SUPERFAMILY 1.75 HMM library and genome assignments server

Domain combination pairs in Pseudoalteromonas haloplanktis TAC125

All pairs of domain combinations at the superfamily level are listed here.
The identification of domain pairs does not account for the possibility of non-contiguous domains. Inserted, or interlaced, domains are seen as having a simple pair ordering.

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Adjacent domain pairs graph

Graph of adjacent domain pairs.


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Domain combination pairs

693 domain combination pairs.
Click on a column heading to sort that column, or the 'View' button to see domain architetures for that domain pair combination.

Superfamily (N) Superfamily (C) Number of occurrances Number unique
"Winged helix" DNA-binding domain Periplasmic binding protein-like II 351
Homodimeric domain of signal transducing histidine kinase ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 3321
P-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases 2314
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase CheY-like 1714
Nucleotide cyclase EAL domain-like 1711
Homodimeric domain of signal transducing histidine kinase CheY-like 1714
CheY-like C-terminal effector domain of the bipartite response regulators 151
NAD(P)-binding Rossmann-fold domains Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 156
Acyl-CoA dehydrogenase NM domain-like Acyl-CoA dehydrogenase C-terminal domain-like 142
NAD(P)-binding Rossmann-fold domains 6-phosphogluconate dehydrogenase C-terminal domain-like 146
PYP-like sensor domain (PAS domain) Nucleotide cyclase 1311
Multidrug efflux transporter AcrB transmembrane domain Multidrug efflux transporter AcrB transmembrane domain 136
Thiolase-like Thiolase-like 132
Actin-like ATPase domain Actin-like ATPase domain 134
Composite domain of metallo-dependent hydrolases Metallo-dependent hydrolases 114
PYP-like sensor domain (PAS domain) ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 119
Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains 115
Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains Multidrug efflux transporter AcrB transmembrane domain 115
PYP-like sensor domain (PAS domain) Homodimeric domain of signal transducing histidine kinase 119
Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains Multidrug efflux transporter AcrB transmembrane domain 115
Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains 104
P-loop containing nucleoside triphosphate hydrolases Homeodomain-like 106
Sigma2 domain of RNA polymerase sigma factors Sigma3 and sigma4 domains of RNA polymerase sigma factors 103
GroES-like NAD(P)-binding Rossmann-fold domains 102
DPP6 N-terminal domain-like alpha/beta-Hydrolases 102
Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains 104
Multidrug resistance efflux transporter EmrE Multidrug resistance efflux transporter EmrE 102
PYP-like sensor domain (PAS domain) CheY-like 98
P-loop containing nucleoside triphosphate hydrolases Translation proteins 96
PYP-like sensor domain (PAS domain) EAL domain-like 88
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase Histidine-containing phosphotransfer domain, HPT domain 88
Glutathione synthetase ATP-binding domain-like PreATP-grasp domain 85
Homodimeric domain of signal transducing histidine kinase Histidine-containing phosphotransfer domain, HPT domain 88
"Winged helix" DNA-binding domain Dimeric alpha+beta barrel 81
PYP-like sensor domain (PAS domain) PYP-like sensor domain (PAS domain) 77
CheY-like Histidine-containing phosphotransfer domain, HPT domain 77
CheY-like CheY-like 77
Aminoacid dehydrogenase-like, N-terminal domain NAD(P)-binding Rossmann-fold domains 73
ACT-like ACT-like 74
Sm-like ribonucleoproteins Mechanosensitive channel protein MscS (YggB), C-terminal domain 72
Thioredoxin-like GST C-terminal domain-like 71
Homeodomain-like Homeodomain-like 75
Riboflavin synthase domain-like Ferredoxin reductase-like, C-terminal NADP-linked domain 75
Alpha-L RNA-binding motif Pseudouridine synthase 62
MurD-like peptide ligases, catalytic domain MurD-like peptide ligases, peptide-binding domain 63
Zn-dependent exopeptidases Bacterial exopeptidase dimerisation domain 61
P-loop containing nucleoside triphosphate hydrolases EF-G C-terminal domain-like 64
Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) 64
Cytochrome c Cytochrome c 64
Mechanosensitive channel protein MscS (YggB), transmembrane region Sm-like ribonucleoproteins 61
Nucleotidylyl transferase Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 66
TPR-like TPR-like 65
ABC transporter transmembrane region P-loop containing nucleoside triphosphate hydrolases 61
Mechanosensitive channel protein MscS (YggB), transmembrane region Mechanosensitive channel protein MscS (YggB), C-terminal domain 61
FAD/NAD(P)-binding domain FAD/NAD-linked reductases, dimerisation (C-terminal) domain 52
"Winged helix" DNA-binding domain GntR ligand-binding domain-like 52
P-loop containing nucleoside triphosphate hydrolases Ribosomal protein S5 domain 2-like 54
CheY-like Homeodomain-like 51
CheY-like P-loop containing nucleoside triphosphate hydrolases 51
Nucleic acid-binding proteins Nucleic acid-binding proteins 54
Translation proteins EF-G C-terminal domain-like 53
Formate/glycerate dehydrogenase catalytic domain-like NAD(P)-binding Rossmann-fold domains 53
PLP-binding barrel Alanine racemase C-terminal domain-like 52
Glutathione synthetase ATP-binding domain-like Rudiment single hybrid motif 42
GAF domain-like Nucleotide cyclase 43
LuxS/MPP-like metallohydrolase LuxS/MPP-like metallohydrolase 42
Thiamin diphosphate-binding fold (THDP-binding) TK C-terminal domain-like 43
lambda repressor-like DNA-binding domains Periplasmic binding protein-like I 41
CheY-like Nucleotide cyclase 44
PreATP-grasp domain Rudiment single hybrid motif 42
Nucleic acid-binding proteins Class II aaRS and biotin synthetases 43
HAMP domain-like ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 42
HAMP domain-like Homodimeric domain of signal transducing histidine kinase 42
FAD/NAD(P)-binding domain Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain 43
EF-G C-terminal domain-like EF-G C-terminal domain-like 42
GAF domain-like EAL domain-like 43
FAD/NAD(P)-binding domain FAD-linked reductases, C-terminal domain 42
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase Ribosomal protein S5 domain 2-like 44
Homeodomain-like Tetracyclin repressor-like, C-terminal domain 41
PDZ domain-like ClpP/crotonase 43
LysM domain LysM domain 33
MetI-like MetI-like 31
Leukotriene A4 hydrolase N-terminal domain Metalloproteases ("zincins"), catalytic domain 32
MurCD N-terminal domain MurD-like peptide ligases, peptide-binding domain 31
P-loop containing nucleoside triphosphate hydrolases EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 32
Nucleotidyltransferase HD-domain/PDEase-like 32
GAF domain-like PYP-like sensor domain (PAS domain) 33
Carboxypeptidase regulatory domain-like Porins 33
Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like 33
(Trans)glycosidases Glycosyl hydrolase domain 33
6-phosphogluconate dehydrogenase C-terminal domain-like 6-phosphogluconate dehydrogenase C-terminal domain-like 32
Translation proteins SH3-like domain Nucleic acid-binding proteins 32
Translation proteins EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 32
CBS-domain pair FAD-binding/transporter-associated domain-like 31
ValRS/IleRS/LeuRS editing domain Nucleotidylyl transferase 33
Single hybrid motif Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex 32
Single hybrid motif Single hybrid motif 32
Single hybrid motif CoA-dependent acyltransferases 32
2Fe-2S ferredoxin-like Ferredoxin reductase-like, C-terminal NADP-linked domain 32
Nucleic acid-binding proteins RuvA domain 2-like 33
Carbamate kinase-like ACT-like 33
Ribosomal protein S5 domain 2-like GHMP Kinase, C-terminal domain 31
IlvD/EDD N-terminal domain-like LeuD/IlvD-like 31
Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex CoA-dependent acyltransferases 32
MurCD N-terminal domain MurD-like peptide ligases, catalytic domain 31
P-loop containing nucleoside triphosphate hydrolases post-AAA+ oligomerization domain-like 32
Sigma3 and sigma4 domains of RNA polymerase sigma factors Sigma3 and sigma4 domains of RNA polymerase sigma factors 32
Triger factor/SurA peptide-binding domain-like FKBP-like 33
PYP-like sensor domain (PAS domain) Histidine-containing phosphotransfer domain, HPT domain 33
"Winged helix" DNA-binding domain "Winged helix" DNA-binding domain 32
Peptidase/esterase 'gauge' domain alpha/beta-Hydrolases 31
Nucleotidyltransferase ACT-like 32
PurM N-terminal domain-like PurM C-terminal domain-like 32
ValRS/IleRS/LeuRS editing domain Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 33
Aconitase iron-sulfur domain LeuD/IlvD-like 33
2Fe-2S ferredoxin-like Riboflavin synthase domain-like 32
Class II aaRS and biotin synthetases Class II aaRS ABD-related 33
EspE N-terminal domain-like P-loop containing nucleoside triphosphate hydrolases 32
HD-domain/PDEase-like ACT-like 32
Ribonuclease H-like DNA/RNA polymerases 22
GreA transcript cleavage protein, N-terminal domain FKBP-like 21
ClpP/crotonase ClpP/crotonase 22
Ribosomal protein S5 domain 2-like Ribonuclease PH domain 2-like 22
DsbC/DsbG N-terminal domain-like Thioredoxin-like 21
Carbamate kinase-like NAD(P)-binding Rossmann-fold domains 22
Macro domain-like Zn-dependent exopeptidases 21
Calcium-dependent phosphotriesterase Nucleotide cyclase 22
ClpP/crotonase NAD(P)-binding Rossmann-fold domains 21
Nucleotidyltransferase Nucleotidyltransferase substrate binding subunit/domain 22
HD-domain/PDEase-like TGS-like 21
TPR-like P-loop containing nucleoside triphosphate hydrolases 21
S-adenosyl-L-methionine-dependent methyltransferases S-adenosyl-L-methionine-dependent methyltransferases 22
Riboflavin synthase domain-like Riboflavin synthase domain-like 21
MurE/MurF N-terminal domain MurD-like peptide ligases, catalytic domain 21
Phosphohistidine domain Phosphoenolpyruvate/pyruvate domain 22
PDZ domain-like PDZ domain-like 22
Penicillin binding protein dimerisation domain beta-lactamase/transpeptidase-like 21
ThrRS/AlaRS common domain Class II aaRS and biotin synthetases 22
HMA, heavy metal-associated domain Calcium ATPase, transduction domain A 22
NAD(P)-binding Rossmann-fold domains NAD(P)-binding Rossmann-fold domains 22
Phosphoglucomutase, first 3 domains Phosphoglucomutase, first 3 domains 22
Creatinase/prolidase N-terminal domain Creatinase/aminopeptidase 21
Calcium ATPase, transduction domain A Calcium ATPase, transmembrane domain M 22
P-loop containing nucleoside triphosphate hydrolases MOP-like 21
HAMP domain-like EAL domain-like 22
Succinyl-CoA synthetase domains Glutathione synthetase ATP-binding domain-like 22
N-terminal domain of alpha and beta subunits of F1 ATP synthase P-loop containing nucleoside triphosphate hydrolases 21
Carbamate kinase-like Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 22
TrkA C-terminal domain-like TrkA C-terminal domain-like 22
PYP-like sensor domain (PAS domain) Methyl-accepting chemotaxis protein (MCP) signaling domain 21
L30e-like alpha/beta knot 21
Lysozyme-like beta-lactamase/transpeptidase-like 22
CheY-like TPR-like 22
Actin-like ATPase domain Heat shock protein 70kD (HSP70), peptide-binding domain 21
cAMP-binding domain-like CBS-domain pair 21
FAD/NAD(P)-binding domain Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain 22
PIN domain-like 5' to 3' exonuclease, C-terminal subdomain 22
GAF domain-like GAF domain-like 21
P-loop containing nucleoside triphosphate hydrolases C-terminal domain of alpha and beta subunits of F1 ATP synthase 21
Zinc beta-ribbon Zinc beta-ribbon 22
Nucleotidyltransferase Poly A polymerase C-terminal region-like 21
PYP-like sensor domain (PAS domain) Homeodomain-like 22
Cytochrome c oxidase subunit II-like, transmembrane region Cupredoxins 22
Nucleotidyltransferase TGS-like 21
P-loop containing nucleoside triphosphate hydrolases Restriction endonuclease-like 22
Translation proteins Ribosomal protein S5 domain 2-like 21
Cation efflux protein transmembrane domain-like Cation efflux protein cytoplasmic domain-like 21
Glucocorticoid receptor-like (DNA-binding domain) P-loop containing nucleoside triphosphate hydrolases 22
EF-G C-terminal domain-like Ribosomal protein S5 domain 2-like 21
PA domain Zn-dependent exopeptidases 21
Cryptochrome/photolyase, N-terminal domain Cryptochrome/photolyase FAD-binding domain 22
Nucleic acid-binding proteins Thioesterase/thiol ester dehydrase-isomerase 22
Sensory domain-like ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 22
P-loop containing nucleoside triphosphate hydrolases "Winged helix" DNA-binding domain 22
Cupredoxins Cupredoxins 22
Thiamin diphosphate-binding fold (THDP-binding) DHS-like NAD/FAD-binding domain 21
Double Clp-N motif P-loop containing nucleoside triphosphate hydrolases 22
Thioesterase/thiol ester dehydrase-isomerase Thioesterase/thiol ester dehydrase-isomerase 21
Chaperone J-domain HSP40/DnaJ peptide-binding domain 22
GAF domain-like ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 22
Nucleic acid-binding proteins P-loop containing nucleoside triphosphate hydrolases 22
NAD(P)-binding Rossmann-fold domains TrkA C-terminal domain-like 22
P-loop containing nucleoside triphosphate hydrolases Class I glutamine amidotransferase-like 22
Phospholipase D/nuclease Phospholipase D/nuclease 22
NAD(P)-binding Rossmann-fold domains Succinyl-CoA synthetase domains 22
Cupredoxins Cytochrome c 22
Trypsin-like serine proteases PDZ domain-like 22
GAF domain-like Homodimeric domain of signal transducing histidine kinase 22
"Winged helix" DNA-binding domain NagB/RpiA/CoA transferase-like 21
Lysozyme-like LysM domain 22
Ribosomal protein S5 domain 2-like Type II DNA topoisomerase 22
Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain 22
CBS-domain pair MgtE membrane domain-like 21
Actin-like ATPase domain Heat shock protein 70kD (HSP70), C-terminal subdomain 21
MurE/MurF N-terminal domain MurD-like peptide ligases, peptide-binding domain 21
Type II DNA topoisomerase GyrA/ParC C-terminal domain-like 22
Sensory domain-like Homodimeric domain of signal transducing histidine kinase 22
Heat shock protein 70kD (HSP70), peptide-binding domain Heat shock protein 70kD (HSP70), C-terminal subdomain 21
Calcium ATPase, transduction domain A HAD-like 22
Nucleotidylyl transferase Alpha-L RNA-binding motif 21
GAF domain-like CheY-like 22
Folate-binding domain Aminomethyltransferase beta-barrel domain 21
HMA, heavy metal-associated domain Calcium ATPase, transmembrane domain M 22
FAD/NAD(P)-binding domain FAD/NAD(P)-binding domain 21
GroES-like GroES-like 21
Aldolase post-HMGL domain-like 22
TGS-like ACT-like 21
EAL domain-like HD-domain/PDEase-like 21
CheY-like EAL domain-like 22
tRNA-binding arm Class II aaRS and biotin synthetases 21
Enolase N-terminal domain-like Enolase C-terminal domain-like 21
Carbamate kinase-like PUA domain-like 21
N-terminal domain of alpha and beta subunits of F1 ATP synthase C-terminal domain of alpha and beta subunits of F1 ATP synthase 21
FMN-linked oxidoreductases FAD/NAD(P)-binding domain 22
PYP-like sensor domain (PAS domain) P-loop containing nucleoside triphosphate hydrolases 22
HAMP domain-like Nucleotide cyclase 22
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase Type II DNA topoisomerase 22
MgtE N-terminal domain-like MgtE membrane domain-like 21
HMA, heavy metal-associated domain HAD-like 22
HSP40/DnaJ peptide-binding domain HSP40/DnaJ peptide-binding domain 22
ClpP/crotonase 6-phosphogluconate dehydrogenase C-terminal domain-like 21
NAD(P)-binding Rossmann-fold domains ACT-like 22
DNA ligase/mRNA capping enzyme, catalytic domain Nucleic acid-binding proteins 22
Calcium ATPase, transmembrane domain M HAD-like 22
MgtE N-terminal domain-like CBS-domain pair 21
Phosphoglucomutase, first 3 domains Phosphoglucomutase, C-terminal domain 22
PUA domain-like alpha/beta knot 11
all-alpha NTP pyrophosphatases all-alpha NTP pyrophosphatases 11
NAD(P)-binding Rossmann-fold domains Siroheme synthase middle domains-like 11
PurM C-terminal domain-like Class I glutamine amidotransferase-like 11
Periplasmic binding protein-like II GlnB-like 11
HisI-like all-alpha NTP pyrophosphatases 11
Metalloproteases ("zincins"), catalytic domain ARM repeat 11
Nitrite/Sulfite reductase N-terminal domain-like Nitrite and sulphite reductase 4Fe-4S domain-like 11
Methionyl-tRNA synthetase (MetRS), Zn-domain Nucleotidylyl transferase 11
Methionine synthase domain Methionine synthase activation domain-like 11
Bacterial muramidases Lysozyme-like 11
Succinyl-CoA synthetase domains Acyl-CoA N-acyltransferases (Nat) 11
DPP6 N-terminal domain-like DPP6 N-terminal domain-like 11
DPP6 N-terminal domain-like Composite domain of metallo-dependent hydrolases 11
Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain Nucleotidylyl transferase 11
Aconitase B, N-terminal domain LeuD/IlvD-like 11
ALDH-like ALDH-like 11
Regulatory protein AraC Homeodomain-like 11
Diaminopimelate epimerase-like Diaminopimelate epimerase-like 11
Translation proteins Initiation factor IF2/eIF5b, domain 3 11
PheT/TilS domain Class II aaRS and biotin synthetases 11
DNA repair protein MutS, domain I DNA repair protein MutS, domain III 11
Obg GTP-binding protein N-terminal domain P-loop containing nucleoside triphosphate hydrolases 11
PUA domain-like S-adenosyl-L-methionine-dependent methyltransferases 11
Peptide methionine sulfoxide reductase Thioredoxin-like 11
FAD-binding/transporter-associated domain-like FAD-linked oxidases, C-terminal domain 11
Metallo-hydrolase/oxidoreductase Rhodanese/Cell cycle control phosphatase 11
5' to 3' exonuclease, C-terminal subdomain DNA/RNA polymerases 11
CBS-domain pair CBS-domain pair 11
Class I glutamine amidotransferase-like GMP synthetase C-terminal dimerisation domain 11
Ada DNA repair protein, N-terminal domain (N-Ada 10) DNA-glycosylase 11
Thermostable phytase (3-phytase) Thermostable phytase (3-phytase) 11
TGS-like Class II aaRS and biotin synthetases 11
DeoB insert domain-like Alkaline phosphatase-like 11
NagB/RpiA/CoA transferase-like NagB/RpiA/CoA transferase-like 11
RBP11-like subunits of RNA polymerase C-terminal domain of RNA polymerase alpha subunit 11
E set domains (Trans)glycosidases 11
Invasin/intimin cell-adhesion fragments Invasin/intimin cell-adhesion fragments 11
Zinc beta-ribbon DNA primase DnaG, C-terminal domain 11
N-terminal domain of bifunctional PutA protein FAD-linked oxidoreductase 11
PIN domain-like P-loop containing nucleoside triphosphate hydrolases 11
Thioredoxin-like Mss4-like 11
CheY-like PP2C-like 11
Histidine-containing phosphotransfer domain, HPT domain CheW-like 11
Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 Nucleic acid-binding proteins 11
CheC-like Surface presentation of antigens (SPOA) 11
Nucleotidyltransferase substrate binding subunit/domain HD-domain/PDEase-like 11
DNA repair protein MutS, domain I P-loop containing nucleoside triphosphate hydrolases 11
"Winged helix" DNA-binding domain GAF domain-like 11
P-loop containing nucleoside triphosphate hydrolases TGS-like 11
vWA-like TPR-like 11
DNA repair protein MutS, domain II DNA repair protein MutS, domain III 11
Formyltransferase FMT C-terminal domain-like 11
Class II aaRS and biotin synthetases C-terminal domain of transcriptional repressors 11
Domain of the SRP/SRP receptor G-proteins P-loop containing nucleoside triphosphate hydrolases 11
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase CheW-like 11
PurS-like Class I glutamine amidotransferase-like 11
Tex N-terminal region-like RuvA domain 2-like 11
HAD-like Ribosomal protein S5 domain 2-like 11
Thiol:disulfide interchange protein DsbD, N-terminal domain (DsbD-alpha) Thioredoxin-like 11
CBS-domain pair Nucleotide cyclase 11
GspK insert domain-like GspK insert domain-like 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) FMN-linked oxidoreductases 11
Insert subdomain of RNA polymerase alpha subunit C-terminal domain of RNA polymerase alpha subunit 11
5' to 3' exonuclease, C-terminal subdomain Ribonuclease H-like 11
N-terminal domain of DnaB helicase P-loop containing nucleoside triphosphate hydrolases 11
Nqo1 FMN-binding domain-like alpha-helical ferredoxin 11
Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases Nucleic acid-binding proteins 11
6-phosphogluconate dehydrogenase C-terminal domain-like UDP-glucose/GDP-mannose dehydrogenase C-terminal domain 11
"Winged helix" DNA-binding domain C-terminal domain of arginine repressor 11
Leukotriene A4 hydrolase N-terminal domain ARM repeat 11
TrkA C-terminal domain-like FAD-binding/transporter-associated domain-like 11
dsRNA-binding domain-like Ribosomal protein S5 domain 2-like 11
HIT-like HIT-like 11
NAD(P)-binding Rossmann-fold domains LDH C-terminal domain-like 11
HAMP domain-like CheY-like 11
DNA repair protein MutS, domain II P-loop containing nucleoside triphosphate hydrolases 11
Ribosomal protein S5 domain 2-like DNA mismatch repair protein MutL 11
Glutathione synthetase ATP-binding domain-like Carbamoyl phosphate synthetase, large subunit connection domain 11
Chorismate mutase II NAD(P)-binding Rossmann-fold domains 11
DNA primase core DNA primase DnaG, C-terminal domain 11
PK beta-barrel domain-like Phosphoenolpyruvate/pyruvate domain 11
HesB-like domain Fe-S cluster assembly (FSCA) domain-like 11
Methionyl-tRNA synthetase (MetRS), Zn-domain Nucleic acid-binding proteins 11
Ribosomal protein S5 domain 2-like Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 11
NagB/RpiA/CoA transferase-like alpha-helical ferredoxin 11
Calcium-dependent phosphotriesterase Calcium-dependent phosphotriesterase 11
Ribonuclease H-like mu transposase, C-terminal domain 11
Prokaryotic type KH domain (KH-domain type II) Ribosomal protein S3 C-terminal domain 11
TPR-like HCP-like 11
Homo-oligomeric flavin-containing Cys decarboxylases, HFCD CoaB-like 11
Nucleotide-diphospho-sugar transferases RmlC-like cupins 11
CBS-domain pair Inosine monophosphate dehydrogenase (IMPDH) 11
CheW-like CheY-like 11
TPR-like ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 11
FliG FliG 11
NAD(P)-binding Rossmann-fold domains Tetrapyrrole methylase 11
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase HSP90 C-terminal domain 11
Metallo-dependent phosphatases 5'-nucleotidase (syn. UDP-sugar hydrolase), C-terminal domain 11
PreATP-grasp domain Methylglyoxal synthase-like 11
Nucleic acid-binding proteins GAD domain-like 11
RmlC-like cupins Homeodomain-like 11
Voltage-gated potassium channels Periplasmic binding protein-like II 11
Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 11
Zinc beta-ribbon DNA primase core 11
Nucleic acid-binding proteins ArfGap/RecO-like zinc finger 11
Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) ThrRS/AlaRS common domain 11
NagB/RpiA/CoA transferase-like D-ribose-5-phosphate isomerase (RpiA), lid domain 11
THUMP domain-like Rhodanese/Cell cycle control phosphatase 11
Subtilisin-like Galactose-binding domain-like 11
Putative DNA-binding domain Initiation factor IF2/eIF5b, domain 3 11
DNA/RNA polymerases Lesion bypass DNA polymerase (Y-family), little finger domain 11
Pectin lyase-like Pectin lyase-like 11
Calcium-dependent phosphotriesterase NHL repeat 11
"Winged helix" DNA-binding domain C-terminal domain of transcriptional repressors 11
Flavoproteins Riboflavin synthase domain-like 11
ACT-like P-loop containing nucleoside triphosphate hydrolases 11
Rudiment single hybrid motif Single hybrid motif 11
Class II aaRS and biotin synthetases GAD domain-like 11
Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) Translation proteins 11
PurS-like FGAM synthase PurL, linker domain 11
CBD9-like ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) SIS domain 11
Ada DNA repair protein, N-terminal domain (N-Ada 10) TATA-box binding protein-like 11
Epsilon subunit of F1F0-ATP synthase N-terminal domain Epsilon subunit of F1F0-ATP synthase C-terminal domain 11
PreATP-grasp domain PreATP-grasp domain 11
Cobalamin (vitamin B12)-binding domain Methionine synthase activation domain-like 11
Fumarylacetoacetate hydrolase, FAH, N-terminal domain FAH 11
Putative DNA-binding domain P-loop containing nucleoside triphosphate hydrolases 11
Transcription factor NusA, N-terminal domain Rad51 N-terminal domain-like 11
P-loop containing nucleoside triphosphate hydrolases FtsH protease domain-like 11
DNA methylase specificity domain DNA methylase specificity domain 11
DNA clamp DNA clamp 11
YbaK/ProRS associated domain Class II aaRS ABD-related 11
Glutathione synthetase ATP-binding domain-like Methylglyoxal synthase-like 11
Quinoprotein alcohol dehydrogenase-like PYP-like sensor domain (PAS domain) 11
P-loop containing nucleoside triphosphate hydrolases HRDC-like 11
Adenine nucleotide alpha hydrolases-like PheT/TilS domain 11
Aconitase B, N-terminal domain Aconitase iron-sulfur domain 11
FGAM synthase PurL, linker domain Class I glutamine amidotransferase-like 11
Peptide methionine sulfoxide reductase Mss4-like 11
Sensory domain-like CheY-like 11
GroEL equatorial domain-like GroEL-intermediate domain like 11
Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain Phosphoenolpyruvate/pyruvate domain 11
YrdC/RibB RibA-like 11
RNase III domain-like dsRNA-binding domain-like 11
Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases tRNA-binding arm 11
Tricorn protease N-terminal domain DPP6 N-terminal domain-like 11
Insert subdomain of RNA polymerase alpha subunit RBP11-like subunits of RNA polymerase 11
CheY-like CheC-like 11
RuvA domain 2-like JAB1/MPN domain 11
Dihydropteroate synthetase-like Nitrite and sulphite reductase 4Fe-4S domain-like 11
Glutamine synthetase, N-terminal domain Glutamine synthetase/guanido kinase 11
Nucleic acid-binding proteins BRCT domain 11
Putative DNA-binding domain Anticodon-binding domain of PheRS 11
Homeodomain-like TATA-box binding protein-like 11
FKBP-like FKBP-like 11
Pili subunits GspK insert domain-like 11
alpha-helical ferredoxin Nucleotide-binding domain 11
PK beta-barrel domain-like PK C-terminal domain-like 11
MesJ substrate recognition domain-like PheT/TilS domain 11
Class II aaRS and biotin synthetases Translation proteins 11
P-loop containing nucleoside triphosphate hydrolases C-terminal UvrC-binding domain of UvrB 11
Nucleotide-binding domain Nucleotide-binding domain 11
P-loop containing nucleoside triphosphate hydrolases Prokaryotic type KH domain (KH-domain type II) 11
RmlC-like cupins RmlC-like cupins 11
FAD-linked oxidases, C-terminal domain alpha-helical ferredoxin 11
Dihydropteroate synthetase-like Methionine synthase domain 11
TrmE connector domain P-loop containing nucleoside triphosphate hydrolases 11
2,3-Bisphosphoglycerate-independent phosphoglycerate mutase, substrate-binding domain Alkaline phosphatase-like 11
HAMP domain-like Histidine-containing phosphotransfer domain, HPT domain 11
Eukaryotic type KH-domain (KH-domain type I) Nucleic acid-binding proteins 11
Nucleotide-diphospho-sugar transferases PilZ domain-like 11
OMPA-like OmpA-like 11
N-terminal domain of MutM-like DNA repair proteins S13-like H2TH domain 11
PLP-dependent transferases Rhodanese/Cell cycle control phosphatase 11
R1 subunit of ribonucleotide reductase, N-terminal domain PFL-like glycyl radical enzymes 11
Chorismate mutase II 6-phosphogluconate dehydrogenase C-terminal domain-like 11
Methylated DNA-protein cysteine methyltransferase domain Methylated DNA-protein cysteine methyltransferase, C-terminal domain 11
YWTD domain Nucleotide cyclase 11
Nitrite and sulphite reductase 4Fe-4S domain-like Nitrite and sulphite reductase 4Fe-4S domain-like 11
Zn-dependent exopeptidases Class I glutamine amidotransferase-like 11
Siroheme synthase middle domains-like Tetrapyrrole methylase 11
N-terminal domain of MutM-like DNA repair proteins Glucocorticoid receptor-like (DNA-binding domain) 11
NAD(P)-binding Rossmann-fold domains Glutathione synthetase ATP-binding domain-like 11
PIN domain-like DNA/RNA polymerases 11
GIY-YIG endonuclease RuvA domain 2-like 11
S-adenosylmethionine synthetase S-adenosylmethionine synthetase 11
Adenine nucleotide alpha hydrolases-like GMP synthetase C-terminal dimerisation domain 11
Aspartate/glutamate racemase Aspartate/glutamate racemase 11
Phosphoenolpyruvate/pyruvate domain PK C-terminal domain-like 11
(Trans)glycosidases Beta-D-glucan exohydrolase, C-terminal domain 11
Rad51 N-terminal domain-like Rad51 N-terminal domain-like 11
Putative DNA-binding domain Class II aaRS and biotin synthetases 11
Adenine nucleotide alpha hydrolases-like MesJ substrate recognition domain-like 11
Quinoprotein alcohol dehydrogenase-like Nucleotide cyclase 11
TPR-like TolA/TonB C-terminal domain 11
Nucleotidyltransferase Nucleotidyltransferase 11
Sensory domain-like PYP-like sensor domain (PAS domain) 11
Adenine nucleotide alpha hydrolases-like Argininosuccinate synthetase, C-terminal domain 11
PUA domain-like P-loop containing nucleoside triphosphate hydrolases 11
Tryptophan synthase beta subunit-like PLP-dependent enzymes ACT-like 11
TerB-like Chaperone J-domain 11
Fe,Mn superoxide dismutase (SOD), N-terminal domain Fe,Mn superoxide dismutase (SOD), C-terminal domain 11
Class I glutamine amidotransferase-like Adenine nucleotide alpha hydrolases-like 11
NAD(P)-binding Rossmann-fold domains UDP-glucose/GDP-mannose dehydrogenase C-terminal domain 11
NTF2-like Sec-C motif 11
P-loop containing nucleoside triphosphate hydrolases Zn-binding ribosomal proteins 11
Rho N-terminal domain-like Nucleic acid-binding proteins 11
Ribbon-helix-helix Replication modulator SeqA, C-terminal DNA-binding domain 11
Putative DNA-binding domain Translation proteins 11
P-loop containing nucleoside triphosphate hydrolases Pre-protein crosslinking domain of SecA 11
GAF domain-like Phosphoenolpyruvate/pyruvate domain 11
P-loop containing nucleoside triphosphate hydrolases Acyl-CoA N-acyltransferases (Nat) 11
YajQ-like YajQ-like 11
DnaJ/Hsp40 cysteine-rich domain HSP40/DnaJ peptide-binding domain 11
Homeodomain-like DNA-glycosylase 11
Globin-like Ferredoxin reductase-like, C-terminal NADP-linked domain 11
P-loop containing nucleoside triphosphate hydrolases Signal peptide-binding domain 11
Ribosomal protein S5 domain 2-like Nucleic acid-binding proteins 11
FAD-linked oxidoreductase ALDH-like 11
Transcription factor NusA, N-terminal domain Prokaryotic type KH domain (KH-domain type II) 11
Actin-like ATPase domain HD-domain/PDEase-like 11
Glutathione synthetase ATP-binding domain-like Glutathione synthetase ATP-binding domain-like 11
TolB, N-terminal domain Tricorn protease N-terminal domain 11
Aldolase 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain 11
UBA-like Elongation factor Ts (EF-Ts), dimerisation domain 11
L domain-like Protein kinase-like (PK-like) 11
lambda integrase-like, N-terminal domain DNA breaking-rejoining enzymes 11
Methionyl-tRNA synthetase (MetRS), Zn-domain Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 11
GAF domain-like Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain 11
DNase I-like Cadherin-like 11
Class I glutamine amidotransferase-like LD-carboxypeptidase A C-terminal domain-like 11
Ribosomal protein S5 domain 2-like Eukaryotic type KH-domain (KH-domain type I) 11
Transmembrane di-heme cytochromes a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) 11
Chorismate mutase II ACT-like 11
Aldolase Single hybrid motif 11
FAD-linked reductases, C-terminal domain 4Fe-4S ferredoxins 11
Ribosomal L11/L12e N-terminal domain Ribosomal protein L11, C-terminal domain 11
Starch-binding domain-like Porins 11
PurM N-terminal domain-like PurM N-terminal domain-like 11
FAD-binding/transporter-associated domain-like alpha-helical ferredoxin 11
L-aspartase-like Acyl-CoA N-acyltransferases (Nat) 11
TPR-like LysM domain 11
Galactose mutarotase-like E set domains 11
Class II aaRS and biotin synthetases YbaK/ProRS associated domain 11
Nucleotidyltransferase substrate binding subunit/domain Nucleotidyltransferase substrate binding subunit/domain 11
Ribonuclease H-like HRDC-like 11
PheT/TilS domain Putative DNA-binding domain 11
Coiled-coil domain of nucleotide exchange factor GrpE Head domain of nucleotide exchange factor GrpE 11
Tex N-terminal region-like Ribonuclease H-like 11
Methionine synthase domain Cobalamin (vitamin B12)-binding domain 11
PilZ domain-like PilZ domain-like 11
Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 11
Prokaryotic type I DNA topoisomerase Zinc beta-ribbon 11
Hsp33 domain HSP33 redox switch-like 11
DnaK suppressor protein DksA, alpha-hairpin domain Glucocorticoid receptor-like (DNA-binding domain) 11
NAD(P)-binding Rossmann-fold domains Glutamyl tRNA-reductase dimerization domain 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) Alpha subunit of glutamate synthase, C-terminal domain 11
Tricorn protease N-terminal domain ClpP/crotonase 11
PheT/TilS domain Anticodon-binding domain of PheRS 11
PurM C-terminal domain-like PurM C-terminal domain-like 11
Composite domain of metallo-dependent hydrolases Composite domain of metallo-dependent hydrolases 11
FGAM synthase PurL, linker domain PurM C-terminal domain-like 11
NAD(P)-binding Rossmann-fold domains Acyl-CoA N-acyltransferases (Nat) 11
CheY-like HD-domain/PDEase-like 11
Glutathione synthetase ATP-binding domain-like Phosphohistidine domain 11
Methylglyoxal synthase-like Cytidine deaminase-like 11
Periplasmic binding protein-like II Lysozyme-like 11
Dihydropteroate synthetase-like Methionine synthase activation domain-like 11
PLP-dependent transferases Metallo-hydrolase/oxidoreductase 11
post-HMGL domain-like Single hybrid motif 11
RuvA domain 2-like DNA helicase RuvA subunit, C-terminal domain 11
Nucleic acid-binding proteins Anticodon-binding domain of PheRS 11
FGAM synthase PurL, linker domain PurM N-terminal domain-like 11
PurM N-terminal domain-like Class I glutamine amidotransferase-like 11
GAF domain-like P-loop containing nucleoside triphosphate hydrolases 11
DinB/YfiT-like putative metalloenzymes C-type lectin-like 11
Nucleic acid-binding proteins Prokaryotic type KH domain (KH-domain type II) 11
PreATP-grasp domain Single hybrid motif 11
TGS-like ThrRS/AlaRS common domain 11
Phase 1 flagellin Phase 1 flagellin 11
RuvA domain 2-like BRCT domain 11
P-loop containing nucleoside triphosphate hydrolases Helical scaffold and wing domains of SecA 11
NHL repeat Nucleotide cyclase 11
Trigger factor ribosome-binding domain FKBP-like 11
ThrRS/AlaRS common domain Class II aaRS ABD-related 11
YWTD domain NHL repeat 11
THUMP domain-like Adenine nucleotide alpha hydrolases-like 11
DPP6 N-terminal domain-like PDZ domain-like 11
PLP-dependent transferases PLP-dependent transferases 11
Adenine nucleotide alpha hydrolases-like DHS-like NAD/FAD-binding domain 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) Adenine nucleotide alpha hydrolases-like 11
Prokaryotic type KH domain (KH-domain type II) Rad51 N-terminal domain-like 11
PLP-dependent transferases Ornithine decarboxylase C-terminal domain 11
Nucleotidylyl transferase Riboflavin kinase-like 11
Nucleotide-diphospho-sugar transferases Trimeric LpxA-like enzymes 11
N-utilization substance G protein NusG, N-terminal domain Translation proteins SH3-like domain 11
PurS-like PurM C-terminal domain-like 11
Nucleotidylyl transferase An anticodon-binding domain of class I aminoacyl-tRNA synthetases 11
FMN-linked oxidoreductases Nucleotide-binding domain 11
Nucleotidylyl transferase Ribosomal protein L25-like 11
"Winged helix" DNA-binding domain LexA/Signal peptidase 11
Ribosomal protein L7/12, oligomerisation (N-terminal) domain ClpS-like 11
PA domain Subtilisin-like 11
TATA-box binding protein-like DNA-glycosylase 11
C-terminal UvrC-binding domain of UvrB RuvA domain 2-like 11
NAD(P)-binding Rossmann-fold domains 1-deoxy-D-xylulose-5-phosphate reductoisomerase, C-terminal domain 11
DNA ligase/mRNA capping enzyme, catalytic domain BRCT domain 11
Cysteine proteinases PreATP-grasp domain 11
Cytidine deaminase-like Dihydrofolate reductase-like 11
Ada DNA repair protein, N-terminal domain (N-Ada 10) Homeodomain-like 11
Transcription factor NusA, N-terminal domain Nucleic acid-binding proteins 11
Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain Phosphohistidine domain 11
Chemotaxis receptor methyltransferase CheR, N-terminal domain S-adenosyl-L-methionine-dependent methyltransferases 11
P-loop containing nucleoside triphosphate hydrolases Initiation factor IF2/eIF5b, domain 3 11
Periplasmic binding protein-like II Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain 11
CBS-domain pair PYP-like sensor domain (PAS domain) 11
Carbamoyl phosphate synthetase, large subunit connection domain Methylglyoxal synthase-like 11
Glutamyl tRNA-reductase catalytic, N-terminal domain Glutamyl tRNA-reductase dimerization domain 11
FAD/NAD(P)-binding domain 4Fe-4S ferredoxins 11
GroEL equatorial domain-like GroEL apical domain-like 11
Subtilisin-like PKD domain 11
Nucleic acid-binding proteins Rad51 N-terminal domain-like 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) PRTase-like 11
Acyl-CoA N-acyltransferases (Nat) Thioesterase/thiol ester dehydrase-isomerase 11
GIY-YIG endonuclease C-terminal UvrC-binding domain of UvrB 11
TPR-like Histidine-containing phosphotransfer domain, HPT domain 11
Nitrite/Sulfite reductase N-terminal domain-like Nitrite/Sulfite reductase N-terminal domain-like 11
Class I glutamine amidotransferase-like Homeodomain-like 11
Flavoproteins Ferredoxin reductase-like, C-terminal NADP-linked domain 11
Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain 11
Ribonuclease H-like RuvA domain 2-like 11
FAD/NAD(P)-binding domain HI0933 insert domain-like 11
Ribonuclease PH domain 2-like Eukaryotic type KH-domain (KH-domain type I) 11
Transposase IS200-like TrpR-like 11
DNA repair protein MutS, domain III P-loop containing nucleoside triphosphate hydrolases 11
Sensory domain-like Methyl-accepting chemotaxis protein (MCP) signaling domain 11
Metallo-dependent phosphatases Concanavalin A-like lectins/glucanases 11
Ribonuclease PH domain 2-like Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 11
DNA ligase/mRNA capping enzyme, catalytic domain RuvA domain 2-like 11
Glutamyl tRNA-reductase catalytic, N-terminal domain NAD(P)-binding Rossmann-fold domains 11
L9 N-domain-like Ribosomal protein L9 C-domain 11
RuvA domain 2-like RuvA domain 2-like 11
CBD9-like Homodimeric domain of signal transducing histidine kinase 11
ACT-like Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 11
Glutathione synthetase ATP-binding domain-like Single hybrid motif 11
Ribokinase-like Nucleotidylyl transferase 11
Translation proteins PRC-barrel domain 11
DPP6 N-terminal domain-like ClpP/crotonase 11
alpha/beta-Hydrolases OsmC-like 11
Tubulin nucleotide-binding domain-like Tubulin C-terminal domain-like 11
Cytidine deaminase-like Cytidine deaminase-like 11
Voltage-gated potassium channels NAD(P)-binding Rossmann-fold domains 11
Zn-dependent exopeptidases Fibronectin type III 11
DNA-glycosylase Nudix 11
Elongation factor Ts (EF-Ts), dimerisation domain Elongation factor Ts (EF-Ts), dimerisation domain 11
Ribonuclease PH domain 2-like Ribonuclease PH domain 2-like 11
NusB-like S-adenosyl-L-methionine-dependent methyltransferases 11
Thioredoxin-like TPR-like 11
Homodimeric domain of signal transducing histidine kinase CheW-like 11
Adenine nucleotide alpha hydrolases-like Rhodanese/Cell cycle control phosphatase 11
Ribosomal protein L6 Ribosomal protein L6 11
DNA repair protein MutS, domain I DNA repair protein MutS, domain II 11
P-loop containing nucleoside triphosphate hydrolases RecA protein, C-terminal domain 11
Globin-like Riboflavin synthase domain-like 11
Galactose-binding domain-like PKD domain 11
Nucleotidylyl transferase tRNA-binding arm 11
P-loop containing nucleoside triphosphate hydrolases CarD-like 11
Glutathione synthetase ATP-binding domain-like Phosphoenolpyruvate/pyruvate domain 11
GAF domain-like Homeodomain-like 11
YjgF-like YjgF-like 11
CBS-domain pair EAL domain-like 11
Formate/glycerate dehydrogenase catalytic domain-like ACT-like 11
P-loop containing nucleoside triphosphate hydrolases TrpR-like 11
Urease metallochaperone UreE, N-terminal domain Urease metallochaperone UreE, C-terminal domain 11
Zn-dependent exopeptidases LysM domain 11
Class II aaRS and biotin synthetases Anticodon-binding domain of PheRS 11
Cytochrome c oxidase subunit II-like, transmembrane region Cytochrome c 11
Nucleotide-binding domain FAD/NAD(P)-binding domain 11
Nicotinate/Quinolinate PRTase N-terminal domain-like Nicotinate/Quinolinate PRTase C-terminal domain-like 11
Nucleotidylyl transferase Nucleic acid-binding proteins 11
Lamin A/C globular tail domain DNase I-like 11
CorA soluble domain-like Magnesium transport protein CorA, transmembrane region 11
ISP domain Bet v1-like 11
(Phosphotyrosine protein) phosphatases II NAD kinase/diacylglycerol kinase-like 11
ACT-like Homeodomain-like 11
(Trans)glycosidases Glycoside hydrolase/deacetylase 11
Nucleic acid-binding proteins PheT/TilS domain 11
Nucleic acid-binding proteins Putative DNA-binding domain 11
CheY-like Methylesterase CheB, C-terminal domain 11
GroEL-intermediate domain like GroEL apical domain-like 11
Ribosomal protein S5 domain 2-like HSP90 C-terminal domain 11
N-terminal domain of bifunctional PutA protein ALDH-like 11
Acyl-CoA N-acyltransferases (Nat) Carbon-nitrogen hydrolase 11
Nucleic acid-binding proteins DNA helicase RuvA subunit, C-terminal domain 11
Ribonuclease PH domain 2-like Nucleic acid-binding proteins 11
DPP6 N-terminal domain-like Metallo-dependent hydrolases 11
HRDC-like HRDC-like 11
Ribulose-phoshate binding barrel Ribulose-phoshate binding barrel 11
Tex N-terminal region-like Nucleic acid-binding proteins 11
Translation proteins Translation proteins 11
PUA domain-like Ribosomal protein S5 domain 2-like 11
"Winged helix" DNA-binding domain PLP-dependent transferases 11
ACT-like Formyltransferase 11
Rhodanese/Cell cycle control phosphatase Rhodanese/Cell cycle control phosphatase 11
cAMP-binding domain-like "Winged helix" DNA-binding domain 11
"Winged helix" DNA-binding domain Chorismate lyase-like 11
beta-lactamase/transpeptidase-like Penicillin-binding protein associated domain 11
Quinoprotein alcohol dehydrogenase-like EAL domain-like 11
ACT-like PYP-like sensor domain (PAS domain) 11
CarD-like TRCF domain-like 11
S13-like H2TH domain Glucocorticoid receptor-like (DNA-binding domain) 11
Succinyl-CoA synthetase domains Succinyl-CoA synthetase domains 11
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase DNA mismatch repair protein MutL 11
Cysteine proteinases Glutathione synthetase ATP-binding domain-like 11
Chorismate mutase II Periplasmic binding protein-like II 11
PIN domain-like Ribonuclease H-like 11
Chaperone J-domain DnaJ/Hsp40 cysteine-rich domain 11
FMN-binding split barrel "Winged helix" DNA-binding domain 11
TGS-like Class II aaRS ABD-related 11
Glutathione synthetase ATP-binding domain-like Acyl-CoA N-acyltransferases (Nat) 11
FAD-binding/transporter-associated domain-like Uridine diphospho-N-Acetylenolpyruvylglucosamine reductase, MurB, C-terminal domain 11
Lamin A/C globular tail domain Cadherin-like 11
P-loop containing nucleoside triphosphate hydrolases TRCF domain-like 11
S-adenosyl-L-methionine-dependent methyltransferases Putative methyltransferase TM0872, insert domain 11
Prokaryotic type KH domain (KH-domain type II) Prokaryotic type KH domain (KH-domain type II) 11
Adenine nucleotide alpha hydrolases-like Adenine nucleotide alpha hydrolases-like 11
Thioredoxin-like FAD/NAD(P)-binding domain 11
FMN-binding split barrel UbiD C-terminal domain-like 11
Nucleic acid-binding proteins S-adenosyl-L-methionine-dependent methyltransferases 11
FMN-linked oxidoreductases Alpha subunit of glutamate synthase, C-terminal domain 11
Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 Eukaryotic type KH-domain (KH-domain type I) 11
Trigger factor ribosome-binding domain Triger factor/SurA peptide-binding domain-like 11
Ribokinase-like Thiamin phosphate synthase 11
Pre-protein crosslinking domain of SecA Helical scaffold and wing domains of SecA 11
Tetrahydrobiopterin biosynthesis enzymes-like Tetrahydrobiopterin biosynthesis enzymes-like 11
E set domains Glycosyl hydrolase domain 11
Rho N-terminal domain-like P-loop containing nucleoside triphosphate hydrolases 11
Periplasmic binding protein-like II ACT-like 11
Tricorn protease N-terminal domain PDZ domain-like 11
YhbC-like, N-terminal domain YhbC-like, C-terminal domain 11
ValRS/IleRS/LeuRS editing domain tRNA-binding arm 11
Barwin-like endoglucanases Sporulation related repeat 11
PEP carboxykinase N-terminal domain PEP carboxykinase-like 11
GAF domain-like Phosphohistidine domain 11
Chaperone J-domain HSC20 (HSCB), C-terminal oligomerisation domain 11
Ribonuclease H-like Nucleic acid-binding proteins 11
Thioredoxin-like Thioredoxin-like 11
Fibronectin type III Fibronectin type III 11
PurS-like PurM N-terminal domain-like 11
Translation proteins ThrRS/AlaRS common domain 11
2Fe-2S ferredoxin-like alpha-helical ferredoxin 11
Calcium-dependent phosphotriesterase YWTD domain 11
Carbamoyl phosphate synthetase, small subunit N-terminal domain Class I glutamine amidotransferase-like 11
FabD/lysophospholipase-like Probable ACP-binding domain of malonyl-CoA ACP transacylase 11
PreATP-grasp domain Carbamoyl phosphate synthetase, large subunit connection domain 11
Translation initiation factor IF3, N-terminal domain Translation initiation factor IF3, C-terminal domain 11
WD40 repeat-like MetI-like 11
Metalloproteases ("zincins"), catalytic domain PDZ domain-like 11
Nucleotidyltransferase substrate binding subunit/domain ACT-like 11
Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 1-deoxy-D-xylulose-5-phosphate reductoisomerase, C-terminal domain 11
Class II aaRS and biotin synthetases Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) 11
HAMP domain-like PYP-like sensor domain (PAS domain) 11
Dihydropteroate synthetase-like Cobalamin (vitamin B12)-binding domain 11
TPR-like Homodimeric domain of signal transducing histidine kinase 11
"Winged helix" DNA-binding domain Class II aaRS and biotin synthetases 11

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