SUPERFAMILY 1.75 HMM library and genome assignments server

Domain combination pairs in Lodderomyces elongisporus NRRL YB-4239

All pairs of domain combinations at the superfamily level are listed here.
The identification of domain pairs does not account for the possibility of non-contiguous domains. Inserted, or interlaced, domains are seen as having a simple pair ordering.

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Adjacent domain pairs graph

Graph of adjacent domain pairs.


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Domain combination pairs

881 domain combination pairs.
Click on a column heading to sort that column, or the 'View' button to see domain architetures for that domain pair combination.

Superfamily (N) Superfamily (C) Number of occurrances Number unique
P-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases 6933
Actin-like ATPase domain Actin-like ATPase domain 2713
DNA/RNA polymerases Ribonuclease H-like 2410
GroES-like NAD(P)-binding Rossmann-fold domains 173
TPR-like TPR-like 158
P-loop containing nucleoside triphosphate hydrolases Translation proteins 1410
RNA-binding domain, RBD RNA-binding domain, RBD 148
ABC transporter transmembrane region P-loop containing nucleoside triphosphate hydrolases 148
Calcium ATPase, transduction domain A HAD-like 136
HAD-like Calcium ATPase, transmembrane domain M 136
ARM repeat ARM repeat 1311
Calcium ATPase, transduction domain A Calcium ATPase, transmembrane domain M 136
Riboflavin synthase domain-like Ferredoxin reductase-like, C-terminal NADP-linked domain 126
Calcium ATPase, transduction domain A Metal cation-transporting ATPase, ATP-binding domain N 103
Metal cation-transporting ATPase, ATP-binding domain N HAD-like 103
Metal cation-transporting ATPase, ATP-binding domain N Calcium ATPase, transmembrane domain M 103
NAD(P)-binding Rossmann-fold domains 6-phosphogluconate dehydrogenase C-terminal domain-like 93
Nucleotidylyl transferase Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 98
ARM repeat Protein kinase-like (PK-like) 99
GroEL apical domain-like GroEL equatorial domain-like 93
Thioesterase/thiol ester dehydrase-isomerase Thioesterase/thiol ester dehydrase-isomerase 98
Actin-like ATPase domain Heat shock protein 70kD (HSP70), peptide-binding domain 84
Homeodomain-like Homeodomain-like 86
GroEL-intermediate domain like GroEL apical domain-like 82
NAD(P)-binding Rossmann-fold domains Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 83
Ypt/Rab-GAP domain of gyp1p Ypt/Rab-GAP domain of gyp1p 85
Aminoacid dehydrogenase-like, N-terminal domain NAD(P)-binding Rossmann-fold domains 84
WD40 repeat-like WD40 repeat-like 87
LuxS/MPP-like metallohydrolase LuxS/MPP-like metallohydrolase 86
GroEL-intermediate domain like GroEL equatorial domain-like 82
beta-beta-alpha zinc fingers beta-beta-alpha zinc fingers 85
Glutathione synthetase ATP-binding domain-like PreATP-grasp domain 88
FAD/NAD(P)-binding domain FAD/NAD(P)-binding domain 84
FAD/NAD(P)-binding domain FAD-linked reductases, C-terminal domain 85
Cyclin-like Cyclin-like 76
Thioredoxin-like GST C-terminal domain-like 73
Thiolase-like Thiolase-like 72
ABC transporter transmembrane region ABC transporter transmembrane region 75
Nucleic acid-binding proteins P-loop containing nucleoside triphosphate hydrolases 62
Nucleic acid-binding proteins Class II aaRS and biotin synthetases 63
P-loop containing nucleoside triphosphate hydrolases post-AAA+ oligomerization domain-like 63
DNA repair protein MutS, domain III P-loop containing nucleoside triphosphate hydrolases 65
Formate/glycerate dehydrogenase catalytic domain-like NAD(P)-binding Rossmann-fold domains 63
Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) 64
Translation proteins EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 62
Class II aaRS and biotin synthetases Class II aaRS ABD-related 65
Actin-like ATPase domain Heat shock protein 70kD (HSP70), C-terminal subdomain 63
P-loop containing nucleoside triphosphate hydrolases EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 62
Glutathione synthetase ATP-binding domain-like Rudiment single hybrid motif 55
Heat shock protein 70kD (HSP70), peptide-binding domain Heat shock protein 70kD (HSP70), C-terminal subdomain 52
Translation proteins EF-G C-terminal domain-like 55
CRAL/TRIO N-terminal domain CRAL/TRIO domain 54
EF-G C-terminal domain-like EF-G C-terminal domain-like 55
HSP40/DnaJ peptide-binding domain HSP40/DnaJ peptide-binding domain 54
SNARE-like Second domain of Mu2 adaptin subunit (ap50) of ap2 adaptor 53
BAR/IMD domain-like SH3-domain 53
ValRS/IleRS/LeuRS editing domain Nucleotidylyl transferase 54
PreATP-grasp domain Rudiment single hybrid motif 55
P-loop containing nucleoside triphosphate hydrolases EF-G C-terminal domain-like 55
P-loop containing nucleoside triphosphate hydrolases Ribosomal protein S5 domain 2-like 55
FAD/NAD(P)-binding domain Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain 43
ValRS/IleRS/LeuRS editing domain Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 43
Chaperone J-domain DnaJ/Hsp40 cysteine-rich domain 43
Homodimeric domain of signal transducing histidine kinase ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 43
Nucleic acid-binding proteins Nucleic acid-binding proteins 44
P-loop containing nucleoside triphosphate hydrolases TGS-like 41
P-loop containing nucleoside triphosphate hydrolases Smc hinge domain 42
P-loop containing nucleoside triphosphate hydrolases RING/U-box 41
beta-sandwich domain of Sec23/24 Helical domain of Sec23/24 43
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase CheY-like 43
vWA-like C-terminal, gelsolin-like domain of Sec23/24 43
Helical domain of Sec23/24 C-terminal, gelsolin-like domain of Sec23/24 43
Leukotriene A4 hydrolase N-terminal domain Metalloproteases ("zincins"), catalytic domain 44
vWA-like Helical domain of Sec23/24 43
DNA repair protein MutS, domain II DNA repair protein MutS, domain III 44
FAD-binding/transporter-associated domain-like FAD-linked oxidases, C-terminal domain 41
Ribosomal protein S5 domain 2-like Ribonuclease PH domain 2-like 42
Homodimeric domain of signal transducing histidine kinase CheY-like 43
P-loop containing nucleoside triphosphate hydrolases NAD(P)-binding Rossmann-fold domains 42
L domain-like L domain-like 44
DNA repair protein MutS, domain II P-loop containing nucleoside triphosphate hydrolases 44
P-loop containing nucleoside triphosphate hydrolases Aminoacid dehydrogenase-like, N-terminal domain 42
beta-sandwich domain of Sec23/24 C-terminal, gelsolin-like domain of Sec23/24 43
Thioredoxin-like Thioredoxin-like 44
Thiamin diphosphate-binding fold (THDP-binding) DHS-like NAD/FAD-binding domain 42
DnaJ/Hsp40 cysteine-rich domain HSP40/DnaJ peptide-binding domain 43
Creatinase/prolidase N-terminal domain Creatinase/aminopeptidase 44
beta-sandwich domain of Sec23/24 vWA-like 43
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase Ribosomal protein S5 domain 2-like 44
beta-sandwich domain of Sec23/24 Zn-finger domain of Sec23/24 43
Zn-finger domain of Sec23/24 vWA-like 43
Chaperone J-domain HSP40/DnaJ peptide-binding domain 43
Zn-finger domain of Sec23/24 C-terminal, gelsolin-like domain of Sec23/24 43
Zn-finger domain of Sec23/24 Helical domain of Sec23/24 43
Aconitase iron-sulfur domain LeuD/IlvD-like 41
CoA-dependent acyltransferases CoA-dependent acyltransferases 33
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 32
Sec63 N-terminal domain-like E set domains 33
P-loop containing nucleoside triphosphate hydrolases C-terminal domain of alpha and beta subunits of F1 ATP synthase 33
Aminopeptidase/glucanase lid domain Zn-dependent exopeptidases 31
ARM repeat Clathrin adaptor appendage domain 32
PA domain Zn-dependent exopeptidases 33
Phosphoglucomutase, first 3 domains Phosphoglucomutase, C-terminal domain 33
SMAD/FHA domain Protein kinase-like (PK-like) 31
DNA repair protein MutS, domain I DNA repair protein MutS, domain II 33
Translation proteins Ribosomal protein S5 domain 2-like 33
CBS-domain pair CBS-domain pair 33
P-loop containing nucleoside triphosphate hydrolases Phosphoglycerate mutase-like 32
Acyl-CoA dehydrogenase NM domain-like Acyl-CoA dehydrogenase C-terminal domain-like 33
RING/U-box RING/U-box 33
BAR/IMD domain-like GTPase activation domain, GAP 33
GINS helical bundle-like PriA/YqbF domain 32
EF-G C-terminal domain-like Ribosomal protein S5 domain 2-like 33
ENTH/VHS domain GAT-like domain 33
Cullin homology domain "Winged helix" DNA-binding domain 33
DNA ligase/mRNA capping enzyme, catalytic domain Nucleic acid-binding proteins 33
Cupredoxins Cupredoxins 32
Multidrug resistance efflux transporter EmrE Multidrug resistance efflux transporter EmrE 32
DNA repair protein MutS, domain I P-loop containing nucleoside triphosphate hydrolases 33
RNase III domain-like dsRNA-binding domain-like 33
Glutathione synthetase ATP-binding domain-like Single hybrid motif 33
P-loop containing nucleoside triphosphate hydrolases Sec63 N-terminal domain-like 33
PIN domain-like 5' to 3' exonuclease, C-terminal subdomain 33
WD40 repeat-like Quinoprotein alcohol dehydrogenase-like 33
Ribosomal protein S5 domain 2-like GHMP Kinase, C-terminal domain 32
P-loop containing nucleoside triphosphate hydrolases Tropomyosin 33
Aldolase post-HMGL domain-like 32
Cdc48 domain 2-like P-loop containing nucleoside triphosphate hydrolases 33
(Phosphotyrosine protein) phosphatases II (Phosphotyrosine protein) phosphatases II 33
Nucleic acid-binding proteins Translation proteins SH3-like domain 33
Bromodomain Bromodomain 32
P-loop containing nucleoside triphosphate hydrolases FtsH protease domain-like 32
Tubulin nucleotide-binding domain-like Tubulin C-terminal domain-like 31
DNA-binding domain of Mlu1-box binding protein MBP1 Ankyrin repeat 32
PreATP-grasp domain Single hybrid motif 33
F-box domain RNI-like 33
Phospholipase D/nuclease Phospholipase D/nuclease 32
(Trans)glycosidases Glycosyl hydrolase domain 33
NAD(P)-binding Rossmann-fold domains LDH C-terminal domain-like 31
P-loop containing nucleoside triphosphate hydrolases Bromodomain 33
F-box domain WD40 repeat-like 33
Eukaryotic type KH-domain (KH-domain type I) Eukaryotic type KH-domain (KH-domain type I) 33
C2 domain (Calcium/lipid-binding domain, CaLB) Protein kinase-like (PK-like) 33
EF-hand EF-hand 33
ADC-like P-loop containing nucleoside triphosphate hydrolases 33
DNA repair protein MutS, domain I DNA repair protein MutS, domain III 33
FYVE/PHD zinc finger FYVE/PHD zinc finger 32
P-loop containing nucleoside triphosphate hydrolases "Winged helix" DNA-binding domain 33
Zn-dependent exopeptidases Bacterial exopeptidase dimerisation domain 33
ADC-like Cdc48 domain 2-like 33
Phosphoglucomutase, first 3 domains Phosphoglucomutase, first 3 domains 33
Rudiment single hybrid motif Single hybrid motif 33
Domain of the SRP/SRP receptor G-proteins P-loop containing nucleoside triphosphate hydrolases 22
Amine oxidase N-terminal region Amine oxidase N-terminal region 21
Protein kinase-like (PK-like) CheY-like 22
Protease propeptides/inhibitors Subtilisin-like 22
Thioredoxin-like Ubiquitin-like 22
Insert subdomain of RNA polymerase alpha subunit RBP11-like subunits of RNA polymerase 22
BRCT domain BRCT domain 22
CCCH zinc finger CCCH zinc finger 22
Voltage-gated potassium channels Voltage-gated potassium channels 22
Translation initiation factor 2 beta, aIF2beta, N-terminal domain Zinc-binding domain of translation initiation factor 2 beta 22
ARM repeat Subdomain of clathrin and coatomer appendage domain 21
Nucleic acid-binding proteins Eukaryotic type KH-domain (KH-domain type I) 22
HMA, heavy metal-associated domain HMA, heavy metal-associated domain 22
L9 N-domain-like Ribonuclease H-like 21
MurD-like peptide ligases, catalytic domain MurD-like peptide ligases, peptide-binding domain 22
Thioredoxin-like eEF1-gamma domain 21
NagB/RpiA/CoA transferase-like NagB/RpiA/CoA transferase-like 22
ARM repeat P-loop containing nucleoside triphosphate hydrolases 22
Metalloproteases ("zincins"), catalytic domain ARM repeat 22
PreATP-grasp domain Methylglyoxal synthase-like 22
dsRNA-binding domain-like Ribosomal protein S5 domain 2-like 21
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase DNA mismatch repair protein MutL 22
Nicotinate/Quinolinate PRTase N-terminal domain-like Nicotinate/Quinolinate PRTase C-terminal domain-like 21
tRNA-binding arm Class II aaRS and biotin synthetases 22
Phosphofructokinase Phosphofructokinase 22
Ankyrin repeat POZ domain 22
F1F0 ATP synthase subunit C F1F0 ATP synthase subunit C 21
Carbamoyl phosphate synthetase, large subunit connection domain PreATP-grasp domain 22
WD40 repeat-like DPP6 N-terminal domain-like 22
P-loop containing nucleoside triphosphate hydrolases HAND domain of the nucleosome remodeling ATPase ISWI 22
Amine oxidase N-terminal region Amine oxidase catalytic domain 21
alpha-ketoacid dehydrogenase kinase, N-terminal domain ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 22
"Winged helix" DNA-binding domain "Winged helix" DNA-binding domain 21
HMA, heavy metal-associated domain Calcium ATPase, transmembrane domain M 22
POZ domain POZ domain 22
post-HMGL domain-like 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain 21
Nucleotidylyl transferase Ribosomal protein L25-like 22
Glutathione synthetase ATP-binding domain-like Glutathione synthetase ATP-binding domain-like 22
Cation efflux protein transmembrane domain-like Cation efflux protein cytoplasmic domain-like 22
Dehydroquinate synthase-like P-loop containing nucleoside triphosphate hydrolases 21
Clc chloride channel CBS-domain pair 22
MFS general substrate transporter MFS general substrate transporter 21
FAD/NAD(P)-binding domain Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain 21
PUA domain-like P-loop containing nucleoside triphosphate hydrolases 22
Cyclophilin-like TPR-like 21
P-loop containing nucleoside triphosphate hydrolases Homeodomain-like 22
Dehydroquinate synthase-like Aminoacid dehydrogenase-like, N-terminal domain 21
Sec63 N-terminal domain-like Sec63 N-terminal domain-like 22
R1 subunit of ribonucleotide reductase, N-terminal domain PFL-like glycyl radical enzymes 22
FAD/NAD(P)-binding domain FAD/NAD-linked reductases, dimerisation (C-terminal) domain 22
HMA, heavy metal-associated domain Calcium ATPase, transduction domain A 22
Carbamoyl phosphate synthetase, small subunit N-terminal domain Class I glutamine amidotransferase-like 21
SH3-domain PX domain 22
Clathrin adaptor appendage domain Subdomain of clathrin and coatomer appendage domain 21
P-loop containing nucleoside triphosphate hydrolases Initiation factor IF2/eIF5b, domain 3 22
PRTase-like PRTase-like 22
Flavoproteins Riboflavin synthase domain-like 22
Glucocorticoid receptor-like (DNA-binding domain) Glucocorticoid receptor-like (DNA-binding domain) 22
Protein kinase-like (PK-like) Protein kinase-like (PK-like) 22
DPP6 N-terminal domain-like alpha/beta-Hydrolases 21
BAR/IMD domain-like PH domain-like 22
Dehydroquinate synthase-like Aldolase 21
C2 domain (Calcium/lipid-binding domain, CaLB) C2 domain (Calcium/lipid-binding domain, CaLB) 21
beta-sandwich domain of Sec23/24 Protein kinase-like (PK-like) 21
Aldolase 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain 21
Tetrahydrobiopterin biosynthesis enzymes-like Tetrahydrobiopterin biosynthesis enzymes-like 22
N-terminal nucleophile aminohydrolases (Ntn hydrolases) Adenine nucleotide alpha hydrolases-like 22
Nucleotidyltransferase PAP/OAS1 substrate-binding domain 22
HAND domain of the nucleosome remodeling ATPase ISWI Homeodomain-like 22
Glutathione synthetase ATP-binding domain-like Methylglyoxal synthase-like 22
cAMP-binding domain-like cAMP-binding domain-like 22
P-loop containing nucleoside triphosphate hydrolases E set domains 22
Aldolase NAD(P)-binding Rossmann-fold domains 21
vWA-like SPOC domain-like 22
Translational machinery components L30e-like 22
Creatinase/aminopeptidase "Winged helix" DNA-binding domain 22
"Winged helix" DNA-binding domain Sec63 N-terminal domain-like 22
N-terminal domain of alpha and beta subunits of F1 ATP synthase C-terminal domain of alpha and beta subunits of F1 ATP synthase 22
alpha/beta-Hydrolases (Phosphotyrosine protein) phosphatases II 22
WW domain WW domain 22
HMA, heavy metal-associated domain HAD-like 22
Class I glutamine amidotransferase-like Ribulose-phoshate binding barrel 22
PH domain-like Oxysterol-binding protein-like 22
Cullin repeat-like "Winged helix" DNA-binding domain 22
TPR-like "Winged helix" DNA-binding domain 22
Metallo-dependent hydrolases Composite domain of metallo-dependent hydrolases 22
P-loop containing nucleoside triphosphate hydrolases Aldolase 21
Dehydroquinate synthase-like NAD(P)-binding Rossmann-fold domains 21
Glutathione synthetase ATP-binding domain-like Carbamoyl phosphate synthetase, large subunit connection domain 22
DNA/RNA polymerases Lesion bypass DNA polymerase (Y-family), little finger domain 22
EPT/RTPC-like Aldolase 21
"Winged helix" DNA-binding domain E set domains 22
Single hybrid motif Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex 22
Nucleotidyltransferase Poly A polymerase C-terminal region-like 22
PurM N-terminal domain-like PurM C-terminal domain-like 22
ACT-like ACT-like 22
Thiamin diphosphate-binding fold (THDP-binding) TK C-terminal domain-like 22
Transducin (alpha subunit), insertion domain P-loop containing nucleoside triphosphate hydrolases 21
Ankyrin repeat PLC-like phosphodiesterases 21
FYVE/PHD zinc finger RING/U-box 22
E set domains AMPKBI-like 22
Initiation factor IF2/eIF5b, domain 3 Translation proteins 22
Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain 21
ARID-like FYVE/PHD zinc finger 22
ARM repeat WD40 repeat-like 22
Aldolase Aminoacid dehydrogenase-like, N-terminal domain 21
Nucleotide-binding domain FAD-linked reductases, C-terminal domain 22
EPT/RTPC-like NAD(P)-binding Rossmann-fold domains 21
Fe,Mn superoxide dismutase (SOD), N-terminal domain Fe,Mn superoxide dismutase (SOD), C-terminal domain 21
N-terminal domain of alpha and beta subunits of F1 ATP synthase P-loop containing nucleoside triphosphate hydrolases 22
Ribosomal L11/L12e N-terminal domain Ribosomal protein L11, C-terminal domain 21
Transcription factor IIA (TFIIA), alpha-helical domain Transcription factor IIA (TFIIA), beta-barrel domain 22
Acyl-CoA dehydrogenase C-terminal domain-like Acyl-CoA dehydrogenase C-terminal domain-like 22
Ran binding protein zinc finger-like Ran binding protein zinc finger-like 22
Concanavalin A-like lectins/glucanases Concanavalin A-like lectins/glucanases 22
Dehydroquinate synthase-like EPT/RTPC-like 21
SNARE-like SNARE fusion complex 21
UBC-like UBA-like 22
EPT/RTPC-like P-loop containing nucleoside triphosphate hydrolases 21
UBA-like Ubiquitin-like 22
Hypothetical protein SAV1430 Fe-S cluster assembly (FSCA) domain-like 22
CorA soluble domain-like Magnesium transport protein CorA, transmembrane region 22
EF-hand Mitochondrial carrier 22
t-snare proteins SNARE fusion complex 21
TPR-like Chaperone J-domain 22
RING/U-box Cysteine proteinases 22
Zinc beta-ribbon Cyclin-like 22
EPT/RTPC-like Aminoacid dehydrogenase-like, N-terminal domain 21
Trypsin-like serine proteases Trypsin-like serine proteases 22
SAM/Pointed domain Protein kinase-like (PK-like) 22
Carbamoyl phosphate synthetase, large subunit connection domain Methylglyoxal synthase-like 22
GST C-terminal domain-like eEF1-gamma domain 21
Ribosomal protein L6 Ribosomal protein L6 22
Single hybrid motif CoA-dependent acyltransferases 22
SMAD/FHA domain "Winged helix" DNA-binding domain 22
FYVE/PHD zinc finger Clavaminate synthase-like 22
Cullin repeat-like Cullin homology domain 22
Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Cytochrome b5-like heme/steroid binding domain 11
"Winged helix" DNA-binding domain Protein kinase-like (PK-like) 11
Amidase signature (AS) enzymes Glutathione synthetase ATP-binding domain-like 11
RNA-binding domain, RBD Ran binding protein zinc finger-like 11
FAD-linked reductases, C-terminal domain Thioredoxin-like 11
beta-sandwich domain of Sec23/24 SET domain 11
PurM N-terminal domain-like PurM N-terminal domain-like 11
PDZ domain-like PDZ domain-like 11
Putative DNA-binding domain Class II aaRS and biotin synthetases 11
VPS9 domain Ankyrin repeat 11
Cadherin-like Cadherin-like 11
UBA-like XPC-binding domain 11
PH domain-like "Winged helix" DNA-binding domain 11
Chaperone J-domain E set domains 11
Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 11
Metalloproteases ("zincins"), catalytic domain Mannose-binding lectins 11
Glutathione synthetase ATP-binding domain-like Metallo-dependent hydrolases 11
Chromo domain-like Chromo domain-like 11
HIT-like HIT-like 11
Rudiment single hybrid motif ClpP/crotonase 11
TPR-like RING/U-box 11
beta-sandwich domain of Sec23/24 HAD-like 11
FYSH domain Hypothetical protein AF0491, middle domain 11
Glutathione synthetase ATP-binding domain-like PH0987 N-terminal domain-like 11
Globin-like Riboflavin synthase domain-like 11
WD40 repeat-like Ribonuclease H-like 11
Galactose-binding domain-like (Trans)glycosidases 11
FAD/NAD(P)-binding domain Cytochrome b5-like heme/steroid binding domain 11
Thiamin phosphate synthase Ribokinase-like 11
Homo-oligomeric flavin-containing Cys decarboxylases, HFCD Homo-oligomeric flavin-containing Cys decarboxylases, HFCD 11
PUA domain-like Ribosomal protein S5 domain 2-like 11
FGAM synthase PurL, linker domain PurM C-terminal domain-like 11
FAD/NAD(P)-binding domain 4Fe-4S ferredoxins 11
Ubiquitin-like Cysteine proteinases 11
WD40 repeat-like Cysteine proteinases 11
E set domains Glycosyl hydrolase domain 11
Apolipoprotein A-I Apolipoprotein A-I 11
Cyclophilin-like Cyclophilin-like 11
Hedgehog/intein (Hint) domain Homing endonucleases 11
BEACH domain WD40 repeat-like 11
Class I glutamine amidotransferase-like Class II aaRS and biotin synthetases 11
PH domain-like WD40 repeat-like 11
TPR-like beta-sandwich domain of Sec23/24 11
Glutathione synthetase ATP-binding domain-like Aspartate/ornithine carbamoyltransferase 11
Enolase N-terminal domain-like Enolase C-terminal domain-like 11
Tex N-terminal region-like SH2 domain 11
Chaperone J-domain HSC20 (HSCB), C-terminal oligomerisation domain 11
Thiamin diphosphate-binding fold (THDP-binding) Nitrite/Sulfite reductase N-terminal domain-like 11
HAD-like BRCT domain 11
Tex N-terminal region-like Ribonuclease H-like 11
Nucleic acid-binding proteins eIF2alpha middle domain-like 11
E set domains Ankyrin repeat 11
Cysteine-rich domain Cysteine-rich domain 11
Nucleic acid-binding proteins BRCT domain 11
SH3-domain CAD & PB1 domains 11
PreATP-grasp domain Aldolase 11
Staphylococcal nuclease Tudor/PWWP/MBT 11
Class I glutamine amidotransferase-like GMP synthetase C-terminal dimerisation domain 11
Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 Elongation factor TFIIS domain 2 11
BRCT domain DNA/RNA polymerases 11
PH domain-like Ran binding protein zinc finger-like 11
Chromo domain-like P-loop containing nucleoside triphosphate hydrolases 11
TPR-like HSP20-like chaperones 11
P-loop containing nucleoside triphosphate hydrolases Class I glutamine amidotransferase-like 11
Terpenoid cyclases/Protein prenyltransferases Terpenoid cyclases/Protein prenyltransferases 11
SET domain WW domain 11
TPR-like RNA-binding domain, RBD 11
RNA-binding domain, RBD PABC (PABP) domain 11
2Fe-2S ferredoxin-like 4Fe-4S ferredoxins 11
Dihydropteroate synthetase-like Dihydropteroate synthetase-like 11
NAD(P)-binding Rossmann-fold domains ACT-like 11
beta-sandwich domain of Sec23/24 Cullin repeat-like 11
SAICAR synthase-like SAICAR synthase-like 11
FYVE/PHD zinc finger Homeodomain-like 11
Multidrug efflux transporter AcrB transmembrane domain Multidrug efflux transporter AcrB transmembrane domain 11
ATP-dependent DNA ligase DNA-binding domain Nucleic acid-binding proteins 11
Kelch motif POZ domain 11
ENTH/VHS domain Clathrin adaptor appendage domain 11
PreATP-grasp domain Cyclophilin-like 11
Dcp2 domain-like Nudix 11
"Winged helix" DNA-binding domain RNA-binding domain, RBD 11
beta-sandwich domain of Sec23/24 PX domain 11
beta-sandwich domain of Sec23/24 Ribonuclease H-like 11
2Fe-2S ferredoxin-like Formate dehydrogenase/DMSO reductase, domains 1-3 11
POZ domain Skp1 dimerisation domain-like 11
cAMP-binding domain-like FabD/lysophospholipase-like 11
WD40 repeat-like Bacterial exopeptidase dimerisation domain 11
Thiamin pyrophosphokinase, catalytic domain Thiamin pyrophosphokinase, substrate-binding domain 11
Retrovirus zinc finger-like domains Retrovirus zinc finger-like domains 11
Cysteine-rich domain Protein kinase-like (PK-like) 11
CoA-dependent acyltransferases NAD(P)-binding Rossmann-fold domains 11
Rhodanese/Cell cycle control phosphatase Cysteine proteinases 11
FGAM synthase PurL, linker domain PurM N-terminal domain-like 11
Phosphoenolpyruvate/pyruvate domain PK C-terminal domain-like 11
FYVE/PHD zinc finger SET domain 11
Ankyrin repeat Oxysterol-binding protein-like 11
RING/U-box Quinoprotein alcohol dehydrogenase-like 11
Dimerization-anchoring domain of cAMP-dependent PK regulatory subunit cAMP-binding domain-like 11
4Fe-4S ferredoxins P-loop containing nucleoside triphosphate hydrolases 11
beta-sandwich domain of Sec23/24 Calcium ATPase, transduction domain A 11
Nqo1 FMN-binding domain-like Nqo1 middle domain-like 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) Alpha subunit of glutamate synthase, C-terminal domain 11
Restriction endonuclease-like RuvA domain 2-like 11
L domain-like UBA-like 11
Nitrite/Sulfite reductase N-terminal domain-like Nitrite/Sulfite reductase N-terminal domain-like 11
Flavoproteins Nitrite/Sulfite reductase N-terminal domain-like 11
Translation proteins ThrRS/AlaRS common domain 11
dsRNA-binding domain-like dsRNA-binding domain-like 11
TPR-like RNI-like 11
Ribonuclease H-like Ran binding protein zinc finger-like 11
PreATP-grasp domain N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE) 11
Methyl-accepting chemotaxis protein (MCP) signaling domain ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 11
Variant surface glycoprotein (N-terminal domain) Ribosomal protein S5 domain 2-like 11
PurM N-terminal domain-like Class I glutamine amidotransferase-like 11
ARID-like Clavaminate synthase-like 11
PurS-like Class I glutamine amidotransferase-like 11
SH3-domain Ras GEF 11
PreATP-grasp domain Aspartate/ornithine carbamoyltransferase 11
Tex N-terminal region-like RuvA domain 2-like 11
Nucleic acid-binding proteins "Winged helix" DNA-binding domain 11
(Trans)glycosidases Six-hairpin glycosidases 11
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase Type II DNA topoisomerase 11
L30e-like alpha/beta knot 11
NAD-binding domain of HMG-CoA reductase Substrate-binding domain of HMG-CoA reductase 11
"Winged helix" DNA-binding domain Regulator of G-protein signaling, RGS 11
DBL homology domain (DH-domain) PH domain-like 11
Nucleic acid-binding proteins TPR-like 11
UDP-Glycosyltransferase/glycogen phosphorylase HAD-like 11
PUA domain-like Variant surface glycoprotein (N-terminal domain) 11
NAD(P)-binding Rossmann-fold domains Siroheme synthase middle domains-like 11
DUSP-like Cysteine proteinases 11
Globin-like Ferredoxin reductase-like, C-terminal NADP-linked domain 11
UBC-like RING/U-box 11
Glutamine synthetase, N-terminal domain Glutamine synthetase/guanido kinase 11
Ribonuclease H-like Ribonuclease H-like 11
Methylglyoxal synthase-like Cytidine deaminase-like 11
Rudiment single hybrid motif post-HMGL domain-like 11
Oligoxyloglucan reducing end-specific cellobiohydrolase Oligoxyloglucan reducing end-specific cellobiohydrolase 11
Quinoprotein alcohol dehydrogenase-like Protein kinase-like (PK-like) 11
Translation initiation factor 2 beta, aIF2beta, N-terminal domain ARM repeat 11
C2 domain (Calcium/lipid-binding domain, CaLB) GTPase activation domain, GAP 11
Acyl-CoA N-acyltransferases (Nat) Acyl-CoA N-acyltransferases (Nat) 11
L domain-like PP2C-like 11
F-box domain Clavaminate synthase-like 11
Methyl-accepting chemotaxis protein (MCP) signaling domain Homodimeric domain of signal transducing histidine kinase 11
Staphylococcal nuclease Staphylococcal nuclease 11
Glutathione synthetase ATP-binding domain-like Phosphoglycerate mutase-like 11
Single hybrid motif ClpP/crotonase 11
Sec7 domain ARM repeat 11
Lissencephaly-1 protein (Lis-1, PAF-AH alpha) N-terminal domain WD40 repeat-like 11
CCCH zinc finger RNA-binding domain, RBD 11
Tropomyosin Smc hinge domain 11
SH3-domain PH domain-like 11
YVTN repeat-like/Quinoprotein amine dehydrogenase WD40 repeat-like 11
TGS-like Class II aaRS and biotin synthetases 11
Amidase signature (AS) enzymes PreATP-grasp domain 11
Rudiment single hybrid motif Cyclophilin-like 11
Flavoproteins Nitrite and sulphite reductase 4Fe-4S domain-like 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) FMN-linked oxidoreductases 11
Glutathione synthetase ATP-binding domain-like ClpP/crotonase 11
beta-sandwich domain of Sec23/24 Ypt/Rab-GAP domain of gyp1p 11
Ribosomal protein S5 domain 2-like HSP90 C-terminal domain 11
TATA-box binding protein-like DNA-glycosylase 11
CCCH zinc finger RING/U-box 11
WW domain Hect, E3 ligase catalytic domain 11
FGAM synthase PurL, linker domain Class I glutamine amidotransferase-like 11
Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain 11
PH domain-like UDP-Glycosyltransferase/glycogen phosphorylase 11
RCC1/BLIP-II POZ domain 11
Acetyl-CoA synthetase-like NAD(P)-binding Rossmann-fold domains 11
Calponin-homology domain, CH-domain GTPase activation domain, GAP 11
Translation proteins Translation proteins 11
FabD/lysophospholipase-like NAD(P)-binding Rossmann-fold domains 11
Periplasmic binding protein-like II Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain 11
Acyl-CoA N-acyltransferases (Nat) Bromodomain 11
Protein kinase-like (PK-like) GAF domain-like 11
Tryptophan synthase beta subunit-like PLP-dependent enzymes ACT-like 11
P-loop containing nucleoside triphosphate hydrolases ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 11
Protein kinase-like (PK-like) Homodimeric domain of signal transducing histidine kinase 11
Nitrite and sulphite reductase 4Fe-4S domain-like Nitrite and sulphite reductase 4Fe-4S domain-like 11
Metallo-dependent hydrolases Aspartate/ornithine carbamoyltransferase 11
FAD-linked reductases, C-terminal domain 4Fe-4S ferredoxins 11
CBS-domain pair CAD & PB1 domains 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) SIS domain 11
beta-sandwich domain of Sec23/24 Leucine zipper domain 11
SH3-domain SH3-domain 11
FF domain FF domain 11
BAR/IMD domain-like ArfGap/RecO-like zinc finger 11
WD40 repeat-like RING/U-box 11
S-adenosylmethionine synthetase S-adenosylmethionine synthetase 11
Elongation factor TFIIS domain 2 Zinc beta-ribbon 11
Concanavalin A-like lectins/glucanases PH domain-like 11
PH domain-like GTPase activation domain, GAP 11
L domain-like Nucleotide cyclase 11
WW domain FF domain 11
Zinc beta-ribbon Zinc beta-ribbon 11
Ras GEF GTPase activation domain, GAP 11
beta-sandwich domain of Sec23/24 SAICAR synthase-like 11
Cysteine proteinases UBA-like 11
Nucleic acid-binding proteins eIF-2-alpha, C-terminal domain 11
ENTH/VHS domain RNA-binding domain, RBD 11
6-phosphogluconate dehydrogenase C-terminal domain-like 6-phosphogluconate dehydrogenase C-terminal domain-like 11
BAH domain P-loop containing nucleoside triphosphate hydrolases 11
Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 11
Domain of the SRP/SRP receptor G-proteins Signal peptide-binding domain 11
S-adenosyl-L-methionine-dependent methyltransferases Kelch motif 11
PurS-like PurM C-terminal domain-like 11
Eukaryotic type KH-domain (KH-domain type I) Retrovirus zinc finger-like domains 11
PAH2 domain PAH2 domain 11
Methylglyoxal synthase-like Metallo-dependent hydrolases 11
UBA-like UBA-like 11
RuvA domain 2-like RuvA domain 2-like 11
Ribosomal protein S5 domain 2-like DNA mismatch repair protein MutL 11
Families 57/38 glycoside transferase middle domain Galactose mutarotase-like 11
N-terminal, heterodimerisation domain of RBP7 (RpoE) Nucleic acid-binding proteins 11
Chaperone J-domain beta-beta-alpha zinc fingers 11
HisI-like ALDH-like 11
ENTH/VHS domain FYVE/PHD zinc finger 11
beta-sandwich domain of Sec23/24 FYVE/PHD zinc finger 11
Glycerol-3-phosphate (1)-acyltransferase Glycerol-3-phosphate (1)-acyltransferase 11
BAR/IMD domain-like "Winged helix" DNA-binding domain 11
Ankyrin repeat PH domain-like 11
PX domain GTPase activation domain, GAP 11
Glutathione synthetase ATP-binding domain-like Cyclophilin-like 11
GTPase activation domain, GAP RGC domain-like 11
GroES-like GroES-like 11
Activating enzymes of the ubiquitin-like proteins Activating enzymes of the ubiquitin-like proteins 11
P-loop containing nucleoside triphosphate hydrolases GAF domain-like 11
P-loop containing nucleoside triphosphate hydrolases Hypothetical protein YjiA, C-terminal domain 11
PH0987 N-terminal domain-like Single hybrid motif 11
Zinc hairpin stack RING/U-box 11
GroEL apical domain-like SAICAR synthase-like 11
PAP/OAS1 substrate-binding domain PAP/Archaeal CCA-adding enzyme, C-terminal domain 11
ClpP/crotonase ClpP/crotonase 11
Metalloproteases ("zincins"), catalytic domain Metalloproteases ("zincins"), catalytic domain 11
Eukaryotic RPB5 N-terminal domain RPB5-like RNA polymerase subunit 11
Ubiquitin-like Ubiquitin-like 11
Endosomal sorting complex assembly domain VPS28 C-terminal domain-like 11
Folate-binding domain Aminomethyltransferase beta-barrel domain 11
RING/U-box Homeodomain-like 11
Glutathione synthetase ATP-binding domain-like PurM N-terminal domain-like 11
ENTH/VHS domain I/LWEQ domain 11
Carbon-nitrogen hydrolase Adenine nucleotide alpha hydrolases-like 11
Class II aaRS and biotin synthetases C-terminal domain of ProRS 11
Nucleotide-diphospho-sugar transferases ARM repeat 11
Ubiquitin-like Acid proteases 11
DNA ligase/mRNA capping enzyme, catalytic domain BRCT domain 11
N-terminal domain of adenylylcyclase associated protein, CAP C-terminal domain of adenylylcyclase associated protein 11
Rudiment single hybrid motif Aldolase 11
Ribosomal protein L7/12, oligomerisation (N-terminal) domain ClpS-like 11
PreATP-grasp domain Metallo-dependent hydrolases 11
beta-sandwich domain of Sec23/24 "Winged helix" DNA-binding domain 11
beta-sandwich domain of Sec23/24 SMAD/FHA domain 11
beta-sandwich domain of Sec23/24 Trypsin-like serine proteases 11
HAMP domain-like ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 11
RNA-binding domain, RBD SET domain 11
N-terminal domain of MutM-like DNA repair proteins S13-like H2TH domain 11
GST C-terminal domain-like eEF-1beta-like 11
Ribonuclease H-like RuvA domain 2-like 11
Nucleotide-diphospho-sugar transferases Trimeric LpxA-like enzymes 11
Methionyl-tRNA synthetase (MetRS), Zn-domain Nucleotidylyl transferase 11
Carbamoyl phosphate synthetase, large subunit connection domain Metallo-dependent hydrolases 11
Trypsin-like serine proteases PDZ domain-like 11
PurS-like PurM N-terminal domain-like 11
Nitrite/Sulfite reductase N-terminal domain-like Nitrite and sulphite reductase 4Fe-4S domain-like 11
Galactose mutarotase-like Glycosyl hydrolase domain 11
Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain Nucleotidylyl transferase 11
Pseudouridine synthase Cytidine deaminase-like 11
PX domain PX domain 11
E set domains (Trans)glycosidases 11
Ran binding protein zinc finger-like "Winged helix" DNA-binding domain 11
TRAF domain-like Cysteine proteinases 11
IlvD/EDD N-terminal domain-like LeuD/IlvD-like 11
SpoIIaa-like cAMP-binding domain-like 11
Class II aaRS ABD-related C-terminal domain of ProRS 11
SurE-like Glutathione synthetase ATP-binding domain-like 11
P-loop containing nucleoside triphosphate hydrolases EF-hand 11
ARM repeat Formin homology 2 domain (FH2 domain) 11
Alpha-L RNA-binding motif Pseudouridine synthase 11
Methyl-accepting chemotaxis protein (MCP) signaling domain CheY-like 11
Rap30/74 interaction domains "Winged helix" DNA-binding domain 11
TGS-like ThrRS/AlaRS common domain 11
Cap-Gly domain RNI-like 11
UBA-like Chaperone J-domain 11
YbaK/ProRS associated domain C-terminal domain of ProRS 11
Ankyrin repeat RCC1/BLIP-II 11
PLP-binding barrel Alanine racemase C-terminal domain-like 11
ARM repeat Hect, E3 ligase catalytic domain 11
P-loop containing nucleoside triphosphate hydrolases Homing endonucleases 11
RNI-like RNI-like 11
mRNA decapping enzyme DcpS N-terminal domain HIT-like 11
NagB/RpiA/CoA transferase-like D-ribose-5-phosphate isomerase (RpiA), lid domain 11
CoA-dependent acyltransferases ACP-like 11
Tetrahydrobiopterin biosynthesis enzymes-like 6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase, HPPK 11
Rhodanese/Cell cycle control phosphatase Rhodanese/Cell cycle control phosphatase 11
Histone-fold Histone-fold 11
NSFL1 (p97 ATPase) cofactor p47, SEP domain Ubiquitin-like 11
Rhodanese/Cell cycle control phosphatase (Phosphotyrosine protein) phosphatases II 11
Glucocorticoid receptor-like (DNA-binding domain) GTPase activation domain, GAP 11
Leukotriene A4 hydrolase N-terminal domain ARM repeat 11
Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex CoA-dependent acyltransferases 11
Nucleic acid-binding proteins beta-sandwich domain of Sec23/24 11
Activator of Hsp90 ATPase, Aha1 Bet v1-like 11
Zn-dependent exopeptidases Transferrin receptor-like dimerisation domain 11
Protein kinase-like (PK-like) WD40 repeat-like 11
Eukaryotic initiation factor 4f subunit eIF4g, eIF4e-binding domain ARM repeat 11
Pseudouridine synthase PUA domain-like 11
PLC-like phosphodiesterases C2 domain (Calcium/lipid-binding domain, CaLB) 11
FYVE/PHD zinc finger GroEL apical domain-like 11
SWIB/MDM2 domain SWIB/MDM2 domain 11
Methionyl-tRNA synthetase (MetRS), Zn-domain Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 11
Concanavalin A-like lectins/glucanases P-domain of calnexin/calreticulin 11
Tudor/PWWP/MBT Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 11
beta-sandwich domain of Sec23/24 Metallo-dependent phosphatases 11
Ribonuclease H-like RNA-binding domain, RBD 11
P-loop containing nucleoside triphosphate hydrolases Homodimeric domain of signal transducing histidine kinase 11
Protein kinase-like (PK-like) Class II aaRS and biotin synthetases 11
UBA-like TPR-like 11
Zinc-binding domain of translation initiation factor 2 beta ARM repeat 11
Methylglyoxal synthase-like Aspartate/ornithine carbamoyltransferase 11
Actin depolymerizing proteins SH3-domain 11
PurM C-terminal domain-like PurM C-terminal domain-like 11
FabD/lysophospholipase-like FabD/lysophospholipase-like 11
Siroheme synthase middle domains-like Tetrapyrrole methylase 11
NAD(P)-binding Rossmann-fold domains Thioesterase/thiol ester dehydrase-isomerase 11
DHS-like NAD/FAD-binding domain DHS-like NAD/FAD-binding domain 11
PK beta-barrel domain-like Phosphoenolpyruvate/pyruvate domain 11
Cytochrome b5-like heme/steroid binding domain FMN-linked oxidoreductases 11
HR1 repeat Cysteine-rich domain 11
ISP domain Bet v1-like 11
GST C-terminal domain-like Ribosomal protein L25-like 11
UBC-like Protein kinase-like (PK-like) 11
Ubiquitin-like AN1-like Zinc finger 11
C2 domain (Calcium/lipid-binding domain, CaLB) Hect, E3 ligase catalytic domain 11
Cyclophilin-like PH0987 N-terminal domain-like 11
Radical SAM enzymes Acyl-CoA N-acyltransferases (Nat) 11
Amidase signature (AS) enzymes PH0987 N-terminal domain-like 11
Acetyl-CoA synthetase-like ACP-like 11
HR1 repeat C2 domain (Calcium/lipid-binding domain, CaLB) 11
Galactose-binding domain-like beta-Galactosidase/glucuronidase domain 11
VPS9 domain UBA-like 11
GAF domain-like CheY-like 11
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase HSP90 C-terminal domain 11
Galactose mutarotase-like Six-hairpin glycosidases 11
4'-phosphopantetheinyl transferase 4'-phosphopantetheinyl transferase 11
Ribulose-phoshate binding barrel Tryptophan synthase beta subunit-like PLP-dependent enzymes 11
CHY zinc finger-like RING/U-box 11
Nucleotide-diphospho-sugar transferases Calcium ATPase, transmembrane domain M 11
"Winged helix" DNA-binding domain GTPase activation domain, GAP 11
L domain-like NTF2-like 11
Galactose-binding domain-like Galactose-binding domain-like 11
Ubiquitin-like Cap-Gly domain 11
Zn2/Cys6 DNA-binding domain Zn2/Cys6 DNA-binding domain 11
Amidase signature (AS) enzymes Single hybrid motif 11
SET domain SET domain 11
Glutathione synthetase ATP-binding domain-like Succinyl-CoA synthetase domains 11
Adenine nucleotide alpha hydrolases-like GMP synthetase C-terminal dimerisation domain 11
L domain-like DNase I-like 11
NAD(P)-binding Rossmann-fold domains Galactose mutarotase-like 11
Supernatant protein factor (SPF), C-terminal domain Oxysterol-binding protein-like 11
Hypothetical protein c14orf129, hspc210 TPR-like 11
BSD domain-like BSD domain-like 11
Ras GEF Ras GEF 11
Cysteine proteinases Ribonuclease H-like 11
P-loop containing nucleoside triphosphate hydrolases Signal peptide-binding domain 11
Double Clp-N motif P-loop containing nucleoside triphosphate hydrolases 11
2Fe-2S ferredoxin-like alpha-helical ferredoxin 11
Hedgehog/intein (Hint) domain C-terminal domain of alpha and beta subunits of F1 ATP synthase 11
Pre-PUA domain PUA domain-like 11
Rudiment single hybrid motif PurM N-terminal domain-like 11
FAS1 domain FAS1 domain 11
PX domain PH domain-like 11
Cation efflux protein transmembrane domain-like Cation efflux protein transmembrane domain-like 11
PEP carboxykinase N-terminal domain PEP carboxykinase-like 11
ClpS-like RING/U-box 11
4Fe-4S ferredoxins Formate dehydrogenase/DMSO reductase, domains 1-3 11
Subtilisin-like Galactose-binding domain-like 11
GAF domain-like Homodimeric domain of signal transducing histidine kinase 11
PH domain-like ArfGap/RecO-like zinc finger 11
ACP-like NAD(P)-binding Rossmann-fold domains 11
Ribonuclease H-like SH2 domain 11
HR1 repeat Protein kinase-like (PK-like) 11
post-HMGL domain-like Single hybrid motif 11
N-terminal domain of alpha and beta subunits of F1 ATP synthase Hedgehog/intein (Hint) domain 11
beta-sandwich domain of Sec23/24 Calcium ATPase, transmembrane domain M 11
Thiamin diphosphate-binding fold (THDP-binding) Flavoproteins 11
Protein kinase-like (PK-like) P-loop containing nucleoside triphosphate hydrolases 11
Tricorn protease domain 2 Quinoprotein alcohol dehydrogenase-like 11
ThrRS/AlaRS common domain Class II aaRS and biotin synthetases 11
PH domain-like BSD domain-like 11
PUA domain-like SWIB/MDM2 domain 11
Glutathione synthetase ATP-binding domain-like N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE) 11
Tryptophan synthase beta subunit-like PLP-dependent enzymes CBS-domain pair 11
TGS-like Class II aaRS ABD-related 11
PH domain-like Protein kinase-like (PK-like) 11
FMN-binding split barrel FMN-binding split barrel 11
ArfGap/RecO-like zinc finger UBA-like 11
Ribosomal protein S5 domain 2-like Type II DNA topoisomerase 11
BRCT domain Lesion bypass DNA polymerase (Y-family), little finger domain 11
P-loop containing nucleoside triphosphate hydrolases Hedgehog/intein (Hint) domain 11
SMAD/FHA domain RING/U-box 11
YbaK/ProRS associated domain Class II aaRS and biotin synthetases 11
Polo-box domain Polo-box domain 11
SAM/Pointed domain Ubiquitin-like 11
RCC1/BLIP-II RCC1/BLIP-II 11
PUA domain-like eIF1-like 11
PurS-like FGAM synthase PurL, linker domain 11
Chaperone J-domain Sec63 N-terminal domain-like 11
UDP-Glycosyltransferase/glycogen phosphorylase UDP-Glycosyltransferase/glycogen phosphorylase 11
Nucleotidylyl transferase An anticodon-binding domain of class I aminoacyl-tRNA synthetases 11
SET domain Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 11
Protein kinase-like (PK-like) ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 11
beta-sandwich domain of Sec23/24 Homeodomain-like 11
Concanavalin A-like lectins/glucanases WD40 repeat-like 11
FabD/lysophospholipase-like Inosine monophosphate dehydrogenase (IMPDH) 11
Riboflavin synthase domain-like Riboflavin synthase domain-like 11
PK beta-barrel domain-like PK C-terminal domain-like 11
Nucleotidylyl transferase Alpha-L RNA-binding motif 11
Class I glutamine amidotransferase-like ADC synthase 11
N-terminal domain of eukaryotic peptide chain release factor subunit 1, ERF1 L30e-like 11
Chaperone J-domain CSL zinc finger 11
vWA-like Cysteine-rich domain 11
Carbamoyl phosphate synthetase, large subunit connection domain Aspartate/ornithine carbamoyltransferase 11
Cyclophilin-like Single hybrid motif 11
HAMP domain-like Homodimeric domain of signal transducing histidine kinase 11
TPR-like F-box domain 11
EF-hand Calponin-homology domain, CH-domain 11
HisI-like all-alpha NTP pyrophosphatases 11
UBC-like P-loop containing nucleoside triphosphate hydrolases 11
Protein kinase-like (PK-like) Polo-box domain 11
Class I glutamine amidotransferase-like Adenine nucleotide alpha hydrolases-like 11
FMN-linked oxidoreductases Alpha subunit of glutamate synthase, C-terminal domain 11
ThrRS/AlaRS common domain Class II aaRS ABD-related 11
Ribonuclease H-like HRDC-like 11
Adenine nucleotide alpha hydrolases-like Argininosuccinate synthetase, C-terminal domain 11
Glycoside hydrolase/deacetylase Families 57/38 glycoside transferase middle domain 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) PRTase-like 11
PreATP-grasp domain ClpP/crotonase 11
Tetrahydrobiopterin biosynthesis enzymes-like Dihydropteroate synthetase-like 11
beta-N-acetylhexosaminidase-like domain (Trans)glycosidases 11
PreATP-grasp domain PurM N-terminal domain-like 11
Adenine nucleotide alpha hydrolases-like YjgF-like 11
GST C-terminal domain-like Nucleotidylyl transferase 11
Actin depolymerizing proteins Actin depolymerizing proteins 11
PreATP-grasp domain post-HMGL domain-like 11
Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like 11
FYVE/PHD zinc finger SAICAR synthase-like 11
Nucleotidylyl transferase P-loop containing nucleoside triphosphate hydrolases 11
N-terminal domain of alpha and beta subunits of F1 ATP synthase Homing endonucleases 11
Histone-fold ARM repeat 11
NAD(P)-binding Rossmann-fold domains NAD(P)-binding Rossmann-fold domains 11
CoA-dependent acyltransferases Acetyl-CoA synthetase-like 11
Ubiquitin-like Zn-binding ribosomal proteins 11
RuvA domain 2-like SH2 domain 11
Thiolase-like 4'-phosphopantetheinyl transferase 11
Prokaryotic type KH domain (KH-domain type II) Ribosomal protein S3 C-terminal domain 11
PA domain Transferrin receptor-like dimerisation domain 11
Rad51 N-terminal domain-like P-loop containing nucleoside triphosphate hydrolases 11
Acid proteases DNA/RNA polymerases 11
Supernatant protein factor (SPF), C-terminal domain PH domain-like 11
Metallo-dependent phosphatases 5'-nucleotidase (syn. UDP-sugar hydrolase), C-terminal domain 11
RING/U-box TRAF domain-like 11
NTF2-like UBA-like 11
CinA-like CinA-like 11
TATA-box binding protein-like TATA-box binding protein-like 11
Taf5 N-terminal domain-like WD40 repeat-like 11
Putative DNA-binding domain Putative DNA-binding domain 11
ATP-dependent DNA ligase DNA-binding domain DNA ligase/mRNA capping enzyme, catalytic domain 11
NAD(P)-binding Rossmann-fold domains Succinyl-CoA synthetase domains 11
Cysteine proteinases Calpain large subunit, middle domain (domain III) 11
Methyl-accepting chemotaxis protein (MCP) signaling domain HAMP domain-like 11
Aldolase Single hybrid motif 11
Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 Zinc beta-ribbon 11
Formate/glycerate dehydrogenase catalytic domain-like ACT-like 11
YbaK/ProRS associated domain Class II aaRS ABD-related 11
P-loop containing nucleoside triphosphate hydrolases PRTase-like 11
Glutathione synthetase ATP-binding domain-like PurM C-terminal domain-like 11
Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 WW domain 11
Dom34/Pelota N-terminal domain-like Translational machinery components 11
Glutathione synthetase ATP-binding domain-like Aldolase 11
beta-sandwich domain of Sec23/24 MIR domain 11
SNARE fusion complex SNARE fusion complex 11
Chromo domain-like Acyl-CoA N-acyltransferases (Nat) 11
RING/U-box UBA-like 11
PUA domain-like Nucleotidylyl transferase 11
Arp2/3 complex subunits Arp2/3 complex subunits 11
Mitochondrial carrier Mitochondrial carrier 11
Variant surface glycoprotein (N-terminal domain) P-loop containing nucleoside triphosphate hydrolases 11
beta-Galactosidase/glucuronidase domain (Trans)glycosidases 11
Alpha-L RNA-binding motif Cytidine deaminase-like 11
beta-sandwich domain of Sec23/24 DNA/RNA polymerases 11
DNA clamp DNA clamp 11
6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase, HPPK Dihydropteroate synthetase-like 11
Coiled-coil domain of nucleotide exchange factor GrpE Head domain of nucleotide exchange factor GrpE 11
HMA, heavy metal-associated domain beta-sandwich domain of Sec23/24 11
N-terminal domain of eukaryotic peptide chain release factor subunit 1, ERF1 Translational machinery components 11
DAK1/DegV-like DhaL-like 11
Inhibitor of apoptosis (IAP) repeat Inhibitor of apoptosis (IAP) repeat 11
eIF2alpha middle domain-like eIF-2-alpha, C-terminal domain 11
HCP-like HCP-like 11
Ribokinase-like Heme oxygenase-like 11
DBL homology domain (DH-domain) CAD & PB1 domains 11
MIT domain P-loop containing nucleoside triphosphate hydrolases 11
YrdC/RibB YrdC/RibB 11
Thiamin diphosphate-binding fold (THDP-binding) Nitrite and sulphite reductase 4Fe-4S domain-like 11
PRP4-like WD40 repeat-like 11
Nqo1 FMN-binding domain-like Nqo1C-terminal domain-like 11
Glycoside hydrolase/deacetylase Galactose mutarotase-like 11
PreATP-grasp domain PurM C-terminal domain-like 11
Calponin-homology domain, CH-domain RGC domain-like 11
SWIB/MDM2 domain eIF1-like 11
Chaperone J-domain beta-sandwich domain of Sec23/24 11
(Trans)glycosidases Acyl-CoA N-acyltransferases (Nat) 11
PX domain CAD & PB1 domains 11
GAF domain-like ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 11
WW domain FKBP-like 11
L domain-like RNI-like 11
SAM/Pointed domain PH domain-like 11
Galactose mutarotase-like (Trans)glycosidases 11
Carbamate kinase-like ACT-like 11
Flavoproteins Radical SAM enzymes 11
C2 domain (Calcium/lipid-binding domain, CaLB) ARM repeat 11
Retrovirus zinc finger-like domains Ribonuclease H-like 11
Myosin S1 fragment, N-terminal domain P-loop containing nucleoside triphosphate hydrolases 11
YjgF-like YjgF-like 11
PIN domain-like Nucleic acid-binding proteins 11
Periplasmic binding protein-like II GlnB-like 11
Homing endonucleases C-terminal domain of alpha and beta subunits of F1 ATP synthase 11
Amidase signature (AS) enzymes Cyclophilin-like 11
Eukaryotic DNA topoisomerase I, N-terminal DNA-binding fragment DNA breaking-rejoining enzymes 11
Ypt/Rab-GAP domain of gyp1p EF-hand 11
Dom34/Pelota N-terminal domain-like L30e-like 11
UROD/MetE-like UROD/MetE-like 11
HMA, heavy metal-associated domain Cu,Zn superoxide dismutase-like 11
EF-hand UBA-like 11
C2 domain (Calcium/lipid-binding domain, CaLB) Cysteine-rich domain 11
ENTH/VHS domain SH3-domain 11
Rudiment single hybrid motif N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE) 11
PLP-dependent transferases PLP-dependent transferases 11
RNA-binding domain, RBD DPP6 N-terminal domain-like 11
BRCT domain post-AAA+ oligomerization domain-like 11
PX domain SNARE fusion complex 11
Ribosomal L27 protein-like Nucleic acid-binding proteins 11
P-loop containing nucleoside triphosphate hydrolases CheY-like 11
RING/U-box R3H domain 11
Rudiment single hybrid motif PH0987 N-terminal domain-like 11
HAMP domain-like CheY-like 11
Nucleotidylyl transferase Nucleotidylyl transferase 11
BRCT domain P-loop containing nucleoside triphosphate hydrolases 11
GST C-terminal domain-like Nucleic acid-binding proteins 11
PreATP-grasp domain PH0987 N-terminal domain-like 11
SH3-domain SAM/Pointed domain 11
Glutathione synthetase ATP-binding domain-like post-HMGL domain-like 11
TK C-terminal domain-like Pyruvate-ferredoxin oxidoreductase, PFOR, domain III 11
Calponin-homology domain, CH-domain EB1 dimerisation domain-like 11
Trimeric LpxA-like enzymes Trimeric LpxA-like enzymes 11
FAD/NAD(P)-binding domain Thioredoxin-like 11
PurM C-terminal domain-like Class I glutamine amidotransferase-like 11
UBC-like Ribosomal protein S5 domain 2-like 11
Inosine monophosphate dehydrogenase (IMPDH) Thioesterase/thiol ester dehydrase-isomerase 11
TPR-like Metallo-dependent phosphatases 11
FabD/lysophospholipase-like Thioesterase/thiol ester dehydrase-isomerase 11
all-alpha NTP pyrophosphatases ALDH-like 11
Protein kinase-like (PK-like) KA1-like 11
GAT-like domain Clathrin adaptor appendage domain 11
HAD-like HAD-like 11
Rudiment single hybrid motif PurM C-terminal domain-like 11
"Winged helix" DNA-binding domain DBL homology domain (DH-domain) 11
Nucleotidyltransferase PAP/Archaeal CCA-adding enzyme, C-terminal domain 11
WD40 repeat-like Zn-dependent exopeptidases 11
Clathrin heavy-chain terminal domain ARM repeat 11
P-loop containing nucleoside triphosphate hydrolases SH3-domain 11
Flavoproteins Ferredoxin reductase-like, C-terminal NADP-linked domain 11
Ribosomal L27 protein-like Eukaryotic type KH-domain (KH-domain type I) 11
Nqo1 middle domain-like Nqo1C-terminal domain-like 11
CHY zinc finger-like Zinc hairpin stack 11
PH domain-like BEACH domain 11
UBC-like Class II aaRS and biotin synthetases 11
Amidase signature (AS) enzymes Rudiment single hybrid motif 11
RING/U-box RNA-binding domain, RBD 11
UBA-like Thioredoxin-like 11
UBA-like P-loop containing nucleoside triphosphate hydrolases 11
Carbamate kinase-like PUA domain-like 11
PP2C-like Nucleotide cyclase 11
C2 domain (Calcium/lipid-binding domain, CaLB) WW domain 11
CBS-domain pair Inosine monophosphate dehydrogenase (IMPDH) 11
Concanavalin A-like lectins/glucanases BEACH domain 11
Class II aaRS and biotin synthetases Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) 11
Cytochrome c Cytochrome c1 subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase), transmembrane anchor 11
S-adenosyl-L-methionine-dependent methyltransferases S-adenosyl-L-methionine-dependent methyltransferases 11
Class II aaRS and biotin synthetases Anticodon-binding domain of PheRS 11
Acid proteases Acid proteases 11

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