SUPERFAMILY 1.75 HMM library and genome assignments server

Domain combination pairs in Acidiphilium multivorum AIU301

All pairs of domain combinations at the superfamily level are listed here.
The identification of domain pairs does not account for the possibility of non-contiguous domains. Inserted, or interlaced, domains are seen as having a simple pair ordering.

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Adjacent domain pairs graph

Graph of adjacent domain pairs.


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Domain combination pairs

652 domain combination pairs.
Click on a column heading to sort that column, or the 'View' button to see domain architetures for that domain pair combination.

Superfamily (N) Superfamily (C) Number of occurrances Number unique
P-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases 4015
"Winged helix" DNA-binding domain Periplasmic binding protein-like II 311
NAD(P)-binding Rossmann-fold domains 6-phosphogluconate dehydrogenase C-terminal domain-like 214
NAD(P)-binding Rossmann-fold domains Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 204
Homodimeric domain of signal transducing histidine kinase ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 168
Actin-like ATPase domain Actin-like ATPase domain 154
GroES-like NAD(P)-binding Rossmann-fold domains 132
Acyl-CoA dehydrogenase NM domain-like Acyl-CoA dehydrogenase C-terminal domain-like 123
Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) 126
FAD/NAD(P)-binding domain FAD-linked reductases, C-terminal domain 114
Nucleotide cyclase EAL domain-like 116
P-loop containing nucleoside triphosphate hydrolases Homeodomain-like 115
ABC transporter transmembrane region P-loop containing nucleoside triphosphate hydrolases 112
CheY-like C-terminal effector domain of the bipartite response regulators 101
CO dehydrogenase molybdoprotein N-domain-like Molybdenum cofactor-binding domain 104
Resolvase-like Homeodomain-like 91
PYP-like sensor domain (PAS domain) EAL domain-like 95
Zn-dependent exopeptidases Bacterial exopeptidase dimerisation domain 91
Multidrug efflux transporter AcrB transmembrane domain Multidrug efflux transporter AcrB transmembrane domain 94
Formate dehydrogenase/DMSO reductase, domains 1-3 ADC-like 94
Formate/glycerate dehydrogenase catalytic domain-like NAD(P)-binding Rossmann-fold domains 92
PreATP-grasp domain Glutathione synthetase ATP-binding domain-like 96
PYP-like sensor domain (PAS domain) Nucleotide cyclase 95
Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains 83
Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains 83
Riboflavin synthase domain-like Ferredoxin reductase-like, C-terminal NADP-linked domain 85
Homeodomain-like Homeodomain-like 83
Cytochrome c Cytochrome c 85
Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains 83
Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains Multidrug efflux transporter AcrB transmembrane domain 83
Composite domain of metallo-dependent hydrolases Metallo-dependent hydrolases 84
Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains Multidrug efflux transporter AcrB transmembrane domain 83
FAD/NAD(P)-binding domain FAD/NAD-linked reductases, dimerisation (C-terminal) domain 74
"Winged helix" DNA-binding domain Dimeric alpha+beta barrel 71
"Winged helix" DNA-binding domain GntR ligand-binding domain-like 72
2Fe-2S ferredoxin-like CO dehydrogenase ISP C-domain like 72
P-loop containing nucleoside triphosphate hydrolases MOP-like 71
Calcium ATPase, transduction domain A HAD-like 77
lambda repressor-like DNA-binding domains Periplasmic binding protein-like I 71
Thiamin diphosphate-binding fold (THDP-binding) TK C-terminal domain-like 75
P-loop containing nucleoside triphosphate hydrolases Translation proteins 76
Thioredoxin-like GST C-terminal domain-like 71
Calcium ATPase, transduction domain A Calcium ATPase, transmembrane domain M 66
PreATP-grasp domain Rudiment single hybrid motif 64
Thiolase-like Thiolase-like 61
PYP-like sensor domain (PAS domain) PYP-like sensor domain (PAS domain) 65
P-loop containing nucleoside triphosphate hydrolases Ribosomal protein S5 domain 2-like 65
HAD-like Calcium ATPase, transmembrane domain M 66
FAD-binding/transporter-associated domain-like CO dehydrogenase flavoprotein C-terminal domain-like 62
CheY-like P-loop containing nucleoside triphosphate hydrolases 62
Glutathione synthetase ATP-binding domain-like Rudiment single hybrid motif 64
Nucleotidylyl transferase Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 65
FKBP-like Triger factor/SurA peptide-binding domain-like 53
MurD-like peptide ligases, catalytic domain MurD-like peptide ligases, peptide-binding domain 54
Sigma2 domain of RNA polymerase sigma factors Sigma3 and sigma4 domains of RNA polymerase sigma factors 52
P-loop containing nucleoside triphosphate hydrolases EF-G C-terminal domain-like 54
2Fe-2S ferredoxin-like Ferredoxin reductase-like, C-terminal NADP-linked domain 52
Thiamin diphosphate-binding fold (THDP-binding) DHS-like NAD/FAD-binding domain 51
Homeodomain-like Tetracyclin repressor-like, C-terminal domain 51
2Fe-2S ferredoxin-like Riboflavin synthase domain-like 52
FAD/NAD(P)-binding domain FAD/NAD(P)-binding domain 54
TPR-like UDP-Glycosyltransferase/glycogen phosphorylase 53
Multidrug resistance efflux transporter EmrE Multidrug resistance efflux transporter EmrE 52
CheY-like Homeodomain-like 51
IlvD/EDD N-terminal domain-like LeuD/IlvD-like 51
cAMP-binding domain-like "Winged helix" DNA-binding domain 42
FAD-binding/transporter-associated domain-like FAD-linked oxidases, C-terminal domain 42
EF-G C-terminal domain-like EF-G C-terminal domain-like 43
Glutamine synthetase, N-terminal domain Glutamine synthetase/guanido kinase 42
HAMP domain-like Homodimeric domain of signal transducing histidine kinase 42
"Winged helix" DNA-binding domain NagB/RpiA/CoA transferase-like 41
PYP-like sensor domain (PAS domain) Methyl-accepting chemotaxis protein (MCP) signaling domain 43
HAMP domain-like ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 42
TPR-like TPR-like 43
Class I glutamine amidotransferase-like Homeodomain-like 41
PYP-like sensor domain (PAS domain) Homodimeric domain of signal transducing histidine kinase 44
PYP-like sensor domain (PAS domain) ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 44
PurM N-terminal domain-like PurM C-terminal domain-like 42
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase Ribosomal protein S5 domain 2-like 44
Aminoacid dehydrogenase-like, N-terminal domain NAD(P)-binding Rossmann-fold domains 43
Phosphohistidine domain Phosphoenolpyruvate/pyruvate domain 44
Penicillin binding protein dimerisation domain beta-lactamase/transpeptidase-like 43
FAD/NAD(P)-binding domain Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain 42
Translation proteins EF-G C-terminal domain-like 43
ACT-like ACT-like 33
Metal cation-transporting ATPase, ATP-binding domain N Calcium ATPase, transmembrane domain M 33
(Trans)glycosidases Glycosyl hydrolase domain 33
Nicotinate/Quinolinate PRTase N-terminal domain-like Nicotinate/Quinolinate PRTase C-terminal domain-like 31
PLP-binding barrel Alanine racemase C-terminal domain-like 32
2Fe-2S ferredoxin-like 4Fe-4S ferredoxins 32
Nucleotide-diphospho-sugar transferases Nucleotide-diphospho-sugar transferases 33
Nitrite/Sulfite reductase N-terminal domain-like Nitrite and sulphite reductase 4Fe-4S domain-like 33
Glutathione synthetase ATP-binding domain-like Single hybrid motif 33
Diaminopimelate epimerase-like Diaminopimelate epimerase-like 31
Metal cation-transporting ATPase, ATP-binding domain N HAD-like 33
Rhodanese/Cell cycle control phosphatase Rhodanese/Cell cycle control phosphatase 32
HAMP domain-like Methyl-accepting chemotaxis protein (MCP) signaling domain 31
P-loop containing nucleoside triphosphate hydrolases Class I glutamine amidotransferase-like 31
Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain Phosphoenolpyruvate/pyruvate domain 33
Nqo1 FMN-binding domain-like Nqo1 middle domain-like 32
2Fe-2S ferredoxin-like Formate dehydrogenase/DMSO reductase, domains 1-3 32
Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain Phosphohistidine domain 33
"Winged helix" DNA-binding domain GAF domain-like 31
Class II aaRS and biotin synthetases Class II aaRS ABD-related 33
Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like 32
HMA, heavy metal-associated domain HAD-like 33
GAF domain-like EAL domain-like 33
ValRS/IleRS/LeuRS editing domain Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 33
Nucleic acid-binding proteins Nucleic acid-binding proteins 33
Nucleotidylyl transferase An anticodon-binding domain of class I aminoacyl-tRNA synthetases 31
HMA, heavy metal-associated domain Calcium ATPase, transduction domain A 33
Nqo1 FMN-binding domain-like Nqo1C-terminal domain-like 32
Nqo1 middle domain-like Nqo1C-terminal domain-like 32
Nucleotide-diphospho-sugar transferases UDP-Glycosyltransferase/glycogen phosphorylase 33
PreATP-grasp domain Single hybrid motif 33
Alpha-L RNA-binding motif Pseudouridine synthase 31
4Fe-4S ferredoxins Formate dehydrogenase/DMSO reductase, domains 1-3 32
ValRS/IleRS/LeuRS editing domain Nucleotidylyl transferase 33
Double Clp-N motif P-loop containing nucleoside triphosphate hydrolases 31
Calcium ATPase, transduction domain A Metal cation-transporting ATPase, ATP-binding domain N 33
Cupredoxins Cupredoxins 32
P-loop containing nucleoside triphosphate hydrolases post-AAA+ oligomerization domain-like 32
Rudiment single hybrid motif Single hybrid motif 33
Nqo5-like HydB/Nqo4-like 31
Origin of replication-binding domain, RBD-like P-loop containing nucleoside triphosphate hydrolases 32
Cytochrome c oxidase subunit II-like, transmembrane region Cupredoxins 32
Homeodomain-like SIS domain 21
NAD(P)-binding Rossmann-fold domains ClpP/crotonase 22
NTF2-like FAD/NAD(P)-binding domain 21
Pectin lyase-like Pectin lyase-like 22
P-loop containing nucleoside triphosphate hydrolases C-terminal domain of alpha and beta subunits of F1 ATP synthase 21
Bacterial muramidases Lysozyme-like 21
Sm-like ribonucleoproteins Mechanosensitive channel protein MscS (YggB), C-terminal domain 21
N-terminal domain of alpha and beta subunits of F1 ATP synthase C-terminal domain of alpha and beta subunits of F1 ATP synthase 21
HlyD-like secretion proteins HlyD-like secretion proteins 21
RuBisCO, large subunit, small (N-terminal) domain RuBisCo, C-terminal domain 21
Phosphoglucomutase, first 3 domains Phosphoglucomutase, first 3 domains 21
Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain 21
TPR-like Nucleotide-diphospho-sugar transferases 22
P-loop containing nucleoside triphosphate hydrolases Hypothetical protein YjiA, C-terminal domain 21
Ribosomal protein S5 domain 2-like Ribonuclease PH domain 2-like 22
Mechanosensitive channel protein MscS (YggB), transmembrane region Mechanosensitive channel protein MscS (YggB), C-terminal domain 21
Phosphoglucomutase, first 3 domains Phosphoglucomutase, C-terminal domain 21
N-terminal nucleophile aminohydrolases (Ntn hydrolases) Adenine nucleotide alpha hydrolases-like 21
6-phosphogluconate dehydrogenase C-terminal domain-like 6-phosphogluconate dehydrogenase C-terminal domain-like 22
Pectin lyase-like Autotransporter 22
Methylated DNA-protein cysteine methyltransferase domain Methylated DNA-protein cysteine methyltransferase, C-terminal domain 21
Thioesterase/thiol ester dehydrase-isomerase Thioesterase/thiol ester dehydrase-isomerase 22
Type II DNA topoisomerase GyrA/ParC C-terminal domain-like 22
HPr-like Phosphohistidine domain 22
"Winged helix" DNA-binding domain Chorismate lyase-like 21
Single hybrid motif CoA-dependent acyltransferases 21
Ribokinase-like Aldolase 21
FAD/NAD(P)-binding domain Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain 21
Translation proteins Ribosomal protein S5 domain 2-like 21
UDP-Glycosyltransferase/glycogen phosphorylase UDP-Glycosyltransferase/glycogen phosphorylase 22
RuvA domain 2-like P-loop containing nucleoside triphosphate hydrolases 22
"Winged helix" DNA-binding domain "Winged helix" DNA-binding domain 22
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase Type II DNA topoisomerase 22
beta-Roll beta-Roll 22
EF-G C-terminal domain-like Ribosomal protein S5 domain 2-like 21
N-terminal domain of alpha and beta subunits of F1 ATP synthase P-loop containing nucleoside triphosphate hydrolases 21
Adenine nucleotide alpha hydrolases-like DHS-like NAD/FAD-binding domain 21
ISP domain Bet v1-like 21
Prokaryotic type I DNA topoisomerase Zinc beta-ribbon 21
GroEL equatorial domain-like GroEL apical domain-like 21
HPr-like Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain 22
MurE/MurF N-terminal domain MurD-like peptide ligases, peptide-binding domain 21
lambda integrase-like, N-terminal domain DNA breaking-rejoining enzymes 22
Ribosomal protein S5 domain 2-like Type II DNA topoisomerase 22
OMPA-like OmpA-like 21
Oxidoreductase molybdopterin-binding domain E set domains 22
GroEL equatorial domain-like GroEL-intermediate domain like 21
PYP-like sensor domain (PAS domain) CheY-like 22
P-loop containing nucleoside triphosphate hydrolases EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 22
6-phosphogluconate dehydrogenase C-terminal domain-like ClpP/crotonase 22
Nucleotidyltransferase Nucleotidyltransferase substrate binding subunit/domain 22
DNA ligase/mRNA capping enzyme, catalytic domain Nucleic acid-binding proteins 22
Nucleotide-diphospho-sugar transferases Trimeric LpxA-like enzymes 21
Folate-binding domain Aminomethyltransferase beta-barrel domain 22
Nucleic acid-binding proteins Class II aaRS and biotin synthetases 22
E set domains (Trans)glycosidases 22
Cryptochrome/photolyase, N-terminal domain Cryptochrome/photolyase FAD-binding domain 22
Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex CoA-dependent acyltransferases 21
Mechanosensitive channel protein MscS (YggB), transmembrane region Sm-like ribonucleoproteins 21
tRNA-binding arm Class II aaRS and biotin synthetases 21
Chaperone J-domain HSP40/DnaJ peptide-binding domain 22
P-loop containing nucleoside triphosphate hydrolases "Winged helix" DNA-binding domain 22
HPr-like Phosphoenolpyruvate/pyruvate domain 22
Nucleotidyltransferase Poly A polymerase C-terminal region-like 22
Nitrite/Sulfite reductase N-terminal domain-like Nitrite/Sulfite reductase N-terminal domain-like 22
Nucleic acid-binding proteins P-loop containing nucleoside triphosphate hydrolases 22
MetI-like MetI-like 21
ParB/Sulfiredoxin KorB DNA-binding domain-like 21
CBS-domain pair FAD-binding/transporter-associated domain-like 21
Trypsin-like serine proteases PDZ domain-like 21
Clc chloride channel CBS-domain pair 21
PDZ domain-like PDZ domain-like 21
Glutathione synthetase ATP-binding domain-like Succinyl-CoA synthetase domains 22
PYP-like sensor domain (PAS domain) Homeodomain-like 22
ClpP/crotonase ClpP/crotonase 22
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase CheY-like 22
E set domains Glycosyl hydrolase domain 22
MurE/MurF N-terminal domain MurD-like peptide ligases, catalytic domain 21
6-phosphogluconate dehydrogenase C-terminal domain-like UDP-glucose/GDP-mannose dehydrogenase C-terminal domain 21
ThrRS/AlaRS common domain Class II aaRS and biotin synthetases 22
NAD(P)-binding Rossmann-fold domains UDP-glucose/GDP-mannose dehydrogenase C-terminal domain 21
PDZ domain-like ClpP/crotonase 21
Homodimeric domain of signal transducing histidine kinase CheY-like 22
RuvA domain 2-like JAB1/MPN domain 21
Nucleotide cyclase GAF domain-like 22
HSP40/DnaJ peptide-binding domain HSP40/DnaJ peptide-binding domain 22
Nucleic acid-binding proteins Translation proteins SH3-like domain 22
GroEL-intermediate domain like GroEL apical domain-like 21
P-loop containing nucleoside triphosphate hydrolases FtsH protease domain-like 22
HMA, heavy metal-associated domain Calcium ATPase, transmembrane domain M 22
Carbamate kinase-like ACT-like 22
Phospholipase D/nuclease Phospholipase D/nuclease 22
Cation efflux protein transmembrane domain-like Cation efflux protein cytoplasmic domain-like 21
NAD(P)-binding Rossmann-fold domains ACT-like 22
Translation proteins EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 22
Single hybrid motif Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex 21
Nucleic acid-binding proteins RuvA domain 2-like 22
PreATP-grasp domain Cyclophilin-like 11
GAF domain-like Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain 11
"Winged helix" DNA-binding domain S-adenosyl-L-methionine-dependent methyltransferases 11
Phoshotransferase/anion transport protein Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain 11
NAD(P)-binding Rossmann-fold domains Succinyl-CoA synthetase domains 11
Acylphosphatase/BLUF domain-like YrdC/RibB 11
DnaK suppressor protein DksA, alpha-hairpin domain Glucocorticoid receptor-like (DNA-binding domain) 11
RNase III domain-like dsRNA-binding domain-like 11
Glycosyl hydrolase domain Protein kinase-like (PK-like) 11
PreATP-grasp domain Methylglyoxal synthase-like 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) Alpha subunit of glutamate synthase, C-terminal domain 11
Prokaryotic type KH domain (KH-domain type II) Rad51 N-terminal domain-like 11
Thiamin diphosphate-binding fold (THDP-binding) Pyruvate-ferredoxin oxidoreductase, PFOR, domain III 11
Rudiment single hybrid motif post-HMGL domain-like 11
Molybdenum cofactor-binding domain Bet v1-like 11
Periplasmic binding protein-like II Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain 11
Glutamine synthetase/guanido kinase GatB/YqeY motif 11
Class I glutamine amidotransferase-like Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain 11
Formate/glycerate dehydrogenase catalytic domain-like Serine metabolism enzymes domain 11
Nucleic acid-binding proteins BRCT domain 11
NAD(P)-binding Rossmann-fold domains MurD-like peptide ligases, catalytic domain 11
Glutathione synthetase ATP-binding domain-like Aldolase 11
UBA-like Elongation factor Ts (EF-Ts), dimerisation domain 11
Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) Translation proteins 11
alpha-helical ferredoxin Respiratory nitrate reductase 1 gamma chain 11
Translation proteins ThrRS/AlaRS common domain 11
Formate/glycerate dehydrogenase catalytic domain-like ACT-like 11
Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 11
CheY-like Methylesterase CheB, C-terminal domain 11
S13-like H2TH domain Glucocorticoid receptor-like (DNA-binding domain) 11
Tubulin nucleotide-binding domain-like Tubulin C-terminal domain-like 11
Dihydropteroate synthetase-like Cobalamin (vitamin B12)-binding domain 11
Ribbon-helix-helix N-terminal domain of bifunctional PutA protein 11
P-loop containing nucleoside triphosphate hydrolases RecA protein, C-terminal domain 11
Alpha-L RNA-binding motif S-adenosyl-L-methionine-dependent methyltransferases 11
Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain ACT-like 11
PEP carboxykinase N-terminal domain PEP carboxykinase-like 11
Glutathione synthetase ATP-binding domain-like Carbamoyl phosphate synthetase, large subunit connection domain 11
lambda repressor-like DNA-binding domains Carbamoyl phosphate synthetase, small subunit N-terminal domain 11
Homeodomain-like Ribonuclease H-like 11
TATA-box binding protein-like DNA-glycosylase 11
RBP11-like subunits of RNA polymerase C-terminal domain of RNA polymerase alpha subunit 11
Nudix "Winged helix" DNA-binding domain 11
FAD/NAD(P)-binding domain Folate-binding domain 11
Nucleotidylyl transferase Alpha-L RNA-binding motif 11
Glutathione synthetase ATP-binding domain-like post-HMGL domain-like 11
"Winged helix" DNA-binding domain Rhodanese/Cell cycle control phosphatase 11
NAD(P)-binding Rossmann-fold domains Serine metabolism enzymes domain 11
Riboflavin synthase domain-like Riboflavin synthase domain-like 11
Terpenoid cyclases/Protein prenyltransferases Terpenoid cyclases/Protein prenyltransferases 11
P-loop containing nucleoside triphosphate hydrolases Homodimeric domain of signal transducing histidine kinase 11
ThrRS/AlaRS common domain Class II aaRS ABD-related 11
Periplasmic binding protein-like II ACT-like 11
Actin-like ATPase domain Heat shock protein 70kD (HSP70), peptide-binding domain 11
2,3-Bisphosphoglycerate-independent phosphoglycerate mutase, substrate-binding domain Alkaline phosphatase-like 11
Glutathione synthetase ATP-binding domain-like Glutathione synthetase ATP-binding domain-like 11
L30e-like alpha/beta knot 11
DNA/RNA polymerases Lesion bypass DNA polymerase (Y-family), little finger domain 11
P-loop containing nucleoside triphosphate hydrolases TRCF domain-like 11
Globin-like Riboflavin synthase domain-like 11
NusB-like S-adenosyl-L-methionine-dependent methyltransferases 11
Methionine synthase domain Methionine synthase activation domain-like 11
Rudiment single hybrid motif Cyclophilin-like 11
Transcription factor NusA, N-terminal domain Rad51 N-terminal domain-like 11
Chemotaxis receptor methyltransferase CheR, N-terminal domain S-adenosyl-L-methionine-dependent methyltransferases 11
NagB/RpiA/CoA transferase-like P-loop containing nucleoside triphosphate hydrolases 11
Rad51 N-terminal domain-like Rad51 N-terminal domain-like 11
PPK N-terminal domain-like PHP14-like 11
P-loop containing nucleoside triphosphate hydrolases C-terminal UvrC-binding domain of UvrB 11
Cyclophilin-like Cyclophilin-like 11
DNA repair protein MutS, domain II P-loop containing nucleoside triphosphate hydrolases 11
PK beta-barrel domain-like PK C-terminal domain-like 11
Nucleotide-diphospho-sugar transferases RmlC-like cupins 11
YjeF N-terminal domain-like Ribokinase-like 11
Sigma3 and sigma4 domains of RNA polymerase sigma factors Sigma3 and sigma4 domains of RNA polymerase sigma factors 11
Histidine-containing phosphotransfer domain, HPT domain Homodimeric domain of signal transducing histidine kinase 11
Ada DNA repair protein, N-terminal domain (N-Ada 10) TATA-box binding protein-like 11
Adenine nucleotide alpha hydrolases-like GMP synthetase C-terminal dimerisation domain 11
Putative DNA-binding domain P-loop containing nucleoside triphosphate hydrolases 11
Aldolase Single hybrid motif 11
HD-domain/PDEase-like Nucleotidyltransferase 11
"Winged helix" DNA-binding domain PLP-dependent transferases 11
2Fe-2S ferredoxin-like CO dehydrogenase flavoprotein C-terminal domain-like 11
L9 N-domain-like Ribosomal protein L9 C-domain 11
Elongation factor Ts (EF-Ts), dimerisation domain Elongation factor Ts (EF-Ts), dimerisation domain 11
MoeA N-terminal region -like MoeA C-terminal domain-like 11
P-loop containing nucleoside triphosphate hydrolases Signal peptide-binding domain 11
Ribonuclease PH domain 2-like Nucleic acid-binding proteins 11
Actin-like ATPase domain HD-domain/PDEase-like 11
Actin-like ATPase domain Heat shock protein 70kD (HSP70), C-terminal subdomain 11
CO dehydrogenase ISP C-domain like CO dehydrogenase flavoprotein C-terminal domain-like 11
NAD(P)-binding Rossmann-fold domains Isocitrate/Isopropylmalate dehydrogenase-like 11
DNA-glycosylase Nudix 11
Class I glutamine amidotransferase-like GMP synthetase C-terminal dimerisation domain 11
4Fe-4S ferredoxins HydA/Nqo6-like 11
GIY-YIG endonuclease C-terminal UvrC-binding domain of UvrB 11
Nucleic acid-binding proteins DNA helicase RuvA subunit, C-terminal domain 11
Metallo-dependent hydrolases SIS domain 11
Glutathione synthetase ATP-binding domain-like Acyl-CoA N-acyltransferases (Nat) 11
Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain Nucleotidylyl transferase 11
P-loop containing nucleoside triphosphate hydrolases TrpR-like 11
Nucleotidyltransferase substrate binding subunit/domain ACT-like 11
GIY-YIG endonuclease RuvA domain 2-like 11
Carbamoyl phosphate synthetase, large subunit connection domain Methylglyoxal synthase-like 11
Carbamate kinase-like PUA domain-like 11
Rudiment single hybrid motif Aldolase 11
N-acetylmuramoyl-L-alanine amidase-like PGBD-like 11
S-adenosylmethionine synthetase S-adenosylmethionine synthetase 11
Poly A polymerase C-terminal region-like ACT-like 11
TGS-like Class II aaRS ABD-related 11
PLP-dependent transferases PLP-dependent transferases 11
lambda repressor-like DNA-binding domains Class I glutamine amidotransferase-like 11
Phage tail proteins Phage tail proteins 11
DNA repair protein MutS, domain III P-loop containing nucleoside triphosphate hydrolases 11
DNA repair protein MutS, domain I DNA repair protein MutS, domain III 11
Histidine-containing phosphotransfer domain, HPT domain ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 11
NAD(P)-binding Rossmann-fold domains 1-deoxy-D-xylulose-5-phosphate reductoisomerase, C-terminal domain 11
NagB/RpiA/CoA transferase-like D-ribose-5-phosphate isomerase (RpiA), lid domain 11
GAF domain-like Homeodomain-like 11
FMN-linked oxidoreductases FAD/NAD(P)-binding domain 11
N-terminal domain of bifunctional PutA protein ALDH-like 11
YjgF-like YjgF-like 11
P-loop containing nucleoside triphosphate hydrolases HRDC-like 11
Translation initiation factor IF3, N-terminal domain Translation initiation factor IF3, C-terminal domain 11
Glutathione synthetase ATP-binding domain-like Phosphoenolpyruvate/pyruvate domain 11
GAF domain-like Phosphoenolpyruvate/pyruvate domain 11
Rho N-terminal domain-like P-loop containing nucleoside triphosphate hydrolases 11
Homocysteine S-methyltransferase Methionine synthase activation domain-like 11
CarD-like TRCF domain-like 11
PH0987 N-terminal domain-like Single hybrid motif 11
Leukotriene A4 hydrolase N-terminal domain Metalloproteases ("zincins"), catalytic domain 11
P-loop containing nucleoside triphosphate hydrolases Restriction endonuclease-like 11
FAD/NAD(P)-binding domain Aminomethyltransferase beta-barrel domain 11
Heat shock protein 70kD (HSP70), peptide-binding domain Heat shock protein 70kD (HSP70), C-terminal subdomain 11
Metallo-dependent phosphatases 5'-nucleotidase (syn. UDP-sugar hydrolase), C-terminal domain 11
EspE N-terminal domain-like Nucleotide-diphospho-sugar transferases 11
Class II aaRS and biotin synthetases Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) 11
(Trans)glycosidases (Trans)glycosidases 11
Macro domain-like Zn-dependent exopeptidases 11
PUA domain-like Ribosomal protein S5 domain 2-like 11
NAD(P)-binding Rossmann-fold domains LDH C-terminal domain-like 11
C-terminal UvrC-binding domain of UvrB RuvA domain 2-like 11
Molybdenum cofactor-binding domain Molybdenum cofactor-binding domain 11
DNA repair protein MutS, domain II DNA repair protein MutS, domain III 11
Obg GTP-binding protein N-terminal domain P-loop containing nucleoside triphosphate hydrolases 11
Phosphoenolpyruvate/pyruvate domain PK C-terminal domain-like 11
HMA, heavy metal-associated domain FAD/NAD(P)-binding domain 11
Methionine synthase domain Cobalamin (vitamin B12)-binding domain 11
Translation proteins Initiation factor IF2/eIF5b, domain 3 11
RuvA domain 2-like DNA helicase RuvA subunit, C-terminal domain 11
DNA repair protein MutS, domain I P-loop containing nucleoside triphosphate hydrolases 11
2Fe-2S ferredoxin-like alpha-helical ferredoxin 11
alpha/beta-Hydrolases AhpD-like 11
Acyl-CoA N-acyltransferases (Nat) Nudix 11
PreATP-grasp domain Aldolase 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) SIS domain 11
PTS system fructose IIA component-like Phosphoenolpyruvate/pyruvate domain 11
Ribonuclease PH domain 2-like Ribonuclease PH domain 2-like 11
Cyclophilin-like Single hybrid motif 11
P-loop containing nucleoside triphosphate hydrolases TGS-like 11
all-alpha NTP pyrophosphatases all-alpha NTP pyrophosphatases 11
Peptidase/esterase 'gauge' domain alpha/beta-Hydrolases 11
GAF domain-like P-loop containing nucleoside triphosphate hydrolases 11
Transcription factor NusA, N-terminal domain Prokaryotic type KH domain (KH-domain type II) 11
Photosystem II reaction centre subunit H, transmembrane region PRC-barrel domain 11
MCP/YpsA-like "Winged helix" DNA-binding domain 11
TK C-terminal domain-like Pyruvate-ferredoxin oxidoreductase, PFOR, domain III 11
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase DNA mismatch repair protein MutL 11
RmlC-like cupins RmlC-like cupins 11
Homocysteine S-methyltransferase Methionine synthase domain 11
(Trans)glycosidases Nucleotide-diphospho-sugar transferases 11
N-terminal domain of MutM-like DNA repair proteins Glucocorticoid receptor-like (DNA-binding domain) 11
HD-domain/PDEase-like TGS-like 11
Ribosomal protein L7/12, oligomerisation (N-terminal) domain ClpS-like 11
Ribosomal protein S5 domain 2-like Eukaryotic type KH-domain (KH-domain type I) 11
TolB, N-terminal domain Tricorn protease N-terminal domain 11
P-loop containing nucleoside triphosphate hydrolases ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 11
RuvA domain 2-like BRCT domain 11
DNA ligase/mRNA capping enzyme, catalytic domain BRCT domain 11
Carbamoyl phosphate synthetase, small subunit N-terminal domain Class I glutamine amidotransferase-like 11
PIN domain-like 5' to 3' exonuclease, C-terminal subdomain 11
PurM N-terminal domain-like PurM N-terminal domain-like 11
Ribosome binding protein Y (YfiA homologue) Nucleic acid-binding proteins 11
Methylglyoxal synthase-like Cytidine deaminase-like 11
Transcription factor NusA, N-terminal domain Nucleic acid-binding proteins 11
R1 subunit of ribonucleotide reductase, N-terminal domain PFL-like glycyl radical enzymes 11
Composite domain of metallo-dependent hydrolases SIS domain 11
Inosine monophosphate dehydrogenase (IMPDH) Nitrite and sulphite reductase 4Fe-4S domain-like 11
GAF domain-like GAF domain-like 11
Aldolase post-HMGL domain-like 11
CBS-domain pair Inosine monophosphate dehydrogenase (IMPDH) 11
Formyltransferase FMT C-terminal domain-like 11
Ribonuclease H-like DNA/RNA polymerases 11
Creatinase/prolidase N-terminal domain Creatinase/aminopeptidase 11
Globin-like Ferredoxin reductase-like, C-terminal NADP-linked domain 11
Homeodomain-like TATA-box binding protein-like 11
TPR-like Glutathione synthetase ATP-binding domain-like 11
Domain of the SRP/SRP receptor G-proteins P-loop containing nucleoside triphosphate hydrolases 11
"Winged helix" DNA-binding domain Acyl-CoA N-acyltransferases (Nat) 11
Ribosomal protein S5 domain 2-like HSP90 C-terminal domain 11
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase CheW-like 11
Eukaryotic type KH-domain (KH-domain type I) Nucleic acid-binding proteins 11
2Fe-2S ferredoxin-like ADC-like 11
Thioredoxin-like TPR-like 11
Sensory domain-like Methyl-accepting chemotaxis protein (MCP) signaling domain 11
ACT-like Formyltransferase 11
UROD/MetE-like UROD/MetE-like 11
Tropomyosin Nucleotide-diphospho-sugar transferases 11
EspE N-terminal domain-like P-loop containing nucleoside triphosphate hydrolases 11
PIN domain-like DNA/RNA polymerases 11
TerB-like Chaperone J-domain 11
Histidine-containing phosphotransfer domain, HPT domain CheW-like 11
YhbC-like, N-terminal domain YhbC-like, C-terminal domain 11
PTS system IIB component-like PTS system IIB component-like 11
Globin-like GAF domain-like 11
N-terminal domain of DnaB helicase P-loop containing nucleoside triphosphate hydrolases 11
MurCD N-terminal domain MurD-like peptide ligases, catalytic domain 11
Ada DNA repair protein, N-terminal domain (N-Ada 10) Homeodomain-like 11
LuxS/MPP-like metallohydrolase LuxS/MPP-like metallohydrolase 11
S-adenosyl-L-methionine-dependent methyltransferases Tropomyosin 11
4Fe-4S ferredoxins Respiratory nitrate reductase 1 gamma chain 11
Dihydropteroate synthetase-like Methionine synthase activation domain-like 11
Translation proteins PRC-barrel domain 11
Ribosomal protein S5 domain 2-like DNA mismatch repair protein MutL 11
P-loop containing nucleoside triphosphate hydrolases vWA-like 11
Ada DNA repair protein, N-terminal domain (N-Ada 10) DNA-glycosylase 11
Dihydropteroate synthetase-like Methionine synthase domain 11
FliG FliG 11
Nucleotidyltransferase substrate binding subunit/domain Nucleotidyltransferase substrate binding subunit/domain 11
Insert subdomain of RNA polymerase alpha subunit RBP11-like subunits of RNA polymerase 11
Flavoproteins Riboflavin synthase domain-like 11
Phage tail proteins Phage fibre proteins 11
PTS system fructose IIA component-like Phosphohistidine domain 11
PK beta-barrel domain-like Phosphoenolpyruvate/pyruvate domain 11
Adenine nucleotide alpha hydrolases-like Argininosuccinate synthetase, C-terminal domain 11
Aminoacid dehydrogenase-like, N-terminal domain Isocitrate/Isopropylmalate dehydrogenase-like 11
Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 1-deoxy-D-xylulose-5-phosphate reductoisomerase, C-terminal domain 11
Lysozyme-like beta-lactamase/transpeptidase-like 11
Sigma3 and sigma4 domains of RNA polymerase sigma factors Ribonuclease H-like 11
FAD-binding/transporter-associated domain-like Uridine diphospho-N-Acetylenolpyruvylglucosamine reductase, MurB, C-terminal domain 11
Translation proteins Translation proteins 11
P-loop containing nucleoside triphosphate hydrolases Helical scaffold and wing domains of SecA 11
AraD/HMP-PK domain-like NAD(P)-binding Rossmann-fold domains 11
PIN domain-like Ribonuclease H-like 11
Ribosomal protein S5 domain 2-like GHMP Kinase, C-terminal domain 11
Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases tRNA-binding arm 11
Nucleic acid-binding proteins Anticodon-binding domain of PheRS 11
Prokaryotic type KH domain (KH-domain type II) Ribosomal protein S3 C-terminal domain 11
S-adenosyl-L-methionine-dependent methyltransferases S-adenosyl-L-methionine-dependent methyltransferases 11
Cytidine deaminase-like Dihydrofolate reductase-like 11
"Winged helix" DNA-binding domain Actin-like ATPase domain 11
RmlC-like cupins Homeodomain-like 11
NAD(P)-binding Rossmann-fold domains MurD-like peptide ligases, peptide-binding domain 11
DNA clamp DNA clamp 11
P-loop containing nucleoside triphosphate hydrolases Initiation factor IF2/eIF5b, domain 3 11
DNA repair protein MutS, domain I DNA repair protein MutS, domain II 11
Homodimeric domain of signal transducing histidine kinase CheW-like 11
GroES-like GroES-like 11
Ribbon-helix-helix FAD-linked oxidoreductase 11
Acyl-CoA N-acyltransferases (Nat) Acyl-CoA N-acyltransferases (Nat) 11
Fe,Mn superoxide dismutase (SOD), N-terminal domain Fe,Mn superoxide dismutase (SOD), C-terminal domain 11
Glutathione synthetase ATP-binding domain-like PH0987 N-terminal domain-like 11
Phoshotransferase/anion transport protein Phosphoenolpyruvate/pyruvate domain 11
Rho N-terminal domain-like Nucleic acid-binding proteins 11
Hypothetical protein SAV1430 Fe-S cluster assembly (FSCA) domain-like 11
Glutathione synthetase ATP-binding domain-like Phosphohistidine domain 11
Ribonuclease H-like HRDC-like 11
Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) ThrRS/AlaRS common domain 11
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase HSP90 C-terminal domain 11
Insert subdomain of RNA polymerase alpha subunit C-terminal domain of RNA polymerase alpha subunit 11
Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain 11
Class II aaRS and biotin synthetases GAD domain-like 11
NagB/RpiA/CoA transferase-like alpha-helical ferredoxin 11
Voltage-gated potassium channels NAD(P)-binding Rossmann-fold domains 11
5' to 3' exonuclease, C-terminal subdomain DNA/RNA polymerases 11
Homeodomain-like DNA-glycosylase 11
FAD-linked reductases, C-terminal domain 4Fe-4S ferredoxins 11
Transmembrane di-heme cytochromes a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) 11
NagB/RpiA/CoA transferase-like NagB/RpiA/CoA transferase-like 11
Nucleotidyltransferase substrate binding subunit/domain Poly A polymerase C-terminal region-like 11
gp5 N-terminal domain-like Phage fibre proteins 11
Methylglyoxal synthase-like Methylglyoxal synthase-like 11
P-loop containing nucleoside triphosphate hydrolases Dehydroquinate synthase-like 11
MurCD N-terminal domain MurD-like peptide ligases, peptide-binding domain 11
PYP-like sensor domain (PAS domain) P-loop containing nucleoside triphosphate hydrolases 11
MoeA N-terminal region -like Molybdenum cofactor biosynthesis proteins 11
Heme-dependent peroxidases Heme-dependent peroxidases 11
Metallo-dependent phosphatases Radical SAM enzymes 11
Enolase N-terminal domain-like Enolase C-terminal domain-like 11
Pre-protein crosslinking domain of SecA Helical scaffold and wing domains of SecA 11
Succinyl-CoA synthetase domains Succinyl-CoA synthetase domains 11
"Winged helix" DNA-binding domain Phospholipase D/nuclease 11
Ribbon-helix-helix ALDH-like 11
Ribosomal protein S5 domain 2-like Nucleic acid-binding proteins 11
FabD/lysophospholipase-like Probable ACP-binding domain of malonyl-CoA ACP transacylase 11
Nitrite and sulphite reductase 4Fe-4S domain-like Nitrite and sulphite reductase 4Fe-4S domain-like 11
Nucleotidyltransferase Nucleotidyltransferase 11
Ribonuclease PH domain 2-like Eukaryotic type KH-domain (KH-domain type I) 11
Coiled-coil domain of nucleotide exchange factor GrpE Head domain of nucleotide exchange factor GrpE 11
Single hybrid motif TK C-terminal domain-like 11
PLP-dependent transferases FMN-dependent nitroreductase-like 11
Thioredoxin-like Nqo1 middle domain-like 11
GAF domain-like Phosphohistidine domain 11
N-utilization substance G protein NusG, N-terminal domain Translation proteins SH3-like domain 11
P-loop containing nucleoside triphosphate hydrolases Pre-protein crosslinking domain of SecA 11
S-adenosyl-L-methionine-dependent methyltransferases Putative methyltransferase TM0872, insert domain 11
Nucleotidyltransferase ACT-like 11
Zinc beta-ribbon DNA primase core 11
Phoshotransferase/anion transport protein HPr-like 11
N-terminal domain of bifunctional PutA protein FAD-linked oxidoreductase 11
FAD/NAD(P)-binding domain HI0933 insert domain-like 11
FAD-linked oxidoreductase ALDH-like 11
Ribosomal L11/L12e N-terminal domain Ribosomal protein L11, C-terminal domain 11
PRTase-like PRTase-like 11
Nucleotidylyl transferase tRNA-binding arm 11
Thioesterase/thiol ester dehydrase-isomerase Isocitrate/Isopropylmalate dehydrogenase-like 11
PHP14-like Phospholipase D/nuclease 11
"Winged helix" DNA-binding domain LexA/Signal peptidase 11
Globin-like Methyl-accepting chemotaxis protein (MCP) signaling domain 11
PreATP-grasp domain PH0987 N-terminal domain-like 11
CO dehydrogenase molybdoprotein N-domain-like Bet v1-like 11
TGS-like Class II aaRS and biotin synthetases 11
Single hybrid motif Thiamin diphosphate-binding fold (THDP-binding) 11
HRDC-like HRDC-like 11
PheT/TilS domain Anticodon-binding domain of PheRS 11
Chaperone J-domain DnaJ/Hsp40 cysteine-rich domain 11
Class II aaRS and biotin synthetases C-terminal domain of transcriptional repressors 11
Nucleotide cyclase SMAD/FHA domain 11
Ribosomal protein L6 Ribosomal protein L6 11
Serine metabolism enzymes domain ACT-like 11
Creatinase/prolidase N-terminal domain Creatinase/prolidase N-terminal domain 11
Succinyl-CoA synthetase domains Acyl-CoA N-acyltransferases (Nat) 11
PTS system fructose IIA component-like HPr-like 11
Class II aaRS and biotin synthetases Translation proteins 11
"Winged helix" DNA-binding domain Iron-dependent repressor protein, dimerization domain 11
PTS system fructose IIA component-like Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain 11
HMA, heavy metal-associated domain Metal cation-transporting ATPase, ATP-binding domain N 11
Nucleotide-binding domain Nucleotide-binding domain 11
TPR-like P-loop containing nucleoside triphosphate hydrolases 11
YlxR-like L30e-like 11
HMA, heavy metal-associated domain FAD/NAD-linked reductases, dimerisation (C-terminal) domain 11
E set domains E set domains 11
DNA ligase/mRNA capping enzyme, catalytic domain RuvA domain 2-like 11
Ferritin-like MFS general substrate transporter 11
Cyclophilin-like PH0987 N-terminal domain-like 11
SGNH hydrolase Autotransporter 11
Tryptophan synthase beta subunit-like PLP-dependent enzymes ACT-like 11
lambda repressor-like DNA-binding domains RmlC-like cupins 11
Nucleic acid-binding proteins PheT/TilS domain 11
Tetrapyrrole methylase S-adenosyl-L-methionine-dependent methyltransferases 11
Subtilisin-like Autotransporter 11
Nucleic acid-binding proteins Prokaryotic type KH domain (KH-domain type II) 11
ValRS/IleRS/LeuRS editing domain tRNA-binding arm 11
Hsp33 domain HSP33 redox switch-like 11
Glutathione synthetase ATP-binding domain-like Cyclophilin-like 11
PreATP-grasp domain PreATP-grasp domain 11
Homo-oligomeric flavin-containing Cys decarboxylases, HFCD CoaB-like 11
Globin-like EAL domain-like 11
5' to 3' exonuclease, C-terminal subdomain Ribonuclease H-like 11
Nucleic acid-binding proteins GAD domain-like 11
Rudiment single hybrid motif PH0987 N-terminal domain-like 11
DPP6 N-terminal domain-like alpha/beta-Hydrolases 11
alpha-helical ferredoxin Nucleotide-binding domain 11
CO dehydrogenase ISP C-domain like FAD-binding/transporter-associated domain-like 11
Glucocorticoid receptor-like (DNA-binding domain) P-loop containing nucleoside triphosphate hydrolases 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) FMN-linked oxidoreductases 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) PRTase-like 11
Nucleotidylyl transferase Riboflavin kinase-like 11
(Trans)glycosidases Protein kinase-like (PK-like) 11
DnaJ/Hsp40 cysteine-rich domain HSP40/DnaJ peptide-binding domain 11
PheT/TilS domain Class II aaRS and biotin synthetases 11
Phoshotransferase/anion transport protein Phosphohistidine domain 11
Trigger factor ribosome-binding domain FKBP-like 11
Thioredoxin-like Nqo1C-terminal domain-like 11
Aldolase SIS domain 11
Flavoproteins Ferredoxin reductase-like, C-terminal NADP-linked domain 11
FAD/NAD(P)-binding domain Nitrite/Sulfite reductase N-terminal domain-like 11
Fumarylacetoacetate hydrolase, FAH, N-terminal domain FAH 11
PPK N-terminal domain-like Phospholipase D/nuclease 11
P-loop containing nucleoside triphosphate hydrolases Prokaryotic type KH domain (KH-domain type II) 11
Nucleic acid-binding proteins Rad51 N-terminal domain-like 11
beta-lactamase/transpeptidase-like Penicillin-binding protein associated domain 11
YrdC/RibB RibA-like 11
FAD/NAD(P)-binding domain Nitrite and sulphite reductase 4Fe-4S domain-like 11
Homocysteine S-methyltransferase Cobalamin (vitamin B12)-binding domain 11
Carbon-nitrogen hydrolase Adenine nucleotide alpha hydrolases-like 11
Adenine nucleotide alpha hydrolases-like Adenine nucleotide alpha hydrolases-like 11
S-adenosyl-L-methionine-dependent methyltransferases UDP-Glycosyltransferase/glycogen phosphorylase 11
Fe-S cluster assembly (FSCA) domain-like P-loop containing nucleoside triphosphate hydrolases 11
Nucleotidyltransferase TGS-like 11
GreA transcript cleavage protein, N-terminal domain FKBP-like 11
Thioredoxin-like Nqo1 FMN-binding domain-like 11
(Trans)glycosidases Beta-D-glucan exohydrolase, C-terminal domain 11
Aldolase 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain 11
P-loop containing nucleoside triphosphate hydrolases CarD-like 11
Aconitase iron-sulfur domain LeuD/IlvD-like 11
GAF domain-like PYP-like sensor domain (PAS domain) 11
Cation efflux protein transmembrane domain-like Cation efflux protein transmembrane domain-like 11
Cobalamin (vitamin B12)-binding domain Methionine synthase activation domain-like 11
HAMP domain-like PYP-like sensor domain (PAS domain) 11
N-terminal domain of MutM-like DNA repair proteins S13-like H2TH domain 11
Thioredoxin-like Six-hairpin glycosidases 11
post-HMGL domain-like Single hybrid motif 11
Ribokinase-like Nucleotidylyl transferase 11
Phage tail proteins gp5 N-terminal domain-like 11
HCP-like HCP-like 11
PUA domain-like alpha/beta knot 11
Glutathione synthetase ATP-binding domain-like Methylglyoxal synthase-like 11
FAD/NAD(P)-binding domain 4Fe-4S ferredoxins 11
Class I glutamine amidotransferase-like Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain 11
4Fe-4S ferredoxins ADC-like 11
PurM C-terminal domain-like PurM C-terminal domain-like 11
Nucleotide-diphospho-sugar transferases PilZ domain-like 11
TGS-like ThrRS/AlaRS common domain 11
Prokaryotic type KH domain (KH-domain type II) Prokaryotic type KH domain (KH-domain type II) 11
S-adenosyl-L-methionine-dependent methyltransferases P-loop containing nucleoside triphosphate hydrolases 11
Molybdenum cofactor biosynthesis proteins MoeA C-terminal domain-like 11
dsRNA-binding domain-like Ribosomal protein S5 domain 2-like 11
2Fe-2S ferredoxin-like FAD-binding/transporter-associated domain-like 11
Trigger factor ribosome-binding domain Triger factor/SurA peptide-binding domain-like 11
PreATP-grasp domain Carbamoyl phosphate synthetase, large subunit connection domain 11
Class II aaRS and biotin synthetases Anticodon-binding domain of PheRS 11
Homocysteine S-methyltransferase Dihydropteroate synthetase-like 11
PreATP-grasp domain post-HMGL domain-like 11
FMN-linked oxidoreductases Alpha subunit of glutamate synthase, C-terminal domain 11
D-ribose-5-phosphate isomerase (RpiA), lid domain P-loop containing nucleoside triphosphate hydrolases 11
Class I glutamine amidotransferase-like Adenine nucleotide alpha hydrolases-like 11
PUA domain-like P-loop containing nucleoside triphosphate hydrolases 11
Dimeric alpha+beta barrel alpha/beta-Hydrolases 11

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