SUPERFAMILY 1.75 HMM library and genome assignments server

Domain combination pairs in Colwellia psychrerythraea 34H

All pairs of domain combinations at the superfamily level are listed here.
The identification of domain pairs does not account for the possibility of non-contiguous domains. Inserted, or interlaced, domains are seen as having a simple pair ordering.

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Domain combination pairs

802 domain combination pairs.
Click on a column heading to sort that column, or the 'View' button to see domain architetures for that domain pair combination.

Superfamily (N) Superfamily (C) Number of occurrances Number unique
"Winged helix" DNA-binding domain Periplasmic binding protein-like II 641
Homodimeric domain of signal transducing histidine kinase ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 4321
CheY-like C-terminal effector domain of the bipartite response regulators 281
Nucleotide cyclase EAL domain-like 2614
P-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases 2614
Multidrug efflux transporter AcrB transmembrane domain Multidrug efflux transporter AcrB transmembrane domain 238
PYP-like sensor domain (PAS domain) Nucleotide cyclase 2113
P-loop containing nucleoside triphosphate hydrolases Homeodomain-like 208
Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains Multidrug efflux transporter AcrB transmembrane domain 196
Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains 196
Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains Multidrug efflux transporter AcrB transmembrane domain 196
Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains 196
Composite domain of metallo-dependent hydrolases Metallo-dependent hydrolases 196
Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains 185
Homeodomain-like Tetracyclin repressor-like, C-terminal domain 181
Thioredoxin-like GST C-terminal domain-like 171
Sigma2 domain of RNA polymerase sigma factors Sigma3 and sigma4 domains of RNA polymerase sigma factors 163
Multidrug resistance efflux transporter EmrE Multidrug resistance efflux transporter EmrE 162
PYP-like sensor domain (PAS domain) PYP-like sensor domain (PAS domain) 1613
PYP-like sensor domain (PAS domain) ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 1513
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase CheY-like 1513
Homodimeric domain of signal transducing histidine kinase CheY-like 1412
Actin-like ATPase domain Actin-like ATPase domain 144
PYP-like sensor domain (PAS domain) EAL domain-like 139
PYP-like sensor domain (PAS domain) Homodimeric domain of signal transducing histidine kinase 1311
NAD(P)-binding Rossmann-fold domains 6-phosphogluconate dehydrogenase C-terminal domain-like 138
CheY-like Homeodomain-like 132
CheY-like P-loop containing nucleoside triphosphate hydrolases 121
Homeodomain-like Homeodomain-like 113
NAD(P)-binding Rossmann-fold domains Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 116
Aminoacid dehydrogenase-like, N-terminal domain NAD(P)-binding Rossmann-fold domains 103
Acyl-CoA dehydrogenase NM domain-like Acyl-CoA dehydrogenase C-terminal domain-like 103
Thiolase-like Thiolase-like 103
ABC transporter transmembrane region P-loop containing nucleoside triphosphate hydrolases 102
TPR-like TPR-like 98
P-loop containing nucleoside triphosphate hydrolases Translation proteins 96
Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) 95
GroES-like NAD(P)-binding Rossmann-fold domains 92
PYP-like sensor domain (PAS domain) CheY-like 98
FAD/NAD(P)-binding domain FAD-linked reductases, C-terminal domain 93
MurD-like peptide ligases, catalytic domain MurD-like peptide ligases, peptide-binding domain 86
Cytochrome c Cytochrome c 85
Riboflavin synthase domain-like Ferredoxin reductase-like, C-terminal NADP-linked domain 87
PreATP-grasp domain Glutathione synthetase ATP-binding domain-like 74
ACT-like ACT-like 74
lambda repressor-like DNA-binding domains Periplasmic binding protein-like I 71
"Winged helix" DNA-binding domain Dimeric alpha+beta barrel 71
Zn-dependent exopeptidases Bacterial exopeptidase dimerisation domain 71
(Trans)glycosidases Beta-D-glucan exohydrolase, C-terminal domain 63
Thiamin diphosphate-binding fold (THDP-binding) TK C-terminal domain-like 64
GAF domain-like EAL domain-like 65
Homodimeric domain of signal transducing histidine kinase Histidine-containing phosphotransfer domain, HPT domain 65
Formate dehydrogenase/DMSO reductase, domains 1-3 ADC-like 63
DPP6 N-terminal domain-like alpha/beta-Hydrolases 62
Alpha-L RNA-binding motif Pseudouridine synthase 61
GAF domain-like Nucleotide cyclase 65
P-loop containing nucleoside triphosphate hydrolases EF-G C-terminal domain-like 64
lambda repressor-like DNA-binding domains RmlC-like cupins 61
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase Histidine-containing phosphotransfer domain, HPT domain 65
Mechanosensitive channel protein MscS (YggB), transmembrane region Sm-like ribonucleoproteins 63
Nucleotidylyl transferase Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 66
P-loop containing nucleoside triphosphate hydrolases Ribosomal protein S5 domain 2-like 65
Formate/glycerate dehydrogenase catalytic domain-like NAD(P)-binding Rossmann-fold domains 63
Mechanosensitive channel protein MscS (YggB), transmembrane region Mechanosensitive channel protein MscS (YggB), C-terminal domain 52
HAMP domain-like Homodimeric domain of signal transducing histidine kinase 53
Ferredoxin reductase-like, C-terminal NADP-linked domain 2Fe-2S ferredoxin-like 54
Sm-like ribonucleoproteins Mechanosensitive channel protein MscS (YggB), C-terminal domain 52
Translation proteins EF-G C-terminal domain-like 53
Regulatory protein AraC Homeodomain-like 52
GAF domain-like PYP-like sensor domain (PAS domain) 55
Riboflavin synthase domain-like 2Fe-2S ferredoxin-like 54
CheY-like Histidine-containing phosphotransfer domain, HPT domain 54
Folate-binding domain Aminomethyltransferase beta-barrel domain 52
HAMP domain-like ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 53
PLP-binding barrel Alanine racemase C-terminal domain-like 52
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase Ribosomal protein S5 domain 2-like 44
Carboxypeptidase regulatory domain-like Porins 43
HAMP domain-like Nucleotide cyclase 43
Nucleic acid-binding proteins Nucleic acid-binding proteins 43
FAD/NAD(P)-binding domain FAD/NAD-linked reductases, dimerisation (C-terminal) domain 42
PurM N-terminal domain-like PurM C-terminal domain-like 42
EF-G C-terminal domain-like EF-G C-terminal domain-like 42
CheY-like Nucleotide cyclase 44
"Winged helix" DNA-binding domain GntR ligand-binding domain-like 41
LuxS/MPP-like metallohydrolase LuxS/MPP-like metallohydrolase 42
Nucleic acid-binding proteins Class II aaRS and biotin synthetases 43
Thiamin diphosphate-binding fold (THDP-binding) DHS-like NAD/FAD-binding domain 41
FAD-binding/transporter-associated domain-like FAD-linked oxidases, C-terminal domain 43
Thioredoxin-like Thioredoxin-like 43
PreATP-grasp domain Rudiment single hybrid motif 42
cAMP-binding domain-like "Winged helix" DNA-binding domain 41
ACT-like Formyltransferase 41
(Trans)glycosidases Glycosyl hydrolase domain 44
PYP-like sensor domain (PAS domain) Homeodomain-like 44
Creatinase/prolidase N-terminal domain Creatinase/aminopeptidase 41
CheY-like CheY-like 44
Glutathione synthetase ATP-binding domain-like Rudiment single hybrid motif 42
IlvD/EDD N-terminal domain-like LeuD/IlvD-like 31
GAF domain-like Homeodomain-like 32
Nucleic acid-binding proteins RuvA domain 2-like 33
Single hybrid motif CoA-dependent acyltransferases 32
ValRS/IleRS/LeuRS editing domain Nucleotidylyl transferase 33
Phosphoglucomutase, first 3 domains Phosphoglucomutase, C-terminal domain 32
Putative DNA-binding domain CheY-like 31
Nucleotidyltransferase ACT-like 32
TrkA C-terminal domain-like TrkA C-terminal domain-like 32
Translation proteins EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 32
EspE N-terminal domain-like P-loop containing nucleoside triphosphate hydrolases 32
"Winged helix" DNA-binding domain GAF domain-like 31
6-phosphogluconate dehydrogenase C-terminal domain-like 6-phosphogluconate dehydrogenase C-terminal domain-like 33
PYP-like sensor domain (PAS domain) Methyl-accepting chemotaxis protein (MCP) signaling domain 31
HAMP domain-like EAL domain-like 32
TPR-like Nucleotide cyclase 32
PYP-like sensor domain (PAS domain) P-loop containing nucleoside triphosphate hydrolases 33
Phosphoglucomutase, first 3 domains Phosphoglucomutase, first 3 domains 32
"Winged helix" DNA-binding domain PLP-dependent transferases 31
LeuD/IlvD-like Aconitase iron-sulfur domain 32
Actin-like ATPase domain Heat shock protein 70kD (HSP70), peptide-binding domain 32
Sigma3 and sigma4 domains of RNA polymerase sigma factors Sigma3 and sigma4 domains of RNA polymerase sigma factors 32
6-phosphogluconate dehydrogenase C-terminal domain-like UDP-glucose/GDP-mannose dehydrogenase C-terminal domain 32
P-loop containing nucleoside triphosphate hydrolases Class I glutamine amidotransferase-like 31
Class II aaRS and biotin synthetases Class II aaRS ABD-related 33
Single hybrid motif Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex 32
Triger factor/SurA peptide-binding domain-like FKBP-like 33
N-terminal nucleophile aminohydrolases (Ntn hydrolases) Adenine nucleotide alpha hydrolases-like 31
NHL repeat Nucleotide cyclase 33
P-loop containing nucleoside triphosphate hydrolases EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 32
E set domains (Trans)glycosidases 33
Peptidase/esterase 'gauge' domain alpha/beta-Hydrolases 32
ValRS/IleRS/LeuRS editing domain Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 33
CheY-like EAL domain-like 33
EF-G C-terminal domain-like Ribosomal protein S5 domain 2-like 32
MurCD N-terminal domain MurD-like peptide ligases, catalytic domain 31
FMN-linked oxidoreductases FAD/NAD(P)-binding domain 33
NAD(P)-binding Rossmann-fold domains UDP-glucose/GDP-mannose dehydrogenase C-terminal domain 32
Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like 33
GAF domain-like P-loop containing nucleoside triphosphate hydrolases 32
Trypsin-like serine proteases PDZ domain-like 32
MurCD N-terminal domain MurD-like peptide ligases, peptide-binding domain 31
Translation proteins SH3-like domain Nucleic acid-binding proteins 32
Lysozyme-like beta-lactamase/transpeptidase-like 33
P-loop containing nucleoside triphosphate hydrolases "Winged helix" DNA-binding domain 33
P-loop containing nucleoside triphosphate hydrolases MOP-like 31
Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex CoA-dependent acyltransferases 32
P-loop containing nucleoside triphosphate hydrolases FtsH protease domain-like 32
MetI-like MetI-like 32
Nucleotidyltransferase Poly A polymerase C-terminal region-like 32
Composite domain of metallo-dependent hydrolases Composite domain of metallo-dependent hydrolases 31
P-loop containing nucleoside triphosphate hydrolases post-AAA+ oligomerization domain-like 33
FAD/NAD(P)-binding domain Aminomethyltransferase beta-barrel domain 21
TSP type-3 repeat TSP type-3 repeat 22
Calcium ATPase, transduction domain A HAD-like 22
PLP-dependent transferases PLP-dependent transferases 21
EAL domain-like HD-domain/PDEase-like 21
Nqo1 FMN-binding domain-like Nqo1 middle domain-like 21
2Fe-2S ferredoxin-like ADC-like 21
FAD/NAD(P)-binding domain Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain 22
PIN domain-like 5' to 3' exonuclease, C-terminal subdomain 22
2Fe-2S ferredoxin-like 4Fe-4S ferredoxins 21
ThrRS/AlaRS common domain Class II aaRS and biotin synthetases 22
OMPA-like OmpA-like 21
N-terminal domain of alpha and beta subunits of F1 ATP synthase P-loop containing nucleoside triphosphate hydrolases 21
Single hybrid motif Single hybrid motif 21
HlyD-like secretion proteins HlyD-like secretion proteins 21
Class I glutamine amidotransferase-like Homeodomain-like 21
Penicillin binding protein dimerisation domain beta-lactamase/transpeptidase-like 22
Galactose-binding domain-like PKD domain 21
Ribosomal protein S5 domain 2-like GHMP Kinase, C-terminal domain 21
P-loop containing nucleoside triphosphate hydrolases Restriction endonuclease-like 22
Multiheme cytochromes TPR-like 21
2Fe-2S ferredoxin-like Formate dehydrogenase/DMSO reductase, domains 1-3 21
NAD(P)-binding Rossmann-fold domains ACT-like 22
Thiolase-like FabD/lysophospholipase-like 22
Cytochrome c C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase 21
Phospholipase D/nuclease Phospholipase D/nuclease 21
GAF domain-like Homodimeric domain of signal transducing histidine kinase 22
Nitrite/Sulfite reductase N-terminal domain-like Nitrite and sulphite reductase 4Fe-4S domain-like 22
Metallo-hydrolase/oxidoreductase SCP-like 21
P-loop containing nucleoside triphosphate hydrolases Glucocorticoid receptor-like (DNA-binding domain) 22
Nucleotidyltransferase TGS-like 21
Galactose-binding domain-like Galactose-binding domain-like 22
FabD/lysophospholipase-like Probable ACP-binding domain of malonyl-CoA ACP transacylase 22
Calcium-dependent phosphotriesterase Calcium-dependent phosphotriesterase 22
Periplasmic binding protein-like II Periplasmic binding protein-like II 22
Adenine nucleotide alpha hydrolases-like DHS-like NAD/FAD-binding domain 21
HAMP domain-like CheY-like 22
Aconitase B, N-terminal domain Aconitase iron-sulfur domain 21
TGS-like ACT-like 21
CBS-domain pair FAD-binding/transporter-associated domain-like 21
HD-domain/PDEase-like TGS-like 21
E set domains Glycosyl hydrolase domain 22
FAD/NAD(P)-binding domain Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain 22
4Fe-4S ferredoxins Formate dehydrogenase/DMSO reductase, domains 1-3 21
Cadherin-like Cadherin-like 22
FMN-linked oxidoreductases Alpha subunit of glutamate synthase, C-terminal domain 22
HMA, heavy metal-associated domain Calcium ATPase, transmembrane domain M 22
Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain 22
GreA transcript cleavage protein, N-terminal domain FKBP-like 21
HAD-like Calcium ATPase, transmembrane domain M 22
Sensory domain-like Methyl-accepting chemotaxis protein (MCP) signaling domain 22
N-terminal nucleophile aminohydrolases (Ntn hydrolases) Alpha subunit of glutamate synthase, C-terminal domain 22
ClpP/crotonase 6-phosphogluconate dehydrogenase C-terminal domain-like 22
Zinc beta-ribbon Zinc beta-ribbon 22
Leukotriene A4 hydrolase N-terminal domain Metalloproteases ("zincins"), catalytic domain 22
HMA, heavy metal-associated domain Calcium ATPase, transduction domain A 22
CheY-like HD-domain/PDEase-like 21
Thioredoxin-like Nqo1 middle domain-like 21
FAD/NAD(P)-binding domain Folate-binding domain 21
Carbamate kinase-like NAD(P)-binding Rossmann-fold domains 22
Calcium ATPase, transduction domain A Calcium ATPase, transmembrane domain M 22
TPR-like HCP-like 21
Nucleotidyltransferase Nucleotidyltransferase substrate binding subunit/domain 22
FAD-binding/transporter-associated domain-like alpha-helical ferredoxin 22
Thioredoxin-like Nqo1C-terminal domain-like 21
Enolase N-terminal domain-like Enolase C-terminal domain-like 21
DNA ligase/mRNA capping enzyme, catalytic domain Nucleic acid-binding proteins 22
2Fe-2S ferredoxin-like CO dehydrogenase ISP C-domain like 22
RmlC-like cupins RmlC-like cupins 21
NAD(P)-binding Rossmann-fold domains TrkA C-terminal domain-like 22
Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain 22
Calcium-dependent phosphotriesterase Nucleotide cyclase 22
PilZ domain-like PilZ domain-like 21
TPR-like P-loop containing nucleoside triphosphate hydrolases 22
Aconitase B, N-terminal domain LeuD/IlvD-like 21
Invasin/intimin cell-adhesion fragments Invasin/intimin cell-adhesion fragments 22
E set domains E set domains 22
ClpP/crotonase NAD(P)-binding Rossmann-fold domains 22
N-terminal nucleophile aminohydrolases (Ntn hydrolases) FMN-linked oxidoreductases 22
NAD(P)-binding Rossmann-fold domains NAD(P)-binding Rossmann-fold domains 22
HD-domain/PDEase-like ACT-like 21
Ribosomal protein S5 domain 2-like Ribonuclease PH domain 2-like 22
PDZ domain-like PDZ domain-like 22
Carbamate kinase-like Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 22
Glutamine synthetase, N-terminal domain Glutamine synthetase/guanido kinase 21
Nqo1 FMN-binding domain-like Nqo1C-terminal domain-like 21
P-loop containing nucleoside triphosphate hydrolases C-terminal domain of alpha and beta subunits of F1 ATP synthase 21
Periplasmic binding protein-like II Lysozyme-like 22
GAF domain-like ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 22
NTF2-like NTF2-like 21
Translation proteins Ribosomal protein S5 domain 2-like 21
tRNA-binding arm Class II aaRS and biotin synthetases 21
Nucleic acid-binding proteins P-loop containing nucleoside triphosphate hydrolases 22
Phosphohistidine domain Phosphoenolpyruvate/pyruvate domain 22
beta-N-acetylhexosaminidase-like domain (Trans)glycosidases 22
Glutathione synthetase ATP-binding domain-like Glutathione synthetase ATP-binding domain-like 22
CheY-like Hemerythrin-like 22
Galactose mutarotase-like Six-hairpin glycosidases 21
Tubulin nucleotide-binding domain-like Tubulin C-terminal domain-like 22
MurE/MurF N-terminal domain MurD-like peptide ligases, catalytic domain 22
GAF domain-like GAF domain-like 21
ClpP/crotonase ClpP/crotonase 22
RmlC-like cupins Homeodomain-like 21
Ribonuclease H-like DNA/RNA polymerases 22
HAMP domain-like PYP-like sensor domain (PAS domain) 21
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase Type II DNA topoisomerase 22
MurE/MurF N-terminal domain MurD-like peptide ligases, peptide-binding domain 22
Adenine nucleotide alpha hydrolases-like Adenine nucleotide alpha hydrolases-like 21
Actin-like ATPase domain Heat shock protein 70kD (HSP70), C-terminal subdomain 21
Type II DNA topoisomerase GyrA/ParC C-terminal domain-like 22
"Winged helix" DNA-binding domain C-terminal domain of arginine repressor 21
4Fe-4S ferredoxins ADC-like 21
alpha-helical ferredoxin Nucleotide-binding domain 22
Heat shock protein 70kD (HSP70), peptide-binding domain Heat shock protein 70kD (HSP70), C-terminal subdomain 21
TPR-like CheY-like 22
HMA, heavy metal-associated domain HAD-like 22
Thioesterase/thiol ester dehydrase-isomerase Thioesterase/thiol ester dehydrase-isomerase 22
FAD-linked oxidases, C-terminal domain alpha-helical ferredoxin 22
PA domain Subtilisin-like 22
HD-domain/PDEase-like Nucleotidyltransferase 21
Double Clp-N motif P-loop containing nucleoside triphosphate hydrolases 22
Nqo1 middle domain-like Nqo1C-terminal domain-like 21
Thioredoxin-like Nqo1 FMN-binding domain-like 21
Carbamate kinase-like ACT-like 22
Methylated DNA-protein cysteine methyltransferase domain Methylated DNA-protein cysteine methyltransferase, C-terminal domain 22
N-terminal domain of alpha and beta subunits of F1 ATP synthase C-terminal domain of alpha and beta subunits of F1 ATP synthase 21
Hemerythrin-like Nucleotide cyclase 22
Ribosomal protein S5 domain 2-like Type II DNA topoisomerase 22
Cation efflux protein transmembrane domain-like Cation efflux protein cytoplasmic domain-like 11
FMN-binding split barrel 2Fe-2S ferredoxin-like 11
PurS-like FGAM synthase PurL, linker domain 11
Molybdenum cofactor-binding domain Molybdenum cofactor-binding domain 11
MFS general substrate transporter MFS general substrate transporter 11
LysM domain LysM domain 11
Carbamoyl phosphate synthetase, large subunit connection domain Methylglyoxal synthase-like 11
Transcription factor NusA, N-terminal domain Rad51 N-terminal domain-like 11
Hsp33 domain HSP33 redox switch-like 11
Ribokinase-like Thiamin phosphate synthase 11
Glutathione synthetase ATP-binding domain-like MurD-like peptide ligases, peptide-binding domain 11
UDP-Glycosyltransferase/glycogen phosphorylase NAD(P)-binding Rossmann-fold domains 11
Thioredoxin-like FAD/NAD(P)-binding domain 11
Toll/Interleukin receptor TIR domain HCP-like 11
NusB-like S-adenosyl-L-methionine-dependent methyltransferases 11
DnaJ/Hsp40 cysteine-rich domain HSP40/DnaJ peptide-binding domain 11
Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 11
THUMP domain-like Adenine nucleotide alpha hydrolases-like 11
Class II aaRS and biotin synthetases Anticodon-binding domain of PheRS 11
YhbC-like, N-terminal domain YhbC-like, C-terminal domain 11
Nitrite/Sulfite reductase N-terminal domain-like Nitrite/Sulfite reductase N-terminal domain-like 11
FGAM synthase PurL, linker domain PurM C-terminal domain-like 11
Nucleotide-binding domain Nucleotide-binding domain 11
Zinc beta-ribbon DNA primase DnaG, C-terminal domain 11
Homocysteine S-methyltransferase Cobalamin (vitamin B12)-binding domain 11
UDP-Glycosyltransferase/glycogen phosphorylase UDP-glucose/GDP-mannose dehydrogenase C-terminal domain 11
Metalloproteases ("zincins"), catalytic domain beta-Roll 11
Putative DNA-binding domain Initiation factor IF2/eIF5b, domain 3 11
DPP6 N-terminal domain-like Composite domain of metallo-dependent hydrolases 11
NAD(P)-binding Rossmann-fold domains LDH C-terminal domain-like 11
THUMP domain-like Rhodanese/Cell cycle control phosphatase 11
Class II aaRS and biotin synthetases C-terminal domain of transcriptional repressors 11
Insert subdomain of RNA polymerase alpha subunit C-terminal domain of RNA polymerase alpha subunit 11
Pseudouridine synthase PUA domain-like 11
RuvA domain 2-like DNA helicase RuvA subunit, C-terminal domain 11
PLP-dependent transferases Metallo-hydrolase/oxidoreductase 11
PH0987 N-terminal domain-like Cyclophilin-like 11
Homocysteine S-methyltransferase Dihydropteroate synthetase-like 11
DNA repair protein MutS, domain I P-loop containing nucleoside triphosphate hydrolases 11
N-utilization substance G protein NusG, N-terminal domain Translation proteins SH3-like domain 11
FAD-linked reductases, C-terminal domain 4Fe-4S ferredoxins 11
TGS-like ThrRS/AlaRS common domain 11
Cobalamin (vitamin B12)-binding domain Methionine synthase activation domain-like 11
Cobalamin (vitamin B12)-binding domain Radical SAM enzymes 11
NAD(P)-binding Rossmann-fold domains Tetrapyrrole methylase 11
TPR-like TolA/TonB C-terminal domain 11
C-terminal effector domain of the bipartite response regulators Tricorn protease N-terminal domain 11
Glycerol-3-phosphate (1)-acyltransferase Acyl-CoA N-acyltransferases (Nat) 11
TPR-like LysM domain 11
P-loop containing nucleoside triphosphate hydrolases C-terminal UvrC-binding domain of UvrB 11
TolB, N-terminal domain Tricorn protease N-terminal domain 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) SIS domain 11
Homeodomain-like Methylated DNA-protein cysteine methyltransferase, C-terminal domain 11
FKBP-like FKBP-like 11
Aldolase Single hybrid motif 11
Glutamyl tRNA-reductase catalytic, N-terminal domain Glutamyl tRNA-reductase dimerization domain 11
PK beta-barrel domain-like 2Fe-2S ferredoxin-like 11
Nucleotidylyl transferase Ribosomal protein L25-like 11
P-loop containing nucleoside triphosphate hydrolases Acyl-CoA N-acyltransferases (Nat) 11
PK beta-barrel domain-like PK C-terminal domain-like 11
alpha/beta-Hydrolases Galactose-binding domain-like 11
CheC-like Surface presentation of antigens (SPOA) 11
CBS-domain pair EAL domain-like 11
"Winged helix" DNA-binding domain HRDC-like 11
Quinoprotein alcohol dehydrogenase-like Nucleotide cyclase 11
DPP6 N-terminal domain-like Tricorn protease N-terminal domain 11
PHP domain-like P-loop containing nucleoside triphosphate hydrolases 11
PA domain Zn-dependent exopeptidases 11
Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain Phosphoenolpyruvate/pyruvate domain 11
Dihydropteroate synthetase-like Cobalamin (vitamin B12)-binding domain 11
Molybdenum cofactor biosynthesis proteins CinA-like 11
FAD-binding/transporter-associated domain-like Uridine diphospho-N-Acetylenolpyruvylglucosamine reductase, MurB, C-terminal domain 11
Periplasmic binding protein-like II OmpA-like 11
Methionyl-tRNA synthetase (MetRS), Zn-domain Nucleic acid-binding proteins 11
HSP40/DnaJ peptide-binding domain HSP40/DnaJ peptide-binding domain 11
Acyl-CoA N-acyltransferases (Nat) Thioesterase/thiol ester dehydrase-isomerase 11
N-terminal domain of DnaB helicase P-loop containing nucleoside triphosphate hydrolases 11
YbaK/ProRS associated domain Class II aaRS ABD-related 11
N-terminal domain of MutM-like DNA repair proteins S13-like H2TH domain 11
Nucleotidyltransferase Nucleotidyltransferase 11
P-loop containing nucleoside triphosphate hydrolases TGS-like 11
Aldolase 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain 11
TK C-terminal domain-like Pyruvate-ferredoxin oxidoreductase, PFOR, domain III 11
Glutathione synthetase ATP-binding domain-like Phosphoenolpyruvate/pyruvate domain 11
P-loop containing nucleoside triphosphate hydrolases Isocitrate/Isopropylmalate dehydrogenase-like 11
Cyclophilin-like TSP type-3 repeat 11
P-loop containing nucleoside triphosphate hydrolases Initiation factor IF2/eIF5b, domain 3 11
Probable ACP-binding domain of malonyl-CoA ACP transacylase NAD(P)-binding Rossmann-fold domains 11
Ribonuclease PH domain 2-like Ribonuclease PH domain 2-like 11
Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases tRNA-binding arm 11
Nitrite and sulphite reductase 4Fe-4S domain-like Nitrite and sulphite reductase 4Fe-4S domain-like 11
P-loop containing nucleoside triphosphate hydrolases HprK N-terminal domain-like 11
Ferritin-like Multiheme cytochromes 11
CO dehydrogenase ISP C-domain like CO dehydrogenase flavoprotein C-terminal domain-like 11
Glutathione synthetase ATP-binding domain-like Phosphohistidine domain 11
DNA-glycosylase Nudix 11
GspK insert domain-like GspK insert domain-like 11
Nucleotidylyl transferase Riboflavin kinase-like 11
Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain Phosphohistidine domain 11
Transcription factor NusA, N-terminal domain Prokaryotic type KH domain (KH-domain type II) 11
P-loop containing nucleoside triphosphate hydrolases RecA protein, C-terminal domain 11
PYP-like sensor domain (PAS domain) Histidine-containing phosphotransfer domain, HPT domain 11
NTF2-like Isochorismatase-like hydrolases 11
Globin-like Ferredoxin reductase-like, C-terminal NADP-linked domain 11
Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain Nucleotidylyl transferase 11
DPP6 N-terminal domain-like PYP-like sensor domain (PAS domain) 11
ACT-like PYP-like sensor domain (PAS domain) 11
C-terminal UvrC-binding domain of UvrB RuvA domain 2-like 11
Adenine nucleotide alpha hydrolases-like Argininosuccinate synthetase, C-terminal domain 11
HAMP domain-like Histidine-containing phosphotransfer domain, HPT domain 11
Ribosomal protein L6 Ribosomal protein L6 11
Ribonuclease PH domain 2-like Eukaryotic type KH-domain (KH-domain type I) 11
Starch-binding domain-like Glycosyl hydrolase domain 11
FliG FliG 11
Homocysteine S-methyltransferase Methionine synthase domain 11
Bacterial muramidases Lysozyme-like 11
Probable ACP-binding domain of malonyl-CoA ACP transacylase ACP-like 11
all-alpha NTP pyrophosphatases all-alpha NTP pyrophosphatases 11
CBS-domain pair MgtE membrane domain-like 11
Transmembrane di-heme cytochromes a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) 11
GAF domain-like Phosphohistidine domain 11
HisI-like all-alpha NTP pyrophosphatases 11
beta-lactamase/transpeptidase-like Penicillin-binding protein associated domain 11
FAD-binding/transporter-associated domain-like CO dehydrogenase flavoprotein C-terminal domain-like 11
Flavoproteins Riboflavin synthase domain-like 11
HAD-like Ribosomal protein S5 domain 2-like 11
Ribbon-helix-helix Replication modulator SeqA, C-terminal DNA-binding domain 11
Nucleic acid-binding proteins S-adenosyl-L-methionine-dependent methyltransferases 11
"Winged helix" DNA-binding domain C-terminal domain of transcriptional repressors 11
"Winged helix" DNA-binding domain Chorismate lyase-like 11
Hemerythrin-like HAMP domain-like 11
Domain of the SRP/SRP receptor G-proteins P-loop containing nucleoside triphosphate hydrolases 11
Dihydropteroate synthetase-like Methionine synthase activation domain-like 11
Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 11
Putative DNA-binding domain Class II aaRS and biotin synthetases 11
Methylglyoxal synthase-like Cytidine deaminase-like 11
PDZ domain-like ClpP/crotonase 11
CBS-domain pair Nucleotide cyclase 11
Glutathione synthetase ATP-binding domain-like MurD-like peptide ligases, catalytic domain 11
Ribosomal protein S5 domain 2-like HSP90 C-terminal domain 11
Tex N-terminal region-like Ribonuclease H-like 11
NagB/RpiA/CoA transferase-like Acyl-CoA N-acyltransferases (Nat) 11
PreATP-grasp domain Single hybrid motif 11
NAD(P)-binding Rossmann-fold domains Glutamyl tRNA-reductase dimerization domain 11
TGS-like Class II aaRS and biotin synthetases 11
YrdC/RibB RibA-like 11
DPP6 N-terminal domain-like Metallo-dependent hydrolases 11
DeoB insert domain-like Alkaline phosphatase-like 11
Concanavalin A-like lectins/glucanases Concanavalin A-like lectins/glucanases 11
PheT/TilS domain Class II aaRS and biotin synthetases 11
Thiolase-like NAD(P)-binding Rossmann-fold domains 11
Tricorn protease domain 2 Nucleotide cyclase 11
Homodimeric domain of signal transducing histidine kinase Homeodomain-like 11
Peptide methionine sulfoxide reductase Mss4-like 11
LysM domain L,D-transpeptidase catalytic domain-like 11
FAD-linked oxidoreductase ALDH-like 11
YajQ-like YajQ-like 11
PUA domain-like S-adenosyl-L-methionine-dependent methyltransferases 11
UDP-Glycosyltransferase/glycogen phosphorylase 6-phosphogluconate dehydrogenase C-terminal domain-like 11
Phosphoenolpyruvate/pyruvate domain PK C-terminal domain-like 11
Chaperone J-domain HSP40/DnaJ peptide-binding domain 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) PRTase-like 11
Eukaryotic type KH-domain (KH-domain type I) Nucleic acid-binding proteins 11
Ribonuclease H-like RuvA domain 2-like 11
HD-domain/PDEase-like GAF domain-like 11
C-terminal effector domain of the bipartite response regulators DPP6 N-terminal domain-like 11
Galactose mutarotase-like Glycosyl hydrolase domain 11
Epsilon subunit of F1F0-ATP synthase N-terminal domain Epsilon subunit of F1F0-ATP synthase C-terminal domain 11
DNA repair protein MutS, domain III P-loop containing nucleoside triphosphate hydrolases 11
Periplasmic binding protein-like II Nucleotide cyclase 11
CarD-like TRCF domain-like 11
TPR-like ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 11
PP2C-like Protein kinase-like (PK-like) 11
Obg GTP-binding protein N-terminal domain P-loop containing nucleoside triphosphate hydrolases 11
Thiamin diphosphate-binding fold (THDP-binding) Pyruvate-ferredoxin oxidoreductase, PFOR, domain III 11
DPP6 N-terminal domain-like Nucleotide cyclase 11
Glutathione synthetase ATP-binding domain-like Carbamoyl phosphate synthetase, large subunit connection domain 11
FAD/NAD(P)-binding domain HI0933 insert domain-like 11
NHL repeat Tricorn protease domain 2 11
Zn-dependent exopeptidases Class I glutamine amidotransferase-like 11
Periplasmic binding protein-like II PYP-like sensor domain (PAS domain) 11
Galactose mutarotase-like (Trans)glycosidases 11
"Winged helix" DNA-binding domain Class II aaRS and biotin synthetases 11
Adenine nucleotide alpha hydrolases-like GMP synthetase C-terminal dimerisation domain 11
Flavoproteins Ferredoxin reductase-like, C-terminal NADP-linked domain 11
ACP-like ACP-like 11
Translation proteins Initiation factor IF2/eIF5b, domain 3 11
Homo-oligomeric flavin-containing Cys decarboxylases, HFCD CoaB-like 11
Rudiment single hybrid motif Single hybrid motif 11
Enolase C-terminal domain-like Nitrite and sulphite reductase 4Fe-4S domain-like 11
Nucleotidylyl transferase An anticodon-binding domain of class I aminoacyl-tRNA synthetases 11
Nucleic acid-binding proteins Anticodon-binding domain of PheRS 11
FMN-binding split barrel UbiD C-terminal domain-like 11
Nucleic acid-binding proteins Rad51 N-terminal domain-like 11
S-adenosyl-L-methionine-dependent methyltransferases NAD(P)-binding Rossmann-fold domains 11
Barwin-like endoglucanases Sporulation related repeat 11
(Trans)glycosidases Galactose-binding domain-like 11
Protein kinase-like (PK-like) HCP-like 11
Phospholipase D/nuclease P-loop containing nucleoside triphosphate hydrolases 11
UBA-like Elongation factor Ts (EF-Ts), dimerisation domain 11
CheW-like CheY-like 11
P-loop containing nucleoside triphosphate hydrolases HRDC-like 11
NagB/RpiA/CoA transferase-like NagB/RpiA/CoA transferase-like 11
FAS1 domain FAS1 domain 11
Cytochrome c oxidase subunit II-like, transmembrane region Cupredoxins 11
MgtE N-terminal domain-like MgtE membrane domain-like 11
4'-phosphopantetheinyl transferase 4'-phosphopantetheinyl transferase 11
Cupredoxins Cytochrome c 11
Carbon-nitrogen hydrolase Carbon-nitrogen hydrolase 11
alpha/beta-Hydrolases ClpP/crotonase 11
Nucleic acid-binding proteins DNA helicase RuvA subunit, C-terminal domain 11
ThrRS/AlaRS common domain Class II aaRS ABD-related 11
Carbamate kinase-like PUA domain-like 11
Metalloproteases ("zincins"), catalytic domain ARM repeat 11
Cytidine deaminase-like Dihydrofolate reductase-like 11
NagB/RpiA/CoA transferase-like D-ribose-5-phosphate isomerase (RpiA), lid domain 11
CO dehydrogenase ISP C-domain like FAD-binding/transporter-associated domain-like 11
Quinoprotein alcohol dehydrogenase-like NHL repeat 11
Tricorn protease domain 2 EAL domain-like 11
RuvA domain 2-like BRCT domain 11
Nucleotidyltransferase substrate binding subunit/domain Nucleotidyltransferase substrate binding subunit/domain 11
CheY-like CheC-like 11
DsbC/DsbG N-terminal domain-like Thioredoxin-like 11
Putative DNA-binding domain LexA/Signal peptidase 11
Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain Pyrimidine nucleoside phosphorylase C-terminal domain 11
Aldolase post-HMGL domain-like 11
Histidine-containing phosphotransfer domain, HPT domain CheW-like 11
Nucleic acid-binding proteins Putative DNA-binding domain 11
Nitrous oxide reductase, N-terminal domain YVTN repeat-like/Quinoprotein amine dehydrogenase 11
CheY-like Methylesterase CheB, C-terminal domain 11
ACT-like Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 11
Chorismate mutase II NAD(P)-binding Rossmann-fold domains 11
Galactose-binding domain-like Concanavalin A-like lectins/glucanases 11
Class II aaRS and biotin synthetases Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) 11
P-loop containing nucleoside triphosphate hydrolases CarD-like 11
Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain Pyrimidine nucleoside phosphorylase C-terminal domain 11
PurM N-terminal domain-like Class I glutamine amidotransferase-like 11
Translation proteins ThrRS/AlaRS common domain 11
Riboflavin synthase domain-like Riboflavin synthase domain-like 11
Aspartate/glutamate racemase Aspartate/glutamate racemase 11
Sensory domain-like ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 11
S-adenosyl-L-methionine-dependent methyltransferases Putative methyltransferase TM0872, insert domain 11
FMN-binding split barrel Riboflavin synthase domain-like 11
P-loop containing nucleoside triphosphate hydrolases Prokaryotic type KH domain (KH-domain type II) 11
Glutathione synthetase ATP-binding domain-like Methylglyoxal synthase-like 11
ALDH-like ALDH-like 11
PurS-like PurM N-terminal domain-like 11
Class II aaRS and biotin synthetases GAD domain-like 11
Zn-dependent exopeptidases LysM domain 11
Nucleotide-diphospho-sugar transferases Trimeric LpxA-like enzymes 11
ACT-like Homeodomain-like 11
FAD/NAD(P)-binding domain Nitrite/Sulfite reductase N-terminal domain-like 11
YjeF N-terminal domain-like Ribokinase-like 11
DPP6 N-terminal domain-like NHL repeat 11
C-type lectin-like S-adenosyl-L-methionine-dependent methyltransferases 11
PheT/TilS domain Anticodon-binding domain of PheRS 11
Nucleic acid-binding proteins BRCT domain 11
Thiolase-like Probable ACP-binding domain of malonyl-CoA ACP transacylase 11
Prokaryotic type KH domain (KH-domain type II) Prokaryotic type KH domain (KH-domain type II) 11
DNA primase core DNA primase DnaG, C-terminal domain 11
ISP domain Bet v1-like 11
L domain-like Protein kinase-like (PK-like) 11
Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases Nucleic acid-binding proteins 11
alpha/beta-Hydrolases TPR-like 11
Tetrahydrobiopterin biosynthesis enzymes-like Tetrahydrobiopterin biosynthesis enzymes-like 11
CBS-domain pair Inosine monophosphate dehydrogenase (IMPDH) 11
PIN domain-like Ribonuclease H-like 11
Adenine nucleotide alpha hydrolases-like MesJ substrate recognition domain-like 11
Tricorn protease domain 2 PYP-like sensor domain (PAS domain) 11
GroES-like GroES-like 11
Lysozyme-like LysM domain 11
Phosphotyrosine protein phosphatases I "Winged helix" DNA-binding domain 11
FMN-linked oxidoreductases Nucleotide-binding domain 11
Methionyl-tRNA synthetase (MetRS), Zn-domain Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 11
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase Hemerythrin-like 11
Rho N-terminal domain-like P-loop containing nucleoside triphosphate hydrolases 11
2Fe-2S ferredoxin-like FAD-binding/transporter-associated domain-like 11
MesJ substrate recognition domain-like PheT/TilS domain 11
FGAM synthase PurL, linker domain PurM N-terminal domain-like 11
dsRNA-binding domain-like Ribosomal protein S5 domain 2-like 11
Peptide methionine sulfoxide reductase Thioredoxin-like 11
Chorismate mutase II ACT-like 11
PurS-like Class I glutamine amidotransferase-like 11
Tricorn protease N-terminal domain alpha/beta-Hydrolases 11
Coiled-coil domain of nucleotide exchange factor GrpE Head domain of nucleotide exchange factor GrpE 11
GIY-YIG endonuclease RuvA domain 2-like 11
Carbamoyl phosphate synthetase, small subunit N-terminal domain Class I glutamine amidotransferase-like 11
HMA, heavy metal-associated domain HMA, heavy metal-associated domain 11
Adenine nucleotide alpha hydrolases-like PheT/TilS domain 11
PUA domain-like Ribosomal protein S5 domain 2-like 11
HRDC-like HRDC-like 11
TGS-like Class II aaRS ABD-related 11
Globin-like Riboflavin synthase domain-like 11
Prokaryotic type KH domain (KH-domain type II) Ribosomal protein S3 C-terminal domain 11
NHL repeat EAL domain-like 11
CBS-domain pair CBS-domain pair 11
Thioredoxin-like Mss4-like 11
DHS-like NAD/FAD-binding domain TPR-like 11
Putative DNA-binding domain P-loop containing nucleoside triphosphate hydrolases 11
alpha/beta-Hydrolases alpha/beta-Hydrolases 11
Leukotriene A4 hydrolase N-terminal domain ARM repeat 11
Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 1-deoxy-D-xylulose-5-phosphate reductoisomerase, C-terminal domain 11
Cytochrome c oxidase subunit II-like, transmembrane region Cytochrome c 11
ClpP/crotonase NfeD domain-like 11
Periplasmic binding protein-like II ACT-like 11
Macro domain-like Zn-dependent exopeptidases 11
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase Homeodomain-like 11
Ribonuclease H-like HRDC-like 11
5' to 3' exonuclease, C-terminal subdomain DNA/RNA polymerases 11
Nucleotidylyl transferase Nucleic acid-binding proteins 11
Starch-binding domain-like (Trans)glycosidases 11
Carbohydrate-binding domain E set domains 11
Glutathione synthetase ATP-binding domain-like Single hybrid motif 11
Nucleic acid-binding proteins Prokaryotic type KH domain (KH-domain type II) 11
TPR-like Histidine-containing phosphotransfer domain, HPT domain 11
Nucleotidyltransferase substrate binding subunit/domain ACT-like 11
PIN domain-like P-loop containing nucleoside triphosphate hydrolases 11
P-loop containing nucleoside triphosphate hydrolases Helical scaffold and wing domains of SecA 11
Nucleotidyltransferase substrate binding subunit/domain Poly A polymerase C-terminal region-like 11
CBS-domain pair PYP-like sensor domain (PAS domain) 11
Chorismate mutase II 6-phosphogluconate dehydrogenase C-terminal domain-like 11
Metalloproteases ("zincins"), catalytic domain PDZ domain-like 11
Diaminopimelate epimerase-like Diaminopimelate epimerase-like 11
Homodimeric domain of signal transducing histidine kinase Hemerythrin-like 11
Trigger factor ribosome-binding domain FKBP-like 11
N-terminal domain of bifunctional PutA protein FAD-linked oxidoreductase 11
Dihydropteroate synthetase-like Methionine synthase domain 11
PK beta-barrel domain-like Phosphoenolpyruvate/pyruvate domain 11
PurS-like PurM C-terminal domain-like 11
Tex N-terminal region-like Nucleic acid-binding proteins 11
Periplasmic binding protein-like II ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 11
DPP6 N-terminal domain-like Tricorn protease domain 2 11
Nucleotidylyl transferase Alpha-L RNA-binding motif 11
PEP carboxykinase N-terminal domain PEP carboxykinase-like 11
Periplasmic binding protein-like II GlnB-like 11
PLP-dependent transferases Rhodanese/Cell cycle control phosphatase 11
GroEL equatorial domain-like GroEL apical domain-like 11
DNA repair protein MutS, domain I DNA repair protein MutS, domain II 11
Starch-binding domain-like Porins 11
Heme-dependent peroxidases Heme-dependent peroxidases 11
L domain-like L domain-like 11
Prokaryotic type I DNA topoisomerase Zinc beta-ribbon 11
Carbamate kinase-like Acyl-CoA N-acyltransferases (Nat) 11
Thiolase-like Thioesterase/thiol ester dehydrase-isomerase 11
cAMP-binding domain-like CBS-domain pair 11
L9 N-domain-like Ribonuclease H-like 11
P-loop containing nucleoside triphosphate hydrolases Signal peptide-binding domain 11
Chorismate mutase II Periplasmic binding protein-like II 11
TSP type-3 repeat Concanavalin A-like lectins/glucanases 11
Thioredoxin-like TPR-like 11
Sensory domain-like Homodimeric domain of signal transducing histidine kinase 11
Homodimeric domain of signal transducing histidine kinase CheW-like 11
FAD/NAD(P)-binding domain FAD/NAD(P)-binding domain 11
Trypsin-like serine proteases PKD domain 11
Tex N-terminal region-like RuvA domain 2-like 11
Ribonuclease H-like Nucleic acid-binding proteins 11
ACP-like NAD(P)-binding Rossmann-fold domains 11
His-Me finger endonucleases DNase I-like 11
Pre-protein crosslinking domain of SecA Helical scaffold and wing domains of SecA 11
P-loop containing nucleoside triphosphate hydrolases TRCF domain-like 11
Class I glutamine amidotransferase-like Adenine nucleotide alpha hydrolases-like 11
vWA-like TPR-like 11
DPP6 N-terminal domain-like EAL domain-like 11
Fe,Mn superoxide dismutase (SOD), N-terminal domain Fe,Mn superoxide dismutase (SOD), C-terminal domain 11
Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) ThrRS/AlaRS common domain 11
Pili subunits GspK insert domain-like 11
Ribosomal L11/L12e N-terminal domain Ribosomal protein L11, C-terminal domain 11
Class I glutamine amidotransferase-like GMP synthetase C-terminal dimerisation domain 11
TrmE connector domain P-loop containing nucleoside triphosphate hydrolases 11
DnaK suppressor protein DksA, alpha-hairpin domain Glucocorticoid receptor-like (DNA-binding domain) 11
Zinc beta-ribbon Prokaryotic SH3-related domain 11
TSP type-3 repeat Galactose-binding domain-like 11
Methionyl-tRNA synthetase (MetRS), Zn-domain Nucleotidylyl transferase 11
2,3-Bisphosphoglycerate-independent phosphoglycerate mutase, substrate-binding domain Alkaline phosphatase-like 11
Elongation factor Ts (EF-Ts), dimerisation domain Elongation factor Ts (EF-Ts), dimerisation domain 11
Protease propeptides/inhibitors Subtilisin-like 11
PurM N-terminal domain-like PurM N-terminal domain-like 11
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase CheW-like 11
Starch-binding domain-like E set domains 11
P-loop containing nucleoside triphosphate hydrolases TrpR-like 11
PIN domain-like DNA/RNA polymerases 11
HprK N-terminal domain-like Isocitrate/Isopropylmalate dehydrogenase-like 11
RBP11-like subunits of RNA polymerase C-terminal domain of RNA polymerase alpha subunit 11
beta-N-acetylhexosaminidase-like domain E set domains 11
FabD/lysophospholipase-like NAD(P)-binding Rossmann-fold domains 11
Trigger factor ribosome-binding domain Triger factor/SurA peptide-binding domain-like 11
Nucleotide-diphospho-sugar transferases RmlC-like cupins 11
CO dehydrogenase molybdoprotein N-domain-like Molybdenum cofactor-binding domain 11
Translation initiation factor IF3, N-terminal domain Translation initiation factor IF3, C-terminal domain 11
Aldolase AFP III-like domain 11
GAF domain-like Phosphoenolpyruvate/pyruvate domain 11
Zinc beta-ribbon DNA primase core 11
Ribonuclease PH domain 2-like Nucleic acid-binding proteins 11
Homeodomain-like Methylated DNA-protein cysteine methyltransferase domain 11
Siroheme synthase middle domains-like Tetrapyrrole methylase 11
PheT/TilS domain Putative DNA-binding domain 11
Carbohydrate-binding domain beta-N-acetylhexosaminidase-like domain 11
GAF domain-like Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain 11
(Trans)glycosidases Cadherin-like 11
Poly A polymerase C-terminal region-like ACT-like 11
ValRS/IleRS/LeuRS editing domain tRNA-binding arm 11
Methionine synthase domain Methionine synthase activation domain-like 11
S13-like H2TH domain Glucocorticoid receptor-like (DNA-binding domain) 11
Ribulose-phoshate binding barrel Ribulose-phoshate binding barrel 11
Carbohydrate-binding domain (Trans)glycosidases 11
GIY-YIG endonuclease C-terminal UvrC-binding domain of UvrB 11
"Winged helix" DNA-binding domain LexA/Signal peptidase 11
Nucleic acid-binding proteins GAD domain-like 11
MgtE N-terminal domain-like CBS-domain pair 11
TPR-like Homodimeric domain of signal transducing histidine kinase 11
FabD/lysophospholipase-like ACP-like 11
S-adenosylmethionine synthetase S-adenosylmethionine synthetase 11
ACT-like P-loop containing nucleoside triphosphate hydrolases 11
Formate/glycerate dehydrogenase catalytic domain-like ACT-like 11
MoeA N-terminal region -like Molybdenum cofactor biosynthesis proteins 11
Carboxypeptidase regulatory domain-like Metallo-dependent phosphatases 11
RNase III domain-like dsRNA-binding domain-like 11
PreATP-grasp domain Carbamoyl phosphate synthetase, large subunit connection domain 11
Calcium-dependent phosphotriesterase NHL repeat 11
Chemotaxis receptor methyltransferase CheR, N-terminal domain S-adenosyl-L-methionine-dependent methyltransferases 11
N-terminal domain of MutM-like DNA repair proteins Glucocorticoid receptor-like (DNA-binding domain) 11
N-terminal domain of bifunctional PutA protein ALDH-like 11
Periplasmic binding protein-like II CheY-like 11
DNA ligase/mRNA capping enzyme, catalytic domain BRCT domain 11
Glutathione synthetase ATP-binding domain-like Succinyl-CoA synthetase domains 11
RuvA domain 2-like RuvA domain 2-like 11
Glutamyl tRNA-reductase catalytic, N-terminal domain NAD(P)-binding Rossmann-fold domains 11
Ribosomal protein S5 domain 2-like DNA mismatch repair protein MutL 11
Metalloproteases ("zincins"), catalytic domain PKD domain 11
FAD/NAD(P)-binding domain 4Fe-4S ferredoxins 11
GroEL-intermediate domain like GroEL apical domain-like 11
PGBD-like Cysteine proteinases 11
Alanine racemase C-terminal domain-like Acetyl-CoA synthetase-like 11
L9 N-domain-like Ribosomal protein L9 C-domain 11
Translation proteins Translation proteins 11
Class II aaRS and biotin synthetases Translation proteins 11
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase DNA mismatch repair protein MutL 11
Tryptophan synthase beta subunit-like PLP-dependent enzymes ACT-like 11
Metallo-hydrolase/oxidoreductase Rhodanese/Cell cycle control phosphatase 11
Transcription factor NusA, N-terminal domain Nucleic acid-binding proteins 11
PA domain Trypsin-like serine proteases 11
Periplasmic binding protein-like II Homodimeric domain of signal transducing histidine kinase 11
Methionine synthase domain Cobalamin (vitamin B12)-binding domain 11
FGAM synthase PurL, linker domain Class I glutamine amidotransferase-like 11
DNA repair protein MutS, domain I DNA repair protein MutS, domain III 11
GAF domain-like CheY-like 11
Ribosomal protein S5 domain 2-like Eukaryotic type KH-domain (KH-domain type I) 11
Periplasmic binding protein-like II Histidine-containing phosphotransfer domain, HPT domain 11
Homeodomain-like SIS domain 11
Thiolase-like ACP-like 11
WD40 repeat-like MetI-like 11
DNA clamp DNA clamp 11
Ribosomal protein L7/12, oligomerisation (N-terminal) domain ClpS-like 11
L-aspartase-like Acyl-CoA N-acyltransferases (Nat) 11
Insert subdomain of RNA polymerase alpha subunit RBP11-like subunits of RNA polymerase 11
Putative DNA-binding domain Translation proteins 11
Proton glutamate symport protein Periplasmic binding protein-like II 11
Translation proteins PRC-barrel domain 11
Class II aaRS and biotin synthetases YbaK/ProRS associated domain 11
PUA domain-like alpha/beta knot 11
DPP6 N-terminal domain-like DPP6 N-terminal domain-like 11
NAD(P)-binding Rossmann-fold domains Siroheme synthase middle domains-like 11
EAL domain-like Sensory domain-like 11
5' to 3' exonuclease, C-terminal subdomain Ribonuclease H-like 11
PLP-dependent transferases SufE/NifU 11
PUA domain-like P-loop containing nucleoside triphosphate hydrolases 11
Formyltransferase FMT C-terminal domain-like 11
Nucleotidylyl transferase tRNA-binding arm 11
DNA ligase/mRNA capping enzyme, catalytic domain RuvA domain 2-like 11
PK beta-barrel domain-like Ferredoxin reductase-like, C-terminal NADP-linked domain 11
Thiol:disulfide interchange protein DsbD, N-terminal domain (DsbD-alpha) Thioredoxin-like 11
TSP type-3 repeat CalX-like 11
Nqo1 FMN-binding domain-like alpha-helical ferredoxin 11
Oxidoreductase molybdopterin-binding domain E set domains 11
2Fe-2S ferredoxin-like CO dehydrogenase flavoprotein C-terminal domain-like 11
DNA repair protein MutS, domain II P-loop containing nucleoside triphosphate hydrolases 11
2Fe-2S ferredoxin-like alpha-helical ferredoxin 11
PurM C-terminal domain-like Class I glutamine amidotransferase-like 11
"Winged helix" DNA-binding domain NagB/RpiA/CoA transferase-like 11
PreATP-grasp domain PreATP-grasp domain 11
NAD(P)-binding Rossmann-fold domains Succinyl-CoA synthetase domains 11
PurM C-terminal domain-like PurM C-terminal domain-like 11
P-loop containing nucleoside triphosphate hydrolases Pre-protein crosslinking domain of SecA 11
Molybdenum cofactor biosynthesis proteins MoeA C-terminal domain-like 11
DNA repair protein MutS, domain II DNA repair protein MutS, domain III 11
beta-N-acetylhexosaminidase-like domain Galactose-binding domain-like 11
CBD9-like Homodimeric domain of signal transducing histidine kinase 11
Lysozyme-like PGBD-like 11
R1 subunit of ribonucleotide reductase, N-terminal domain PFL-like glycyl radical enzymes 11
NHL repeat PYP-like sensor domain (PAS domain) 11
FAD/NAD(P)-binding domain Nitrite and sulphite reductase 4Fe-4S domain-like 11
"Winged helix" DNA-binding domain "Winged helix" DNA-binding domain 11
PYP-like sensor domain (PAS domain) Hemerythrin-like 11
GroEL equatorial domain-like GroEL-intermediate domain like 11
Rho N-terminal domain-like Nucleic acid-binding proteins 11
MoeA N-terminal region -like MoeA C-terminal domain-like 11
Composite domain of metallo-dependent hydrolases Porins 11
Nucleic acid-binding proteins PheT/TilS domain 11
DNA/RNA polymerases Lesion bypass DNA polymerase (Y-family), little finger domain 11
Chaperone J-domain HSC20 (HSCB), C-terminal oligomerisation domain 11
HesB-like domain Fe-S cluster assembly (FSCA) domain-like 11
Chaperone J-domain DnaJ/Hsp40 cysteine-rich domain 11
FMN-binding split barrel Ferredoxin reductase-like, C-terminal NADP-linked domain 11
Periplasmic binding protein-like II Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain 11
Nitrous oxide reductase, N-terminal domain Cupredoxins 11
Ribosomal protein S5 domain 2-like Nucleic acid-binding proteins 11
Nucleotide-binding domain FAD/NAD(P)-binding domain 11
Putative DNA-binding domain Anticodon-binding domain of PheRS 11
Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) Translation proteins 11
Rad51 N-terminal domain-like Rad51 N-terminal domain-like 11
CBD9-like ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 11
S-adenosyl-L-methionine-dependent methyltransferases S-adenosyl-L-methionine-dependent methyltransferases 11
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase HSP90 C-terminal domain 11
Nicotinate/Quinolinate PRTase N-terminal domain-like Nicotinate/Quinolinate PRTase C-terminal domain-like 11
NAD(P)-binding Rossmann-fold domains 1-deoxy-D-xylulose-5-phosphate reductoisomerase, C-terminal domain 11
PK beta-barrel domain-like Riboflavin synthase domain-like 11
Prokaryotic type KH domain (KH-domain type II) Rad51 N-terminal domain-like 11
post-HMGL domain-like Single hybrid motif 11
NagB/RpiA/CoA transferase-like alpha-helical ferredoxin 11
Cryptochrome/photolyase, N-terminal domain Cryptochrome/photolyase FAD-binding domain 11
PreATP-grasp domain Methylglyoxal synthase-like 11
Adenine nucleotide alpha hydrolases-like Rhodanese/Cell cycle control phosphatase 11
Homocysteine S-methyltransferase Methionine synthase activation domain-like 11
L30e-like alpha/beta knot 11
E set domains Six-hairpin glycosidases 11

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