SUPERFAMILY 1.75 HMM library and genome assignments server

Domain combination pairs in Hahella chejuensis KCTC 2396

All pairs of domain combinations at the superfamily level are listed here.
The identification of domain pairs does not account for the possibility of non-contiguous domains. Inserted, or interlaced, domains are seen as having a simple pair ordering.

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Adjacent domain pairs graph

Graph of adjacent domain pairs.


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Domain combination pairs

915 domain combination pairs.
Click on a column heading to sort that column, or the 'View' button to see domain architetures for that domain pair combination.

Superfamily (N) Superfamily (C) Number of occurrances Number unique
Homodimeric domain of signal transducing histidine kinase ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 6828
"Winged helix" DNA-binding domain Periplasmic binding protein-like II 611
P-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases 3714
Nucleotide cyclase EAL domain-like 3315
CheY-like ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 2822
Homeodomain-like Homeodomain-like 255
CheY-like C-terminal effector domain of the bipartite response regulators 241
PYP-like sensor domain (PAS domain) Nucleotide cyclase 2312
Multidrug resistance efflux transporter EmrE Multidrug resistance efflux transporter EmrE 223
CheY-like Homodimeric domain of signal transducing histidine kinase 2216
Homeodomain-like Tetracyclin repressor-like, C-terminal domain 181
Acetyl-CoA synthetase-like ACP-like 1816
P-loop containing nucleoside triphosphate hydrolases Homeodomain-like 185
CoA-dependent acyltransferases ACP-like 1816
NAD(P)-binding Rossmann-fold domains 6-phosphogluconate dehydrogenase C-terminal domain-like 185
CoA-dependent acyltransferases CoA-dependent acyltransferases 1816
Actin-like ATPase domain Actin-like ATPase domain 176
PYP-like sensor domain (PAS domain) ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 1711
CoA-dependent acyltransferases Acetyl-CoA synthetase-like 1715
TPR-like TPR-like 1611
PYP-like sensor domain (PAS domain) Homodimeric domain of signal transducing histidine kinase 1610
CheY-like Nucleotide cyclase 1612
PYP-like sensor domain (PAS domain) EAL domain-like 158
CheY-like CheY-like 1514
NAD(P)-binding Rossmann-fold domains Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 155
Multidrug efflux transporter AcrB transmembrane domain Multidrug efflux transporter AcrB transmembrane domain 155
Thioredoxin-like GST C-terminal domain-like 151
Acyl-CoA dehydrogenase NM domain-like Acyl-CoA dehydrogenase C-terminal domain-like 142
P-loop containing nucleoside triphosphate hydrolases MOP-like 141
CheY-like P-loop containing nucleoside triphosphate hydrolases 133
Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) 134
Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains 124
PreATP-grasp domain Glutathione synthetase ATP-binding domain-like 125
CheY-like Histidine-containing phosphotransfer domain, HPT domain 1212
CheY-like EAL domain-like 129
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase Histidine-containing phosphotransfer domain, HPT domain 1211
PYP-like sensor domain (PAS domain) PYP-like sensor domain (PAS domain) 1210
Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains 124
Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains Multidrug efflux transporter AcrB transmembrane domain 124
Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains 124
Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains Multidrug efflux transporter AcrB transmembrane domain 124
ABC transporter transmembrane region P-loop containing nucleoside triphosphate hydrolases 123
PYP-like sensor domain (PAS domain) CheY-like 1111
CheY-like Homeodomain-like 111
Composite domain of metallo-dependent hydrolases Metallo-dependent hydrolases 116
GroES-like NAD(P)-binding Rossmann-fold domains 113
Sigma2 domain of RNA polymerase sigma factors Sigma3 and sigma4 domains of RNA polymerase sigma factors 114
P-loop containing nucleoside triphosphate hydrolases Translation proteins 106
HAMP domain-like ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 104
FAD/NAD(P)-binding domain FAD-linked reductases, C-terminal domain 105
NAD(P)-binding Rossmann-fold domains NAD(P)-binding Rossmann-fold domains 1010
Thiolase-like Thiolase-like 93
Thiolase-like ACP-like 99
HAMP domain-like Homodimeric domain of signal transducing histidine kinase 93
ACP-like ACP-like 99
Homodimeric domain of signal transducing histidine kinase Histidine-containing phosphotransfer domain, HPT domain 98
lambda repressor-like DNA-binding domains Periplasmic binding protein-like I 91
Thiamin diphosphate-binding fold (THDP-binding) DHS-like NAD/FAD-binding domain 81
P-loop containing nucleoside triphosphate hydrolases Ribosomal protein S5 domain 2-like 86
Formate/glycerate dehydrogenase catalytic domain-like NAD(P)-binding Rossmann-fold domains 83
Regulatory protein AraC Homeodomain-like 83
(Trans)glycosidases Glycosyl hydrolase domain 85
Class I glutamine amidotransferase-like Homeodomain-like 82
NAD(P)-binding Rossmann-fold domains ACP-like 88
Thiolase-like NAD(P)-binding Rossmann-fold domains 77
FAD/NAD(P)-binding domain FAD/NAD-linked reductases, dimerisation (C-terminal) domain 72
PreATP-grasp domain Rudiment single hybrid motif 72
RmlC-like cupins Homeodomain-like 72
P-loop containing nucleoside triphosphate hydrolases EF-G C-terminal domain-like 74
"Winged helix" DNA-binding domain Dimeric alpha+beta barrel 71
Glutathione synthetase ATP-binding domain-like Rudiment single hybrid motif 72
ACP-like alpha/beta-Hydrolases 66
Carbohydrate binding domain (Trans)glycosidases 66
Nucleotidylyl transferase Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 66
MurD-like peptide ligases, catalytic domain MurD-like peptide ligases, peptide-binding domain 63
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase Ribosomal protein S5 domain 2-like 66
Translation proteins EF-G C-terminal domain-like 63
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase CheW-like 65
Galactose-binding domain-like Galactose-binding domain-like 66
EspE N-terminal domain-like P-loop containing nucleoside triphosphate hydrolases 64
FabD/lysophospholipase-like Probable ACP-binding domain of malonyl-CoA ACP transacylase 64
"Winged helix" DNA-binding domain PLP-dependent transferases 61
Nucleic acid-binding proteins Nucleic acid-binding proteins 64
Histidine-containing phosphotransfer domain, HPT domain CheW-like 65
Metalloproteases ("zincins"), catalytic domain Galactose-binding domain-like 53
FAD-binding/transporter-associated domain-like FAD-linked oxidases, C-terminal domain 53
Calcium ATPase, transduction domain A HAD-like 54
HAD-like Calcium ATPase, transmembrane domain M 54
"Winged helix" DNA-binding domain GntR ligand-binding domain-like 51
N-terminal nucleophile aminohydrolases (Ntn hydrolases) Adenine nucleotide alpha hydrolases-like 51
C-terminal effector domain of the bipartite response regulators TPR-like 54
Formate dehydrogenase/DMSO reductase, domains 1-3 ADC-like 53
Thiamin diphosphate-binding fold (THDP-binding) TK C-terminal domain-like 53
CoA-dependent acyltransferases alpha/beta-Hydrolases 55
Aminoacid dehydrogenase-like, N-terminal domain NAD(P)-binding Rossmann-fold domains 52
Acetyl-CoA synthetase-like Acetyl-CoA synthetase-like 55
EF-G C-terminal domain-like EF-G C-terminal domain-like 52
Lysozyme-like beta-lactamase/transpeptidase-like 54
CheW-like CheY-like 54
beta-Roll beta-Roll 55
P-loop containing nucleoside triphosphate hydrolases C-terminal effector domain of the bipartite response regulators 53
Calcium ATPase, transduction domain A Calcium ATPase, transmembrane domain M 54
Acetyl-CoA synthetase-like alpha/beta-Hydrolases 55
PurM N-terminal domain-like PurM C-terminal domain-like 52
Riboflavin synthase domain-like Ferredoxin reductase-like, C-terminal NADP-linked domain 54
"Winged helix" DNA-binding domain Chorismate lyase-like 41
FabD/lysophospholipase-like NAD(P)-binding Rossmann-fold domains 44
Thiolase-like FabD/lysophospholipase-like 44
PYP-like sensor domain (PAS domain) Methyl-accepting chemotaxis protein (MCP) signaling domain 43
Sensory domain-like ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 44
Cytochrome c Cytochrome c 44
Six-hairpin glycosidases Carbohydrate-binding domain 44
Sensory domain-like Homodimeric domain of signal transducing histidine kinase 44
FKBP-like Triger factor/SurA peptide-binding domain-like 44
gp5 N-terminal domain-like Phage fibre proteins 43
N-terminal domain of alpha and beta subunits of F1 ATP synthase C-terminal domain of alpha and beta subunits of F1 ATP synthase 41
PLP-binding barrel Alanine racemase C-terminal domain-like 43
P-loop containing nucleoside triphosphate hydrolases C-terminal domain of alpha and beta subunits of F1 ATP synthase 41
ACT-like ACT-like 43
Nucleic acid-binding proteins Class II aaRS and biotin synthetases 43
GAF domain-like Nucleotide cyclase 44
FabD/lysophospholipase-like ACP-like 44
CheY-like Methylesterase CheB, C-terminal domain 41
cAMP-binding domain-like "Winged helix" DNA-binding domain 41
Ribosomal protein S5 domain 2-like EF-G C-terminal domain-like 42
N-terminal domain of alpha and beta subunits of F1 ATP synthase P-loop containing nucleoside triphosphate hydrolases 41
(Trans)glycosidases Galactose-binding domain-like 44
Class II aaRS and biotin synthetases Class II aaRS ABD-related 43
MetI-like MetI-like 42
Cadherin-like Cadherin-like 44
P-loop containing nucleoside triphosphate hydrolases TPR-like 43
Probable ACP-binding domain of malonyl-CoA ACP transacylase ACP-like 33
FAD/NAD(P)-binding domain Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain 33
PDZ domain-like PDZ domain-like 33
2Fe-2S ferredoxin-like Riboflavin synthase domain-like 32
ClpP/crotonase 6-phosphogluconate dehydrogenase C-terminal domain-like 31
2Fe-2S ferredoxin-like CO dehydrogenase ISP C-domain like 32
Phosphoglucomutase, first 3 domains Phosphoglucomutase, C-terminal domain 32
6-phosphogluconate dehydrogenase C-terminal domain-like 6-phosphogluconate dehydrogenase C-terminal domain-like 31
Carbohydrate-binding domain E set domains 33
Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain 32
Zn-dependent exopeptidases Bacterial exopeptidase dimerisation domain 31
Single hybrid motif Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex 32
Nucleic acid-binding proteins P-loop containing nucleoside triphosphate hydrolases 33
Translation proteins EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 32
Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like 32
TPR-like Porins 33
MurCD N-terminal domain MurD-like peptide ligases, catalytic domain 31
6-phosphogluconate dehydrogenase C-terminal domain-like UDP-glucose/GDP-mannose dehydrogenase C-terminal domain 31
HlyD-like secretion proteins HlyD-like secretion proteins 32
MgtE N-terminal domain-like CBS-domain pair 32
Adenine nucleotide alpha hydrolases-like Adenine nucleotide alpha hydrolases-like 31
Thioesterase/thiol ester dehydrase-isomerase Thioesterase/thiol ester dehydrase-isomerase 31
Protein kinase-like (PK-like) Protein kinase-like (PK-like) 33
Phase 1 flagellin Phase 1 flagellin 31
(Trans)glycosidases E set domains 33
P-loop containing nucleoside triphosphate hydrolases EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 32
Sm-like ribonucleoproteins Mechanosensitive channel protein MscS (YggB), C-terminal domain 32
Nucleotidyltransferase ACT-like 32
HD-domain/PDEase-like Nucleotidyltransferase 32
cAMP-binding domain-like cAMP-binding domain-like 32
Probable ACP-binding domain of malonyl-CoA ACP transacylase NAD(P)-binding Rossmann-fold domains 33
Composite domain of metallo-dependent hydrolases Composite domain of metallo-dependent hydrolases 33
Chemotaxis receptor methyltransferase CheR, N-terminal domain S-adenosyl-L-methionine-dependent methyltransferases 31
Glutathione synthetase ATP-binding domain-like Phosphohistidine domain 32
Thiolase-like Probable ACP-binding domain of malonyl-CoA ACP transacylase 33
Thioredoxin-like Thioredoxin-like 32
Phosphoglucomutase, first 3 domains Phosphoglucomutase, first 3 domains 32
PP2C-like Protein kinase-like (PK-like) 31
NAD(P)-binding Rossmann-fold domains CoA-dependent acyltransferases 33
Periplasmic binding protein-like II OmpA-like 32
Creatinase/prolidase N-terminal domain Creatinase/aminopeptidase 32
beta-Roll Cadherin-like 33
Lysozyme-like PGBD-like 33
Translation proteins ThrRS/AlaRS common domain 32
NAD(P)-binding Rossmann-fold domains UDP-glucose/GDP-mannose dehydrogenase C-terminal domain 31
ClpP/crotonase ClpP/crotonase 31
Thiolase-like CoA-dependent acyltransferases 33
HD-domain/PDEase-like ACT-like 32
Trypsin-like serine proteases PDZ domain-like 33
Rhodanese/Cell cycle control phosphatase Rhodanese/Cell cycle control phosphatase 31
Carbohydrate binding domain Carbohydrate binding domain 33
GAF domain-like HD-domain/PDEase-like 32
Translation proteins Ribosomal protein S5 domain 2-like 31
Mechanosensitive channel protein MscS (YggB), transmembrane region Mechanosensitive channel protein MscS (YggB), C-terminal domain 32
LuxS/MPP-like metallohydrolase LuxS/MPP-like metallohydrolase 31
P-loop containing nucleoside triphosphate hydrolases post-AAA+ oligomerization domain-like 32
GAF domain-like CheY-like 33
ValRS/IleRS/LeuRS editing domain Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 33
Aldolase post-HMGL domain-like 32
Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex CoA-dependent acyltransferases 32
Nucleic acid-binding proteins Translation proteins SH3-like domain 32
NAD(P)-binding Rossmann-fold domains S-adenosyl-L-methionine-dependent methyltransferases 33
DnaK suppressor protein DksA, alpha-hairpin domain Glucocorticoid receptor-like (DNA-binding domain) 31
Homodimeric domain of signal transducing histidine kinase CheW-like 32
ValRS/IleRS/LeuRS editing domain Nucleotidylyl transferase 33
Single hybrid motif CoA-dependent acyltransferases 32
P-loop containing nucleoside triphosphate hydrolases Class I glutamine amidotransferase-like 31
MurCD N-terminal domain MurD-like peptide ligases, peptide-binding domain 31
PYP-like sensor domain (PAS domain) GAF domain-like 33
2Fe-2S ferredoxin-like Ferredoxin reductase-like, C-terminal NADP-linked domain 32
RuvA domain 2-like Nucleic acid-binding proteins 33
Homeodomain-like SIS domain 31
Phosphohistidine domain Phosphoenolpyruvate/pyruvate domain 32
Mechanosensitive channel protein MscS (YggB), transmembrane region Sm-like ribonucleoproteins 32
Alpha-L RNA-binding motif Pseudouridine synthase 31
P-loop containing nucleoside triphosphate hydrolases Restriction endonuclease-like 33
Sigma3 and sigma4 domains of RNA polymerase sigma factors Sigma3 and sigma4 domains of RNA polymerase sigma factors 32
ClpP/crotonase NAD(P)-binding Rossmann-fold domains 31
Double Clp-N motif P-loop containing nucleoside triphosphate hydrolases 32
Immunoglobulin Fibronectin type III 32
GAF domain-like Homeodomain-like 21
YbaK/ProRS associated domain HD-domain/PDEase-like 21
TrkA C-terminal domain-like TrkA C-terminal domain-like 22
"Winged helix" DNA-binding domain "Winged helix" DNA-binding domain 21
FAD/NAD(P)-binding domain Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain 22
Nucleotidyltransferase Poly A polymerase C-terminal region-like 22
Rudiment single hybrid motif Single hybrid motif 21
HSP40/DnaJ peptide-binding domain HSP40/DnaJ peptide-binding domain 22
GAF domain-like ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 22
Cadherin-like Integrin alpha N-terminal domain 22
Cadherin-like Concanavalin A-like lectins/glucanases 22
Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain Phosphoenolpyruvate/pyruvate domain 21
(Trans)glycosidases (Trans)glycosidases 22
CheY-like TPR-like 21
Nucleotidyltransferase TGS-like 21
Periplasmic binding protein-like II Periplasmic binding protein-like II 21
Sensory domain-like Methyl-accepting chemotaxis protein (MCP) signaling domain 22
N-terminal domain of MutM-like DNA repair proteins S13-like H2TH domain 21
Ribosomal protein S5 domain 2-like Type II DNA topoisomerase 22
Fibronectin type III Fibronectin type III 22
Actin-like ATPase domain Heat shock protein 70kD (HSP70), peptide-binding domain 22
MOSC N-terminal domain-like PK beta-barrel domain-like 21
HMA, heavy metal-associated domain HAD-like 22
CBS-domain pair MgtE membrane domain-like 21
HD-domain/PDEase-like TGS-like 21
post-HMGL domain-like Single hybrid motif 21
Carbohydrate-binding domain PKD domain 22
IlvD/EDD N-terminal domain-like LeuD/IlvD-like 21
Invasin/intimin cell-adhesion fragments Invasin/intimin cell-adhesion fragments 22
MgtE N-terminal domain-like MgtE membrane domain-like 21
Methylated DNA-protein cysteine methyltransferase domain Methylated DNA-protein cysteine methyltransferase, C-terminal domain 22
MurE/MurF N-terminal domain MurD-like peptide ligases, peptide-binding domain 21
ThrRS/AlaRS common domain Class II aaRS and biotin synthetases 22
(Trans)glycosidases Chitinase insertion domain 22
GAF domain-like Phosphoenolpyruvate/pyruvate domain 21
Acetyl-CoA synthetase-like NAD(P)-binding Rossmann-fold domains 22
NAD(P)-binding Rossmann-fold domains Succinyl-CoA synthetase domains 22
E set domains Six-hairpin glycosidases 22
Calcium ATPase, transduction domain A Metal cation-transporting ATPase, ATP-binding domain N 21
Integrin alpha N-terminal domain Tricorn protease N-terminal domain 22
MurE/MurF N-terminal domain MurD-like peptide ligases, catalytic domain 21
Cryptochrome/photolyase, N-terminal domain Cryptochrome/photolyase FAD-binding domain 21
Protein kinase-like (PK-like) P-loop containing nucleoside triphosphate hydrolases 22
Starch-binding domain-like (Trans)glycosidases 22
Metallo-dependent phosphatases 5'-nucleotidase (syn. UDP-sugar hydrolase), C-terminal domain 22
Aldolase AFP III-like domain 21
Folate-binding domain Aminomethyltransferase beta-barrel domain 21
PDZ domain-like ClpP/crotonase 21
E set domains Glycosyl hydrolase domain 22
Sensory domain-like PYP-like sensor domain (PAS domain) 22
GreA transcript cleavage protein, N-terminal domain FKBP-like 21
4'-phosphopantetheinyl transferase 4'-phosphopantetheinyl transferase 21
Riboflavin synthase domain-like Riboflavin synthase domain-like 21
beta-Roll Concanavalin A-like lectins/glucanases 22
PreATP-grasp domain Single hybrid motif 21
Chaperone J-domain HSP40/DnaJ peptide-binding domain 22
tRNA-binding arm Class II aaRS and biotin synthetases 21
Phage tail proteins Phage fibre proteins 22
Succinyl-CoA synthetase domains Glutathione synthetase ATP-binding domain-like 22
Cation efflux protein transmembrane domain-like Cation efflux protein cytoplasmic domain-like 22
NAD(P)-binding Rossmann-fold domains TrkA C-terminal domain-like 22
EAL domain-like HD-domain/PDEase-like 21
Metalloproteases ("zincins"), catalytic domain Ricin B-like lectins 22
Ribonuclease H-like DNA/RNA polymerases 22
PRTase-like PRTase-like 21
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase Type II DNA topoisomerase 22
LeuD/IlvD-like Aconitase iron-sulfur domain 22
NAD(P)-binding Rossmann-fold domains ACT-like 22
Type III secretion system domain Type III secretion system domain 21
Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain 22
Metal cation-transporting ATPase, ATP-binding domain N Calcium ATPase, transmembrane domain M 21
Histidine-containing phosphotransfer domain, HPT domain Nucleotide cyclase 22
Pectin lyase-like Pectin lyase-like 22
TGS-like ACT-like 21
CorA soluble domain-like Magnesium transport protein CorA, transmembrane region 21
PUA domain-like Ribosomal protein S5 domain 2-like 22
Aldolase Single hybrid motif 21
Nucleotidyltransferase Nucleotidyltransferase substrate binding subunit/domain 22
HAMP domain-like CheY-like 22
Acetyl-CoA synthetase-like Thiolase-like 22
Metal cation-transporting ATPase, ATP-binding domain N HAD-like 21
Periplasmic binding protein-like II ACT-like 22
"Winged helix" DNA-binding domain S-adenosyl-L-methionine-dependent methyltransferases 21
HD-domain/PDEase-like P-loop containing nucleoside triphosphate hydrolases 22
HMA, heavy metal-associated domain Calcium ATPase, transduction domain A 22
Concanavalin A-like lectins/glucanases Concanavalin A-like lectins/glucanases 22
Molybdenum cofactor-binding domain Molybdenum cofactor-binding domain 21
GAF domain-like P-loop containing nucleoside triphosphate hydrolases 21
lambda integrase-like, N-terminal domain DNA breaking-rejoining enzymes 21
Acyl-CoA N-acyltransferases (Nat) Glutathione synthetase ATP-binding domain-like 22
PUA domain-like alpha/beta knot 21
Phospholipase D/nuclease Phospholipase D/nuclease 22
Aspartate/glutamate racemase Aspartate/glutamate racemase 21
HAMP domain-like Nucleotide cyclase 22
HAMP domain-like Methyl-accepting chemotaxis protein (MCP) signaling domain 22
Cytochrome c C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase 22
Glutathione synthetase ATP-binding domain-like Single hybrid motif 21
Galactose-binding domain-like Concanavalin A-like lectins/glucanases 22
Type II DNA topoisomerase GyrA/ParC C-terminal domain-like 21
Cadherin-like Tricorn protease N-terminal domain 22
P-loop containing nucleoside triphosphate hydrolases FtsH protease domain-like 22
GAF domain-like EAL domain-like 22
Phage tail proteins gp5 N-terminal domain-like 22
Aldolase 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain 22
PYP-like sensor domain (PAS domain) Histidine-containing phosphotransfer domain, HPT domain 22
Ada DNA repair protein, N-terminal domain (N-Ada 10) Homeodomain-like 22
Aminopeptidase/glucanase lid domain Zn-dependent exopeptidases 21
CBS-domain pair FAD-binding/transporter-associated domain-like 21
Single hybrid motif Single hybrid motif 21
Carbohydrate binding domain Chitinase insertion domain 22
Starch-binding domain-like Glycosyl hydrolase domain 22
Carbohydrate-binding domain (Trans)glycosidases 22
Nitrite/Sulfite reductase N-terminal domain-like Nitrite and sulphite reductase 4Fe-4S domain-like 22
S-adenosyl-L-methionine-dependent methyltransferases ACP-like 22
S13-like H2TH domain Glucocorticoid receptor-like (DNA-binding domain) 21
Purple acid phosphatase, N-terminal domain Metallo-dependent phosphatases 22
Nucleotide-diphospho-sugar transferases UDP-Glycosyltransferase/glycogen phosphorylase 22
Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain Phosphohistidine domain 21
HMA, heavy metal-associated domain Calcium ATPase, transmembrane domain M 22
GAF domain-like Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain 21
N-terminal domain of MutM-like DNA repair proteins Glucocorticoid receptor-like (DNA-binding domain) 21
Thiolase-like S-adenosyl-L-methionine-dependent methyltransferases 22
Penicillin binding protein dimerisation domain beta-lactamase/transpeptidase-like 21
GAF domain-like Phosphohistidine domain 21
P-loop containing nucleoside triphosphate hydrolases "Winged helix" DNA-binding domain 22
PLC-like phosphodiesterases Ricin B-like lectins 22
Ribosomal protein S5 domain 2-like GHMP Kinase, C-terminal domain 21
PUA domain-like P-loop containing nucleoside triphosphate hydrolases 22
Ribosomal protein S5 domain 2-like Ribonuclease PH domain 2-like 22
Phage tail proteins Phage tail proteins 22
Protein kinase-like (PK-like) Periplasmic binding protein-like I 21
RBP11-like subunits of RNA polymerase C-terminal domain of RNA polymerase alpha subunit 11
L9 N-domain-like Ribosomal protein L9 C-domain 11
Nucleic acid-binding proteins DNA helicase RuvA subunit, C-terminal domain 11
N-terminal domain of bifunctional PutA protein FAD-linked oxidoreductase 11
Periplasmic binding protein-like II Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain 11
CheY-like CheC-like 11
FMN-binding split barrel UbiD C-terminal domain-like 11
5' to 3' exonuclease, C-terminal subdomain DNA/RNA polymerases 11
NTF2-like Sec-C motif 11
Nudix "Winged helix" DNA-binding domain 11
Probable ACP-binding domain of malonyl-CoA ACP transacylase S-adenosyl-L-methionine-dependent methyltransferases 11
Nucleic acid-binding proteins S-adenosyl-L-methionine-dependent methyltransferases 11
Homeodomain-like Methylated DNA-protein cysteine methyltransferase, C-terminal domain 11
Translation proteins Initiation factor IF2/eIF5b, domain 3 11
CheY-like HD-domain/PDEase-like 11
Trigger factor ribosome-binding domain Triger factor/SurA peptide-binding domain-like 11
post-HMGL domain-like 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain 11
Putative DNA-binding domain Initiation factor IF2/eIF5b, domain 3 11
GroES-like GroES-like 11
PurS-like PurM N-terminal domain-like 11
P-loop containing nucleoside triphosphate hydrolases Isocitrate/Isopropylmalate dehydrogenase-like 11
Barwin-like endoglucanases PHL pollen allergen 11
DNA ligase/mRNA capping enzyme, catalytic domain BRCT domain 11
NAD(P)-binding Rossmann-fold domains Glutathione synthetase ATP-binding domain-like 11
Rho N-terminal domain-like Nucleic acid-binding proteins 11
Succinyl-CoA synthetase domains Succinyl-CoA synthetase domains 11
Metalloproteases ("zincins"), catalytic domain CalX-like 11
Acyl-CoA N-acyltransferases (Nat) Carbon-nitrogen hydrolase 11
MesJ substrate recognition domain-like PheT/TilS domain 11
CBS-domain pair Inosine monophosphate dehydrogenase (IMPDH) 11
Homocysteine S-methyltransferase Methionine synthase activation domain-like 11
Nqo1 FMN-binding domain-like Nqo1C-terminal domain-like 11
EAL domain-like Sensory domain-like 11
DinB/YfiT-like putative metalloenzymes C-type lectin-like 11
THUMP domain-like Adenine nucleotide alpha hydrolases-like 11
Cupredoxins Cupredoxins 11
MoeA N-terminal region -like Molybdenum cofactor biosynthesis proteins 11
Ricin B-like lectins Ricin B-like lectins 11
Tubulin nucleotide-binding domain-like Tubulin C-terminal domain-like 11
"Winged helix" DNA-binding domain Ribokinase-like 11
Nucleotidyltransferase substrate binding subunit/domain ACT-like 11
Prokaryotic type I DNA topoisomerase Zinc beta-ribbon 11
Tryptophan synthase beta subunit-like PLP-dependent enzymes ACT-like 11
NusB-like S-adenosyl-L-methionine-dependent methyltransferases 11
CalX-like Galactose oxidase, central domain 11
TGS-like Class II aaRS ABD-related 11
Cytidine deaminase-like Dihydrofolate reductase-like 11
Carbamate kinase-like ACT-like 11
Zinc beta-ribbon DNA primase core 11
TGS-like Class II aaRS and biotin synthetases 11
Tetrahydrobiopterin biosynthesis enzymes-like Tetrahydrobiopterin biosynthesis enzymes-like 11
Ricin B-like lectins E set domains 11
Putative DNA-binding domain Probable bacterial effector-binding domain 11
L domain-like L domain-like 11
PheT/TilS domain Class II aaRS and biotin synthetases 11
Methionine synthase domain Cobalamin (vitamin B12)-binding domain 11
Cadherin-like Calcium-dependent phosphotriesterase 11
TSP type-3 repeat TSP type-3 repeat 11
Dihydropteroate synthetase-like Methionine synthase domain 11
Kelch motif E set domains 11
Homeodomain-like Methylated DNA-protein cysteine methyltransferase domain 11
DPP6 N-terminal domain-like Tricorn protease N-terminal domain 11
cAMP-binding domain-like Rhodanese/Cell cycle control phosphatase 11
DNA clamp DNA clamp 11
PIN domain-like 5' to 3' exonuclease, C-terminal subdomain 11
Aconitase B, N-terminal domain Aconitase iron-sulfur domain 11
Glutathione synthetase ATP-binding domain-like Glutathione synthetase ATP-binding domain-like 11
Nudix Nudix 11
Pre-protein crosslinking domain of SecA Helical scaffold and wing domains of SecA 11
Cadherin-like Pectin lyase-like 11
Carbohydrate binding domain Lysozyme-like 11
PKD domain PKD domain 11
FGAM synthase PurL, linker domain PurM C-terminal domain-like 11
alpha/beta-Hydrolases Metallo-dependent phosphatases 11
6-phosphogluconate dehydrogenase C-terminal domain-like EPT/RTPC-like 11
alpha-helical ferredoxin Nucleotide-binding domain 11
"Winged helix" DNA-binding domain LexA/Signal peptidase 11
Elongation factor Ts (EF-Ts), dimerisation domain Elongation factor Ts (EF-Ts), dimerisation domain 11
Acyl-CoA N-acyltransferases (Nat) Phospholipase D/nuclease 11
FabD/lysophospholipase-like GroES-like 11
FMN-linked oxidoreductases FAD/NAD(P)-binding domain 11
Galactose-binding domain-like Cytochrome c 11
Thioredoxin-like Six-hairpin glycosidases 11
DNA repair protein MutS, domain I DNA repair protein MutS, domain III 11
Chorismate mutase II ACT-like 11
Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain Pyrimidine nucleoside phosphorylase C-terminal domain 11
OMPA-like TSP type-3 repeat 11
Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain 11
Histidine-containing phosphotransfer domain, HPT domain EAL domain-like 11
Periplasmic binding protein-like II EAL domain-like 11
DeoB insert domain-like Alkaline phosphatase-like 11
Metalloproteases ("zincins"), catalytic domain PKD domain 11
TSP type-3 repeat DNase I-like 11
PLC-like phosphodiesterases C-type lectin-like 11
Six-hairpin glycosidases PKD domain 11
NAD(P)-binding Rossmann-fold domains LDH C-terminal domain-like 11
PreATP-grasp domain Methylglyoxal synthase-like 11
HCP-like HCP-like 11
PilZ domain-like PilZ domain-like 11
EspE N-terminal domain-like Immunoglobulin 11
P-loop containing nucleoside triphosphate hydrolases Helical scaffold and wing domains of SecA 11
"Winged helix" DNA-binding domain Nucleotidyltransferase 11
Glutamyl tRNA-reductase catalytic, N-terminal domain NAD(P)-binding Rossmann-fold domains 11
Transcription factor NusA, N-terminal domain Prokaryotic type KH domain (KH-domain type II) 11
FAD/NAD(P)-binding domain Acetyl-CoA synthetase-like 11
P-loop containing nucleoside triphosphate hydrolases Hypothetical protein YjiA, C-terminal domain 11
Putative DNA-binding domain Class II aaRS and biotin synthetases 11
Methyl-accepting chemotaxis protein (MCP) signaling domain Methyl-accepting chemotaxis protein (MCP) signaling domain 11
HAMP domain-like EAL domain-like 11
FAD/NAD(P)-binding domain alpha/beta-Hydrolases 11
Ribosomal protein S5 domain 2-like Eukaryotic type KH-domain (KH-domain type I) 11
P-loop containing nucleoside triphosphate hydrolases HprK N-terminal domain-like 11
Nucleic acid-binding proteins GAD domain-like 11
FabD/lysophospholipase-like S-adenosyl-L-methionine-dependent methyltransferases 11
Ribonuclease H-like RuvA domain 2-like 11
FAD/NAD(P)-binding domain Metallo-dependent phosphatases 11
N-utilization substance G protein NusG, N-terminal domain Translation proteins SH3-like domain 11
Carbohydrate-binding domain beta-N-acetylhexosaminidase-like domain 11
S-adenosyl-L-methionine-dependent methyltransferases TPR-like 11
Homocysteine S-methyltransferase Dihydropteroate synthetase-like 11
E set domains E set domains 11
TATA-box binding protein-like DNA-glycosylase 11
FMN-dependent nitroreductase-like FMN-dependent nitroreductase-like 11
HRDC-like HRDC-like 11
PYP-like sensor domain (PAS domain) P-loop containing nucleoside triphosphate hydrolases 11
PGBD-like Hedgehog/DD-peptidase 11
GIY-YIG endonuclease C-terminal UvrC-binding domain of UvrB 11
Periplasmic binding protein-like II Homodimeric domain of signal transducing histidine kinase 11
FGAM synthase PurL, linker domain PurM N-terminal domain-like 11
ISP domain Bet v1-like 11
Nucleotide-diphospho-sugar transferases Trimeric LpxA-like enzymes 11
Ribonuclease PH domain 2-like Eukaryotic type KH-domain (KH-domain type I) 11
GspK insert domain-like RuvA domain 2-like 11
Coiled-coil domain of nucleotide exchange factor GrpE Head domain of nucleotide exchange factor GrpE 11
Probable ACP-binding domain of malonyl-CoA ACP transacylase CoA-dependent acyltransferases 11
PurS-like FGAM synthase PurL, linker domain 11
Protein kinase-like (PK-like) C-type lectin-like 11
PurS-like PurM C-terminal domain-like 11
Sensory domain-like Histidine-containing phosphotransfer domain, HPT domain 11
Nqo1 FMN-binding domain-like alpha-helical ferredoxin 11
lambda repressor-like DNA-binding domains RmlC-like cupins 11
Diaminopimelate epimerase-like Diaminopimelate epimerase-like 11
Starch-binding domain-like E set domains 11
Nucleic acid-binding proteins BRCT domain 11
NAD(P)-binding Rossmann-fold domains 1-deoxy-D-xylulose-5-phosphate reductoisomerase, C-terminal domain 11
lambda repressor-like DNA-binding domains TPR-like 11
PIN domain-like P-loop containing nucleoside triphosphate hydrolases 11
Nucleotide-diphospho-sugar transferases RmlC-like cupins 11
SMAD/FHA domain SMAD/FHA domain 11
NagB/RpiA/CoA transferase-like D-ribose-5-phosphate isomerase (RpiA), lid domain 11
Tricorn protease domain 2 N-(deoxy)ribosyltransferase-like 11
PHP domain-like Nucleic acid-binding proteins 11
Domain of the SRP/SRP receptor G-proteins P-loop containing nucleoside triphosphate hydrolases 11
NAD(P)-binding Rossmann-fold domains Acyl-CoA N-acyltransferases (Nat) 11
DnaJ/Hsp40 cysteine-rich domain HSP40/DnaJ peptide-binding domain 11
Lysozyme-like LysM domain 11
Adenine nucleotide alpha hydrolases-like PheT/TilS domain 11
Cobalamin (vitamin B12)-binding domain Methionine synthase activation domain-like 11
R1 subunit of ribonucleotide reductase, N-terminal domain PFL-like glycyl radical enzymes 11
Subtilisin-like Galactose-binding domain-like 11
Adenine nucleotide alpha hydrolases-like Argininosuccinate synthetase, C-terminal domain 11
HCP-like Caspase-like 11
Zn-dependent exopeptidases Class I glutamine amidotransferase-like 11
Homocysteine S-methyltransferase Cobalamin (vitamin B12)-binding domain 11
Zn-dependent exopeptidases Galactose-binding domain-like 11
Dimeric alpha+beta barrel Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 11
Thiol:disulfide interchange protein DsbD, N-terminal domain (DsbD-alpha) Thioredoxin-like 11
EspE N-terminal domain-like Fibronectin type III 11
"Winged helix" DNA-binding domain NagB/RpiA/CoA transferase-like 11
Ribosomal protein L7/12, oligomerisation (N-terminal) domain ClpS-like 11
WD40 repeat-like MetI-like 11
CalX-like OMPA-like 11
Nqo1 middle domain-like Nqo1C-terminal domain-like 11
C-terminal UvrC-binding domain of UvrB RuvA domain 2-like 11
Ribonuclease H-like Nucleic acid-binding proteins 11
Tex N-terminal region-like Nucleic acid-binding proteins 11
NagB/RpiA/CoA transferase-like 4Fe-4S ferredoxins 11
Sensory domain-like Sensory domain-like 11
EPT/RTPC-like RNA 3'-terminal phosphate cyclase, RPTC, insert domain 11
PurM C-terminal domain-like Class I glutamine amidotransferase-like 11
GroEL-intermediate domain like GroEL apical domain-like 11
NAD(P)-binding Rossmann-fold domains Glutamyl tRNA-reductase dimerization domain 11
Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 1-deoxy-D-xylulose-5-phosphate reductoisomerase, C-terminal domain 11
P-loop containing nucleoside triphosphate hydrolases Signal peptide-binding domain 11
Voltage-gated potassium channels NAD(P)-binding Rossmann-fold domains 11
GroEL equatorial domain-like GroEL-intermediate domain like 11
Formate/glycerate dehydrogenase catalytic domain-like ACT-like 11
Obg GTP-binding protein N-terminal domain P-loop containing nucleoside triphosphate hydrolases 11
RuvA domain 2-like DNA helicase RuvA subunit, C-terminal domain 11
Transcription factor NusA, N-terminal domain Rad51 N-terminal domain-like 11
Siroheme synthase middle domains-like Tetrapyrrole methylase 11
PreATP-grasp domain Carbamoyl phosphate synthetase, large subunit connection domain 11
Creatinase/prolidase N-terminal domain Creatinase/prolidase N-terminal domain 11
FMN-linked oxidoreductases Nucleotide-binding domain 11
CO dehydrogenase ISP C-domain like FAD-binding/transporter-associated domain-like 11
CBS-domain pair Nucleotide-diphospho-sugar transferases 11
PUA domain-like S-adenosyl-L-methionine-dependent methyltransferases 11
CNF1/YfiH-like putative cysteine hydrolases CNF1/YfiH-like putative cysteine hydrolases 11
Sensory domain-like CheY-like 11
THUMP domain-like Rhodanese/Cell cycle control phosphatase 11
Dihydropteroate synthetase-like Nitrite and sulphite reductase 4Fe-4S domain-like 11
DNA-glycosylase Nudix 11
RuvA domain 2-like JAB1/MPN domain 11
Galactose-binding domain-like DNase I-like 11
YgfB-like Sec-C motif 11
Concanavalin A-like lectins/glucanases Fibronectin type III 11
gamma-Crystallin-like Ricin B-like lectins 11
CalX-like Invasin/intimin cell-adhesion fragments 11
FAD/NAD(P)-binding domain 4Fe-4S ferredoxins 11
CheY-like EspE N-terminal domain-like 11
UROD/MetE-like UROD/MetE-like 11
Nucleic acid-binding proteins Prokaryotic type KH domain (KH-domain type II) 11
CoA-transferase family III (CaiB/BaiF) CoA-transferase family III (CaiB/BaiF) 11
Cadherin-like CalX-like 11
TolB, N-terminal domain Tricorn protease N-terminal domain 11
2Fe-2S ferredoxin-like 4Fe-4S ferredoxins 11
Carbohydrate binding domain PKD domain 11
Cytochrome c oxidase subunit II-like, transmembrane region Cytochrome c 11
L30e-like alpha/beta knot 11
GroEL equatorial domain-like GroEL apical domain-like 11
Acid proteases PDZ domain-like 11
Methyl-accepting chemotaxis protein (MCP) signaling domain PilZ domain-like 11
Phosphoenolpyruvate/pyruvate domain PK C-terminal domain-like 11
Ada DNA repair protein, N-terminal domain (N-Ada 10) TATA-box binding protein-like 11
EspE N-terminal domain-like ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 11
PLP-dependent transferases PLP-dependent transferases 11
Glucocorticoid receptor-like (DNA-binding domain) P-loop containing nucleoside triphosphate hydrolases 11
Periplasmic binding protein-like II ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 11
Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain ACT-like 11
S-adenosylmethionine synthetase S-adenosylmethionine synthetase 11
Epsilon subunit of F1F0-ATP synthase N-terminal domain Epsilon subunit of F1F0-ATP synthase C-terminal domain 11
Ribonuclease PH domain 2-like Ribonuclease PH domain 2-like 11
vWA-like TPR-like 11
Nitrite and sulphite reductase 4Fe-4S domain-like Nitrite and sulphite reductase 4Fe-4S domain-like 11
PurS-like Class I glutamine amidotransferase-like 11
DNase I-like Type I dockerin domain 11
Glutathione synthetase ATP-binding domain-like Carbamoyl phosphate synthetase, large subunit connection domain 11
Nucleotidyltransferase substrate binding subunit/domain Nucleotidyltransferase substrate binding subunit/domain 11
alpha/beta-Hydrolases Galactose-binding domain-like 11
Trigger factor ribosome-binding domain FKBP-like 11
YVTN repeat-like/Quinoprotein amine dehydrogenase WD40 repeat-like 11
Sigma3 and sigma4 domains of RNA polymerase sigma factors TPR-like 11
Carbamoyl phosphate synthetase, large subunit connection domain Methylglyoxal synthase-like 11
Triger factor/SurA peptide-binding domain-like Homeodomain-like 11
N-terminal domain of DnaB helicase P-loop containing nucleoside triphosphate hydrolases 11
Carbon-nitrogen hydrolase Adenine nucleotide alpha hydrolases-like 11
Eukaryotic type KH-domain (KH-domain type I) Nucleic acid-binding proteins 11
MalF N-terminal region-like MetI-like 11
Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain Pyrimidine nucleoside phosphorylase C-terminal domain 11
Purple acid phosphatase, N-terminal domain Type I dockerin domain 11
Clavaminate synthase-like WD40 repeat-like 11
Ada DNA repair protein, N-terminal domain (N-Ada 10) Methylated DNA-protein cysteine methyltransferase domain 11
P-loop containing nucleoside triphosphate hydrolases TrpR-like 11
YWTD domain Calcium-dependent phosphotriesterase 11
CheC-like Surface presentation of antigens (SPOA) 11
P-loop containing nucleoside triphosphate hydrolases Acyl-CoA N-acyltransferases (Nat) 11
lambda repressor-like DNA-binding domains P-loop containing nucleoside triphosphate hydrolases 11
FAD-linked oxidases, C-terminal domain alpha-helical ferredoxin 11
Zn-dependent exopeptidases LysM domain 11
Lamin A/C globular tail domain His-Me finger endonucleases 11
Nucleotidylyl transferase Ribosomal protein L25-like 11
2Fe-2S ferredoxin-like CO dehydrogenase flavoprotein C-terminal domain-like 11
PurM N-terminal domain-like PurM N-terminal domain-like 11
CheY-like PP2C-like 11
PKD domain Glycosyl hydrolases family 6, cellulases 11
Histidine-containing phosphotransfer domain, HPT domain HD-domain/PDEase-like 11
ACP-like PLP-dependent transferases 11
CBD9-like ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 11
YjeF N-terminal domain-like Ribokinase-like 11
2Fe-2S ferredoxin-like alpha-helical ferredoxin 11
OMPA-like OmpA-like 11
ACT-like HAD-like 11
Ribokinase-like Thiamin phosphate synthase 11
cAMP-binding domain-like HD-domain/PDEase-like 11
Cupredoxins Cytochrome c 11
FAD/NAD(P)-binding domain Nitrite/Sulfite reductase N-terminal domain-like 11
ARM repeat ARM repeat 11
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase HSP90 C-terminal domain 11
MetI-like P-loop containing nucleoside triphosphate hydrolases 11
Pentapeptide repeat-like Voltage-gated potassium channels 11
P-loop containing nucleoside triphosphate hydrolases CarD-like 11
Ricin B-like lectins Kelch motif 11
Thioredoxin-like Nqo1 middle domain-like 11
Aconitase B, N-terminal domain LeuD/IlvD-like 11
RelE-like P-loop containing nucleoside triphosphate hydrolases 11
UBA-like Elongation factor Ts (EF-Ts), dimerisation domain 11
TROVE domain-like vWA-like 11
Ribosomal L11/L12e N-terminal domain Ribosomal protein L11, C-terminal domain 11
5' to 3' exonuclease, C-terminal subdomain Ribonuclease H-like 11
FAD/NAD(P)-binding domain HI0933 insert domain-like 11
MFS general substrate transporter Glycerol-3-phosphate (1)-acyltransferase 11
Formyltransferase FMT C-terminal domain-like 11
Rad51 N-terminal domain-like Rad51 N-terminal domain-like 11
Carbamate kinase-like PUA domain-like 11
Histidine-containing phosphotransfer domain, HPT domain Histidine-containing phosphotransfer domain, HPT domain 11
Insert subdomain of RNA polymerase alpha subunit RBP11-like subunits of RNA polymerase 11
CO dehydrogenase ISP C-domain like CO dehydrogenase flavoprotein C-terminal domain-like 11
Quinoprotein alcohol dehydrogenase-like Quinoprotein alcohol dehydrogenase-like 11
N-terminal domain of bifunctional PutA protein ALDH-like 11
Homeodomain-like DNA-glycosylase 11
FMN-linked oxidoreductases Alpha subunit of glutamate synthase, C-terminal domain 11
Methionine synthase domain Methionine synthase activation domain-like 11
Ribokinase-like Nucleotidylyl transferase 11
Pili subunits GspK insert domain-like 11
Nicotinate/Quinolinate PRTase N-terminal domain-like Nicotinate/Quinolinate PRTase C-terminal domain-like 11
Nucleotidylyl transferase Nucleic acid-binding proteins 11
Translation initiation factor IF3, N-terminal domain Translation initiation factor IF3, C-terminal domain 11
Trypsin-like serine proteases PKD domain 11
P-loop containing nucleoside triphosphate hydrolases CBS-domain pair 11
Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 11
Leukotriene A4 hydrolase N-terminal domain Metalloproteases ("zincins"), catalytic domain 11
PurM N-terminal domain-like Class I glutamine amidotransferase-like 11
CO dehydrogenase molybdoprotein N-domain-like Molybdenum cofactor-binding domain 11
LysM domain LysM domain 11
Adenine nucleotide alpha hydrolases-like DHS-like NAD/FAD-binding domain 11
P-loop containing nucleoside triphosphate hydrolases vWA-like 11
Zinc beta-ribbon Zinc beta-ribbon 11
YajQ-like YajQ-like 11
Tex N-terminal region-like Ribonuclease H-like 11
beta-lactamase/transpeptidase-like ABC transporter transmembrane region 11
P-loop containing nucleoside triphosphate hydrolases PGBD-like 11
P-loop containing nucleoside triphosphate hydrolases Prokaryotic type KH domain (KH-domain type II) 11
Class II aaRS and biotin synthetases C-terminal domain of transcriptional repressors 11
Flagellar hook protein flgE Flagellar hook protein flgE 11
cAMP-binding domain-like CBS-domain pair 11
Tricorn protease N-terminal domain Calcium-dependent phosphotriesterase 11
Prokaryotic type KH domain (KH-domain type II) Ribosomal protein S3 C-terminal domain 11
HCP-like TPR-like 11
Putative DNA-binding domain P-loop containing nucleoside triphosphate hydrolases 11
E set domains PKD domain 11
Metalloproteases ("zincins"), catalytic domain gamma-Crystallin-like 11
Multiheme cytochromes Multiheme cytochromes 11
Trypsin-like serine proteases HCP-like 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) Alpha subunit of glutamate synthase, C-terminal domain 11
Tricorn protease N-terminal domain Tricorn protease N-terminal domain 11
Fe,Mn superoxide dismutase (SOD), N-terminal domain Fe,Mn superoxide dismutase (SOD), C-terminal domain 11
Tricorn protease N-terminal domain Hedgehog/intein (Hint) domain 11
FAD-linked oxidoreductase ALDH-like 11
beta-N-acetylhexosaminidase-like domain E set domains 11
NagB/RpiA/CoA transferase-like NagB/RpiA/CoA transferase-like 11
Nucleotidylyl transferase tRNA-binding arm 11
dsRNA-binding domain-like Ribosomal protein S5 domain 2-like 11
Dihydropteroate synthetase-like Cobalamin (vitamin B12)-binding domain 11
TerB-like Chaperone J-domain 11
Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases Nucleic acid-binding proteins 11
Galactose-binding domain-like gamma-Crystallin-like 11
MOP-like MOP-like 11
TSP type-3 repeat OmpA-like 11
Cobalamin (vitamin B12)-binding domain Radical SAM enzymes 11
Class II aaRS and biotin synthetases Translation proteins 11
Adenine nucleotide alpha hydrolases-like MesJ substrate recognition domain-like 11
Homo-oligomeric flavin-containing Cys decarboxylases, HFCD CoaB-like 11
PA domain Zn-dependent exopeptidases 11
Ribonuclease PH domain 2-like Nucleic acid-binding proteins 11
Molybdenum cofactor biosynthesis proteins MoeA C-terminal domain-like 11
lambda repressor-like DNA-binding domains LexA/Signal peptidase 11
PheT/TilS domain Anticodon-binding domain of PheRS 11
FAD-binding/transporter-associated domain-like alpha-helical ferredoxin 11
beta-lactamase/transpeptidase-like beta-lactamase/transpeptidase-like 11
RuvA domain 2-like BRCT domain 11
ClpP/crotonase NfeD domain-like 11
C-type lectin-like Ricin B-like lectins 11
EspE N-terminal domain-like Homodimeric domain of signal transducing histidine kinase 11
PYP-like sensor domain (PAS domain) Homeodomain-like 11
RNase III domain-like dsRNA-binding domain-like 11
CbiG N-terminal domain-like CobE/GbiG C-terminal domain-like 11
Nucleic acid-binding proteins Anticodon-binding domain of PheRS 11
Class II aaRS and biotin synthetases Anticodon-binding domain of PheRS 11
Nucleic acid-binding proteins Rad51 N-terminal domain-like 11
Nucleotide-binding domain FAD/NAD(P)-binding domain 11
Glutathione synthetase ATP-binding domain-like Methylglyoxal synthase-like 11
Ricin B-like lectins Galactose oxidase, central domain 11
YhbC-like, N-terminal domain YhbC-like, C-terminal domain 11
Tetrapyrrole methylase S-adenosyl-L-methionine-dependent methyltransferases 11
Barwin-like endoglucanases Sporulation related repeat 11
PurM C-terminal domain-like PurM C-terminal domain-like 11
DNA ligase/mRNA capping enzyme, catalytic domain RuvA domain 2-like 11
Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases tRNA-binding arm 11
Ada DNA repair protein, N-terminal domain (N-Ada 10) Methylated DNA-protein cysteine methyltransferase, C-terminal domain 11
Kelch motif Galactose oxidase, central domain 11
NAD(P)-binding Rossmann-fold domains Siroheme synthase middle domains-like 11
Hsp33 domain HSP33 redox switch-like 11
Nucleic acid-binding proteins PheT/TilS domain 11
GIY-YIG endonuclease RuvA domain 2-like 11
Metallo-dependent phosphatases Type I dockerin domain 11
Pseudouridine synthase PUA domain-like 11
DNA repair protein MutS, domain I P-loop containing nucleoside triphosphate hydrolases 11
Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain Acetyl-CoA synthetase-like 11
Nitrite/Sulfite reductase N-terminal domain-like Nitrite/Sulfite reductase N-terminal domain-like 11
Ricin B-like lectins Concanavalin A-like lectins/glucanases 11
E set domains alpha/beta-Hydrolases 11
Concanavalin A-like lectins/glucanases TSP type-3 repeat 11
FAD-binding/transporter-associated domain-like CO dehydrogenase flavoprotein C-terminal domain-like 11
Trypsin-like serine proteases PR-1-like 11
Nitrous oxide reductase, N-terminal domain Cupredoxins 11
ABC transporter involved in vitamin B12 uptake, BtuC ABC transporter involved in vitamin B12 uptake, BtuC 11
Chorismate mutase II Periplasmic binding protein-like II 11
Nucleotidyltransferase Nucleotidyltransferase 11
Enolase N-terminal domain-like Enolase C-terminal domain-like 11
Carbohydrate-binding domain Carbohydrate-binding domain 11
Nqo1 FMN-binding domain-like Nqo1 middle domain-like 11
Nucleotidylyl transferase An anticodon-binding domain of class I aminoacyl-tRNA synthetases 11
YrdC/RibB RibA-like 11
Carbohydrate-binding domain Glycosyl hydrolases family 6, cellulases 11
NAD(P)-binding Rossmann-fold domains EPT/RTPC-like 11
PK beta-barrel domain-like PK C-terminal domain-like 11
Class I glutamine amidotransferase-like GMP synthetase C-terminal dimerisation domain 11
Glutathione synthetase ATP-binding domain-like Phosphoenolpyruvate/pyruvate domain 11
Insert subdomain of RNA polymerase alpha subunit C-terminal domain of RNA polymerase alpha subunit 11
2,3-Bisphosphoglycerate-independent phosphoglycerate mutase, substrate-binding domain Alkaline phosphatase-like 11
Thioredoxin-like TPR-like 11
Cytochrome c oxidase subunit II-like, transmembrane region Cupredoxins 11
Translation proteins PRC-barrel domain 11
P-loop containing nucleoside triphosphate hydrolases Pre-protein crosslinking domain of SecA 11
Acylphosphatase/BLUF domain-like YrdC/RibB 11
Carbohydrate binding domain Galactose-binding domain-like 11
Acetyl-CoA synthetase-like Probable ACP-binding domain of malonyl-CoA ACP transacylase 11
Ribosomal protein S5 domain 2-like HSP90 C-terminal domain 11
HMA, heavy metal-associated domain HMA, heavy metal-associated domain 11
Nucleotidylyl transferase Alpha-L RNA-binding motif 11
DNA methylase specificity domain DNA methylase specificity domain 11
Adenine nucleotide alpha hydrolases-like Rhodanese/Cell cycle control phosphatase 11
Thioredoxin-like Nqo1C-terminal domain-like 11
Nucleotidylyl transferase Riboflavin kinase-like 11
P-loop containing nucleoside triphosphate hydrolases RecA protein, C-terminal domain 11
Nucleotidyltransferase substrate binding subunit/domain HD-domain/PDEase-like 11
Homocysteine S-methyltransferase Methionine synthase domain 11
Protein kinase-like (PK-like) C-terminal domain of RNA polymerase alpha subunit 11
FKBP-like FKBP-like 11
Thiolase-like alpha/beta-Hydrolases 11
Histidine-containing phosphotransfer domain, HPT domain EspE N-terminal domain-like 11
Cadherin-like Hedgehog/intein (Hint) domain 11
YbaK/ProRS associated domain Class II aaRS ABD-related 11
Heat shock protein 70kD (HSP70), peptide-binding domain Heat shock protein 70kD (HSP70), C-terminal subdomain 11
P-loop containing nucleoside triphosphate hydrolases HRDC-like 11
Methylglyoxal synthase-like Cytidine deaminase-like 11
Periplasmic binding protein-like II Nucleotide cyclase 11
ParB/Sulfiredoxin S-adenosyl-L-methionine-dependent methyltransferases 11
Ribosomal protein S5 domain 2-like Nucleic acid-binding proteins 11
PPK N-terminal domain-like Phospholipase D/nuclease 11
Glutamine synthetase, N-terminal domain Glutamine synthetase/guanido kinase 11
FAD-binding/transporter-associated domain-like Uridine diphospho-N-Acetylenolpyruvylglucosamine reductase, MurB, C-terminal domain 11
ValRS/IleRS/LeuRS editing domain tRNA-binding arm 11
HAMP domain-like Histidine-containing phosphotransfer domain, HPT domain 11
FAD/NAD(P)-binding domain Nitrite and sulphite reductase 4Fe-4S domain-like 11
Chaperone J-domain DnaJ/Hsp40 cysteine-rich domain 11
Methionyl-tRNA synthetase (MetRS), Zn-domain Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 11
TSP type-3 repeat beta-Roll 11
Beta-D-glucan exohydrolase, C-terminal domain Galactose-binding domain-like 11
Translation proteins Translation proteins 11
Integrin alpha N-terminal domain Hedgehog/intein (Hint) domain 11
Homeodomain-like TATA-box binding protein-like 11
Carbamoyl phosphate synthetase, small subunit N-terminal domain Class I glutamine amidotransferase-like 11
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 11
Isochorismatase-like hydrolases ACP-like 11
CBD9-like Homodimeric domain of signal transducing histidine kinase 11
GAF domain-like Homodimeric domain of signal transducing histidine kinase 11
Ribosomal protein S5 domain 2-like DNA mismatch repair protein MutL 11
Nucleic acid-binding proteins Putative DNA-binding domain 11
Globin-like Riboflavin synthase domain-like 11
Alpha-L RNA-binding motif S-adenosyl-L-methionine-dependent methyltransferases 11
P-loop containing nucleoside triphosphate hydrolases TGS-like 11
PIN domain-like Ribonuclease H-like 11
EspE N-terminal domain-like CheW-like 11
Ada DNA repair protein, N-terminal domain (N-Ada 10) DNA-glycosylase 11
Alkaline phosphatase-like Hemopexin-like domain 11
P-loop containing nucleoside triphosphate hydrolases Initiation factor IF2/eIF5b, domain 3 11
Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) Translation proteins 11
Periplasmic binding protein-like I Periplasmic binding protein-like I 11
FGAM synthase PurL, linker domain Class I glutamine amidotransferase-like 11
S-adenosyl-L-methionine-dependent methyltransferases Putative methyltransferase TM0872, insert domain 11
Succinyl-CoA synthetase domains Acyl-CoA N-acyltransferases (Nat) 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) FMN-linked oxidoreductases 11
Thiolase-like GroES-like 11
PGBD-like L,D-transpeptidase catalytic domain-like 11
PheT/TilS domain Putative DNA-binding domain 11
PHP14-like Phospholipase D/nuclease 11
Acetyl-CoA synthetase-like FabD/lysophospholipase-like 11
HesB-like domain Fe-S cluster assembly (FSCA) domain-like 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) PRTase-like 11
Transmembrane di-heme cytochromes CBD9-like 11
Class II aaRS and biotin synthetases YbaK/ProRS associated domain 11
MoeA N-terminal region -like MoeA C-terminal domain-like 11
Glutamine synthetase/guanido kinase GatB/YqeY motif 11
Carbamate kinase-like Acyl-CoA N-acyltransferases (Nat) 11
Concanavalin A-like lectins/glucanases DNase I-like 11
P-loop containing nucleoside triphosphate hydrolases C-terminal UvrC-binding domain of UvrB 11
Putative DNA-binding domain Translation proteins 11
Cadherin-like OMPA-like 11
Methionyl-tRNA synthetase (MetRS), Zn-domain Nucleic acid-binding proteins 11
DNA repair protein MutS, domain II P-loop containing nucleoside triphosphate hydrolases 11
Galactose-binding domain-like TSP type-3 repeat 11
NAD(P)-binding Rossmann-fold domains PLP-dependent transferases 11
Macro domain-like Zn-dependent exopeptidases 11
beta-lactamase/transpeptidase-like P-loop containing nucleoside triphosphate hydrolases 11
DNA repair protein MutS, domain III P-loop containing nucleoside triphosphate hydrolases 11
Oxidoreductase molybdopterin-binding domain E set domains 11
S-adenosyl-L-methionine-dependent methyltransferases S-adenosyl-L-methionine-dependent methyltransferases 11
Ribonuclease H-like HRDC-like 11
Class I glutamine amidotransferase-like Adenine nucleotide alpha hydrolases-like 11
Heme-dependent peroxidases Heme-dependent peroxidases 11
Urease metallochaperone UreE, N-terminal domain Urease metallochaperone UreE, C-terminal domain 11
SMAD/FHA domain EAL domain-like 11
Ricin B-like lectins Galactose-binding domain-like 11
FliG FliG 11
Fe-S cluster assembly (FSCA) domain-like P-loop containing nucleoside triphosphate hydrolases 11
Glutamyl tRNA-reductase catalytic, N-terminal domain Glutamyl tRNA-reductase dimerization domain 11
PreATP-grasp domain PreATP-grasp domain 11
Dihydropteroate synthetase-like Methionine synthase activation domain-like 11
Periplasmic binding protein-like II CheY-like 11
Adenine nucleotide alpha hydrolases-like GMP synthetase C-terminal dimerisation domain 11
C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase Galactose-binding domain-like 11
Ricin B-like lectins Pectin lyase-like 11
PPK N-terminal domain-like PHP14-like 11
Transmembrane di-heme cytochromes a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) 11
beta-N-acetylhexosaminidase-like domain (Trans)glycosidases 11
Methionyl-tRNA synthetase (MetRS), Zn-domain Nucleotidylyl transferase 11
Class II aaRS and biotin synthetases Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) 11
Globin-like Ferredoxin reductase-like, C-terminal NADP-linked domain 11
Ribosomal protein L6 Ribosomal protein L6 11
FAD/NAD(P)-binding domain FAD/NAD(P)-binding domain 11
Class II aaRS and biotin synthetases GAD domain-like 11
Periplasmic binding protein-like II Lysozyme-like 11
PKD domain (Trans)glycosidases 11
P-loop containing nucleoside triphosphate hydrolases TRCF domain-like 11
GroES-like ACP-like 11
FAD-linked reductases, C-terminal domain 4Fe-4S ferredoxins 11
CarD-like TRCF domain-like 11
FabD/lysophospholipase-like CoA-dependent acyltransferases 11
MFS general substrate transporter MFS general substrate transporter 11
ACT-like Formyltransferase 11
2Fe-2S ferredoxin-like FAD-binding/transporter-associated domain-like 11
DNA repair protein MutS, domain II DNA repair protein MutS, domain III 11
DsbC/DsbG N-terminal domain-like Thioredoxin-like 11
Galactose oxidase, central domain E set domains 11
Transcription factor NusA, N-terminal domain Nucleic acid-binding proteins 11
Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain Nucleotidylyl transferase 11
all-alpha NTP pyrophosphatases all-alpha NTP pyrophosphatases 11
Nucleotidylyl transferase Nudix 11
NAD(P)-binding Rossmann-fold domains Tetrapyrrole methylase 11
Pectin lyase-like Integrin alpha N-terminal domain 11
ThrRS/AlaRS common domain Class II aaRS ABD-related 11
Actin-like ATPase domain HD-domain/PDEase-like 11
Pili subunits RuvA domain 2-like 11
TrmE connector domain P-loop containing nucleoside triphosphate hydrolases 11
Putative DNA-binding domain Anticodon-binding domain of PheRS 11
DNA repair protein MutS, domain I DNA repair protein MutS, domain II 11
beta-lactamase/transpeptidase-like Penicillin-binding protein associated domain 11
Thioredoxin-like Nqo1 FMN-binding domain-like 11
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase DNA mismatch repair protein MutL 11
Rho N-terminal domain-like P-loop containing nucleoside triphosphate hydrolases 11
TGS-like ThrRS/AlaRS common domain 11
Prokaryotic type KH domain (KH-domain type II) Rad51 N-terminal domain-like 11
Prokaryotic type KH domain (KH-domain type II) Prokaryotic type KH domain (KH-domain type II) 11
PK beta-barrel domain-like Phosphoenolpyruvate/pyruvate domain 11
Nucleotidylyl transferase P-loop containing nucleoside triphosphate hydrolases 11
DNA ligase/mRNA capping enzyme, catalytic domain Nucleic acid-binding proteins 11
Tex N-terminal region-like RuvA domain 2-like 11
Nucleotide cyclase SMAD/FHA domain 11
RuvA domain 2-like RuvA domain 2-like 11
HprK N-terminal domain-like Isocitrate/Isopropylmalate dehydrogenase-like 11
Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) ThrRS/AlaRS common domain 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) SIS domain 11
PEP carboxykinase N-terminal domain PEP carboxykinase-like 11
Integrin alpha N-terminal domain Calcium-dependent phosphotriesterase 11
(Trans)glycosidases Beta-D-glucan exohydrolase, C-terminal domain 11
Periplasmic binding protein-like II PYP-like sensor domain (PAS domain) 11
PIN domain-like DNA/RNA polymerases 11
Invasin/intimin cell-adhesion fragments Galactose oxidase, central domain 11
Sigma2 domain of RNA polymerase sigma factors TPR-like 11
DNA/RNA polymerases Lesion bypass DNA polymerase (Y-family), little finger domain 11
"Winged helix" DNA-binding domain MOP-like 11
Actin-like ATPase domain Heat shock protein 70kD (HSP70), C-terminal subdomain 11

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