugar transferases 11
Nucleotide-diphospho-sugar transferases IpsF-like 11
Glycerol-3-phosphate (1)-acyltransferase Acetyl-CoA synthetase-like 11
Methylesterase CheB, C-terminal domain EAL domain-like 11
Glutamine synthetase, N-terminal domain Glutamine synthetase/guanido kinase 11
AraD/HMP-PK domain-like NAD(P)-binding Rossmann-fold domains 11
Single hybrid motif Thiamin diphosphate-binding fold (THDP-binding) 11
DNA clamp DNA clamp 11
Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases tRNA-binding arm 11
Periplasmic binding protein-like II Nucleotide cyclase 11
Translation proteins Initiation factor IF2/eIF5b, domain 3 11
Sigma2 domain of RNA polymerase sigma factors NTF2-like 11
PreATP-grasp domain Methylglyoxal synthase-like 11
Glutamyl tRNA-reductase catalytic, N-terminal domain Glutamyl tRNA-reductase dimerization domain 11
Ribosomal protein S5 domain 2-like Nucleic acid-binding proteins 11
HCP-like Caspase-like 11
Glutathione synthetase ATP-binding domain-like Phosphohistidine domain 11
PurM C-terminal domain-like PurM C-terminal domain-like 11
P-loop containing nucleoside triphosphate hydrolases Histidine-containing phosphotransfer domain, HPT domain 11
Ribonuclease H-like HRDC-like 11
post-HMGL domain-like 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain 11
Ribosomal L11/L12e N-terminal domain Ribosomal protein L11, C-terminal domain 11
Trigger factor ribosome-binding domain FKBP-like 11
Periplasmic binding protein-like II ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 11
Enolase N-terminal domain-like Enolase C-terminal domain-like 11
Nucleotidyltransferase substrate binding subunit/domain ACT-like 11
DNA repair protein MutS, domain III P-loop containing nucleoside triphosphate hydrolases 11
Probable ACP-binding domain of malonyl-CoA ACP transacylase alpha/beta-Hydrolases 11
Nucleotidyltransferase substrate binding subunit/domain Nucleotidyltransferase substrate binding subunit/domain 11
FAD/NAD(P)-binding domain Ferredoxin reductase-like, C-terminal NADP-linked domain 11
GroES-like Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 11
DNA repair protein MutS, domain I P-loop containing nucleoside triphosphate hydrolases 11
Prokaryotic type KH domain (KH-domain type II) Rad51 N-terminal domain-like 11
NAD(P)-binding Rossmann-fold domains Serine metabolism enzymes domain 11
tRNA-binding arm Class II aaRS and biotin synthetases 11
CoA-transferase family III (CaiB/BaiF) CoA-transferase family III (CaiB/BaiF) 11
TGS-like Class II aaRS ABD-related 11
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase DNA mismatch repair protein MutL 11
N-terminal domain of bifunctional PutA protein ALDH-like 11
GAF domain-like Nucleotide cyclase 11
DNA repair protein MutS, domain I DNA repair protein MutS, domain III 11
Nucleic acid-binding proteins BRCT domain 11
HD-domain/PDEase-like ACT-like 11
Glutathione synthetase ATP-binding domain-like Methylglyoxal synthase-like 11
Nqo1 FMN-binding domain-like alpha-helical ferredoxin 11
YajQ-like YajQ-like 11
Periplasmic binding protein-like II ACT-like 11
PheT/TilS domain Class II aaRS and biotin synthetases 11
Nitrite and sulphite reductase 4Fe-4S domain-like Nitrite and sulphite reductase 4Fe-4S domain-like 11
Creatinase/prolidase N-terminal domain Creatinase/aminopeptidase 11
Pyruvate-ferredoxin oxidoreductase, PFOR, domain III 4Fe-4S ferredoxins 11
Calcium-dependent phosphotriesterase Calcium-dependent phosphotriesterase 11
Formate/glycerate dehydrogenase catalytic domain-like ACT-like 11
Nucleotide-binding domain FAD/NAD(P)-binding domain 11
FAD/NAD(P)-binding domain Nitrite and sulphite reductase 4Fe-4S domain-like 11
Sensory domain-like HD-domain/PDEase-like 11
Toll/Interleukin receptor TIR domain P-loop containing nucleoside triphosphate hydrolases 11
Adenine nucleotide alpha hydrolases-like GMP synthetase C-terminal dimerisation domain 11
Nucleic acid-binding proteins S-adenosyl-L-methionine-dependent methyltransferases 11
Nucleic acid-binding proteins Rad51 N-terminal domain-like 11
MOP-like MOP-like 11
Coiled-coil domain of nucleotide exchange factor GrpE Head domain of nucleotide exchange factor GrpE 11
Hypothetical protein SAV1430 Fe-S cluster assembly (FSCA) domain-like 11
PheT/TilS domain Anticodon-binding domain of PheRS 11
"Winged helix" DNA-binding domain Dimeric alpha+beta barrel 11

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