SUPERFAMILY 1.75 HMM library and genome assignments server

Domain combination pairs in Rhodospirillum photometricum DSM 122

All pairs of domain combinations at the superfamily level are listed here.
The identification of domain pairs does not account for the possibility of non-contiguous domains. Inserted, or interlaced, domains are seen as having a simple pair ordering.

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Adjacent domain pairs graph

Graph of adjacent domain pairs.


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Domain combination pairs

629 domain combination pairs.
Click on a column heading to sort that column, or the 'View' button to see domain architetures for that domain pair combination.

Superfamily (N) Superfamily (C) Number of occurrances Number unique
Homodimeric domain of signal transducing histidine kinase ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 5034
PYP-like sensor domain (PAS domain) ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 3326
PYP-like sensor domain (PAS domain) PYP-like sensor domain (PAS domain) 3225
PYP-like sensor domain (PAS domain) Homodimeric domain of signal transducing histidine kinase 3124
P-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases 2112
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase CheY-like 1614
PYP-like sensor domain (PAS domain) Nucleotide cyclase 1614
Homodimeric domain of signal transducing histidine kinase CheY-like 1513
"Winged helix" DNA-binding domain Periplasmic binding protein-like II 152
CheY-like Histidine-containing phosphotransfer domain, HPT domain 1412
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase Histidine-containing phosphotransfer domain, HPT domain 1210
CheY-like C-terminal effector domain of the bipartite response regulators 123
Homodimeric domain of signal transducing histidine kinase Histidine-containing phosphotransfer domain, HPT domain 1210
Multidrug resistance efflux transporter EmrE Multidrug resistance efflux transporter EmrE 113
ABC transporter transmembrane region P-loop containing nucleoside triphosphate hydrolases 113
Nucleotide cyclase EAL domain-like 109
PYP-like sensor domain (PAS domain) CheY-like 1010
P-loop containing nucleoside triphosphate hydrolases Homeodomain-like 107
HAMP domain-like ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 86
P-loop containing nucleoside triphosphate hydrolases Translation proteins 85
PreATP-grasp domain Glutathione synthetase ATP-binding domain-like 85
NAD(P)-binding Rossmann-fold domains 6-phosphogluconate dehydrogenase C-terminal domain-like 83
HAMP domain-like Homodimeric domain of signal transducing histidine kinase 86
Actin-like ATPase domain Actin-like ATPase domain 84
Multidrug efflux transporter AcrB transmembrane domain Multidrug efflux transporter AcrB transmembrane domain 74
Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) 76
Acyl-CoA dehydrogenase NM domain-like Acyl-CoA dehydrogenase C-terminal domain-like 74
Thiolase-like Thiolase-like 72
PYP-like sensor domain (PAS domain) EAL domain-like 77
HAMP domain-like Methyl-accepting chemotaxis protein (MCP) signaling domain 73
Glutathione synthetase ATP-binding domain-like Rudiment single hybrid motif 64
Nucleotidylyl transferase Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 65
Calcium ATPase, transduction domain A HAD-like 65
NAD(P)-binding Rossmann-fold domains Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 63
TPR-like TPR-like 65
GroES-like NAD(P)-binding Rossmann-fold domains 63
PreATP-grasp domain Rudiment single hybrid motif 53
Adenine nucleotide alpha hydrolases-like Adenine nucleotide alpha hydrolases-like 51
CheY-like P-loop containing nucleoside triphosphate hydrolases 52
P-loop containing nucleoside triphosphate hydrolases EF-G C-terminal domain-like 53
Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains Multidrug efflux transporter AcrB transmembrane domain 52
P-loop containing nucleoside triphosphate hydrolases MOP-like 51
CheY-like CheY-like 55
CheY-like Homeodomain-like 52
Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains Multidrug efflux transporter AcrB transmembrane domain 52
CheY-like Nucleotide cyclase 55
P-loop containing nucleoside triphosphate hydrolases Class I glutamine amidotransferase-like 52
Translation proteins EF-G C-terminal domain-like 53
Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains 52
Chemotaxis receptor methyltransferase CheR, N-terminal domain S-adenosyl-L-methionine-dependent methyltransferases 53
FAD/NAD(P)-binding domain FAD-linked reductases, C-terminal domain 53
P-loop containing nucleoside triphosphate hydrolases Ribosomal protein S5 domain 2-like 54
Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains 52
Sigma2 domain of RNA polymerase sigma factors Sigma3 and sigma4 domains of RNA polymerase sigma factors 52
Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains 52
Calcium ATPase, transduction domain A Calcium ATPase, transmembrane domain M 55
Thiamin diphosphate-binding fold (THDP-binding) TK C-terminal domain-like 55
MurD-like peptide ligases, catalytic domain MurD-like peptide ligases, peptide-binding domain 54
CheY-like HD-domain/PDEase-like 42
Homodimeric domain of signal transducing histidine kinase CheW-like 44
E set domains (Trans)glycosidases 42
PYP-like sensor domain (PAS domain) Histidine-containing phosphotransfer domain, HPT domain 44
Sensory domain-like Methyl-accepting chemotaxis protein (MCP) signaling domain 43
PurM N-terminal domain-like PurM C-terminal domain-like 43
P-loop containing nucleoside triphosphate hydrolases TPR-like 44
GAF domain-like P-loop containing nucleoside triphosphate hydrolases 44
Homeodomain-like Tetracyclin repressor-like, C-terminal domain 41
HAMP domain-like PYP-like sensor domain (PAS domain) 44
ACT-like ACT-like 44
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase CheW-like 44
Triger factor/SurA peptide-binding domain-like FKBP-like 44
E set domains Glycosyl hydrolase domain 42
Nucleic acid-binding proteins Nucleic acid-binding proteins 44
HAD-like Calcium ATPase, transmembrane domain M 44
Histidine-containing phosphotransfer domain, HPT domain CheW-like 44
PYP-like sensor domain (PAS domain) GAF domain-like 44
cAMP-binding domain-like "Winged helix" DNA-binding domain 42
CheY-like Methylesterase CheB, C-terminal domain 42
Translation proteins EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 42
Phosphohistidine domain Phosphoenolpyruvate/pyruvate domain 44
Formate/glycerate dehydrogenase catalytic domain-like NAD(P)-binding Rossmann-fold domains 44
ClpP/crotonase ClpP/crotonase 42
EF-G C-terminal domain-like EF-G C-terminal domain-like 42
(Trans)glycosidases Glycosyl hydrolase domain 42
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase Ribosomal protein S5 domain 2-like 44
Aminoacid dehydrogenase-like, N-terminal domain NAD(P)-binding Rossmann-fold domains 43
HlyD-like secretion proteins HlyD-like secretion proteins 32
GAF domain-like Homodimeric domain of signal transducing histidine kinase 33
Methyl-accepting chemotaxis protein (MCP) signaling domain PilZ domain-like 33
LuxS/MPP-like metallohydrolase LuxS/MPP-like metallohydrolase 32
Aldolase 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain 32
Cobalamin (vitamin B12)-dependent enzymes Cobalamin (vitamin B12)-binding domain 32
Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain Phosphohistidine domain 33
Homeodomain-like Homeodomain-like 32
"Winged helix" DNA-binding domain Dimeric alpha+beta barrel 31
Nucleic acid-binding proteins RuvA domain 2-like 33
Aldolase post-HMGL domain-like 32
Glutathione synthetase ATP-binding domain-like Single hybrid motif 33
RuBisCO, large subunit, small (N-terminal) domain RuBisCo, C-terminal domain 31
Lysozyme-like beta-lactamase/transpeptidase-like 33
NAD(P)-binding Rossmann-fold domains ACT-like 33
Glutamine synthetase, N-terminal domain Glutamine synthetase/guanido kinase 31
FAD-binding/transporter-associated domain-like FAD-linked oxidases, C-terminal domain 32
Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain Phosphoenolpyruvate/pyruvate domain 33
P-loop containing nucleoside triphosphate hydrolases post-AAA+ oligomerization domain-like 32
ValRS/IleRS/LeuRS editing domain Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 33
GAF domain-like HD-domain/PDEase-like 32
Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like 33
PLP-binding barrel Alanine racemase C-terminal domain-like 32
TPR-like UDP-Glycosyltransferase/glycogen phosphorylase 31
CBS-domain pair FAD-binding/transporter-associated domain-like 31
ValRS/IleRS/LeuRS editing domain Nucleotidylyl transferase 33
Composite domain of metallo-dependent hydrolases Metallo-dependent hydrolases 33
FAD/NAD(P)-binding domain FAD/NAD-linked reductases, dimerisation (C-terminal) domain 32
Rudiment single hybrid motif Single hybrid motif 33
Thioredoxin-like GST C-terminal domain-like 31
Class II aaRS and biotin synthetases Class II aaRS ABD-related 32
P-loop containing nucleoside triphosphate hydrolases "Winged helix" DNA-binding domain 32
GAF domain-like Homeodomain-like 33
CorA soluble domain-like Magnesium transport protein CorA, transmembrane region 22
Nucleotide-diphospho-sugar transferases Trimeric LpxA-like enzymes 21
PreATP-grasp domain Single hybrid motif 22
HD-domain/PDEase-like HD-domain/PDEase-like 21
Adenine nucleotide alpha hydrolases-like DHS-like NAD/FAD-binding domain 22
Translation proteins Ribosomal protein S5 domain 2-like 21
Rhodanese/Cell cycle control phosphatase Rhodanese/Cell cycle control phosphatase 22
CheW-like CheW-like 22
Thiamin diphosphate-binding fold (THDP-binding) 4Fe-4S ferredoxins 22
Chaperone J-domain HSP40/DnaJ peptide-binding domain 22
Mechanosensitive channel protein MscS (YggB), transmembrane region Sm-like ribonucleoproteins 22
P-loop containing nucleoside triphosphate hydrolases Hypothetical protein YjiA, C-terminal domain 21
Enolase N-terminal domain-like Enolase C-terminal domain-like 22
Nucleic acid-binding proteins P-loop containing nucleoside triphosphate hydrolases 22
Nucleotidyltransferase Poly A polymerase C-terminal region-like 22
Methyl-accepting chemotaxis protein (MCP) signaling domain Hemerythrin-like 22
Thiamin diphosphate-binding fold (THDP-binding) DHS-like NAD/FAD-binding domain 21
Riboflavin synthase domain-like Ferredoxin reductase-like, C-terminal NADP-linked domain 22
HMA, heavy metal-associated domain Calcium ATPase, transmembrane domain M 22
Formate/glycerate dehydrogenase catalytic domain-like ACT-like 22
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase Type II DNA topoisomerase 22
Type II DNA topoisomerase GyrA/ParC C-terminal domain-like 22
Metal cation-transporting ATPase, ATP-binding domain N HAD-like 22
Histidine-containing phosphotransfer domain, HPT domain Nucleotide cyclase 22
FAD/NAD(P)-binding domain Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain 22
2Fe-2S ferredoxin-like 4Fe-4S ferredoxins 22
N-terminal domain of alpha and beta subunits of F1 ATP synthase C-terminal domain of alpha and beta subunits of F1 ATP synthase 21
GAF domain-like Nucleotide cyclase 22
P-loop containing nucleoside triphosphate hydrolases Toll/Interleukin receptor TIR domain 22
NAD(P)-binding Rossmann-fold domains NAD(P)-binding Rossmann-fold domains 22
Methyl-accepting chemotaxis protein (MCP) signaling domain Methyl-accepting chemotaxis protein (MCP) signaling domain 22
ParB/Sulfiredoxin KorB DNA-binding domain-like 21
Nqo1 FMN-binding domain-like Nqo1 middle domain-like 22
CheW-like CheY-like 22
ThrRS/AlaRS common domain Class II aaRS and biotin synthetases 22
MurE/MurF N-terminal domain MurD-like peptide ligases, catalytic domain 22
Folate-binding domain Aminomethyltransferase beta-barrel domain 22
NAD(P)-binding Rossmann-fold domains Succinyl-CoA synthetase domains 22
Thiamin diphosphate-binding fold (THDP-binding) Pyruvate-ferredoxin oxidoreductase, PFOR, domain III 22
Trypsin-like serine proteases PDZ domain-like 22
Mechanosensitive channel protein MscS (YggB), transmembrane region Mechanosensitive channel protein MscS (YggB), C-terminal domain 22
TK C-terminal domain-like Pyruvate-ferredoxin oxidoreductase, PFOR, domain III 22
DNA ligase/mRNA capping enzyme, catalytic domain Nucleic acid-binding proteins 22
P-loop containing nucleoside triphosphate hydrolases C-terminal domain of alpha and beta subunits of F1 ATP synthase 21
Phosphoglucomutase, first 3 domains Phosphoglucomutase, C-terminal domain 22
Nqo1 middle domain-like Nqo1C-terminal domain-like 22
Phosphoglucomutase, first 3 domains Phosphoglucomutase, first 3 domains 22
Ribosomal protein S5 domain 2-like Ribonuclease PH domain 2-like 22
Alpha subunit of glutamate synthase, C-terminal domain FMN-linked oxidoreductases 22
Pheromone-binding domain of LuxR-like quorum-sensing transcription factors C-terminal effector domain of the bipartite response regulators 21
Nqo1 FMN-binding domain-like Nqo1C-terminal domain-like 22
Alpha-L RNA-binding motif Pseudouridine synthase 21
Nucleotidyltransferase Nucleotidyltransferase substrate binding subunit/domain 22
HAMP domain-like CheY-like 22
EF-G C-terminal domain-like Ribosomal protein S5 domain 2-like 21
N-terminal domain of alpha and beta subunits of F1 ATP synthase P-loop containing nucleoside triphosphate hydrolases 21
alpha-helical ferredoxin Nucleotide-binding domain 22
Nucleotidyltransferase ACT-like 22
GAF domain-like ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 22
Calcium ATPase, transmembrane domain M Metal cation-transporting ATPase, ATP-binding domain N 22
tRNA-binding arm Class II aaRS and biotin synthetases 22
post-HMGL domain-like 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain 21
"Winged helix" DNA-binding domain GAF domain-like 21
NagB/RpiA/CoA transferase-like NagB/RpiA/CoA transferase-like 21
P-loop containing nucleoside triphosphate hydrolases EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 21
Nucleotidylyl transferase An anticodon-binding domain of class I aminoacyl-tRNA synthetases 21
Thioesterase/thiol ester dehydrase-isomerase Thioesterase/thiol ester dehydrase-isomerase 21
HMA, heavy metal-associated domain HAD-like 22
Periplasmic binding protein-like II PYP-like sensor domain (PAS domain) 22
HMA, heavy metal-associated domain Calcium ATPase, transduction domain A 22
ACT-like Formyltransferase 21
Ribosomal protein S5 domain 2-like Type II DNA topoisomerase 22
PDZ domain-like ClpP/crotonase 21
Zn-dependent exopeptidases Bacterial exopeptidase dimerisation domain 21
HSP40/DnaJ peptide-binding domain HSP40/DnaJ peptide-binding domain 22
Translation proteins SH3-like domain Nucleic acid-binding proteins 22
Glutathione synthetase ATP-binding domain-like Succinyl-CoA synthetase domains 22
TrkA C-terminal domain-like TrkA C-terminal domain-like 22
Calcium ATPase, transduction domain A Metal cation-transporting ATPase, ATP-binding domain N 22
Sm-like ribonucleoproteins Mechanosensitive channel protein MscS (YggB), C-terminal domain 22
Penicillin binding protein dimerisation domain beta-lactamase/transpeptidase-like 22
Double Clp-N motif P-loop containing nucleoside triphosphate hydrolases 22
Globin-like Methyl-accepting chemotaxis protein (MCP) signaling domain 22
Translation proteins ThrRS/AlaRS common domain 22
beta-Roll beta-Roll 22
FabD/lysophospholipase-like Probable ACP-binding domain of malonyl-CoA ACP transacylase 22
P-loop containing nucleoside triphosphate hydrolases TRCF domain-like 11
Transcription factor NusA, N-terminal domain Nucleic acid-binding proteins 11
PKD domain PKD domain 11
Ribonuclease H-like DNA/RNA polymerases 11
GreA transcript cleavage protein, N-terminal domain FKBP-like 11
NAD(P)-binding Rossmann-fold domains ClpP/crotonase 11
GAF domain-like Phosphohistidine domain 11
Photosystem II reaction centre subunit H, transmembrane region PRC-barrel domain 11
Metallo-dependent phosphatases 5'-nucleotidase (syn. UDP-sugar hydrolase), C-terminal domain 11
NAD(P)-binding Rossmann-fold domains LDH C-terminal domain-like 11
GAF domain-like EAL domain-like 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) SIS domain 11
Precorrin-8X methylmutase CbiC/CobH Tetrapyrrole methylase 11
Insert subdomain of RNA polymerase alpha subunit C-terminal domain of RNA polymerase alpha subunit 11
"Winged helix" DNA-binding domain PLP-dependent transferases 11
Pectin lyase-like Sialidases 11
Formate/glycerate dehydrogenase catalytic domain-like Serine metabolism enzymes domain 11
Phospholipase D/nuclease P-loop containing nucleoside triphosphate hydrolases 11
Actin-like ATPase domain Heat shock protein 70kD (HSP70), C-terminal subdomain 11
TGS-like Class II aaRS ABD-related 11
P-loop containing nucleoside triphosphate hydrolases Myosin rod fragments 11
Class II aaRS and biotin synthetases GAD domain-like 11
cAMP-binding domain-like CBS-domain pair 11
RNase III domain-like dsRNA-binding domain-like 11
RuvA domain 2-like RuvA domain 2-like 11
Periplasmic binding protein-like II Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain 11
Composite domain of metallo-dependent hydrolases Composite domain of metallo-dependent hydrolases 11
Sensory domain-like Homodimeric domain of signal transducing histidine kinase 11
beta-lactamase/transpeptidase-like Penicillin-binding protein associated domain 11
GroEL-intermediate domain like GroEL apical domain-like 11
post-HMGL domain-like Single hybrid motif 11
Thioredoxin-like Nqo1 middle domain-like 11
Class II aaRS and biotin synthetases Translation proteins 11
Poly A polymerase C-terminal region-like ACT-like 11
Rudiment single hybrid motif post-HMGL domain-like 11
Glutathione synthetase ATP-binding domain-like Glutathione synthetase ATP-binding domain-like 11
Tex N-terminal region-like Nucleic acid-binding proteins 11
Nicotinate/Quinolinate PRTase N-terminal domain-like Nicotinate/Quinolinate PRTase C-terminal domain-like 11
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase HSP90 C-terminal domain 11
Putative DNA-binding domain mu transposase, C-terminal domain 11
Nucleotidylyl transferase tRNA-binding arm 11
"Winged helix" DNA-binding domain MOP-like 11
Nucleic acid-binding proteins Prokaryotic type KH domain (KH-domain type II) 11
MgtE N-terminal domain-like Magnesium transport protein CorA, transmembrane region 11
Glutathione synthetase ATP-binding domain-like post-HMGL domain-like 11
Nucleotidyltransferase Nucleotidyltransferase 11
Heme-dependent peroxidases Heme-dependent peroxidases 11
Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain Nucleotidylyl transferase 11
CBS-domain pair Inosine monophosphate dehydrogenase (IMPDH) 11
PUA domain-like P-loop containing nucleoside triphosphate hydrolases 11
PreATP-grasp domain PreATP-grasp domain 11
Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases tRNA-binding arm 11
DNA repair protein MutS, domain I DNA repair protein MutS, domain II 11
HAMP domain-like Nucleotide cyclase 11
Insert subdomain of RNA polymerase alpha subunit RBP11-like subunits of RNA polymerase 11
Pectin lyase-like PKD domain 11
Sensory domain-like CheY-like 11
HD-domain/PDEase-like ACT-like 11
NAD(P)-binding Rossmann-fold domains Glutamyl tRNA-reductase dimerization domain 11
PIN domain-like DNA/RNA polymerases 11
GAF domain-like Phosphoenolpyruvate/pyruvate domain 11
IlvD/EDD N-terminal domain-like LeuD/IlvD-like 11
RuvA domain 2-like DNA helicase RuvA subunit, C-terminal domain 11
FAD/NAD(P)-binding domain Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain 11
P-loop containing nucleoside triphosphate hydrolases PRTase-like 11
Fic-like "Winged helix" DNA-binding domain 11
N-terminal domain of DnaB helicase P-loop containing nucleoside triphosphate hydrolases 11
Succinyl-CoA synthetase domains Succinyl-CoA synthetase domains 11
TGS-like ACT-like 11
S-adenosyl-L-methionine-dependent methyltransferases PYP-like sensor domain (PAS domain) 11
all-alpha NTP pyrophosphatases all-alpha NTP pyrophosphatases 11
Barwin-like endoglucanases Sporulation related repeat 11
Class II aaRS and biotin synthetases C-terminal domain of transcriptional repressors 11
Sensory domain-like ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 11
MurCD N-terminal domain MurD-like peptide ligases, peptide-binding domain 11
Phoshotransferase/anion transport protein Phosphohistidine domain 11
PPK N-terminal domain-like PHP14-like 11
RmlC-like cupins Homeodomain-like 11
Probable ACP-binding domain of malonyl-CoA ACP transacylase NAD(P)-binding Rossmann-fold domains 11
Hypothetical protein SAV1430 Fe-S cluster assembly (FSCA) domain-like 11
Bacterial muramidases Lysozyme-like 11
Rho N-terminal domain-like P-loop containing nucleoside triphosphate hydrolases 11
HRDC-like HRDC-like 11
Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 11
Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) ThrRS/AlaRS common domain 11
N-terminal domain of MutM-like DNA repair proteins S13-like H2TH domain 11
Nitrite and sulphite reductase 4Fe-4S domain-like Nitrite and sulphite reductase 4Fe-4S domain-like 11
Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain 11
Resolvase-like Homeodomain-like 11
DNA repair protein MutS, domain II DNA repair protein MutS, domain III 11
Terpenoid cyclases/Protein prenyltransferases Terpenoid cyclases/Protein prenyltransferases 11
PEP carboxykinase N-terminal domain PEP carboxykinase-like 11
Translation proteins Translation proteins 11
Radical SAM enzymes Nitrogenase accessory factor-like 11
DNA repair protein MutS, domain I DNA repair protein MutS, domain III 11
NAD(P)-binding Rossmann-fold domains MurD-like peptide ligases, peptide-binding domain 11
"Winged helix" DNA-binding domain "Winged helix" DNA-binding domain 11
Protein kinase-like (PK-like) P-loop containing nucleoside triphosphate hydrolases 11
Prokaryotic type KH domain (KH-domain type II) Ribosomal protein S3 C-terminal domain 11
DNA/RNA polymerases Lesion bypass DNA polymerase (Y-family), little finger domain 11
Diaminopimelate epimerase-like Diaminopimelate epimerase-like 11
Actin-like ATPase domain HD-domain/PDEase-like 11
Ribosomal protein L7/12, oligomerisation (N-terminal) domain ClpS-like 11
Phoshotransferase/anion transport protein HPr-like 11
PreATP-grasp domain Methylglyoxal synthase-like 11
Glutamyl tRNA-reductase catalytic, N-terminal domain Glutamyl tRNA-reductase dimerization domain 11
Chaperone J-domain DnaJ/Hsp40 cysteine-rich domain 11
DNA clamp DNA clamp 11
Trigger factor ribosome-binding domain FKBP-like 11
ABC transporter transmembrane region Myosin rod fragments 11
P-loop containing nucleoside triphosphate hydrolases Pre-protein crosslinking domain of SecA 11
Serine metabolism enzymes domain ACT-like 11
Transmembrane di-heme cytochromes Cytochrome c 11
Herpes virus serine proteinase, assemblin Major capsid protein gp5 11
Methionine synthase domain Methionine synthase activation domain-like 11
GIY-YIG endonuclease C-terminal UvrC-binding domain of UvrB 11
Adenine nucleotide alpha hydrolases-like Argininosuccinate synthetase, C-terminal domain 11
Ribokinase-like Nucleotidylyl transferase 11
Methyl-accepting chemotaxis protein (MCP) signaling domain Periplasmic binding protein-like II 11
FAD/NAD(P)-binding domain Aminomethyltransferase beta-barrel domain 11
Ribosomal protein L6 Ribosomal protein L6 11
Regulatory protein AraC Homeodomain-like 11
Aminoacid dehydrogenase-like, N-terminal domain Isocitrate/Isopropylmalate dehydrogenase-like 11
PIN domain-like 5' to 3' exonuclease, C-terminal subdomain 11
Nucleotide-binding domain Riboflavin synthase domain-like 11
Fe-S cluster assembly (FSCA) domain-like P-loop containing nucleoside triphosphate hydrolases 11
Tetrapyrrole methylase S-adenosyl-L-methionine-dependent methyltransferases 11
Adenine nucleotide alpha hydrolases-like GMP synthetase C-terminal dimerisation domain 11
YlxR-like L30e-like 11
L domain-like Toll/Interleukin receptor TIR domain 11
S-adenosyl-L-methionine-dependent methyltransferases Nucleotide-diphospho-sugar transferases 11
Glutamine synthetase/guanido kinase GatB/YqeY motif 11
Glutamyl tRNA-reductase catalytic, N-terminal domain NAD(P)-binding Rossmann-fold domains 11
2Fe-2S ferredoxin-like alpha-helical ferredoxin 11
DNA ligase/mRNA capping enzyme, catalytic domain BRCT domain 11
Pentapeptide repeat-like Pentapeptide repeat-like 11
P-loop containing nucleoside triphosphate hydrolases TGS-like 11
HPr-like Phosphohistidine domain 11
Rad51 N-terminal domain-like Rad51 N-terminal domain-like 11
dsRNA-binding domain-like Ribosomal protein S5 domain 2-like 11
N-terminal domain of MutM-like DNA repair proteins Glucocorticoid receptor-like (DNA-binding domain) 11
Class I glutamine amidotransferase-like Adenine nucleotide alpha hydrolases-like 11
Dihydropteroate synthetase-like Methionine synthase domain 11
Methylesterase CheB, C-terminal domain S-adenosyl-L-methionine-dependent methyltransferases 11
Hsp33 domain HSP33 redox switch-like 11
Toll/Interleukin receptor TIR domain EF-hand 11
FAD/NAD(P)-binding domain Folate-binding domain 11
Thioredoxin-like Nqo1 FMN-binding domain-like 11
DNA repair protein MutS, domain III P-loop containing nucleoside triphosphate hydrolases 11
P-loop containing nucleoside triphosphate hydrolases Initiation factor IF2/eIF5b, domain 3 11
MurCD N-terminal domain MurD-like peptide ligases, catalytic domain 11
DNA-glycosylase Nudix 11
Nucleotidyltransferase substrate binding subunit/domain ACT-like 11
Cytidine deaminase-like Dihydrofolate reductase-like 11
Sensory domain-like PilZ domain-like 11
L domain-like P-loop containing nucleoside triphosphate hydrolases 11
ThrRS/AlaRS common domain Class II aaRS ABD-related 11
PurM N-terminal domain-like PurM N-terminal domain-like 11
(Trans)glycosidases Beta-D-glucan exohydrolase, C-terminal domain 11
Eukaryotic type KH-domain (KH-domain type I) P-loop containing nucleoside triphosphate hydrolases 11
Nucleotide-diphospho-sugar transferases IpsF-like 11
Cytochrome c Cytochrome c 11
4Fe-4S ferredoxins Fe-only hydrogenase 11
lambda repressor-like DNA-binding domains Periplasmic binding protein-like I 11
Toll/Interleukin receptor TIR domain Pectin lyase-like 11
NAD(P)-binding Rossmann-fold domains Acyl-CoA N-acyltransferases (Nat) 11
Glutathione synthetase ATP-binding domain-like Phosphoenolpyruvate/pyruvate domain 11
DNA repair protein MutS, domain I P-loop containing nucleoside triphosphate hydrolases 11
MurE/MurF N-terminal domain MurD-like peptide ligases, peptide-binding domain 11
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase C-terminal effector domain of the bipartite response regulators 11
Rudiment single hybrid motif Aldolase 11
Thioredoxin-like Nqo1C-terminal domain-like 11
Transcription factor NusA, N-terminal domain Rad51 N-terminal domain-like 11
Tex N-terminal region-like Ribonuclease H-like 11
Carbamate kinase-like ACT-like 11
Ribosomal protein S5 domain 2-like GHMP Kinase, C-terminal domain 11
HD-domain/PDEase-like TGS-like 11
P-loop containing nucleoside triphosphate hydrolases Restriction endonuclease-like 11
Translation proteins Initiation factor IF2/eIF5b, domain 3 11
Translation proteins PRC-barrel domain 11
S-adenosyl-L-methionine-dependent methyltransferases TPR-like 11
Nucleotidylyl transferase Riboflavin kinase-like 11
FabD/lysophospholipase-like NAD(P)-binding Rossmann-fold domains 11
GroEL equatorial domain-like GroEL-intermediate domain like 11
Ribonuclease H-like RuvA domain 2-like 11
Periplasmic binding protein-like II ACT-like 11
PYP-like sensor domain (PAS domain) C-terminal effector domain of the bipartite response regulators 11
NAD(P)-binding Rossmann-fold domains PLP-dependent transferases 11
P-loop containing nucleoside triphosphate hydrolases CarD-like 11
HAMP domain-like PP2C-like 11
Prokaryotic type KH domain (KH-domain type II) Rad51 N-terminal domain-like 11
PUA domain-like alpha/beta knot 11
FAD-binding/transporter-associated domain-like Uridine diphospho-N-Acetylenolpyruvylglucosamine reductase, MurB, C-terminal domain 11
Prokaryotic type KH domain (KH-domain type II) Prokaryotic type KH domain (KH-domain type II) 11
Alpha-L RNA-binding motif S-adenosyl-L-methionine-dependent methyltransferases 11
Carbamoyl phosphate synthetase, small subunit N-terminal domain Class I glutamine amidotransferase-like 11
MOP-like MOP-like 11
P-loop containing nucleoside triphosphate hydrolases TrpR-like 11
Ribosomal L11/L12e N-terminal domain Ribosomal protein L11, C-terminal domain 11
FAD/NAD(P)-binding domain 4Fe-4S ferredoxins 11
PurM C-terminal domain-like PurM C-terminal domain-like 11
Cryptochrome/photolyase, N-terminal domain Cryptochrome/photolyase FAD-binding domain 11
HPr-like Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain 11
CheC-like Surface presentation of antigens (SPOA) 11
CBS-domain pair Nucleotide cyclase 11
PYP-like sensor domain (PAS domain) Methyl-accepting chemotaxis protein (MCP) signaling domain 11
(Trans)glycosidases Nucleotide-diphospho-sugar transferases 11
Formyltransferase FMT C-terminal domain-like 11
Glutathione synthetase ATP-binding domain-like Carbamoyl phosphate synthetase, large subunit connection domain 11
Ribosomal protein S5 domain 2-like DNA mismatch repair protein MutL 11
PK beta-barrel domain-like PK C-terminal domain-like 11
Adenine nucleotide alpha hydrolases-like ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 11
Ribosomal protein S5 domain 2-like Eukaryotic type KH-domain (KH-domain type I) 11
FliG FliG 11
TPR-like Radical SAM enzymes 11
PIN domain-like Ribonuclease H-like 11
Actin-like ATPase domain Heat shock protein 70kD (HSP70), peptide-binding domain 11
Translation initiation factor IF3, N-terminal domain Translation initiation factor IF3, C-terminal domain 11
6-phosphogluconate dehydrogenase C-terminal domain-like ClpP/crotonase 11
HPr-like Phosphoenolpyruvate/pyruvate domain 11
YrdC/RibB RibA-like 11
Pyruvate-ferredoxin oxidoreductase, PFOR, domain III 4Fe-4S ferredoxins 11
Periplasmic binding protein-like II Homodimeric domain of signal transducing histidine kinase 11
Homocysteine S-methyltransferase Methionine synthase domain 11
P-loop containing nucleoside triphosphate hydrolases HRDC-like 11
Carbamate kinase-like PUA domain-like 11
Nucleotidyltransferase substrate binding subunit/domain Nucleotidyltransferase substrate binding subunit/domain 11
MoaD/ThiS ThiG-like 11
Methylated DNA-protein cysteine methyltransferase domain Methylated DNA-protein cysteine methyltransferase, C-terminal domain 11
Nitrite/Sulfite reductase N-terminal domain-like Nitrite/Sulfite reductase N-terminal domain-like 11
Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) Translation proteins 11
Phospholipase D/nuclease Phospholipase D/nuclease 11
Nucleotidyltransferase substrate binding subunit/domain Poly A polymerase C-terminal region-like 11
Glutathione synthetase ATP-binding domain-like Methylglyoxal synthase-like 11
Nucleotide-diphospho-sugar transferases UDP-Glycosyltransferase/glycogen phosphorylase 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) Alpha subunit of glutamate synthase, C-terminal domain 11
Class II aaRS and biotin synthetases Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) 11
Glucocorticoid receptor-like (DNA-binding domain) P-loop containing nucleoside triphosphate hydrolases 11
Chemotaxis receptor methyltransferase CheR, N-terminal domain TPR-like 11
Methionine synthase domain Cobalamin (vitamin B12)-binding domain 11
OMPA-like OmpA-like 11
Galactose mutarotase-like Six-hairpin glycosidases 11
Thioredoxin-like Six-hairpin glycosidases 11
RuvA domain 2-like JAB1/MPN domain 11
EspE N-terminal domain-like CheW-like 11
"Winged helix" DNA-binding domain LexA/Signal peptidase 11
Putative DNA-binding domain Ribonuclease H-like 11
Nucleotide-binding domain Inosine monophosphate dehydrogenase (IMPDH) 11
P-loop containing nucleoside triphosphate hydrolases ACT-like 11
4Fe-4S ferredoxins ARM repeat 11
CarD-like TRCF domain-like 11
Dihydropteroate synthetase-like Cobalamin (vitamin B12)-binding domain 11
Phosphoenolpyruvate/pyruvate domain PK C-terminal domain-like 11
TGS-like ThrRS/AlaRS common domain 11
Nucleic acid-binding proteins ArfGap/RecO-like zinc finger 11
Methylesterase CheB, C-terminal domain PYP-like sensor domain (PAS domain) 11
Transmembrane di-heme cytochromes a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) 11
P-loop containing nucleoside triphosphate hydrolases RecA protein, C-terminal domain 11
Aldolase Single hybrid motif 11
DNA ligase/mRNA capping enzyme, catalytic domain RuvA domain 2-like 11
Prokaryotic type I DNA topoisomerase Zinc beta-ribbon 11
6-phosphogluconate dehydrogenase C-terminal domain-like UDP-glucose/GDP-mannose dehydrogenase C-terminal domain 11
Nucleic acid-binding proteins DNA helicase RuvA subunit, C-terminal domain 11
Transcription factor NusA, N-terminal domain Prokaryotic type KH domain (KH-domain type II) 11
Nucleotidylyl transferase Alpha-L RNA-binding motif 11
L30e-like alpha/beta knot 11
Cadherin-like Cadherin-like 11
TerB-like Chaperone J-domain 11
Ribulose-phoshate binding barrel Nitrite and sulphite reductase 4Fe-4S domain-like 11
YhbC-like, N-terminal domain YhbC-like, C-terminal domain 11
DNA repair protein MutS, domain II P-loop containing nucleoside triphosphate hydrolases 11
DnaJ/Hsp40 cysteine-rich domain HSP40/DnaJ peptide-binding domain 11
Homocysteine S-methyltransferase Dihydropteroate synthetase-like 11
Cobalamin (vitamin B12)-binding domain Methionine synthase activation domain-like 11
TGS-like Class II aaRS and biotin synthetases 11
Ribonuclease PH domain 2-like Nucleic acid-binding proteins 11
C-terminal UvrC-binding domain of UvrB RuvA domain 2-like 11
Urease metallochaperone UreE, N-terminal domain Urease metallochaperone UreE, C-terminal domain 11
5' to 3' exonuclease, C-terminal subdomain DNA/RNA polymerases 11
Class I glutamine amidotransferase-like GMP synthetase C-terminal dimerisation domain 11
Globin-like PilZ domain-like 11
FAD-linked reductases, C-terminal domain 4Fe-4S ferredoxins 11
NAD(P)-binding Rossmann-fold domains Serine metabolism enzymes domain 11
Methylesterase CheB, C-terminal domain Chemotaxis receptor methyltransferase CheR, N-terminal domain 11
HCP-like HCP-like 11
P-loop containing nucleoside triphosphate hydrolases Helical scaffold and wing domains of SecA 11
EspE N-terminal domain-like Homodimeric domain of signal transducing histidine kinase 11
PUA domain-like S-adenosyl-L-methionine-dependent methyltransferases 11
FAD/NAD(P)-binding domain FAD/NAD(P)-binding domain 11
S13-like H2TH domain Glucocorticoid receptor-like (DNA-binding domain) 11
Cadherin-like Sialidases 11
alpha-helical ferredoxin Inosine monophosphate dehydrogenase (IMPDH) 11
UBA-like Elongation factor Ts (EF-Ts), dimerisation domain 11
Sensory domain-like PYP-like sensor domain (PAS domain) 11
EAL domain-like CBS-domain pair 11
Dihydropteroate synthetase-like Methionine synthase activation domain-like 11
Glutathione synthetase ATP-binding domain-like Phosphohistidine domain 11
HAMP domain-like Hemerythrin-like 11
Nucleotide-binding domain Ferredoxin reductase-like, C-terminal NADP-linked domain 11
PKD domain Cadherin-like 11
TK C-terminal domain-like 4Fe-4S ferredoxins 11
Periplasmic binding protein-like II ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 11
PreATP-grasp domain post-HMGL domain-like 11
Trigger factor ribosome-binding domain Triger factor/SurA peptide-binding domain-like 11
Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 1-deoxy-D-xylulose-5-phosphate reductoisomerase, C-terminal domain 11
Thioredoxin-like TPR-like 11
Phoshotransferase/anion transport protein Phosphoenolpyruvate/pyruvate domain 11
Ribonuclease PH domain 2-like Ribonuclease PH domain 2-like 11
Histidine-containing phosphotransfer domain, HPT domain EspE N-terminal domain-like 11
Homeodomain-like TPR-like 11
Riboflavin synthase domain-like Riboflavin synthase domain-like 11
Ribonuclease PH domain 2-like Eukaryotic type KH-domain (KH-domain type I) 11
Nucleotidyltransferase TGS-like 11
Ribonuclease H-like HRDC-like 11
2Fe-2S ferredoxin-like Formate dehydrogenase/DMSO reductase, domains 1-3 11
NAD(P)-binding Rossmann-fold domains 1-deoxy-D-xylulose-5-phosphate reductoisomerase, C-terminal domain 11
Obg GTP-binding protein N-terminal domain P-loop containing nucleoside triphosphate hydrolases 11
PGBD-like L,D-transpeptidase catalytic domain-like 11
S-adenosyl-L-methionine-dependent methyltransferases Putative methyltransferase TM0872, insert domain 11
PUA domain-like Ribosomal protein S5 domain 2-like 11
Nucleic acid-binding proteins BRCT domain 11
P-loop containing nucleoside triphosphate hydrolases C-terminal domain of B transposition protein 11
Nucleotide-binding domain Folate-binding domain 11
RuvA domain 2-like BRCT domain 11
Lysozyme-like PGBD-like 11
MgtE N-terminal domain-like CorA soluble domain-like 11
P-loop containing nucleoside triphosphate hydrolases FtsH protease domain-like 11
Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain 11
DnaK suppressor protein DksA, alpha-hairpin domain Glucocorticoid receptor-like (DNA-binding domain) 11
GAF domain-like GAF domain-like 11
Periplasmic binding protein-like II Nucleotide cyclase 11
PTS system IIB component-like PTS system IIB component-like 11
lambda repressor-like DNA-binding domains CheY-like 11
Pre-protein crosslinking domain of SecA Helical scaffold and wing domains of SecA 11
Adenine nucleotide alpha hydrolases-like Homodimeric domain of signal transducing histidine kinase 11
S-adenosylmethionine synthetase S-adenosylmethionine synthetase 11
Zinc beta-ribbon DNA primase core 11
Ribosomal protein S5 domain 2-like HSP90 C-terminal domain 11
RBP11-like subunits of RNA polymerase C-terminal domain of RNA polymerase alpha subunit 11
6-phosphogluconate dehydrogenase C-terminal domain-like 6-phosphogluconate dehydrogenase C-terminal domain-like 11
PreATP-grasp domain Carbamoyl phosphate synthetase, large subunit connection domain 11
Bacterial fluorinating enzyme, N-terminal domain Bacterial fluorinating enzyme, C-terminal domain 11
NAD(P)-binding Rossmann-fold domains Isocitrate/Isopropylmalate dehydrogenase-like 11
NusB-like S-adenosyl-L-methionine-dependent methyltransferases 11
NAD(P)-binding Rossmann-fold domains TrkA C-terminal domain-like 11
Tryptophan synthase beta subunit-like PLP-dependent enzymes CBS-domain pair 11
Carbon-nitrogen hydrolase Adenine nucleotide alpha hydrolases-like 11
Methylglyoxal synthase-like Cytidine deaminase-like 11
Fe,Mn superoxide dismutase (SOD), N-terminal domain Fe,Mn superoxide dismutase (SOD), C-terminal domain 11
4Fe-4S ferredoxins Formate dehydrogenase/DMSO reductase, domains 1-3 11
Nucleic acid-binding proteins Class II aaRS and biotin synthetases 11
Cation efflux protein transmembrane domain-like Cation efflux protein cytoplasmic domain-like 11
Pectin lyase-like Cadherin-like 11
E set domains E set domains 11
Nitrite/Sulfite reductase N-terminal domain-like Nitrite and sulphite reductase 4Fe-4S domain-like 11
YebC-like PFL-like glycyl radical enzymes 11
S-adenosyl-L-methionine-dependent methyltransferases S-adenosyl-L-methionine-dependent methyltransferases 11
GroEL equatorial domain-like GroEL apical domain-like 11
"Winged helix" DNA-binding domain S-adenosyl-L-methionine-dependent methyltransferases 11
Tubulin nucleotide-binding domain-like Tubulin C-terminal domain-like 11
NAD(P)-binding Rossmann-fold domains UDP-glucose/GDP-mannose dehydrogenase C-terminal domain 11
Nucleic acid-binding proteins Rad51 N-terminal domain-like 11
Ribonuclease H-like mu transposase, C-terminal domain 11
GIY-YIG endonuclease RuvA domain 2-like 11
NAD(P)-binding Rossmann-fold domains Glutathione synthetase ATP-binding domain-like 11
Eukaryotic type KH-domain (KH-domain type I) Nucleic acid-binding proteins 11
Ribonuclease H-like Nucleic acid-binding proteins 11
NAD(P)-binding Rossmann-fold domains MurD-like peptide ligases, catalytic domain 11
FMN-binding split barrel UbiD C-terminal domain-like 11
Glutathione synthetase ATP-binding domain-like Acyl-CoA N-acyltransferases (Nat) 11
Ribosomal protein S5 domain 2-like Nucleic acid-binding proteins 11
2,3-Bisphosphoglycerate-independent phosphoglycerate mutase, substrate-binding domain Alkaline phosphatase-like 11
Tex N-terminal region-like RuvA domain 2-like 11
Galactose mutarotase-like Galactose mutarotase-like 11
Homocysteine S-methyltransferase Methionine synthase activation domain-like 11
Toll/Interleukin receptor TIR domain TPR-like 11
Heat shock protein 70kD (HSP70), peptide-binding domain Heat shock protein 70kD (HSP70), C-terminal subdomain 11
P-loop containing nucleoside triphosphate hydrolases C-terminal UvrC-binding domain of UvrB 11
TrmE connector domain P-loop containing nucleoside triphosphate hydrolases 11
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase DNA mismatch repair protein MutL 11
PKD domain Sialidases 11
DNA methylase specificity domain DNA methylase specificity domain 11
PK beta-barrel domain-like Phosphoenolpyruvate/pyruvate domain 11
Nucleic acid-binding proteins GAD domain-like 11
Rho N-terminal domain-like Nucleic acid-binding proteins 11
PDZ domain-like PDZ domain-like 11
Aconitase iron-sulfur domain LeuD/IlvD-like 11
FKBP-like FKBP-like 11
HAMP domain-like Histidine-containing phosphotransfer domain, HPT domain 11
HD-domain/PDEase-like Nucleotidyltransferase 11
P-loop containing nucleoside triphosphate hydrolases Prokaryotic type KH domain (KH-domain type II) 11
Homo-oligomeric flavin-containing Cys decarboxylases, HFCD CoaB-like 11
Adenine nucleotide alpha hydrolases-like GAF domain-like 11
PPK N-terminal domain-like Phospholipase D/nuclease 11
Chemotaxis receptor methyltransferase CheR, N-terminal domain PYP-like sensor domain (PAS domain) 11
P-loop containing nucleoside triphosphate hydrolases Signal peptide-binding domain 11
Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain ACT-like 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) PRTase-like 11
Nucleotide-diphospho-sugar transferases Terpenoid synthases 11
MetI-like MetI-like 11
Zinc beta-ribbon Prokaryotic SH3-related domain 11
Glutathione synthetase ATP-binding domain-like Aldolase 11
Siroheme synthase middle domains-like Tetrapyrrole methylase 11
2Fe-2S ferredoxin-like Fe-only hydrogenase 11
ValRS/IleRS/LeuRS editing domain tRNA-binding arm 11
L9 N-domain-like Ribosomal protein L9 C-domain 11
Phoshotransferase/anion transport protein Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain 11
NagB/RpiA/CoA transferase-like alpha-helical ferredoxin 11
Carbamoyl phosphate synthetase, large subunit connection domain Methylglyoxal synthase-like 11
Homocysteine S-methyltransferase Cobalamin (vitamin B12)-binding domain 11
N-utilization substance G protein NusG, N-terminal domain Translation proteins SH3-like domain 11
Sensory domain-like Histidine-containing phosphotransfer domain, HPT domain 11
Sigma3 and sigma4 domains of RNA polymerase sigma factors Sigma3 and sigma4 domains of RNA polymerase sigma factors 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) FMN-linked oxidoreductases 11
5' to 3' exonuclease, C-terminal subdomain Ribonuclease H-like 11
lambda repressor-like DNA-binding domains LexA/Signal peptidase 11
PHP14-like Phospholipase D/nuclease 11
PreATP-grasp domain Aldolase 11
EspE N-terminal domain-like ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 11
lambda repressor-like DNA-binding domains RmlC-like cupins 11
TolB, N-terminal domain Tricorn protease N-terminal domain 11
Domain of the SRP/SRP receptor G-proteins P-loop containing nucleoside triphosphate hydrolases 11
GAF domain-like Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain 11
Succinyl-CoA synthetase domains Acyl-CoA N-acyltransferases (Nat) 11

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