SUPERFAMILY 1.75 HMM library and genome assignments server

Domain combination pairs in Desulfovibrio aespoeensis Aspo-2

All pairs of domain combinations at the superfamily level are listed here.
The identification of domain pairs does not account for the possibility of non-contiguous domains. Inserted, or interlaced, domains are seen as having a simple pair ordering.

  • For a list of unique full length architectures for this genome click here (can be slow).
Adjacent domain pairs graph

Graph of adjacent domain pairs.


Add or remove domain pairs

The links below permit the addition or removal of specific sets of domain combination pairs.


Jump to [ Top of page · Add/remove domain pairs · Domain combination pairs ]

Add or remove genomes

Change the list of genome two-letter codes in the 'Include genomes' box to include domain-pairs from those genomes.
Change the list of genomes in the 'Exclude genomes' box to exclude domain-pairs from those genomes.
List of all two-letter genome codes.

Add or remove genomes:
Include genomes:
Exclude genomes:


Jump to [ Top of page · Add/remove domain pairs · Add/remove genomes ]

Domain combination pairs

663 domain combination pairs.
Click on a column heading to sort that column, or the 'View' button to see domain architetures for that domain pair combination.

Superfamily (N) Superfamily (C) Number of occurrances Number unique
Homodimeric domain of signal transducing histidine kinase ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 5333
PYP-like sensor domain (PAS domain) ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 3526
PYP-like sensor domain (PAS domain) Homodimeric domain of signal transducing histidine kinase 3122
P-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases 2111
PYP-like sensor domain (PAS domain) PYP-like sensor domain (PAS domain) 2019
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase CheY-like 2017
P-loop containing nucleoside triphosphate hydrolases Homeodomain-like 197
CheY-like PYP-like sensor domain (PAS domain) 1815
Homodimeric domain of signal transducing histidine kinase CheY-like 1815
CheY-like P-loop containing nucleoside triphosphate hydrolases 133
PYP-like sensor domain (PAS domain) Nucleotide cyclase 1111
CheY-like Homeodomain-like 112
Multidrug resistance efflux transporter EmrE Multidrug resistance efflux transporter EmrE 112
Homeodomain-like Tetracyclin repressor-like, C-terminal domain 111
Methyl-accepting chemotaxis protein (MCP) signaling domain Sensory domain-like 105
Multidrug efflux transporter AcrB transmembrane domain Multidrug efflux transporter AcrB transmembrane domain 105
NAD(P)-binding Rossmann-fold domains Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 103
Thiamin diphosphate-binding fold (THDP-binding) TK C-terminal domain-like 105
TPR-like TPR-like 96
Sensory domain-like PYP-like sensor domain (PAS domain) 97
Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) 95
Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains Multidrug efflux transporter AcrB transmembrane domain 83
Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains 83
Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains 83
HAMP domain-like Homodimeric domain of signal transducing histidine kinase 86
P-loop containing nucleoside triphosphate hydrolases Translation proteins 86
HAMP domain-like ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 86
Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains 83
Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains Multidrug efflux transporter AcrB transmembrane domain 83
Formate dehydrogenase/DMSO reductase, domains 1-3 ADC-like 72
P-loop containing nucleoside triphosphate hydrolases Ribosomal protein S5 domain 2-like 74
PYP-like sensor domain (PAS domain) Methyl-accepting chemotaxis protein (MCP) signaling domain 74
Nucleotidylyl transferase Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 77
Sigma2 domain of RNA polymerase sigma factors Sigma3 and sigma4 domains of RNA polymerase sigma factors 73
ABC transporter transmembrane region P-loop containing nucleoside triphosphate hydrolases 73
PreATP-grasp domain Glutathione synthetase ATP-binding domain-like 64
Homeodomain-like Homeodomain-like 63
P-loop containing nucleoside triphosphate hydrolases EF-G C-terminal domain-like 64
Actin-like ATPase domain Actin-like ATPase domain 62
NAD(P)-binding Rossmann-fold domains 6-phosphogluconate dehydrogenase C-terminal domain-like 62
Metallo-dependent hydrolases Composite domain of metallo-dependent hydrolases 62
CheY-like C-terminal effector domain of the bipartite response regulators 51
MurD-like peptide ligases, catalytic domain MurD-like peptide ligases, peptide-binding domain 53
EF-G C-terminal domain-like EF-G C-terminal domain-like 53
Nucleotide cyclase EAL domain-like 55
"Winged helix" DNA-binding domain Periplasmic binding protein-like II 51
Formate/glycerate dehydrogenase catalytic domain-like NAD(P)-binding Rossmann-fold domains 52
Translation proteins EF-G C-terminal domain-like 53
ACT-like ACT-like 53
Glutathione synthetase ATP-binding domain-like Phosphohistidine domain 52
HAMP domain-like PYP-like sensor domain (PAS domain) 55
PurM N-terminal domain-like PurM C-terminal domain-like 52
PYP-like sensor domain (PAS domain) P-loop containing nucleoside triphosphate hydrolases 53
NAD(P)-binding Rossmann-fold domains TrkA C-terminal domain-like 44
Nucleic acid-binding proteins Class II aaRS and biotin synthetases 43
PreATP-grasp domain Rudiment single hybrid motif 42
Succinyl-CoA synthetase domains Succinyl-CoA synthetase domains 43
PYP-like sensor domain (PAS domain) Homeodomain-like 42
N-terminal nucleophile aminohydrolases (Ntn hydrolases) Adenine nucleotide alpha hydrolases-like 41
NAD(P)-binding Rossmann-fold domains Glutathione synthetase ATP-binding domain-like 43
CheY-like Nucleotide cyclase 43
CheW-like CheY-like 42
P-loop containing nucleoside triphosphate hydrolases Class I glutamine amidotransferase-like 42
cAMP-binding domain-like "Winged helix" DNA-binding domain 41
FAD/NAD(P)-binding domain 4Fe-4S ferredoxins 44
PLP-binding barrel Alanine racemase C-terminal domain-like 43
Nucleic acid-binding proteins Nucleic acid-binding proteins 44
NAD(P)-binding Rossmann-fold domains Succinyl-CoA synthetase domains 43
Adenine nucleotide alpha hydrolases-like Adenine nucleotide alpha hydrolases-like 41
Glutathione synthetase ATP-binding domain-like Rudiment single hybrid motif 42
Alpha-L RNA-binding motif Pseudouridine synthase 42
GAF domain-like ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 44
Aminoacid dehydrogenase-like, N-terminal domain NAD(P)-binding Rossmann-fold domains 42
Sensory domain-like ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 44
Sensory domain-like Homodimeric domain of signal transducing histidine kinase 44
PYP-like sensor domain (PAS domain) EAL domain-like 44
Succinyl-CoA synthetase domains Glutathione synthetase ATP-binding domain-like 43
Pyruvate-ferredoxin oxidoreductase, PFOR, domain III Thiamin diphosphate-binding fold (THDP-binding) 33
Nucleotidyltransferase Poly A polymerase C-terminal region-like 33
FAD/NAD(P)-binding domain Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain 32
Regulatory protein AraC Homeodomain-like 31
Periplasmic binding protein-like II ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 33
NAD(P)-binding Rossmann-fold domains NAD(P)-binding Rossmann-fold domains 33
Histidine-containing phosphotransfer domain, HPT domain Homodimeric domain of signal transducing histidine kinase 33
"Winged helix" DNA-binding domain PLP-dependent transferases 31
Thiamin diphosphate-binding fold (THDP-binding) DHS-like NAD/FAD-binding domain 31
Nitrite/Sulfite reductase N-terminal domain-like Nitrite and sulphite reductase 4Fe-4S domain-like 32
EF-G C-terminal domain-like Ribosomal protein S5 domain 2-like 31
Rhodanese/Cell cycle control phosphatase Rhodanese/Cell cycle control phosphatase 33
Nucleic acid-binding proteins RuvA domain 2-like 33
FAD/NAD(P)-binding domain Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain 32
Sigma3 and sigma4 domains of RNA polymerase sigma factors Sigma3 and sigma4 domains of RNA polymerase sigma factors 32
ValRS/IleRS/LeuRS editing domain Nucleotidylyl transferase 33
Homodimeric domain of signal transducing histidine kinase CheW-like 33
Periplasmic binding protein-like II PYP-like sensor domain (PAS domain) 33
Periplasmic binding protein-like II Homodimeric domain of signal transducing histidine kinase 33
Aldehyde ferredoxin oxidoreductase, N-terminal domain Aldehyde ferredoxin oxidoreductase, C-terminal domains 31
FAD/NAD(P)-binding domain FAD/NAD-linked reductases, dimerisation (C-terminal) domain 32
EAL domain-like HD-domain/PDEase-like 31
Phosphoglucomutase, first 3 domains Phosphoglucomutase, C-terminal domain 32
Mechanosensitive channel protein MscS (YggB), transmembrane region Sm-like ribonucleoproteins 32
Sensory domain-like Nucleotide cyclase 33
Phosphoglucomutase, first 3 domains Phosphoglucomutase, first 3 domains 32
P-loop containing nucleoside triphosphate hydrolases MOP-like 31
CheY-like TPR-like 32
Translation proteins Ribosomal protein S5 domain 2-like 31
Pyruvate-ferredoxin oxidoreductase, PFOR, domain III TK C-terminal domain-like 33
Histidine-containing phosphotransfer domain, HPT domain ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 33
CheY-like CheY-like 33
PYP-like sensor domain (PAS domain) GAF domain-like 33
Triger factor/SurA peptide-binding domain-like FKBP-like 33
HAMP domain-like PP2C-like 32
Sensory domain-like HAMP domain-like 33
Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like 32
Thiamin diphosphate-binding fold (THDP-binding) 4Fe-4S ferredoxins 33
ValRS/IleRS/LeuRS editing domain Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 33
Mechanosensitive channel protein MscS (YggB), transmembrane region Mechanosensitive channel protein MscS (YggB), C-terminal domain 32
Sensory domain-like CheY-like 33
beta-Roll beta-Roll 33
P-loop containing nucleoside triphosphate hydrolases "Winged helix" DNA-binding domain 33
Chemotaxis receptor methyltransferase CheR, N-terminal domain S-adenosyl-L-methionine-dependent methyltransferases 31
Sm-like ribonucleoproteins Mechanosensitive channel protein MscS (YggB), C-terminal domain 32
Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain 32
HAMP domain-like CheY-like 33
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase Ribosomal protein S5 domain 2-like 33
CheY-like HD-domain/PDEase-like 33
MoeA N-terminal region -like Molybdenum cofactor biosynthesis proteins 33
Class II aaRS and biotin synthetases Class II aaRS ABD-related 33
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase CheW-like 33
FAD-binding/transporter-associated domain-like FAD-linked oxidases, C-terminal domain 32
4Fe-4S ferredoxins FMN-linked oxidoreductases 21
CheY-like SpoIIaa-like 21
MurCD N-terminal domain MurD-like peptide ligases, peptide-binding domain 21
tRNA-binding arm Class II aaRS and biotin synthetases 21
GAF domain-like Homodimeric domain of signal transducing histidine kinase 22
PUA domain-like P-loop containing nucleoside triphosphate hydrolases 21
GAF domain-like P-loop containing nucleoside triphosphate hydrolases 21
Zn-dependent exopeptidases Bacterial exopeptidase dimerisation domain 21
Phosphohistidine domain Phosphoenolpyruvate/pyruvate domain 22
DNA repair protein MutS, domain III P-loop containing nucleoside triphosphate hydrolases 22
CheY-like Histidine-containing phosphotransfer domain, HPT domain 22
Trypsin-like serine proteases PDZ domain-like 22
P-loop containing nucleoside triphosphate hydrolases EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 22
N-terminal domain of alpha and beta subunits of F1 ATP synthase C-terminal domain of alpha and beta subunits of F1 ATP synthase 21
Double Clp-N motif P-loop containing nucleoside triphosphate hydrolases 21
Penicillin binding protein dimerisation domain beta-lactamase/transpeptidase-like 22
P-loop containing nucleoside triphosphate hydrolases HprK N-terminal domain-like 22
FAD/NAD(P)-binding domain FAD/NAD(P)-binding domain 22
GroEL equatorial domain-like GroEL apical domain-like 21
TPR-like Radical SAM enzymes 22
Glutamine synthetase, N-terminal domain Glutamine synthetase/guanido kinase 21
4Fe-4S ferredoxins Nucleotide-binding domain 22
Phosphoenolpyruvate/pyruvate domain PK C-terminal domain-like 21
Histidine-containing phosphotransfer domain, HPT domain CheW-like 22
Sensory domain-like PP2C-like 22
"Winged helix" DNA-binding domain Dimeric alpha+beta barrel 21
Class II aaRS and biotin synthetases ThrRS/AlaRS common domain 22
HAMP domain-like EAL domain-like 22
4Fe-4S ferredoxins P-loop containing nucleoside triphosphate hydrolases 21
N-terminal domain of alpha and beta subunits of F1 ATP synthase P-loop containing nucleoside triphosphate hydrolases 21
Chaperone J-domain HSP40/DnaJ peptide-binding domain 22
Translation proteins EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 22
HAMP domain-like Nucleotide cyclase 22
LuxS/MPP-like metallohydrolase LuxS/MPP-like metallohydrolase 21
Ferritin-like Rubredoxin-like 21
Translation proteins SH3-like domain Nucleic acid-binding proteins 22
Pyruvate-ferredoxin oxidoreductase, PFOR, domain III 4Fe-4S ferredoxins 22
6-phosphogluconate dehydrogenase C-terminal domain-like UDP-glucose/GDP-mannose dehydrogenase C-terminal domain 21
DnaK suppressor protein DksA, alpha-hairpin domain Glucocorticoid receptor-like (DNA-binding domain) 21
Galactose-binding domain-like ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 22
4Fe-4S ferredoxins Nitrite and sulphite reductase 4Fe-4S domain-like 21
HD-domain/PDEase-like ACT-like 22
Nucleotide-binding domain Nucleotide-binding domain 22
Cobalamin (vitamin B12)-binding domain Radical SAM enzymes 22
Aldolase 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain 21
CheY-like Methylesterase CheB, C-terminal domain 21
PK beta-barrel domain-like Phosphoenolpyruvate/pyruvate domain 21
Zinc beta-ribbon DNA primase core 22
HD-domain/PDEase-like HD-domain/PDEase-like 21
NAD(P)-binding Rossmann-fold domains ACT-like 22
Nucleotidyltransferase HD-domain/PDEase-like 22
P-loop containing nucleoside triphosphate hydrolases TrpR-like 21
MurE/MurF N-terminal domain MurD-like peptide ligases, catalytic domain 21
NAD(P)-binding Rossmann-fold domains UDP-glucose/GDP-mannose dehydrogenase C-terminal domain 21
Metallo-hydrolase/oxidoreductase Flavoproteins 21
Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain 22
TK C-terminal domain-like 4Fe-4S ferredoxins 22
Calcium ATPase, transduction domain A HAD-like 22
Voltage-gated potassium channels TrkA C-terminal domain-like 22
ClpP/crotonase ClpP/crotonase 21
Nucleotide-diphospho-sugar transferases TPR-like 22
MurE/MurF N-terminal domain MurD-like peptide ligases, peptide-binding domain 21
Nitrite/Sulfite reductase N-terminal domain-like 4Fe-4S ferredoxins 21
MurCD N-terminal domain MurD-like peptide ligases, catalytic domain 21
Radical SAM enzymes Nitrogenase accessory factor-like 21
MoeA N-terminal region -like MoeA C-terminal domain-like 22
Sensory domain-like EAL domain-like 22
HlyD-like secretion proteins HlyD-like secretion proteins 22
Creatinase/prolidase N-terminal domain Creatinase/aminopeptidase 21
Sensory domain-like Sensory domain-like 22
PK beta-barrel domain-like PK C-terminal domain-like 21
P-loop containing nucleoside triphosphate hydrolases C-terminal domain of alpha and beta subunits of F1 ATP synthase 21
Molybdenum cofactor biosynthesis proteins MoeA C-terminal domain-like 22
PDZ domain-like PDZ domain-like 22
P-loop containing nucleoside triphosphate hydrolases post-AAA+ oligomerization domain-like 22
GroEL equatorial domain-like GroEL-intermediate domain like 21
Lysozyme-like beta-lactamase/transpeptidase-like 22
P-loop containing nucleoside triphosphate hydrolases TGS-like 21
Ribosomal protein S5 domain 2-like GHMP Kinase, C-terminal domain 21
"Winged helix" DNA-binding domain S-adenosyl-L-methionine-dependent methyltransferases 21
TrkA C-terminal domain-like TrkA C-terminal domain-like 22
HSP40/DnaJ peptide-binding domain HSP40/DnaJ peptide-binding domain 22
Nucleotidyltransferase ACT-like 22
MOP-like MOP-like 21
Calcium ATPase, transduction domain A Calcium ATPase, transmembrane domain M 22
Voltage-gated potassium channels NAD(P)-binding Rossmann-fold domains 22
PUA domain-like Ribosomal protein S5 domain 2-like 21
GAF domain-like Homeodomain-like 21
4Fe-4S ferredoxins FMN-dependent nitroreductase-like 21
DNA breaking-rejoining enzymes MOP-like 21
4Fe-4S ferredoxins Fe-only hydrogenase 21
GroEL-intermediate domain like GroEL apical domain-like 21
lambda repressor-like DNA-binding domains RmlC-like cupins 21
Aldolase AFP III-like domain 21
HAD-like Calcium ATPase, transmembrane domain M 22
GAF domain-like HD-domain/PDEase-like 22
Ribokinase-like AraD/HMP-PK domain-like 11
Ribosomal L11/L12e N-terminal domain Ribosomal protein L11, C-terminal domain 11
Eukaryotic type KH-domain (KH-domain type I) Nucleic acid-binding proteins 11
Nicotinate/Quinolinate PRTase N-terminal domain-like Nicotinate/Quinolinate PRTase C-terminal domain-like 11
CarD-like TRCF domain-like 11
Prokaryotic type KH domain (KH-domain type II) Prokaryotic type KH domain (KH-domain type II) 11
PIN domain-like P-loop containing nucleoside triphosphate hydrolases 11
PLP-dependent transferases P-loop containing nucleoside triphosphate hydrolases 11
alpha-helical ferredoxin Respiratory nitrate reductase 1 gamma chain 11
Ribosomal protein L6 Ribosomal protein L6 11
RuvA domain 2-like P-loop containing nucleoside triphosphate hydrolases 11
Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) ThrRS/AlaRS common domain 11
lambda integrase-like, N-terminal domain DNA breaking-rejoining enzymes 11
Alpha-L RNA-binding motif S-adenosyl-L-methionine-dependent methyltransferases 11
ParB/Sulfiredoxin KorB DNA-binding domain-like 11
Formate dehydrogenase/DMSO reductase, domains 1-3 Class I glutamine amidotransferase-like 11
HMA, heavy metal-associated domain HMA, heavy metal-associated domain 11
P-loop containing nucleoside triphosphate hydrolases TRCF domain-like 11
UbiD C-terminal domain-like UbiD C-terminal domain-like 11
NAD(P)-binding Rossmann-fold domains P-loop containing nucleoside triphosphate hydrolases 11
PurM N-terminal domain-like PurM N-terminal domain-like 11
SpoIIaa-like cAMP-binding domain-like 11
Nucleotidylyl transferase Riboflavin kinase-like 11
Class II aaRS and biotin synthetases Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) 11
Metallo-hydrolase/oxidoreductase SCP-like 11
Ribosomal protein S5 domain 2-like Type II DNA topoisomerase 11
Ribbon-helix-helix ACT-like 11
4Fe-4S ferredoxins CheY-like 11
Poly A polymerase C-terminal region-like ACT-like 11
Alpha subunit of glutamate synthase, C-terminal domain 4Fe-4S ferredoxins 11
Homeodomain-like Probable bacterial effector-binding domain 11
Tex N-terminal region-like Nucleic acid-binding proteins 11
Rho N-terminal domain-like P-loop containing nucleoside triphosphate hydrolases 11
Aldolase Single hybrid motif 11
2Fe-2S ferredoxin-like alpha-helical ferredoxin 11
dsRNA-binding domain-like Ribosomal protein S5 domain 2-like 11
Ankyrin repeat Ankyrin repeat 11
PYP-like sensor domain (PAS domain) HlyD-like secretion proteins 11
EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain "Winged helix" DNA-binding domain 11
CBS-domain pair Nucleotide cyclase 11
HAD-like Galactose mutarotase-like 11
Rho N-terminal domain-like Nucleic acid-binding proteins 11
RNase III domain-like dsRNA-binding domain-like 11
Elongation factor Ts (EF-Ts), dimerisation domain Elongation factor Ts (EF-Ts), dimerisation domain 11
Folate-binding domain P-loop containing nucleoside triphosphate hydrolases 11
Homo-oligomeric flavin-containing Cys decarboxylases, HFCD CoaB-like 11
Nucleic acid-binding proteins GAD domain-like 11
Cytochrome c Multiheme cytochromes 11
CBS-domain pair Nucleotidyltransferase 11
NTF2-like NTF2-like 11
Glutathione synthetase ATP-binding domain-like Phosphoenolpyruvate/pyruvate domain 11
GIY-YIG endonuclease RuvA domain 2-like 11
Glutathione synthetase ATP-binding domain-like Single hybrid motif 11
PA domain Zn-dependent exopeptidases 11
ThrRS/AlaRS common domain Class II aaRS ABD-related 11
Class I glutamine amidotransferase-like Adenine nucleotide alpha hydrolases-like 11
TrmE connector domain P-loop containing nucleoside triphosphate hydrolases 11
Pre-protein crosslinking domain of SecA Helical scaffold and wing domains of SecA 11
Carbon-nitrogen hydrolase Adenine nucleotide alpha hydrolases-like 11
Cation efflux protein transmembrane domain-like Cation efflux protein cytoplasmic domain-like 11
Multiheme cytochromes Multiheme cytochromes 11
Nucleotidyltransferase Nucleotidyltransferase substrate binding subunit/domain 11
Ribosomal protein S5 domain 2-like HSP90 C-terminal domain 11
Trigger factor ribosome-binding domain Triger factor/SurA peptide-binding domain-like 11
Translation initiation factor IF3, N-terminal domain Translation initiation factor IF3, C-terminal domain 11
Class II aaRS and biotin synthetases YbaK/ProRS associated domain 11
lambda repressor-like DNA-binding domains LexA/Signal peptidase 11
Periplasmic binding protein-like II CheY-like 11
FAD-linked oxidoreductase ALDH-like 11
FAD/NAD(P)-binding domain HI0933 insert domain-like 11
Galactose mutarotase-like Six-hairpin glycosidases 11
Nucleotide-diphospho-sugar transferases IpsF-like 11
Prokaryotic type KH domain (KH-domain type II) Ribosomal protein S3 C-terminal domain 11
Carbamate kinase-like PUA domain-like 11
Nucleic acid-binding proteins BRCT domain 11
SufE/NifU Fe-S cluster assembly (FSCA) domain-like 11
Aldolase post-HMGL domain-like 11
Metal cation-transporting ATPase, ATP-binding domain N HAD-like 11
CbiG N-terminal domain-like CobE/GbiG C-terminal domain-like 11
ARM repeat CheY-like 11
Methyl-accepting chemotaxis protein (MCP) signaling domain Hemerythrin-like 11
Glutathione synthetase ATP-binding domain-like post-HMGL domain-like 11
Insert subdomain of RNA polymerase alpha subunit C-terminal domain of RNA polymerase alpha subunit 11
NAD(P)-binding Rossmann-fold domains 1-deoxy-D-xylulose-5-phosphate reductoisomerase, C-terminal domain 11
PYP-like sensor domain (PAS domain) Histidine-containing phosphotransfer domain, HPT domain 11
Molybdenum cofactor biosynthesis proteins Periplasmic binding protein-like II 11
Tex N-terminal region-like RuvA domain 2-like 11
Homocysteine S-methyltransferase Methionine synthase domain 11
ACT-like 4Fe-4S ferredoxins 11
FAD-binding/transporter-associated domain-like Uridine diphospho-N-Acetylenolpyruvylglucosamine reductase, MurB, C-terminal domain 11
Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) Translation proteins 11
Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 1-deoxy-D-xylulose-5-phosphate reductoisomerase, C-terminal domain 11
Glutathione synthetase ATP-binding domain-like Methylglyoxal synthase-like 11
PreATP-grasp domain PreATP-grasp domain 11
CBS-domain pair FAD-binding/transporter-associated domain-like 11
Eukaryotic type KH-domain (KH-domain type I) HD-domain/PDEase-like 11
Coiled-coil domain of nucleotide exchange factor GrpE Head domain of nucleotide exchange factor GrpE 11
Thioesterase/thiol ester dehydrase-isomerase Thioesterase/thiol ester dehydrase-isomerase 11
Transcription factor NusA, N-terminal domain Nucleic acid-binding proteins 11
Methionine synthase domain Cobalamin (vitamin B12)-binding domain 11
N-terminal domain of MutM-like DNA repair proteins Glucocorticoid receptor-like (DNA-binding domain) 11
UDP-Glycosyltransferase/glycogen phosphorylase UDP-Glycosyltransferase/glycogen phosphorylase 11
GIY-YIG endonuclease C-terminal UvrC-binding domain of UvrB 11
FMN-dependent nitroreductase-like FMN-dependent nitroreductase-like 11
Ribonuclease PH domain 2-like Nucleic acid-binding proteins 11
FAD-binding/transporter-associated domain-like alpha-helical ferredoxin 11
Poly A polymerase C-terminal region-like HD-domain/PDEase-like 11
Acyl-CoA dehydrogenase NM domain-like Acyl-CoA dehydrogenase C-terminal domain-like 11
post-HMGL domain-like Single hybrid motif 11
Histidine-containing phosphotransfer domain, HPT domain SpoIIaa-like 11
Aconitase iron-sulfur domain LeuD/IlvD-like 11
Cytidine deaminase-like Dihydrofolate reductase-like 11
Insert subdomain of RNA polymerase alpha subunit RBP11-like subunits of RNA polymerase 11
Nucleotide cyclase Hemerythrin-like 11
PHP domain-like P-loop containing nucleoside triphosphate hydrolases 11
PYP-like sensor domain (PAS domain) HD-domain/PDEase-like 11
Ribonuclease H-like Nucleic acid-binding proteins 11
Ribonuclease PH domain 2-like Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 11
4Fe-4S ferredoxins alpha-helical ferredoxin 11
Rubredoxin-like Superoxide reductase-like 11
Transcription factor NusA, N-terminal domain Prokaryotic type KH domain (KH-domain type II) 11
"Winged helix" DNA-binding domain NAD(P)-binding Rossmann-fold domains 11
PUA domain-like Nucleotidylyl transferase 11
Class I glutamine amidotransferase-like GMP synthetase C-terminal dimerisation domain 11
Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain Pyrimidine nucleoside phosphorylase C-terminal domain 11
Nucleic acid-binding proteins PheT/TilS domain 11
Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain Nucleotidylyl transferase 11
Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases Nucleic acid-binding proteins 11
Metallo-dependent hydrolases Acyl-CoA N-acyltransferases (Nat) 11
Nucleotide cyclase TPR-like 11
Periplasmic binding protein-like II Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain 11
FAD-binding/transporter-associated domain-like CO dehydrogenase flavoprotein C-terminal domain-like 11
FAD-linked reductases, C-terminal domain 4Fe-4S ferredoxins 11
Nucleotidylyl transferase Ribokinase-like 11
MgtE N-terminal domain-like MgtE membrane domain-like 11
Subtilisin-like Galactose-binding domain-like 11
NusB-like S-adenosyl-L-methionine-dependent methyltransferases 11
Flavoproteins 4Fe-4S ferredoxins 11
Rhodanese/Cell cycle control phosphatase Ferritin-like 11
DNA repair protein MutS, domain II DNA repair protein MutS, domain III 11
HMA, heavy metal-associated domain Calcium ATPase, transduction domain A 11
Translation proteins PRC-barrel domain 11
Domain of the SRP/SRP receptor G-proteins P-loop containing nucleoside triphosphate hydrolases 11
CheY-like Nucleotide-binding domain 11
lambda repressor-like DNA-binding domains P-loop containing nucleoside triphosphate hydrolases 11
Rudiment single hybrid motif Aldolase 11
FMN-linked oxidoreductases Nitrite and sulphite reductase 4Fe-4S domain-like 11
Nucleotide-diphospho-sugar transferases RmlC-like cupins 11
GroES-like NAD(P)-binding Rossmann-fold domains 11
Tryptophan synthase beta subunit-like PLP-dependent enzymes Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 11
Periplasmic binding protein-like II GlnB-like 11
PreATP-grasp domain Methylglyoxal synthase-like 11
Periplasmic binding protein-like II ACT-like 11
Translation proteins Initiation factor IF2/eIF5b, domain 3 11
Actin-like ATPase domain Heat shock protein 70kD (HSP70), peptide-binding domain 11
Dihydropteroate synthetase-like Cobalamin (vitamin B12)-binding domain 11
Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 11
P-loop containing nucleoside triphosphate hydrolases Initiation factor IF2/eIF5b, domain 3 11
RuvA domain 2-like BRCT domain 11
FAD/NAD-linked reductases, dimerisation (C-terminal) domain Rhodanese/Cell cycle control phosphatase 11
Ribosomal protein S5 domain 2-like Ribonuclease PH domain 2-like 11
2Fe-2S ferredoxin-like CO dehydrogenase ISP C-domain like 11
Translation proteins "Winged helix" DNA-binding domain 11
PYP-like sensor domain (PAS domain) Ligand-binding domain in the NO signalling and Golgi transport 11
P-loop containing nucleoside triphosphate hydrolases Ribonuclease H-like 11
CheY-like GAF domain-like 11
"Winged helix" DNA-binding domain GntR ligand-binding domain-like 11
Tubulin nucleotide-binding domain-like Tubulin C-terminal domain-like 11
Nucleotidylyl transferase An anticodon-binding domain of class I aminoacyl-tRNA synthetases 11
all-alpha NTP pyrophosphatases all-alpha NTP pyrophosphatases 11
ACT-like Formyltransferase 11
P-loop containing nucleoside triphosphate hydrolases RecA protein, C-terminal domain 11
PreATP-grasp domain Aldolase 11
C-terminal UvrC-binding domain of UvrB RuvA domain 2-like 11
Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase HAD-like 11
PIN domain-like 5' to 3' exonuclease, C-terminal subdomain 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) SIS domain 11
PHP domain-like UDP-Glycosyltransferase/glycogen phosphorylase 11
PUA domain-like alpha/beta knot 11
Alpha subunit of glutamate synthase, C-terminal domain FAD/NAD(P)-binding domain 11
FAD/NAD(P)-binding domain Rhodanese/Cell cycle control phosphatase 11
S-adenosylmethionine synthetase S-adenosylmethionine synthetase 11
ClpP/crotonase NfeD domain-like 11
PheT/TilS domain Class II aaRS and biotin synthetases 11
RuvA domain 2-like RuvA domain 2-like 11
Galactose-binding domain-like PYP-like sensor domain (PAS domain) 11
EreA/ChaN-like PDZ domain-like 11
P-loop containing nucleoside triphosphate hydrolases CarD-like 11
L,D-transpeptidase catalytic domain-like NTF2-like 11
Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain Pyrimidine nucleoside phosphorylase C-terminal domain 11
Chorismate mutase II Periplasmic binding protein-like II 11
Glutathione synthetase ATP-binding domain-like Glutathione synthetase ATP-binding domain-like 11
Rhodanese/Cell cycle control phosphatase YceI-like 11
EAL domain-like CBS-domain pair 11
Aminopeptidase/glucanase lid domain Zn-dependent exopeptidases 11
Nqo1 FMN-binding domain-like alpha-helical ferredoxin 11
EspE N-terminal domain-like Homodimeric domain of signal transducing histidine kinase 11
TPR-like OmpA-like 11
SirA-like DsrEFH-like 11
CorA soluble domain-like Magnesium transport protein CorA, transmembrane region 11
Adenine nucleotide alpha hydrolases-like DHS-like NAD/FAD-binding domain 11
Enolase N-terminal domain-like Enolase C-terminal domain-like 11
NagB/RpiA/CoA transferase-like 4Fe-4S ferredoxins 11
Concanavalin A-like lectins/glucanases Concanavalin A-like lectins/glucanases 11
P-loop containing nucleoside triphosphate hydrolases CBS-domain pair 11
Restriction endonuclease-like P-loop containing nucleoside triphosphate hydrolases 11
Nucleotide-diphospho-sugar transferases Radical SAM enzymes 11
Cadherin-like beta-Roll 11
Ribonuclease H-like RuvA domain 2-like 11
Histidine-containing phosphotransfer domain, HPT domain Histidine-containing phosphotransfer domain, HPT domain 11
Prokaryotic type I DNA topoisomerase Zinc beta-ribbon 11
Nucleotidylyl transferase Nucleic acid-binding proteins 11
Galactose-binding domain-like beta-Roll 11
Class II aaRS and biotin synthetases GAD domain-like 11
Formate/glycerate dehydrogenase catalytic domain-like ACT-like 11
Ribosomal protein S5 domain 2-like DNA mismatch repair protein MutL 11
ARM repeat ARM repeat 11
DNA ligase/mRNA capping enzyme, catalytic domain BRCT domain 11
Glutathione synthetase ATP-binding domain-like Aldolase 11
FAD-linked oxidases, C-terminal domain alpha-helical ferredoxin 11
Chorismate mutase II EPT/RTPC-like 11
Calcium ATPase, transduction domain A Metal cation-transporting ATPase, ATP-binding domain N 11
Restriction endonuclease-like "Winged helix" DNA-binding domain 11
Metallo-hydrolase/oxidoreductase Rhodanese/Cell cycle control phosphatase 11
Clc chloride channel CBS-domain pair 11
Phage tail proteins Phage tail proteins 11
Ribosomal protein L7/12, oligomerisation (N-terminal) domain ClpS-like 11
MoeA C-terminal domain-like Periplasmic binding protein-like II 11
GAF domain-like Rhodanese/Cell cycle control phosphatase 11
GAF domain-like Nucleotide cyclase 11
Integrin alpha N-terminal domain beta-Roll 11
Tex N-terminal region-like Ribonuclease H-like 11
Nucleic acid-binding proteins Prokaryotic type KH domain (KH-domain type II) 11
Peptide methionine sulfoxide reductase Mss4-like 11
Radical SAM enzymes "Winged helix" DNA-binding domain 11
Nucleotidyltransferase substrate binding subunit/domain ACT-like 11
PhoU-like Protein kinase-like (PK-like) 11
Galactose-binding domain-like Homodimeric domain of signal transducing histidine kinase 11
CBS-domain pair Nucleotide-diphospho-sugar transferases 11
Carbamoyl phosphate synthetase, small subunit N-terminal domain Class I glutamine amidotransferase-like 11
NTF2-like Sec-C motif 11
Metallo-dependent phosphatases UDP-Glycosyltransferase/glycogen phosphorylase 11
EspE N-terminal domain-like CheW-like 11
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase HSP90 C-terminal domain 11
CBS-domain pair Poly A polymerase C-terminal region-like 11
Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain Phosphoenolpyruvate/pyruvate domain 11
Lysozyme-like LysM domain 11
Metal cation-transporting ATPase, ATP-binding domain N Calcium ATPase, transmembrane domain M 11
Nucleic acid-binding proteins Putative DNA-binding domain 11
Ribosomal protein S5 domain 2-like Eukaryotic type KH-domain (KH-domain type I) 11
Metallo-dependent phosphatases 5'-nucleotidase (syn. UDP-sugar hydrolase), C-terminal domain 11
PDZ domain-like ClpP/crotonase 11
Adenine nucleotide alpha hydrolases-like Argininosuccinate synthetase, C-terminal domain 11
PIN domain-like DNA/RNA polymerases 11
PYP-like sensor domain (PAS domain) PP2C-like 11
Riboflavin synthase domain-like Riboflavin synthase domain-like 11
Obg GTP-binding protein N-terminal domain P-loop containing nucleoside triphosphate hydrolases 11
Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 Eukaryotic type KH-domain (KH-domain type I) 11
Rudiment single hybrid motif Single hybrid motif 11
Glutamyl tRNA-reductase catalytic, N-terminal domain NAD(P)-binding Rossmann-fold domains 11
DNA clamp DNA clamp 11
Nucleic acid-binding proteins S-adenosyl-L-methionine-dependent methyltransferases 11
Nucleic acid-binding proteins Anticodon-binding domain of PheRS 11
Carbamoyl phosphate synthetase, large subunit connection domain Methylglyoxal synthase-like 11
S-adenosyl-L-methionine-dependent methyltransferases S-adenosyl-L-methionine-dependent methyltransferases 11
P-loop containing nucleoside triphosphate hydrolases Helical scaffold and wing domains of SecA 11
CBS-domain pair Inosine monophosphate dehydrogenase (IMPDH) 11
RuBisCO, large subunit, small (N-terminal) domain RuBisCo, C-terminal domain 11
PheT/TilS domain Putative DNA-binding domain 11
Thiolase-like Thiolase-like 11
YrdC/RibB RibA-like 11
MgtE N-terminal domain-like CBS-domain pair 11
DNA repair protein MutS, domain I DNA repair protein MutS, domain III 11
DHH phosphoesterases CBS-domain pair 11
HAD-like Six-hairpin glycosidases 11
CO dehydrogenase molybdoprotein N-domain-like Molybdenum cofactor-binding domain 11
4Fe-4S ferredoxins 4Fe-4S ferredoxins 11
5' to 3' exonuclease, C-terminal subdomain DNA/RNA polymerases 11
Histidine-containing phosphotransfer domain, HPT domain EspE N-terminal domain-like 11
Rudiment single hybrid motif post-HMGL domain-like 11
DNA ligase/mRNA capping enzyme, catalytic domain RuvA domain 2-like 11
N-utilization substance G protein NusG, N-terminal domain Translation proteins SH3-like domain 11
FAD/NAD(P)-binding domain FAD-linked reductases, C-terminal domain 11
Chorismate mutase II ACT-like 11
Tryptophan synthase beta subunit-like PLP-dependent enzymes Nucleotidylyl transferase 11
N-terminal domain of DnaB helicase P-loop containing nucleoside triphosphate hydrolases 11
Class II aaRS and biotin synthetases Anticodon-binding domain of PheRS 11
Phospholipase D/nuclease Phospholipase D/nuclease 11
P-loop containing nucleoside triphosphate hydrolases Prokaryotic type KH domain (KH-domain type II) 11
PrpR receptor domain-like P-loop containing nucleoside triphosphate hydrolases 11
Translation proteins Translation proteins 11
DNA/RNA polymerases Lesion bypass DNA polymerase (Y-family), little finger domain 11
TPR-like Sporulation related repeat 11
GAF domain-like GAF domain-like 11
FMN-binding split barrel UbiD C-terminal domain-like 11
PreATP-grasp domain Single hybrid motif 11
EspE N-terminal domain-like ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 11
Carbamate kinase-like ACT-like 11
PrpR receptor domain-like Homeodomain-like 11
Formyltransferase FMT C-terminal domain-like 11
Tetrapyrrole methylase HemD-like 11
UBA-like Elongation factor Ts (EF-Ts), dimerisation domain 11
Glycoside hydrolase/deacetylase UDP-Glycosyltransferase/glycogen phosphorylase 11
P-loop containing nucleoside triphosphate hydrolases S-adenosyl-L-methionine-dependent methyltransferases 11
Galactose-binding domain-like CheY-like 11
Dihydropteroate synthetase-like Methionine synthase domain 11
P-loop containing nucleoside triphosphate hydrolases Isocitrate/Isopropylmalate dehydrogenase-like 11
CBS-domain pair ACT-like 11
RBP11-like subunits of RNA polymerase C-terminal domain of RNA polymerase alpha subunit 11
Ribonuclease PH domain 2-like Eukaryotic type KH-domain (KH-domain type I) 11
Adenine nucleotide alpha hydrolases-like GMP synthetase C-terminal dimerisation domain 11
Nucleotide-diphospho-sugar transferases HD-domain/PDEase-like 11
Methyl-accepting chemotaxis protein (MCP) signaling domain Ligand-binding domain in the NO signalling and Golgi transport 11
PheT/TilS domain Anticodon-binding domain of PheRS 11
YjeF N-terminal domain-like Ribokinase-like 11
Penicillin binding protein dimerisation domain Penicillin-binding protein 2x (pbp-2x), c-terminal domain 11
N-terminal domain of MutM-like DNA repair proteins S13-like H2TH domain 11
Translation proteins ThrRS/AlaRS common domain 11
"Winged helix" DNA-binding domain "Winged helix" DNA-binding domain 11
Glutathione synthetase ATP-binding domain-like Acyl-CoA N-acyltransferases (Nat) 11
Subtilisin-like beta-Roll 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) PRTase-like 11
Nucleotidyltransferase TGS-like 11
Ribosomal protein S5 domain 2-like Nucleic acid-binding proteins 11
Rubredoxin-like Rubredoxin-like 11
Nucleotidyltransferase substrate binding subunit/domain HD-domain/PDEase-like 11
DNA repair protein MutS, domain I DNA repair protein MutS, domain II 11
DnaJ/Hsp40 cysteine-rich domain HSP40/DnaJ peptide-binding domain 11
Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain ACT-like 11
Nucleic acid-binding proteins Rad51 N-terminal domain-like 11
Folate-binding domain TrmE connector domain 11
Nucleotidylyl transferase tRNA-binding arm 11
YbaK/ProRS associated domain Class II aaRS ABD-related 11
beta-Roll Formin homology 2 domain (FH2 domain) 11
Ribosomal protein S5 domain 2-like Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 11
HMA, heavy metal-associated domain HAD-like 11
FabD/lysophospholipase-like Probable ACP-binding domain of malonyl-CoA ACP transacylase 11
L9 N-domain-like Ribosomal protein L9 C-domain 11
Restriction endonuclease-like S-adenosyl-L-methionine-dependent methyltransferases 11
Putative DNA-binding domain Anticodon-binding domain of PheRS 11
Acyl-CoA N-acyltransferases (Nat) Arginase/deacetylase 11
PreATP-grasp domain Carbamoyl phosphate synthetase, large subunit connection domain 11
PYP-like sensor domain (PAS domain) Hemerythrin-like 11
Class II aaRS and biotin synthetases Translation proteins 11
FwdE-like Molybdenum cofactor biosynthesis proteins 11
NAD(P)-binding Rossmann-fold domains Homeodomain-like 11
RuvA domain 2-like JAB1/MPN domain 11
Glutathione synthetase ATP-binding domain-like Carbamoyl phosphate synthetase, large subunit connection domain 11
Folate-binding domain Aminomethyltransferase beta-barrel domain 11
Pseudouridine synthase P-loop containing nucleoside triphosphate hydrolases 11
TPR-like Zn-dependent exopeptidases 11
PurM C-terminal domain-like PurM C-terminal domain-like 11
Glutamyl tRNA-reductase catalytic, N-terminal domain Glutamyl tRNA-reductase dimerization domain 11
MetI-like MetI-like 11
vWA-like OmpA-like 11
PreATP-grasp domain post-HMGL domain-like 11
HD-domain/PDEase-like TGS-like 11
TGS-like ACT-like 11
HprK N-terminal domain-like Isocitrate/Isopropylmalate dehydrogenase-like 11
Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 Nucleic acid-binding proteins 11
Nucleic acid-binding proteins P-loop containing nucleoside triphosphate hydrolases 11
Nucleotidylyl transferase Ribosomal protein L25-like 11
Nucleotide-diphospho-sugar transferases Trimeric LpxA-like enzymes 11
NagB/RpiA/CoA transferase-like NagB/RpiA/CoA transferase-like 11
DNA ligase/mRNA capping enzyme, catalytic domain Nucleic acid-binding proteins 11
DHH phosphoesterases Nucleotidyltransferase 11
Trigger factor ribosome-binding domain FKBP-like 11
IlvD/EDD N-terminal domain-like LeuD/IlvD-like 11
P-loop containing nucleoside triphosphate hydrolases FtsH protease domain-like 11
Riboflavin synthase domain-like Ferredoxin reductase-like, C-terminal NADP-linked domain 11
Fic-like "Winged helix" DNA-binding domain 11
Type II DNA topoisomerase GyrA/ParC C-terminal domain-like 11
Glutamine synthetase/guanido kinase GatB/YqeY motif 11
CheY-like EAL domain-like 11
ACT-like HAD-like 11
Putative DNA-binding domain Class II aaRS and biotin synthetases 11
Acyl-CoA N-acyltransferases (Nat) Acyl-CoA N-acyltransferases (Nat) 11
GreA transcript cleavage protein, N-terminal domain FKBP-like 11
S13-like H2TH domain Glucocorticoid receptor-like (DNA-binding domain) 11
DNA repair protein MutS, domain I P-loop containing nucleoside triphosphate hydrolases 11
YhbC-like, N-terminal domain YhbC-like, C-terminal domain 11
Bacterial fluorinating enzyme, N-terminal domain Bacterial fluorinating enzyme, C-terminal domain 11
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase DNA mismatch repair protein MutL 11
S-adenosyl-L-methionine-dependent methyltransferases Putative methyltransferase TM0872, insert domain 11
Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases tRNA-binding arm 11
Nucleotidyltransferase substrate binding subunit/domain Poly A polymerase C-terminal region-like 11
UROD/MetE-like UROD/MetE-like 11
Cadherin-like Cadherin-like 11
DNA-glycosylase Nudix 11
R1 subunit of ribonucleotide reductase, N-terminal domain PFL-like glycyl radical enzymes 11
NAD(P)-binding Rossmann-fold domains Glutamyl tRNA-reductase dimerization domain 11
P-loop containing nucleoside triphosphate hydrolases C-terminal UvrC-binding domain of UvrB 11
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase Type II DNA topoisomerase 11
2,3-Bisphosphoglycerate-independent phosphoglycerate mutase, substrate-binding domain Alkaline phosphatase-like 11
Homocysteine S-methyltransferase Dihydropteroate synthetase-like 11
CBS-domain pair MgtE membrane domain-like 11
P-loop containing nucleoside triphosphate hydrolases Signal peptide-binding domain 11
Barwin-like endoglucanases Sporulation related repeat 11
NAD(P)-binding Rossmann-fold domains Acyl-CoA N-acyltransferases (Nat) 11
DNA repair protein MutS, domain II P-loop containing nucleoside triphosphate hydrolases 11
Nucleic acid-binding proteins ArfGap/RecO-like zinc finger 11
gp5 N-terminal domain-like Phage fibre proteins 11
Ribonuclease PH domain 2-like Ribonuclease PH domain 2-like 11
Diaminopimelate epimerase-like Diaminopimelate epimerase-like 11
FliG FliG 11
ADC-like Class I glutamine amidotransferase-like 11
MoeA N-terminal region -like Periplasmic binding protein-like II 11
Transcription factor NusA, N-terminal domain Rad51 N-terminal domain-like 11
P-loop containing nucleoside triphosphate hydrolases HRDC-like 11
Nucleotidylyl transferase Alpha-L RNA-binding motif 11
Aspartate/glutamate racemase Aspartate/glutamate racemase 11
Alpha-L RNA-binding motif P-loop containing nucleoside triphosphate hydrolases 11
alpha-helical ferredoxin Nucleotide-binding domain 11
HMA, heavy metal-associated domain Calcium ATPase, transmembrane domain M 11
Acylphosphatase/BLUF domain-like YrdC/RibB 11
NAD(P)-binding Rossmann-fold domains Siroheme synthase middle domains-like 11
PLP-dependent transferases Class I glutamine amidotransferase-like 11
Chaperone J-domain DnaJ/Hsp40 cysteine-rich domain 11
Prokaryotic type KH domain (KH-domain type II) Rad51 N-terminal domain-like 11
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase Acyl-CoA N-acyltransferases (Nat) 11
Cryptochrome/photolyase, N-terminal domain Cryptochrome/photolyase FAD-binding domain 11
beta-lactamase/transpeptidase-like Penicillin-binding protein 2x (pbp-2x), c-terminal domain 11
Tetrapyrrole methylase S-adenosyl-L-methionine-dependent methyltransferases 11
Zinc beta-ribbon Zinc beta-ribbon 11
Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain Phosphohistidine domain 11
LysM domain LysM domain 11
P-loop containing nucleoside triphosphate hydrolases Pre-protein crosslinking domain of SecA 11
"Winged helix" DNA-binding domain Chorismate lyase-like 11
Glucocorticoid receptor-like (DNA-binding domain) P-loop containing nucleoside triphosphate hydrolases 11
Homocysteine S-methyltransferase Cobalamin (vitamin B12)-binding domain 11
DHH phosphoesterases Poly A polymerase C-terminal region-like 11
MFS general substrate transporter ApbE-like 11
Epsilon subunit of F1F0-ATP synthase N-terminal domain Epsilon subunit of F1F0-ATP synthase C-terminal domain 11
L30e-like alpha/beta knot 11
Succinyl-CoA synthetase domains Acyl-CoA N-acyltransferases (Nat) 11
ValRS/IleRS/LeuRS editing domain tRNA-binding arm 11
CheC-like Surface presentation of antigens (SPOA) 11

Jump to [ Top of page · Add/remove domain pairs · Add/remove genomes · Domain combination pairs ]