SUPERFAMILY 1.75 HMM library and genome assignments server

Domain combination pairs in Pichia stipitis CBS 6054

All pairs of domain combinations at the superfamily level are listed here.
The identification of domain pairs does not account for the possibility of non-contiguous domains. Inserted, or interlaced, domains are seen as having a simple pair ordering.

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Adjacent domain pairs graph

Graph of adjacent domain pairs.


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Domain combination pairs

905 domain combination pairs.
Click on a column heading to sort that column, or the 'View' button to see domain architetures for that domain pair combination.

Superfamily (N) Superfamily (C) Number of occurrances Number unique
P-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases 7234
Actin-like ATPase domain Actin-like ATPase domain 3113
GroES-like NAD(P)-binding Rossmann-fold domains 243
Calcium ATPase, transduction domain A Calcium ATPase, transmembrane domain M 166
ABC transporter transmembrane region P-loop containing nucleoside triphosphate hydrolases 166
Calcium ATPase, transduction domain A HAD-like 166
HAD-like Calcium ATPase, transmembrane domain M 166
ARM repeat ARM repeat 1513
TPR-like TPR-like 159
RNA-binding domain, RBD RNA-binding domain, RBD 1411
P-loop containing nucleoside triphosphate hydrolases Translation proteins 149
NAD(P)-binding Rossmann-fold domains Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 134
Calcium ATPase, transduction domain A Metal cation-transporting ATPase, ATP-binding domain N 133
Riboflavin synthase domain-like Ferredoxin reductase-like, C-terminal NADP-linked domain 136
Metal cation-transporting ATPase, ATP-binding domain N Calcium ATPase, transmembrane domain M 133
Metal cation-transporting ATPase, ATP-binding domain N HAD-like 133
FAD/NAD(P)-binding domain FAD-linked reductases, C-terminal domain 125
Actin-like ATPase domain Heat shock protein 70kD (HSP70), peptide-binding domain 115
ABC transporter transmembrane region ABC transporter transmembrane region 113
Ypt/Rab-GAP domain of gyp1p Ypt/Rab-GAP domain of gyp1p 115
FAD/NAD(P)-binding domain FAD/NAD(P)-binding domain 105
(Trans)glycosidases Glycosyl hydrolase domain 94
GroEL equatorial domain-like GroEL apical domain-like 92
Nucleotidylyl transferase Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 97
Homeodomain-like Homeodomain-like 96
WD40 repeat-like WD40 repeat-like 95
NAD(P)-binding Rossmann-fold domains 6-phosphogluconate dehydrogenase C-terminal domain-like 93
Protein kinase-like (PK-like) ARM repeat 98
L domain-like L domain-like 85
GroEL equatorial domain-like GroEL-intermediate domain like 81
Formate/glycerate dehydrogenase catalytic domain-like NAD(P)-binding Rossmann-fold domains 83
GroEL-intermediate domain like GroEL apical domain-like 81
LuxS/MPP-like metallohydrolase LuxS/MPP-like metallohydrolase 85
Aminoacid dehydrogenase-like, N-terminal domain NAD(P)-binding Rossmann-fold domains 85
Actin-like ATPase domain Heat shock protein 70kD (HSP70), C-terminal subdomain 83
PreATP-grasp domain Glutathione synthetase ATP-binding domain-like 88
Cyclin-like Cyclin-like 85
Heat shock protein 70kD (HSP70), peptide-binding domain Heat shock protein 70kD (HSP70), C-terminal subdomain 72
Thioesterase/thiol ester dehydrase-isomerase Thioesterase/thiol ester dehydrase-isomerase 75
Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) 74
beta-beta-alpha zinc fingers beta-beta-alpha zinc fingers 75
(Trans)glycosidases Beta-D-glucan exohydrolase, C-terminal domain 73
Thiolase-like Thiolase-like 72
Leukotriene A4 hydrolase N-terminal domain Metalloproteases ("zincins"), catalytic domain 73
Class II aaRS and biotin synthetases Class II aaRS ABD-related 66
Translation proteins EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 62
EF-G C-terminal domain-like EF-G C-terminal domain-like 65
Nucleic acid-binding proteins P-loop containing nucleoside triphosphate hydrolases 61
Chaperone J-domain HSP40/DnaJ peptide-binding domain 65
P-loop containing nucleoside triphosphate hydrolases EF-G C-terminal domain-like 65
P-loop containing nucleoside triphosphate hydrolases EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 62
P-loop containing nucleoside triphosphate hydrolases post-AAA+ oligomerization domain-like 63
MFS general substrate transporter MFS general substrate transporter 62
Translation proteins EF-G C-terminal domain-like 65
Nucleic acid-binding proteins Class II aaRS and biotin synthetases 63
Thioredoxin-like GST C-terminal domain-like 63
P-loop containing nucleoside triphosphate hydrolases Ribosomal protein S5 domain 2-like 65
Zn-finger domain of Sec23/24 vWA-like 53
beta-sandwich domain of Sec23/24 vWA-like 53
Helical domain of Sec23/24 C-terminal, gelsolin-like domain of Sec23/24 53
PreATP-grasp domain Rudiment single hybrid motif 55
Chaperone J-domain DnaJ/Hsp40 cysteine-rich domain 54
Aconitase iron-sulfur domain LeuD/IlvD-like 51
DnaJ/Hsp40 cysteine-rich domain HSP40/DnaJ peptide-binding domain 54
Zn-finger domain of Sec23/24 C-terminal, gelsolin-like domain of Sec23/24 53
vWA-like Helical domain of Sec23/24 53
Ribonuclease H-like DNA/RNA polymerases 52
ValRS/IleRS/LeuRS editing domain Nucleotidylyl transferase 53
ValRS/IleRS/LeuRS editing domain Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 53
vWA-like C-terminal, gelsolin-like domain of Sec23/24 53
Zn-finger domain of Sec23/24 Helical domain of Sec23/24 53
beta-sandwich domain of Sec23/24 Helical domain of Sec23/24 53
beta-sandwich domain of Sec23/24 C-terminal, gelsolin-like domain of Sec23/24 53
BAR/IMD domain-like SH3-domain 54
Glutathione synthetase ATP-binding domain-like Rudiment single hybrid motif 55
Zn-dependent exopeptidases Bacterial exopeptidase dimerisation domain 53
CRAL/TRIO N-terminal domain CRAL/TRIO domain 53
beta-sandwich domain of Sec23/24 Zn-finger domain of Sec23/24 53
EF-G C-terminal domain-like Ribosomal protein S5 domain 2-like 43
Translation proteins Ribosomal protein S5 domain 2-like 43
Ribosomal protein S5 domain 2-like Ribonuclease PH domain 2-like 41
DNA repair protein MutS, domain III P-loop containing nucleoside triphosphate hydrolases 44
Nucleic acid-binding proteins Translation proteins SH3-like domain 43
HSP40/DnaJ peptide-binding domain HSP40/DnaJ peptide-binding domain 43
SH3-domain SH3-domain 44
Creatinase/prolidase N-terminal domain Creatinase/aminopeptidase 44
P-loop containing nucleoside triphosphate hydrolases TGS-like 41
FAD-binding/transporter-associated domain-like FAD-linked oxidases, C-terminal domain 42
Nucleic acid-binding proteins Nucleic acid-binding proteins 44
(Trans)glycosidases Galactose mutarotase-like 43
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase Ribosomal protein S5 domain 2-like 44
PA domain Zn-dependent exopeptidases 44
Thiamin diphosphate-binding fold (THDP-binding) DHS-like NAD/FAD-binding domain 41
F-box domain RNI-like 44
SNARE-like Second domain of Mu2 adaptin subunit (ap50) of ap2 adaptor 43
P-loop containing nucleoside triphosphate hydrolases RING/U-box 42
Cullin homology domain "Winged helix" DNA-binding domain 42
P-loop containing nucleoside triphosphate hydrolases NAD(P)-binding Rossmann-fold domains 43
Ribosomal protein S5 domain 2-like GHMP Kinase, C-terminal domain 42
Thioredoxin-like Thioredoxin-like 43
Rudiment single hybrid motif Single hybrid motif 33
CCCH zinc finger CCCH zinc finger 33
HMA, heavy metal-associated domain Calcium ATPase, transduction domain A 33
Composite domain of metallo-dependent hydrolases Metallo-dependent hydrolases 32
ENTH/VHS domain GAT-like domain 33
RING/U-box Cysteine proteinases 33
FAD/NAD(P)-binding domain Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain 33
BAR/IMD domain-like GTPase activation domain, GAP 33
Phosphoglucomutase, first 3 domains Phosphoglucomutase, first 3 domains 33
Aminopeptidase/glucanase lid domain Zn-dependent exopeptidases 31
C2 domain (Calcium/lipid-binding domain, CaLB) C2 domain (Calcium/lipid-binding domain, CaLB) 33
FAD/NAD(P)-binding domain FAD/NAD-linked reductases, dimerisation (C-terminal) domain 32
Cullin repeat-like Cullin homology domain 31
"Winged helix" DNA-binding domain "Winged helix" DNA-binding domain 32
P-loop containing nucleoside triphosphate hydrolases FtsH protease domain-like 31
PIN domain-like 5' to 3' exonuclease, C-terminal subdomain 33
P-loop containing nucleoside triphosphate hydrolases Smc hinge domain 33
N-terminal domain of alpha and beta subunits of F1 ATP synthase P-loop containing nucleoside triphosphate hydrolases 33
Aldolase post-HMGL domain-like 32
ADC-like P-loop containing nucleoside triphosphate hydrolases 32
Bromodomain Bromodomain 33
FYVE/PHD zinc finger Clavaminate synthase-like 33
RING/U-box RING/U-box 33
Nucleotide-binding domain FAD-linked reductases, C-terminal domain 31
Galactose mutarotase-like Glycosyl hydrolase domain 32
Ubiquitin-like UBA-like 33
F-box domain WD40 repeat-like 32
PreATP-grasp domain Single hybrid motif 33
HMA, heavy metal-associated domain Calcium ATPase, transmembrane domain M 33
DNA repair protein MutS, domain I DNA repair protein MutS, domain III 33
Galactose-binding domain-like (Trans)glycosidases 32
EF-hand EF-hand 33
Protease propeptides/inhibitors Subtilisin-like 32
cAMP-binding domain-like cAMP-binding domain-like 33
HMA, heavy metal-associated domain HAD-like 33
Phospholipase D/nuclease Phospholipase D/nuclease 33
Thiamin diphosphate-binding fold (THDP-binding) TK C-terminal domain-like 33
DNA repair protein MutS, domain I P-loop containing nucleoside triphosphate hydrolases 33
Phosphoglucomutase, first 3 domains Phosphoglucomutase, C-terminal domain 33
P-loop containing nucleoside triphosphate hydrolases Phosphoglycerate mutase-like 32
CoA-dependent acyltransferases CoA-dependent acyltransferases 32
NAD(P)-binding Rossmann-fold domains LDH C-terminal domain-like 31
Multidrug resistance efflux transporter EmrE Multidrug resistance efflux transporter EmrE 32
DNA repair protein MutS, domain II DNA repair protein MutS, domain III 33
Galactose-binding domain-like beta-Galactosidase/glucuronidase domain 32
ARM repeat Clathrin adaptor appendage domain 33
P-loop containing nucleoside triphosphate hydrolases C-terminal domain of alpha and beta subunits of F1 ATP synthase 33
Glutathione synthetase ATP-binding domain-like Single hybrid motif 33
DAK1/DegV-like DhaL-like 31
Eukaryotic type KH-domain (KH-domain type I) Eukaryotic type KH-domain (KH-domain type I) 33
Clc chloride channel CBS-domain pair 33
CBS-domain pair CBS-domain pair 33
beta-Galactosidase/glucuronidase domain beta-Galactosidase/glucuronidase domain 32
alpha-ketoacid dehydrogenase kinase, N-terminal domain ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 33
Tubulin nucleotide-binding domain-like Tubulin C-terminal domain-like 31
ARM repeat P-loop containing nucleoside triphosphate hydrolases 33
DNA ligase/mRNA capping enzyme, catalytic domain Nucleic acid-binding proteins 33
SH3-domain PX domain 32
C2 domain (Calcium/lipid-binding domain, CaLB) Protein kinase-like (PK-like) 33
Fe,Mn superoxide dismutase (SOD), N-terminal domain Fe,Mn superoxide dismutase (SOD), C-terminal domain 31
FYVE/PHD zinc finger FYVE/PHD zinc finger 32
Cdc48 domain 2-like P-loop containing nucleoside triphosphate hydrolases 32
beta-Galactosidase/glucuronidase domain (Trans)glycosidases 32
P-loop containing nucleoside triphosphate hydrolases "Winged helix" DNA-binding domain 33
BRCT domain BRCT domain 33
ADC-like Cdc48 domain 2-like 32
Acyl-CoA dehydrogenase NM domain-like Acyl-CoA dehydrogenase C-terminal domain-like 33
P-loop containing nucleoside triphosphate hydrolases Bromodomain 33
N-terminal domain of alpha and beta subunits of F1 ATP synthase C-terminal domain of alpha and beta subunits of F1 ATP synthase 33
DNA-binding domain of Mlu1-box binding protein MBP1 Ankyrin repeat 32
P-loop containing nucleoside triphosphate hydrolases Aminoacid dehydrogenase-like, N-terminal domain 32
Cullin repeat-like "Winged helix" DNA-binding domain 31
DNA repair protein MutS, domain II P-loop containing nucleoside triphosphate hydrolases 33
Sec63 N-terminal domain-like E set domains 33
PA domain Transferrin receptor-like dimerisation domain 22
Glutathione synthetase ATP-binding domain-like Methylglyoxal synthase-like 22
CCCH zinc finger RNA-binding domain, RBD 22
Ankyrin repeat POZ domain 22
SH3-domain Ras GEF 22
SMAD/FHA domain "Winged helix" DNA-binding domain 22
ACT-like ACT-like 22
DBL homology domain (DH-domain) PH domain-like 22
ARID-like FYVE/PHD zinc finger 22
HCP-like HCP-like 22
(Phosphotyrosine protein) phosphatases II (Phosphotyrosine protein) phosphatases II 22
WW domain FKBP-like 21
Amine oxidase N-terminal region Amine oxidase catalytic domain 22
HMA, heavy metal-associated domain HMA, heavy metal-associated domain 22
t-snare proteins SNARE fusion complex 21
N-terminal nucleophile aminohydrolases (Ntn hydrolases) Adenine nucleotide alpha hydrolases-like 22
Voltage-gated potassium channels Voltage-gated potassium channels 22
WW domain WW domain 22
Zinc beta-ribbon Cyclin-like 22
Transducin (alpha subunit), insertion domain P-loop containing nucleoside triphosphate hydrolases 21
Glucocorticoid receptor-like (DNA-binding domain) Glucocorticoid receptor-like (DNA-binding domain) 22
PurM N-terminal domain-like PurM C-terminal domain-like 22
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase CheY-like 22
Glutathione synthetase ATP-binding domain-like Glutathione synthetase ATP-binding domain-like 22
Flavoproteins Ferredoxin reductase-like, C-terminal NADP-linked domain 21
ARM repeat WD40 repeat-like 22
P-loop containing nucleoside triphosphate hydrolases HAND domain of the nucleosome remodeling ATPase ISWI 22
Cupredoxins Cupredoxins 22
Class II aaRS and biotin synthetases ThrRS/AlaRS common domain 22
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase DNA mismatch repair protein MutL 22
Insert subdomain of RNA polymerase alpha subunit RBP11-like subunits of RNA polymerase 22
POZ domain POZ domain 22
PreATP-grasp domain Carbamoyl phosphate synthetase, large subunit connection domain 22
P-loop containing nucleoside triphosphate hydrolases Sec63 N-terminal domain-like 22
Cyclophilin-like TPR-like 21
Enolase N-terminal domain-like Enolase C-terminal domain-like 21
Sec63 N-terminal domain-like Sec63 N-terminal domain-like 22
Leukotriene A4 hydrolase N-terminal domain ARM repeat 21
Clathrin adaptor appendage domain Subdomain of clathrin and coatomer appendage domain 22
tRNA-binding arm Class II aaRS and biotin synthetases 22
BAR/IMD domain-like PH domain-like 22
R1 subunit of ribonucleotide reductase, N-terminal domain PFL-like glycyl radical enzymes 22
Nucleotidyltransferase PAP/OAS1 substrate-binding domain 22
Amine oxidase N-terminal region Amine oxidase N-terminal region 22
HAND domain of the nucleosome remodeling ATPase ISWI Homeodomain-like 22
PH domain-like PH domain-like 22
RING/U-box FYVE/PHD zinc finger 22
"Winged helix" DNA-binding domain Sec63 N-terminal domain-like 22
Tetrahydrobiopterin biosynthesis enzymes-like Tetrahydrobiopterin biosynthesis enzymes-like 22
TPR-like Chaperone J-domain 22
vWA-like SPOC domain-like 22
PUA domain-like P-loop containing nucleoside triphosphate hydrolases 22
Flavoproteins Riboflavin synthase domain-like 21
Acyl-CoA dehydrogenase C-terminal domain-like Acyl-CoA dehydrogenase C-terminal domain-like 22
"Winged helix" DNA-binding domain E set domains 22
HCP-like TPR-like 22
alpha/beta-Hydrolases (Phosphotyrosine protein) phosphatases II 22
Creatinase/aminopeptidase "Winged helix" DNA-binding domain 22
PreATP-grasp domain PreATP-grasp domain 22
PRTase-like PRTase-like 22
Restriction endonuclease-like RuvA domain 2-like 21
Cation efflux protein transmembrane domain-like Cation efflux protein cytoplasmic domain-like 22
Phosphofructokinase Phosphofructokinase 21
ARM repeat Hect, E3 ligase catalytic domain 21
ARID-like Clavaminate synthase-like 22
EF-hand Mitochondrial carrier 22
Aldolase 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain 21
Translation initiation factor 2 beta, aIF2beta, N-terminal domain Zinc-binding domain of translation initiation factor 2 beta 22
SNARE-like SNARE fusion complex 21
WD40 repeat-like RING/U-box 22
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 22
Zn-dependent exopeptidases Transferrin receptor-like dimerisation domain 22
Hypothetical protein SAV1430 Fe-S cluster assembly (FSCA) domain-like 21
Protein kinase-like (PK-like) KA1-like 22
RNase III domain-like dsRNA-binding domain-like 22
Ribosomal L11/L12e N-terminal domain Ribosomal protein L11, C-terminal domain 21
Zn2/Cys6 DNA-binding domain Zn2/Cys6 DNA-binding domain 22
Single hybrid motif Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex 22
E set domains AMPKBI-like 22
P-loop containing nucleoside triphosphate hydrolases Homeodomain-like 22
Initiation factor IF2/eIF5b, domain 3 Translation proteins 22
CorA soluble domain-like Magnesium transport protein CorA, transmembrane region 22
MurD-like peptide ligases, catalytic domain MurD-like peptide ligases, peptide-binding domain 22
post-HMGL domain-like 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain 21
DNA/RNA polymerases Lesion bypass DNA polymerase (Y-family), little finger domain 22
Glutathione synthetase ATP-binding domain-like Carbamoyl phosphate synthetase, large subunit connection domain 22
DPP6 N-terminal domain-like alpha/beta-Hydrolases 21
dsRNA-binding domain-like Ribosomal protein S5 domain 2-like 21
ARM repeat Formin homology 2 domain (FH2 domain) 21
RNI-like L domain-like 21
DNA repair protein MutS, domain I DNA repair protein MutS, domain II 22
Transcription factor IIA (TFIIA), alpha-helical domain Transcription factor IIA (TFIIA), beta-barrel domain 22
Metalloproteases ("zincins"), catalytic domain ARM repeat 21
F1F0 ATP synthase subunit C F1F0 ATP synthase subunit C 21
Cytochrome b5-like heme/steroid binding domain FMN-linked oxidoreductases 22
Ribosomal protein L6 Ribosomal protein L6 22
Translation proteins ThrRS/AlaRS common domain 22
Translational machinery components L30e-like 22
Nucleotidylyl transferase Ribosomal protein L25-like 22
Class I glutamine amidotransferase-like Ribulose-phoshate binding barrel 22
PH domain-like Oxysterol-binding protein-like 22
NagB/RpiA/CoA transferase-like NagB/RpiA/CoA transferase-like 21
Carbamoyl phosphate synthetase, large subunit connection domain Methylglyoxal synthase-like 22
SMAD/FHA domain Protein kinase-like (PK-like) 22
Homodimeric domain of signal transducing histidine kinase ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 22
Nucleic acid-binding proteins Eukaryotic type KH-domain (KH-domain type I) 22
SNARE fusion complex SNARE fusion complex 21
Single hybrid motif CoA-dependent acyltransferases 22
Homodimeric domain of signal transducing histidine kinase CheY-like 22
Nicotinate/Quinolinate PRTase N-terminal domain-like Nicotinate/Quinolinate PRTase C-terminal domain-like 21
ARM repeat Subdomain of clathrin and coatomer appendage domain 22
Domain of the SRP/SRP receptor G-proteins P-loop containing nucleoside triphosphate hydrolases 22
Carbamoyl phosphate synthetase, small subunit N-terminal domain Class I glutamine amidotransferase-like 22
Ankyrin repeat PLC-like phosphodiesterases 21
PriA/YqbF domain GINS helical bundle-like 22
P-loop containing nucleoside triphosphate hydrolases E set domains 22
P-loop containing nucleoside triphosphate hydrolases Initiation factor IF2/eIF5b, domain 3 22
PreATP-grasp domain Methylglyoxal synthase-like 22
N-terminal, heterodimerisation domain of RBP7 (RpoE) Nucleic acid-binding proteins 21
BAR/IMD domain-like "Winged helix" DNA-binding domain 11
Chaperone J-domain E set domains 11
PurS-like PurM C-terminal domain-like 11
Zinc beta-ribbon Zinc beta-ribbon 11
Chromo domain-like Acyl-CoA N-acyltransferases (Nat) 11
P-loop containing nucleoside triphosphate hydrolases Tropomyosin 11
RING/U-box RNA-binding domain, RBD 11
Protein kinase-like (PK-like) CheY-like 11
FabD/lysophospholipase-like Thioesterase/thiol ester dehydrase-isomerase 11
PDZ domain-like PDZ domain-like 11
Class I glutamine amidotransferase-like ADC synthase 11
Ubiquitin-like AN1-like Zinc finger 11
Acetyl-CoA synthetase-like Acetyl-CoA synthetase-like 11
Rhodanese/Cell cycle control phosphatase Cysteine proteinases 11
C2 domain (Calcium/lipid-binding domain, CaLB) WW domain 11
Phosphoenolpyruvate/pyruvate domain PK C-terminal domain-like 11
UBA-like UBA-like 11
Dehydroquinate synthase-like NAD(P)-binding Rossmann-fold domains 11
Ribonuclease H-like RNA-binding domain, RBD 11
Ras GEF Ras GEF 11
Glucocorticoid receptor-like (DNA-binding domain) GTPase activation domain, GAP 11
YbaK/ProRS associated domain C-terminal domain of ProRS 11
WD40 repeat-like Calcium-dependent phosphotriesterase 11
Zn2/Cys6 DNA-binding domain beta-sandwich domain of Sec23/24 11
UBC-like Protein kinase-like (PK-like) 11
Ribonuclease H-like SH2 domain 11
Amidase signature (AS) enzymes Glutathione synthetase ATP-binding domain-like 11
P-loop containing nucleoside triphosphate hydrolases Cytidine deaminase-like 11
"Winged helix" DNA-binding domain GTPase activation domain, GAP 11
HisI-like all-alpha NTP pyrophosphatases 11
EPT/RTPC-like Aldolase 11
post-HMGL domain-like Single hybrid motif 11
BEACH domain WD40 repeat-like 11
HR1 repeat C2 domain (Calcium/lipid-binding domain, CaLB) 11
L domain-like Nucleotide cyclase 11
PH domain-like UDP-Glycosyltransferase/glycogen phosphorylase 11
Methyl-accepting chemotaxis protein (MCP) signaling domain HAMP domain-like 11
PAP/OAS1 substrate-binding domain PAP/Archaeal CCA-adding enzyme, C-terminal domain 11
Glutamine synthetase/guanido kinase GatB/YqeY motif 11
Homing endonucleases Homing endonucleases 11
Carbamoyl phosphate synthetase, large subunit connection domain Metallo-dependent hydrolases 11
Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 Zinc beta-ribbon 11
Rudiment single hybrid motif PurM C-terminal domain-like 11
EF-hand C2 domain (Calcium/lipid-binding domain, CaLB) 11
Rhodanese/Cell cycle control phosphatase Rhodanese/Cell cycle control phosphatase 11
Globin-like Riboflavin synthase domain-like 11
Putative DNA-binding domain Putative DNA-binding domain 11
dsRNA-binding domain-like P-loop containing nucleoside triphosphate hydrolases 11
Flavoproteins Radical SAM enzymes 11
Nitrite/Sulfite reductase N-terminal domain-like Nitrite and sulphite reductase 4Fe-4S domain-like 11
Pyruvate-ferredoxin oxidoreductase, PFOR, domain III Riboflavin synthase domain-like 11
Thiamin pyrophosphokinase, catalytic domain Thiamin pyrophosphokinase, substrate-binding domain 11
Domain of the SRP/SRP receptor G-proteins Signal peptide-binding domain 11
Tex N-terminal region-like SH2 domain 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) FMN-linked oxidoreductases 11
VPS9 domain UBA-like 11
Tetrahydrobiopterin biosynthesis enzymes-like 6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase, HPPK 11
Amidase signature (AS) enzymes Single hybrid motif 11
Ubiquitin-like XPC-binding domain 11
PAH2 domain PAH2 domain 11
WD40 repeat-like Cyclophilin-like 11
TK C-terminal domain-like Pyruvate-ferredoxin oxidoreductase, PFOR, domain III 11
HAMP domain-like ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 11
Glutathione synthetase ATP-binding domain-like Metallo-dependent hydrolases 11
NAD(P)-binding Rossmann-fold domains 4'-phosphopantetheinyl transferase 11
EPT/RTPC-like Aminoacid dehydrogenase-like, N-terminal domain 11
Chaperone J-domain RNA-binding domain, RBD 11
Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Cytochrome b5-like heme/steroid binding domain 11
Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) Translation proteins 11
PX domain SNARE fusion complex 11
Tetrahydrobiopterin biosynthesis enzymes-like Dihydropteroate synthetase-like 11
Nucleic acid-binding proteins BRCT domain 11
BRCT domain Lesion bypass DNA polymerase (Y-family), little finger domain 11
RuvA domain 2-like SH2 domain 11
Rudiment single hybrid motif N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE) 11
UDP-Glycosyltransferase/glycogen phosphorylase UDP-Glycosyltransferase/glycogen phosphorylase 11
CCCH zinc finger RING/U-box 11
Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain 11
PreATP-grasp domain Aldolase 11
beta-Galactosidase/glucuronidase domain Galactose mutarotase-like 11
P-loop containing nucleoside triphosphate hydrolases Homing endonucleases 11
Nucleotidylyl transferase P-loop containing nucleoside triphosphate hydrolases 11
Methylglyoxal synthase-like Cytidine deaminase-like 11
Myosin S1 fragment, N-terminal domain P-loop containing nucleoside triphosphate hydrolases 11
E set domains Ankyrin repeat 11
Dom34/Pelota N-terminal domain-like Translational machinery components 11
PreATP-grasp domain Cyclophilin-like 11
Cyclophilin-like Cyclophilin-like 11
NSFL1 (p97 ATPase) cofactor p47, SEP domain Ubiquitin-like 11
DNA clamp DNA clamp 11
Surp module (SWAP domain) Surp module (SWAP domain) 11
PK beta-barrel domain-like Phosphoenolpyruvate/pyruvate domain 11
(Trans)glycosidases Six-hairpin glycosidases 11
DUSP-like Cysteine proteinases 11
P-loop containing nucleoside triphosphate hydrolases HRDC-like 11
Carbamoyl phosphate synthetase, large subunit connection domain Aspartate/ornithine carbamoyltransferase 11
FabD/lysophospholipase-like NAD(P)-binding Rossmann-fold domains 11
Carbamoyl phosphate synthetase, small subunit N-terminal domain Glutathione synthetase ATP-binding domain-like 11
Nitrite/Sulfite reductase N-terminal domain-like Nitrite/Sulfite reductase N-terminal domain-like 11
Periplasmic binding protein-like II ACT-like 11
Chromo domain-like Chromo domain-like 11
Thiamin diphosphate-binding fold (THDP-binding) Nitrite/Sulfite reductase N-terminal domain-like 11
Flavoproteins Nitrite and sulphite reductase 4Fe-4S domain-like 11
Coiled-coil domain of nucleotide exchange factor GrpE Head domain of nucleotide exchange factor GrpE 11
GST C-terminal domain-like eEF1-gamma domain 11
Retrovirus zinc finger-like domains Retrovirus zinc finger-like domains 11
C2 domain (Calcium/lipid-binding domain, CaLB) GTPase activation domain, GAP 11
FYVE/PHD zinc finger SET domain 11
Nucleotidyltransferase PAP/Archaeal CCA-adding enzyme, C-terminal domain 11
UBC-like Ribosomal protein S5 domain 2-like 11
Methyl-accepting chemotaxis protein (MCP) signaling domain Homodimeric domain of signal transducing histidine kinase 11
RING/U-box Homeodomain-like 11
Ran binding protein zinc finger-like "Winged helix" DNA-binding domain 11
Staphylococcal nuclease Staphylococcal nuclease 11
Hedgehog/intein (Hint) domain C-terminal domain of alpha and beta subunits of F1 ATP synthase 11
dsRNA-binding domain-like UBC-like 11
SAM/Pointed domain PH domain-like 11
Ankyrin repeat PH domain-like 11
Obg GTP-binding protein N-terminal domain P-loop containing nucleoside triphosphate hydrolases 11
YjgF-like YjgF-like 11
SpoIIaa-like cAMP-binding domain-like 11
L domain-like PP2C-like 11
ARM repeat Cyclin-like 11
Class II aaRS and biotin synthetases C-terminal domain of ProRS 11
Tryptophan synthase beta subunit-like PLP-dependent enzymes CBS-domain pair 11
BAR/IMD domain-like ArfGap/RecO-like zinc finger 11
Periplasmic binding protein-like II GlnB-like 11
N-terminal domain of alpha and beta subunits of F1 ATP synthase Hedgehog/intein (Hint) domain 11
FAS1 domain FAS1 domain 11
Carbamate kinase-like ACT-like 11
GST C-terminal domain-like Ribosomal protein L25-like 11
BRCT domain post-AAA+ oligomerization domain-like 11
MIT domain P-loop containing nucleoside triphosphate hydrolases 11
2Fe-2S ferredoxin-like 4Fe-4S ferredoxins 11
Glutathione synthetase ATP-binding domain-like post-HMGL domain-like 11
Chaperone J-domain HSC20 (HSCB), C-terminal oligomerisation domain 11
PUA domain-like Nucleotidylyl transferase 11
Ribosomal protein S5 domain 2-like HSP90 C-terminal domain 11
P-loop containing nucleoside triphosphate hydrolases Aldolase 11
BAR/IMD domain-like BAR/IMD domain-like 11
Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 Elongation factor TFIIS domain 2 11
Glutathione synthetase ATP-binding domain-like ClpP/crotonase 11
Glutathione synthetase ATP-binding domain-like N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE) 11
PP2C-like Nucleotide cyclase 11
ACP-like NAD(P)-binding Rossmann-fold domains 11
Glutamine synthetase, N-terminal domain Glutamine synthetase/guanido kinase 11
Acyl-CoA N-acyltransferases (Nat) Bromodomain 11
Ankyrin repeat Oxysterol-binding protein-like 11
FMN-linked oxidoreductases Alpha subunit of glutamate synthase, C-terminal domain 11
Cap-Gly domain RNI-like 11
Nucleotidylyl transferase Nucleotidylyl transferase 11
SET domain Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 11
TPR-like HSP20-like chaperones 11
Trypsin-like serine proteases Trypsin-like serine proteases 11
Ribosomal L27 protein-like Nucleic acid-binding proteins 11
YVTN repeat-like/Quinoprotein amine dehydrogenase RING/U-box 11
Radical SAM enzymes Acyl-CoA N-acyltransferases (Nat) 11
Pre-PUA domain PUA domain-like 11
TATA-box binding protein-like DNA-glycosylase 11
Eukaryotic type KH-domain (KH-domain type I) Retrovirus zinc finger-like domains 11
Tryptophan synthase beta subunit-like PLP-dependent enzymes ACT-like 11
Glycerol-3-phosphate (1)-acyltransferase Glycerol-3-phosphate (1)-acyltransferase 11
Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex CoA-dependent acyltransferases 11
Thiamin diphosphate-binding fold (THDP-binding) Nitrite and sulphite reductase 4Fe-4S domain-like 11
HAMP domain-like CheY-like 11
Amidase signature (AS) enzymes Rudiment single hybrid motif 11
Thiamin phosphate synthase Ribokinase-like 11
Single hybrid motif ClpP/crotonase 11
Macro domain-like DHS-like NAD/FAD-binding domain 11
"Winged helix" DNA-binding domain Protein kinase-like (PK-like) 11
Methylglyoxal synthase-like Aspartate/ornithine carbamoyltransferase 11
WD40 repeat-like YVTN repeat-like/Quinoprotein amine dehydrogenase 11
NAD(P)-binding Rossmann-fold domains Thioesterase/thiol ester dehydrase-isomerase 11
Retrovirus zinc finger-like domains RING/U-box 11
Glutathione synthetase ATP-binding domain-like Aspartate/ornithine carbamoyltransferase 11
Tropomyosin Smc hinge domain 11
UBC-like P-loop containing nucleoside triphosphate hydrolases 11
PH domain-like EF-hand 11
C2 domain (Calcium/lipid-binding domain, CaLB) Cysteine-rich domain 11
UBA-like XPC-binding domain 11
Flavoproteins Nitrite/Sulfite reductase N-terminal domain-like 11
Glutathione synthetase ATP-binding domain-like Succinyl-CoA synthetase domains 11
GST C-terminal domain-like Nucleotidylyl transferase 11
ATP-dependent DNA ligase DNA-binding domain DNA ligase/mRNA capping enzyme, catalytic domain 11
Acyl-CoA N-acyltransferases (Nat) Acyl-CoA N-acyltransferases (Nat) 11
Class I glutamine amidotransferase-like Carbamoyl phosphate synthetase, large subunit connection domain 11
HAD-like BRCT domain 11
Translation proteins Translation proteins 11
CBS-domain pair CAD & PB1 domains 11
PRP4-like WD40 repeat-like 11
PH domain-like "Winged helix" DNA-binding domain 11
Thioredoxin-like Ubiquitin-like 11
L domain-like NTF2-like 11
RuvA domain 2-like RuvA domain 2-like 11
DBL homology domain (DH-domain) Tricorn protease domain 2 11
Class I glutamine amidotransferase-like PreATP-grasp domain 11
SWIB/MDM2 domain eIF1-like 11
FabD/lysophospholipase-like FabD/lysophospholipase-like 11
HAMP domain-like Homodimeric domain of signal transducing histidine kinase 11
NAD(P)-binding Rossmann-fold domains Galactose mutarotase-like 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) alpha-helical ferredoxin 11
DNA ligase/mRNA capping enzyme, catalytic domain BRCT domain 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) SIS domain 11
CBS-domain pair Inosine monophosphate dehydrogenase (IMPDH) 11
PH domain-like ArfGap/RecO-like zinc finger 11
ATP-dependent DNA ligase DNA-binding domain Nucleic acid-binding proteins 11
P-loop containing nucleoside triphosphate hydrolases Signal peptide-binding domain 11
Formate/glycerate dehydrogenase catalytic domain-like ACT-like 11
Chaperone J-domain beta-beta-alpha zinc fingers 11
SurE-like Glutathione synthetase ATP-binding domain-like 11
HR1 repeat Protein kinase-like (PK-like) 11
Nucleotide-diphospho-sugar transferases ARM repeat 11
BSD domain-like BSD domain-like 11
Actin depolymerizing proteins SH3-domain 11
Dehydroquinate synthase-like Aminoacid dehydrogenase-like, N-terminal domain 11
EF-hand Calponin-homology domain, CH-domain 11
Ribonuclease H-like RuvA domain 2-like 11
RING/U-box UBA-like 11
Terpenoid cyclases/Protein prenyltransferases Terpenoid cyclases/Protein prenyltransferases 11
Carbon-nitrogen hydrolase Adenine nucleotide alpha hydrolases-like 11
Sialidases Oligoxyloglucan reducing end-specific cellobiohydrolase 11
FMN-linked oxidoreductases alpha-helical ferredoxin 11
PurM N-terminal domain-like PurM N-terminal domain-like 11
Class I glutamine amidotransferase-like Adenine nucleotide alpha hydrolases-like 11
ENTH/VHS domain I/LWEQ domain 11
HMA, heavy metal-associated domain Cu,Zn superoxide dismutase-like 11
Cysteine proteinases Calpain large subunit, middle domain (domain III) 11
PreATP-grasp domain PurM C-terminal domain-like 11
PX domain GTPase activation domain, GAP 11
PurM N-terminal domain-like Class I glutamine amidotransferase-like 11
Nqo1 FMN-binding domain-like Nqo1C-terminal domain-like 11
Ubiquitin-like Cap-Gly domain 11
PH domain-like Protein kinase-like (PK-like) 11
FGAM synthase PurL, linker domain Class I glutamine amidotransferase-like 11
NAD(P)-binding Rossmann-fold domains NAD(P)-binding Rossmann-fold domains 11
Galactose mutarotase-like Putative glucosidase YicI, C-terminal domain 11
FF domain FF domain 11
CoA-transferase family III (CaiB/BaiF) CoA-transferase family III (CaiB/BaiF) 11
Glycosyl hydrolase domain Putative glucosidase YicI, C-terminal domain 11
Concanavalin A-like lectins/glucanases P-domain of calnexin/calreticulin 11
S-adenosyl-L-methionine-dependent methyltransferases S-adenosyl-L-methionine-dependent methyltransferases 11
Lissencephaly-1 protein (Lis-1, PAF-AH alpha) N-terminal domain WD40 repeat-like 11
Cyclophilin-like Single hybrid motif 11
alpha/beta-Hydrolases Galactose-binding domain-like 11
Rudiment single hybrid motif ClpP/crotonase 11
Subtilisin-like Galactose-binding domain-like 11
Carbamoyl phosphate synthetase, small subunit N-terminal domain Carbamoyl phosphate synthetase, large subunit connection domain 11
TGS-like Class II aaRS and biotin synthetases 11
E set domains Glycosyl hydrolase domain 11
Chromo domain-like P-loop containing nucleoside triphosphate hydrolases 11
FAD/NAD(P)-binding domain Thioredoxin-like 11
GroEL apical domain-like SAICAR synthase-like 11
Rudiment single hybrid motif Cyclophilin-like 11
Ribosomal protein S5 domain 2-like Type II DNA topoisomerase 11
Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 11
Class II aaRS and biotin synthetases Anticodon-binding domain of PheRS 11
EF-hand PLC-like phosphodiesterases 11
PH domain-like GTPase activation domain, GAP 11
FYSH domain Hypothetical protein AF0491, middle domain 11
PH domain-like BEACH domain 11
PreATP-grasp domain PH0987 N-terminal domain-like 11
HisI-like ALDH-like 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) Nucleotide-binding domain 11
RNI-like RNI-like 11
TK C-terminal domain-like Ferredoxin reductase-like, C-terminal NADP-linked domain 11
Dehydroquinate synthase-like P-loop containing nucleoside triphosphate hydrolases 11
Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) ThrRS/AlaRS common domain 11
Nucleic acid-binding proteins "Winged helix" DNA-binding domain 11
PreATP-grasp domain post-HMGL domain-like 11
WD40 repeat-like Bacterial exopeptidase dimerisation domain 11
Double Clp-N motif P-loop containing nucleoside triphosphate hydrolases 11
FAD/NAD(P)-binding domain Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain 11
Glutathione synthetase ATP-binding domain-like PH0987 N-terminal domain-like 11
Cysteine proteinases UBA-like 11
Folate-binding domain Aminomethyltransferase beta-barrel domain 11
SAM/Pointed domain Protein kinase-like (PK-like) 11
S-adenosylmethionine synthetase S-adenosylmethionine synthetase 11
WD40 repeat-like Nitrous oxide reductase, N-terminal domain 11
Rudiment single hybrid motif PH0987 N-terminal domain-like 11
Tricorn protease domain 2 Quinoprotein alcohol dehydrogenase-like 11
Methyl-accepting chemotaxis protein (MCP) signaling domain ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 11
Trypsin-like serine proteases PDZ domain-like 11
PUA domain-like Ribosomal protein S5 domain 2-like 11
Cadherin-like Cadherin-like 11
WW domain FF domain 11
Staphylococcal nuclease Tudor/PWWP/MBT 11
P-loop containing nucleoside triphosphate hydrolases Class I glutamine amidotransferase-like 11
Terpenoid synthases Terpenoid synthases 11
WW domain Hect, E3 ligase catalytic domain 11
Adenine nucleotide alpha hydrolases-like DHS-like NAD/FAD-binding domain 11
Adenine nucleotide alpha hydrolases-like YjgF-like 11
P-loop containing nucleoside triphosphate hydrolases Hedgehog/intein (Hint) domain 11
BRCT domain P-loop containing nucleoside triphosphate hydrolases 11
EPT/RTPC-like NAD(P)-binding Rossmann-fold domains 11
Calponin-homology domain, CH-domain EB1 dimerisation domain-like 11
PH domain-like C2 domain (Calcium/lipid-binding domain, CaLB) 11
SH3-domain SAM/Pointed domain 11
GTPase activation domain, GAP RGC domain-like 11
Amidase signature (AS) enzymes PreATP-grasp domain 11
FabD/lysophospholipase-like Inosine monophosphate dehydrogenase (IMPDH) 11
PUA domain-like eIF1-like 11
UBC-like RING/U-box 11
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase HSP90 C-terminal domain 11
UDP-Glycosyltransferase/glycogen phosphorylase HAD-like 11
Taf5 N-terminal domain-like WD40 repeat-like 11
vWA-like Cysteine-rich domain 11
Concanavalin A-like lectins/glucanases WD40 repeat-like 11
Hedgehog/intein (Hint) domain Homing endonucleases 11
ENTH/VHS domain SH3-domain 11
P-loop containing nucleoside triphosphate hydrolases EF-hand 11
TGS-like ThrRS/AlaRS common domain 11
Galactose-binding domain-like Galactose-binding domain-like 11
Aldolase NAD(P)-binding Rossmann-fold domains 11
Methylglyoxal synthase-like Metallo-dependent hydrolases 11
Cysteine-rich domain Protein kinase-like (PK-like) 11
ARM repeat FKBP12-rapamycin-binding domain of FKBP-rapamycin-associated protein (FRAP) 11
ThrRS/AlaRS common domain Class II aaRS ABD-related 11
Metallo-dependent hydrolases Aspartate/ornithine carbamoyltransferase 11
SET domain WW domain 11
N-terminal domain of MutM-like DNA repair proteins S13-like H2TH domain 11
Activator of Hsp90 ATPase, Aha1 Bet v1-like 11
FKBP12-rapamycin-binding domain of FKBP-rapamycin-associated protein (FRAP) Protein kinase-like (PK-like) 11
beta-sandwich domain of Sec23/24 beta-beta-alpha zinc fingers 11
Nucleotidyltransferase Poly A polymerase C-terminal region-like 11
FAD/NAD(P)-binding domain 4Fe-4S ferredoxins 11
FMN-linked oxidoreductases Nucleotide-binding domain 11
SH3-domain CAD & PB1 domains 11
Quinoprotein alcohol dehydrogenase-like WD40 repeat-like 11
Methionyl-tRNA synthetase (MetRS), Zn-domain Nucleotidylyl transferase 11
HR1 repeat Cysteine-rich domain 11
NAD(P)-binding Rossmann-fold domains ACT-like 11
BAH domain P-loop containing nucleoside triphosphate hydrolases 11
GroES-like GroES-like 11
Nitrite and sulphite reductase 4Fe-4S domain-like Nitrite and sulphite reductase 4Fe-4S domain-like 11
Acetyl-CoA synthetase-like NAD(P)-binding Rossmann-fold domains 11
HMA, heavy metal-associated domain Metal cation-transporting ATPase, ATP-binding domain N 11
ISP transmembrane anchor ISP domain 11
F-box domain RCC1/BLIP-II 11
Carbamate kinase-like Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 11
Dom34/Pelota N-terminal domain-like L30e-like 11
UBA-like Thioredoxin-like 11
YbaK/ProRS associated domain Class II aaRS ABD-related 11
PLP-binding barrel Alanine racemase C-terminal domain-like 11
Pseudouridine synthase Cytidine deaminase-like 11
TGS-like Class II aaRS ABD-related 11
Ubiquitin-like Cysteine proteinases 11
Concanavalin A-like lectins/glucanases PH domain-like 11
Cytochrome c Cytochrome c1 subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase), transmembrane anchor 11
Protein kinase-like (PK-like) Class II aaRS and biotin synthetases 11
mRNA decapping enzyme DcpS N-terminal domain HIT-like 11
Ubiquitin-like Ubiquitin-like 11
RCC1/BLIP-II POZ domain 11
Class I glutamine amidotransferase-like Aspartate/ornithine carbamoyltransferase 11
DPP6 N-terminal domain-like WD40 repeat-like 11
Tex N-terminal region-like Ribonuclease H-like 11
Class II aaRS and biotin synthetases Translation proteins 11
Ras GEF GTPase activation domain, GAP 11
PLP-dependent transferases PLP-dependent transferases 11
Arp2/3 complex subunits Arp2/3 complex subunits 11
PH domain-like PLC-like phosphodiesterases 11
cAMP-binding domain-like F-box domain 11
C2 domain (Calcium/lipid-binding domain, CaLB) ARM repeat 11
POZ domain Skp1 dimerisation domain-like 11
Alpha subunit of glutamate synthase, C-terminal domain alpha-helical ferredoxin 11
Class I glutamine amidotransferase-like GMP synthetase C-terminal dimerisation domain 11
WD40 repeat-like Zn-dependent exopeptidases 11
ClpP/crotonase ClpP/crotonase 11
dsRNA-binding domain-like dsRNA-binding domain-like 11
WD40 repeat-like Tricorn protease N-terminal domain 11
Polo-box domain Polo-box domain 11
Histone-fold Histone-fold 11
Aldolase Single hybrid motif 11
"Winged helix" DNA-binding domain CheY-like 11
C2 domain (Calcium/lipid-binding domain, CaLB) Hect, E3 ligase catalytic domain 11
Thioredoxin-like eEF1-gamma domain 11
UBA-like Chaperone J-domain 11
Glycoside hydrolase/deacetylase Families 57/38 glycoside transferase middle domain 11
Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain Nucleotidylyl transferase 11
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase Type II DNA topoisomerase 11
Rudiment single hybrid motif Aldolase 11
Sec7 domain ARM repeat 11
Multidrug efflux transporter AcrB transmembrane domain Multidrug efflux transporter AcrB transmembrane domain 11
Riboflavin synthase domain-like Riboflavin synthase domain-like 11
PLC-like phosphodiesterases C2 domain (Calcium/lipid-binding domain, CaLB) 11
Glutathione synthetase ATP-binding domain-like Cyclophilin-like 11
"Winged helix" DNA-binding domain HRDC-like 11
HIT-like HIT-like 11
PH domain-like Ran binding protein zinc finger-like 11
FGAM synthase PurL, linker domain PurM N-terminal domain-like 11
GST C-terminal domain-like Nucleic acid-binding proteins 11
Ypt/Rab-GAP domain of gyp1p EF-hand 11
beta-N-acetylhexosaminidase-like domain (Trans)glycosidases 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) Alpha subunit of glutamate synthase, C-terminal domain 11
Zn2/Cys6 DNA-binding domain PYP-like sensor domain (PAS domain) 11
Metalloproteases ("zincins"), catalytic domain Mannose-binding lectins 11
Protein kinase-like (PK-like) Protein kinase-like (PK-like) 11
Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 WW domain 11
GAT-like domain Clathrin adaptor appendage domain 11
Adenine nucleotide alpha hydrolases-like Argininosuccinate synthetase, C-terminal domain 11
Histone-fold ARM repeat 11
UBC-like UBA-like 11
FGAM synthase PurL, linker domain PurM C-terminal domain-like 11
FabD/lysophospholipase-like Thiolase-like 11
beta-sandwich domain of Sec23/24 p53-like transcription factors 11
4'-phosphopantetheinyl transferase 4'-phosphopantetheinyl transferase 11
Heat shock protein 70kD (HSP70), peptide-binding domain Heat shock protein 70kD (HSP70), peptide-binding domain 11
Nucleic acid-binding proteins S-adenosyl-L-methionine-dependent methyltransferases 11
SAM/Pointed domain Ubiquitin-like 11
TPR-like Protein kinase-like (PK-like) 11
PreATP-grasp domain N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE) 11
Ribulose-phoshate binding barrel Tryptophan synthase beta subunit-like PLP-dependent enzymes 11
Regulator of G-protein signaling, RGS PX domain 11
PUA domain-like SWIB/MDM2 domain 11
Metallo-dependent phosphatases 5'-nucleotidase (syn. UDP-sugar hydrolase), C-terminal domain 11
Elongation factor TFIIS domain 2 Zinc beta-ribbon 11
PreATP-grasp domain ClpP/crotonase 11
4Fe-4S ferredoxins Formate dehydrogenase/DMSO reductase, domains 1-3 11
PurS-like PurM N-terminal domain-like 11
PX domain CAD & PB1 domains 11
Nucleic acid-binding proteins TPR-like 11
Class II aaRS ABD-related C-terminal domain of ProRS 11
Carbamoyl phosphate synthetase, small subunit N-terminal domain Metallo-dependent hydrolases 11
NAD-binding domain of HMG-CoA reductase Substrate-binding domain of HMG-CoA reductase 11
Class II aaRS and biotin synthetases Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) 11
Class I glutamine amidotransferase-like Methylglyoxal synthase-like 11
RNA-binding domain, RBD PABC (PABP) domain 11
PIN domain-like Nucleic acid-binding proteins 11
Rhodanese/Cell cycle control phosphatase (Phosphotyrosine protein) phosphatases II 11
PurS-like Class I glutamine amidotransferase-like 11
FAD-linked reductases, C-terminal domain 4Fe-4S ferredoxins 11
RING/U-box TRAF domain-like 11
UBA-like TPR-like 11
Dehydroquinate synthase-like EPT/RTPC-like 11
PH0987 N-terminal domain-like Single hybrid motif 11
N-terminal domain of eukaryotic peptide chain release factor subunit 1, ERF1 Translational machinery components 11
ENTH/VHS domain Clathrin adaptor appendage domain 11
N-terminal domain of eukaryotic peptide chain release factor subunit 1, ERF1 L30e-like 11
F-box domain L domain-like 11
2Fe-2S ferredoxin-like alpha-helical ferredoxin 11
UBA-like SMR domain-like 11
HMG-box HMG-box 11
Endosomal sorting complex assembly domain VPS28 C-terminal domain-like 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) PRTase-like 11
PH domain-like WD40 repeat-like 11
cAMP-binding domain-like FabD/lysophospholipase-like 11
Thioredoxin-like ERP29 C domain-like 11
NTF2-like UBA-like 11
Leucine zipper domain YAP1 redox domain 11
Supernatant protein factor (SPF), C-terminal domain PH domain-like 11
Prokaryotic type KH domain (KH-domain type II) Ribosomal protein S3 C-terminal domain 11
Pseudouridine synthase PUA domain-like 11
Glycoside hydrolase/deacetylase Galactose mutarotase-like 11
PreATP-grasp domain Aspartate/ornithine carbamoyltransferase 11
SAP domain Formin homology 2 domain (FH2 domain) 11
2Fe-2S ferredoxin-like Formate dehydrogenase/DMSO reductase, domains 1-3 11
N-terminal domain of adenylylcyclase associated protein, CAP C-terminal domain of adenylylcyclase associated protein 11
Ribonuclease H-like Ran binding protein zinc finger-like 11
Alpha subunit of glutamate synthase, C-terminal domain Nucleotide-binding domain 11
Class I glutamine amidotransferase-like Class II aaRS and biotin synthetases 11
Glutathione synthetase ATP-binding domain-like PurM C-terminal domain-like 11
N-terminal domain of alpha and beta subunits of F1 ATP synthase Homing endonucleases 11
L30e-like alpha/beta knot 11
Ribonuclease H-like HRDC-like 11
Carbamoyl phosphate synthetase, small subunit N-terminal domain PreATP-grasp domain 11
Carbamoyl phosphate synthetase, small subunit N-terminal domain Methylglyoxal synthase-like 11
Ribonuclease H-like Ribonuclease H-like 11
Ran binding protein zinc finger-like Ran binding protein zinc finger-like 11
HAD-like HAD-like 11
FYVE/PHD zinc finger GroEL apical domain-like 11
Inosine monophosphate dehydrogenase (IMPDH) Thioesterase/thiol ester dehydrase-isomerase 11
Cysteine proteinases Ribonuclease H-like 11
Chaperone J-domain Sec63 N-terminal domain-like 11
Hypothetical protein c14orf129, hspc210 TPR-like 11
Acetyl-CoA synthetase-like ACP-like 11
P-loop containing nucleoside triphosphate hydrolases PRTase-like 11
Protein kinase-like (PK-like) WD40 repeat-like 11
Amidase signature (AS) enzymes Cyclophilin-like 11
Carbamate kinase-like NAD(P)-binding Rossmann-fold domains 11
RNA-binding domain, RBD Ran binding protein zinc finger-like 11
Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 11
Globin-like Ferredoxin reductase-like, C-terminal NADP-linked domain 11
TK C-terminal domain-like Riboflavin synthase domain-like 11
NagB/RpiA/CoA transferase-like D-ribose-5-phosphate isomerase (RpiA), lid domain 11
SH3-domain PH domain-like 11
L domain-like Outer arm dynein light chain 1 11
Nqo1 FMN-binding domain-like Nqo1 middle domain-like 11
DBL homology domain (DH-domain) CAD & PB1 domains 11
E set domains (Trans)glycosidases 11
L9 N-domain-like Ribonuclease H-like 11
Calpain large subunit, middle domain (domain III) Calpain large subunit, middle domain (domain III) 11
PUA domain-like PUA domain-like 11
Methyl-accepting chemotaxis protein (MCP) signaling domain CheY-like 11
Eukaryotic RPB5 N-terminal domain RPB5-like RNA polymerase subunit 11
UROD/MetE-like UROD/MetE-like 11
TPR-like "Winged helix" DNA-binding domain 11
NAD(P)-binding Rossmann-fold domains Succinyl-CoA synthetase domains 11
SET domain SET domain 11
L domain-like UBA-like 11
PX domain PH domain-like 11
FAD-linked reductases, C-terminal domain Thioredoxin-like 11
Siroheme synthase middle domains-like Tetrapyrrole methylase 11
TPR-like RNA-binding domain, RBD 11
Glutathione synthetase ATP-binding domain-like Aldolase 11
Translation initiation factor 2 beta, aIF2beta, N-terminal domain ARM repeat 11
PEP carboxykinase N-terminal domain PEP carboxykinase-like 11
PreATP-grasp domain PurM N-terminal domain-like 11
Putative DNA-binding domain Class II aaRS and biotin synthetases 11
GST C-terminal domain-like eEF-1beta-like 11
SMAD/FHA domain SMAD/FHA domain 11
Thioredoxin-like Galactose-binding domain-like 11
Amidase signature (AS) enzymes PH0987 N-terminal domain-like 11
Carbamoyl phosphate synthetase, small subunit N-terminal domain Aspartate/ornithine carbamoyltransferase 11
Ubiquitin-like Zn-binding ribosomal proteins 11
Ribosomal protein S5 domain 2-like DNA mismatch repair protein MutL 11
Rudiment single hybrid motif PurM N-terminal domain-like 11
P-loop containing nucleoside triphosphate hydrolases Hypothetical protein YjiA, C-terminal domain 11
Rap30/74 interaction domains "Winged helix" DNA-binding domain 11
Actin-like ATPase domain CV3147-like 11
PurM C-terminal domain-like Class I glutamine amidotransferase-like 11
cAMP-binding domain-like RNI-like 11
Zinc-binding domain of translation initiation factor 2 beta ARM repeat 11
Ribokinase-like Heme oxygenase-like 11
TATA-box binding protein-like TATA-box binding protein-like 11
Glutathione synthetase ATP-binding domain-like PurM N-terminal domain-like 11
FYVE/PHD zinc finger Rabenosyn-5 Rab-binding domain-like 11
Families 57/38 glycoside transferase middle domain Galactose mutarotase-like 11
"Winged helix" DNA-binding domain Regulator of G-protein signaling, RGS 11
(Trans)glycosidases Putative glucosidase YicI, C-terminal domain 11
Calponin-homology domain, CH-domain RGC domain-like 11
RNA-binding domain, RBD SET domain 11
PurM C-terminal domain-like PurM C-terminal domain-like 11
PreATP-grasp domain Metallo-dependent hydrolases 11
ENTH/VHS domain RNA-binding domain, RBD 11
WD40 repeat-like Cysteine proteinases 11
Class I glutamine amidotransferase-like Glutathione synthetase ATP-binding domain-like 11
Dcp2 domain-like Nudix 11
ARM repeat Homo-oligomeric flavin-containing Cys decarboxylases, HFCD 11
Methionyl-tRNA synthetase (MetRS), Zn-domain Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 11
Activating enzymes of the ubiquitin-like proteins Activating enzymes of the ubiquitin-like proteins 11
Tex N-terminal region-like RuvA domain 2-like 11
Nucleotidylyl transferase An anticodon-binding domain of class I aminoacyl-tRNA synthetases 11
PH domain-like BSD domain-like 11
RNA-binding domain, RBD DPP6 N-terminal domain-like 11
6-phosphogluconate dehydrogenase C-terminal domain-like 6-phosphogluconate dehydrogenase C-terminal domain-like 11
BRCT domain DNA/RNA polymerases 11
PH domain-like CAD & PB1 domains 11
TRAF domain-like Cysteine proteinases 11
PurS-like FGAM synthase PurL, linker domain 11
FYVE/PHD zinc finger SAICAR synthase-like 11
GroEL equatorial domain-like GroEL equatorial domain-like 11
Galactose-binding domain-like Galactose mutarotase-like 11
Kelch motif POZ domain 11
Nucleotidylyl transferase Alpha-L RNA-binding motif 11
PK beta-barrel domain-like PK C-terminal domain-like 11
EPT/RTPC-like P-loop containing nucleoside triphosphate hydrolases 11
ENTH/VHS domain FYVE/PHD zinc finger 11
Ribosomal protein L7/12, oligomerisation (N-terminal) domain ClpS-like 11
FabD/lysophospholipase-like 4'-phosphopantetheinyl transferase 11
Actin depolymerizing proteins Actin depolymerizing proteins 11
Protein kinase-like (PK-like) Polo-box domain 11
Cysteine-rich domain Cysteine-rich domain 11
TPR-like PIN domain-like 11
Ribosomal L27 protein-like Eukaryotic type KH-domain (KH-domain type I) 11
Calponin-homology domain, CH-domain GTPase activation domain, GAP 11
SMAD/FHA domain RING/U-box 11
YbaK/ProRS associated domain Class II aaRS and biotin synthetases 11
Metallo-hydrolase/oxidoreductase Metallo-hydrolase/oxidoreductase 11
Zinc hairpin stack RING/U-box 11
Nqo1 middle domain-like Nqo1C-terminal domain-like 11
all-alpha NTP pyrophosphatases ALDH-like 11
alpha-helical ferredoxin Nucleotide-binding domain 11
NAD(P)-binding Rossmann-fold domains Siroheme synthase middle domains-like 11
Clathrin heavy-chain terminal domain ARM repeat 11
Inhibitor of apoptosis (IAP) repeat Inhibitor of apoptosis (IAP) repeat 11
NAD(P)-binding Rossmann-fold domains Thiolase-like 11
Homing endonucleases C-terminal domain of alpha and beta subunits of F1 ATP synthase 11
TPR-like RNI-like 11
Cyclophilin-like PH0987 N-terminal domain-like 11
Carbamate kinase-like PUA domain-like 11
Thiamin diphosphate-binding fold (THDP-binding) Flavoproteins 11
Periplasmic binding protein-like II Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain 11
WD40 repeat-like Ribonuclease H-like 11
Ammonium transporter Ammonium transporter 11
Dehydroquinate synthase-like Aldolase 11
Pyruvate-ferredoxin oxidoreductase, PFOR, domain III Ferredoxin reductase-like, C-terminal NADP-linked domain 11
F-box domain Clavaminate synthase-like 11
UBC-like Class II aaRS and biotin synthetases 11
Zn2/Cys6 DNA-binding domain Leucine zipper domain 11
Chaperone J-domain CSL zinc finger 11
IlvD/EDD N-terminal domain-like LeuD/IlvD-like 11
Quinoprotein alcohol dehydrogenase-like Protein kinase-like (PK-like) 11
VPS9 domain Ankyrin repeat 11
Supernatant protein factor (SPF), C-terminal domain Oxysterol-binding protein-like 11
ISP domain Bet v1-like 11
S-adenosyl-L-methionine-dependent methyltransferases Galactose oxidase, central domain 11
6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase, HPPK Dihydropteroate synthetase-like 11
Concanavalin A-like lectins/glucanases BEACH domain 11
Rudiment single hybrid motif post-HMGL domain-like 11
Galactose mutarotase-like Six-hairpin glycosidases 11
Aldolase Aminoacid dehydrogenase-like, N-terminal domain 11
Ankyrin repeat RCC1/BLIP-II 11
Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain 11
P-loop containing nucleoside triphosphate hydrolases vWA-like 11
ARM repeat TPR-like 11
Eukaryotic DNA topoisomerase I, N-terminal DNA-binding fragment DNA breaking-rejoining enzymes 11
FAD/NAD(P)-binding domain Cytochrome b5-like heme/steroid binding domain 11
Adenine nucleotide alpha hydrolases-like GMP synthetase C-terminal dimerisation domain 11
P-loop containing nucleoside triphosphate hydrolases SH3-domain 11
Thiolase-like 4'-phosphopantetheinyl transferase 11
TPR-like F-box domain 11
DNA polymerase beta, N-terminal domain-like Restriction endonuclease-like 11
Class I glutamine amidotransferase-like Metallo-dependent hydrolases 11

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