SUPERFAMILY 1.75 HMM library and genome assignments server

Domain combination pairs in Geobacter metallireducens GS-15

All pairs of domain combinations at the superfamily level are listed here.
The identification of domain pairs does not account for the possibility of non-contiguous domains. Inserted, or interlaced, domains are seen as having a simple pair ordering.

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Adjacent domain pairs graph

Graph of adjacent domain pairs.


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Domain combination pairs

760 domain combination pairs.
Click on a column heading to sort that column, or the 'View' button to see domain architetures for that domain pair combination.

Superfamily (N) Superfamily (C) Number of occurrances Number unique
Homodimeric domain of signal transducing histidine kinase ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 7739
PYP-like sensor domain (PAS domain) ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 3221
PYP-like sensor domain (PAS domain) Homodimeric domain of signal transducing histidine kinase 3019
P-loop containing nucleoside triphosphate hydrolases Homeodomain-like 286
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase CheY-like 2415
P-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases 2413
Homodimeric domain of signal transducing histidine kinase CheY-like 2213
HAMP domain-like ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 187
HAMP domain-like Homodimeric domain of signal transducing histidine kinase 187
CheY-like P-loop containing nucleoside triphosphate hydrolases 182
CheY-like Homeodomain-like 182
Multiheme cytochromes Multiheme cytochromes 1510
NAD(P)-binding Rossmann-fold domains 6-phosphogluconate dehydrogenase C-terminal domain-like 142
Actin-like ATPase domain Actin-like ATPase domain 144
GAF domain-like ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 1311
Thiolase-like Thiolase-like 132
Acyl-CoA dehydrogenase NM domain-like Acyl-CoA dehydrogenase C-terminal domain-like 122
PYP-like sensor domain (PAS domain) PYP-like sensor domain (PAS domain) 1111
GAF domain-like Homodimeric domain of signal transducing histidine kinase 1110
Multidrug efflux transporter AcrB transmembrane domain Multidrug efflux transporter AcrB transmembrane domain 105
CheY-like PYP-like sensor domain (PAS domain) 108
Thiamin diphosphate-binding fold (THDP-binding) TK C-terminal domain-like 105
PreATP-grasp domain Glutathione synthetase ATP-binding domain-like 107
NAD(P)-binding Rossmann-fold domains Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 105
P-loop containing nucleoside triphosphate hydrolases Translation proteins 107
HAMP domain-like PYP-like sensor domain (PAS domain) 95
Adenine nucleotide alpha hydrolases-like DHS-like NAD/FAD-binding domain 92
P-loop containing nucleoside triphosphate hydrolases Ribosomal protein S5 domain 2-like 86
Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) 87
Formate dehydrogenase/DMSO reductase, domains 1-3 ADC-like 84
NagB/RpiA/CoA transferase-like NagB/RpiA/CoA transferase-like 82
Respiratory nitrate reductase 1 gamma chain alpha-helical ferredoxin 81
Homeodomain-like Tetracyclin repressor-like, C-terminal domain 81
Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains Multidrug efflux transporter AcrB transmembrane domain 73
TPR-like TPR-like 75
Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains 73
Histidine-containing phosphotransfer domain, HPT domain ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 75
Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains 73
"Winged helix" DNA-binding domain GAF domain-like 71
Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains 73
Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains Multidrug efflux transporter AcrB transmembrane domain 73
Homeodomain-like Ribonuclease H-like 71
Chemotaxis receptor methyltransferase CheR, N-terminal domain S-adenosyl-L-methionine-dependent methyltransferases 72
Nucleotide cyclase EAL domain-like 64
FAD/NAD(P)-binding domain Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain 64
Triger factor/SurA peptide-binding domain-like FKBP-like 63
Sigma2 domain of RNA polymerase sigma factors Sigma3 and sigma4 domains of RNA polymerase sigma factors 63
PYP-like sensor domain (PAS domain) Nucleotide cyclase 64
Histidine-containing phosphotransfer domain, HPT domain Homodimeric domain of signal transducing histidine kinase 64
GAF domain-like GAF domain-like 65
EspE N-terminal domain-like P-loop containing nucleoside triphosphate hydrolases 64
P-loop containing nucleoside triphosphate hydrolases EF-G C-terminal domain-like 64
Cobalamin (vitamin B12)-binding domain Radical SAM enzymes 63
Nucleotidylyl transferase Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 65
CheY-like Nucleotide cyclase 64
2Fe-2S ferredoxin-like 4Fe-4S ferredoxins 53
Glutathione synthetase ATP-binding domain-like Rudiment single hybrid motif 54
Nucleic acid-binding proteins Nucleic acid-binding proteins 54
Translation proteins EF-G C-terminal domain-like 53
ACT-like ACT-like 53
Aminoacid dehydrogenase-like, N-terminal domain NAD(P)-binding Rossmann-fold domains 52
Formate/glycerate dehydrogenase catalytic domain-like NAD(P)-binding Rossmann-fold domains 52
PLP-binding barrel Alanine racemase C-terminal domain-like 52
PYP-like sensor domain (PAS domain) Homeodomain-like 52
GroES-like NAD(P)-binding Rossmann-fold domains 51
PurM N-terminal domain-like PurM C-terminal domain-like 52
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase CheW-like 53
FAD/NAD(P)-binding domain FAD/NAD-linked reductases, dimerisation (C-terminal) domain 53
Cytochrome c Cytochrome c 54
Histidine-containing phosphotransfer domain, HPT domain CheW-like 53
EF-G C-terminal domain-like EF-G C-terminal domain-like 53
Phospholipase D/nuclease Phospholipase D/nuclease 54
Cupredoxins Cupredoxins 55
PYP-like sensor domain (PAS domain) P-loop containing nucleoside triphosphate hydrolases 52
PYP-like sensor domain (PAS domain) EAL domain-like 53
ABC transporter transmembrane region P-loop containing nucleoside triphosphate hydrolases 51
MurD-like peptide ligases, catalytic domain MurD-like peptide ligases, peptide-binding domain 53
PreATP-grasp domain Rudiment single hybrid motif 54
CheY-like Methylesterase CheB, C-terminal domain 51
PYP-like sensor domain (PAS domain) GAF domain-like 55
Metallo-dependent hydrolases Composite domain of metallo-dependent hydrolases 43
Ligand-binding domain in the NO signalling and Golgi transport P-loop containing nucleoside triphosphate hydrolases 41
Phosphoglucomutase, first 3 domains Phosphoglucomutase, first 3 domains 43
Homodimeric domain of signal transducing histidine kinase CheW-like 42
Methyl-accepting chemotaxis protein (MCP) signaling domain Methyl-accepting chemotaxis protein (MCP) signaling domain 43
Class II aaRS and biotin synthetases Class II aaRS ABD-related 43
Nqo1 middle domain-like Nqo1C-terminal domain-like 43
LuxS/MPP-like metallohydrolase LuxS/MPP-like metallohydrolase 42
Ligand-binding domain in the NO signalling and Golgi transport Homeodomain-like 41
P-loop containing nucleoside triphosphate hydrolases "Winged helix" DNA-binding domain 44
Nqo1 FMN-binding domain-like Nqo1 middle domain-like 43
NAD(P)-binding Rossmann-fold domains Succinyl-CoA synthetase domains 42
GAF domain-like Nucleotide cyclase 44
Nucleotidyltransferase Poly A polymerase C-terminal region-like 43
Calcium ATPase, transduction domain A Calcium ATPase, transmembrane domain M 43
Aldehyde ferredoxin oxidoreductase, N-terminal domain Aldehyde ferredoxin oxidoreductase, C-terminal domains 41
Thioesterase/thiol ester dehydrase-isomerase Thioesterase/thiol ester dehydrase-isomerase 41
Calcium ATPase, transduction domain A HAD-like 43
Nqo1 FMN-binding domain-like Nqo1C-terminal domain-like 43
Nucleic acid-binding proteins Class II aaRS and biotin synthetases 43
"Winged helix" DNA-binding domain Periplasmic binding protein-like II 41
CheY-like C-terminal effector domain of the bipartite response regulators 41
Phosphoglucomutase, first 3 domains Phosphoglucomutase, C-terminal domain 43
HAD-like Calcium ATPase, transmembrane domain M 43
Translation proteins EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 43
Phosphohistidine domain Phosphoenolpyruvate/pyruvate domain 44
P-loop containing nucleoside triphosphate hydrolases EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 43
P-loop containing nucleoside triphosphate hydrolases Restriction endonuclease-like 44
Thioredoxin-like Nqo1C-terminal domain-like 32
Trypsin-like serine proteases PDZ domain-like 32
Translation proteins SH3-like domain Nucleic acid-binding proteins 32
Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain 32
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase Ribosomal protein S5 domain 2-like 33
Glutathione synthetase ATP-binding domain-like Succinyl-CoA synthetase domains 31
Thioredoxin-like Nqo1 middle domain-like 32
Nucleic acid-binding proteins RuvA domain 2-like 33
Nucleotide-diphospho-sugar transferases Trimeric LpxA-like enzymes 32
Sigma3 and sigma4 domains of RNA polymerase sigma factors Sigma3 and sigma4 domains of RNA polymerase sigma factors 32
2Fe-2S ferredoxin-like alpha-helical ferredoxin 32
P-loop containing nucleoside triphosphate hydrolases post-AAA+ oligomerization domain-like 32
4Fe-4S ferredoxins Formate dehydrogenase/DMSO reductase, domains 1-3 32
MoeA N-terminal region -like MoeA C-terminal domain-like 32
2Fe-2S ferredoxin-like CO dehydrogenase ISP C-domain like 31
DnaK suppressor protein DksA, alpha-hairpin domain Glucocorticoid receptor-like (DNA-binding domain) 31
Glutathione synthetase ATP-binding domain-like Single hybrid motif 33
Molybdenum cofactor biosynthesis proteins MoeA C-terminal domain-like 32
Translation proteins Ribosomal protein S5 domain 2-like 31
FAD-binding/transporter-associated domain-like FAD-linked oxidases, C-terminal domain 31
Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like 32
Sensory domain-like Homodimeric domain of signal transducing histidine kinase 33
"Winged helix" DNA-binding domain "Winged helix" DNA-binding domain 33
lambda repressor-like DNA-binding domains RmlC-like cupins 31
MoeA N-terminal region -like Molybdenum cofactor biosynthesis proteins 32
ValRS/IleRS/LeuRS editing domain Nucleotidylyl transferase 33
Thioredoxin-like Nqo1 FMN-binding domain-like 32
P-loop containing nucleoside triphosphate hydrolases HprK N-terminal domain-like 32
Multidrug resistance efflux transporter EmrE Multidrug resistance efflux transporter EmrE 33
Rudiment single hybrid motif Single hybrid motif 33
GAF domain-like CheY-like 33
Nitrite/Sulfite reductase N-terminal domain-like Nitrite and sulphite reductase 4Fe-4S domain-like 33
Single hybrid motif CoA-dependent acyltransferases 32
PUA domain-like Ribosomal protein S5 domain 2-like 33
Nqo5-like HydB/Nqo4-like 32
EF-G C-terminal domain-like Ribosomal protein S5 domain 2-like 31
2Fe-2S ferredoxin-like Formate dehydrogenase/DMSO reductase, domains 1-3 32
GAF domain-like HD-domain/PDEase-like 33
4Fe-4S ferredoxins DHS-like NAD/FAD-binding domain 31
CheY-like HD-domain/PDEase-like 31
Single hybrid motif Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex 32
4Fe-4S ferredoxins Adenine nucleotide alpha hydrolases-like 31
FAD/NAD(P)-binding domain Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain 32
CheY-like Histidine-containing phosphotransfer domain, HPT domain 33
PUA domain-like P-loop containing nucleoside triphosphate hydrolases 33
Sensory domain-like ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 33
PreATP-grasp domain Single hybrid motif 33
Creatinase/prolidase N-terminal domain Creatinase/aminopeptidase 31
Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex CoA-dependent acyltransferases 32
P-loop containing nucleoside triphosphate hydrolases Class I glutamine amidotransferase-like 32
Thiamin diphosphate-binding fold (THDP-binding) 4Fe-4S ferredoxins 33
Aconitase iron-sulfur domain LeuD/IlvD-like 33
PDZ domain-like PDZ domain-like 32
ValRS/IleRS/LeuRS editing domain Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 33
CorA soluble domain-like Magnesium transport protein CorA, transmembrane region 21
Multiheme cytochromes Cytochrome c 22
4Fe-4S ferredoxins ADC-like 21
N-terminal domain of alpha and beta subunits of F1 ATP synthase P-loop containing nucleoside triphosphate hydrolases 21
Thioredoxin-like 4Fe-4S ferredoxins 21
Nucleotide-binding domain 4Fe-4S ferredoxins 22
LysM domain LysM domain 22
TK C-terminal domain-like 4Fe-4S ferredoxins 22
N-terminal domain of alpha and beta subunits of F1 ATP synthase C-terminal domain of alpha and beta subunits of F1 ATP synthase 21
Glutathione synthetase ATP-binding domain-like Phosphoenolpyruvate/pyruvate domain 22
FAD/NAD(P)-binding domain Nucleotide-binding domain 22
Class II aaRS and biotin synthetases ThrRS/AlaRS common domain 22
MurE/MurF N-terminal domain MurD-like peptide ligases, catalytic domain 21
NAD(P)-binding Rossmann-fold domains ACT-like 22
N-terminal nucleophile aminohydrolases (Ntn hydrolases) SIS domain 21
P-loop containing nucleoside triphosphate hydrolases C-terminal domain of alpha and beta subunits of F1 ATP synthase 21
Riboflavin synthase domain-like Ferredoxin reductase-like, C-terminal NADP-linked domain 21
Multiheme cytochromes PKD domain 22
MurE/MurF N-terminal domain MurD-like peptide ligases, peptide-binding domain 21
Nqo1 FMN-binding domain-like 4Fe-4S ferredoxins 21
PreATP-grasp domain Methylglyoxal synthase-like 21
Nicotinate/Quinolinate PRTase N-terminal domain-like Nicotinate/Quinolinate PRTase C-terminal domain-like 21
cAMP-binding domain-like "Winged helix" DNA-binding domain 21
Zn-dependent exopeptidases Bacterial exopeptidase dimerisation domain 21
MurCD N-terminal domain MurD-like peptide ligases, peptide-binding domain 21
Glutathione synthetase ATP-binding domain-like Carbamoyl phosphate synthetase, large subunit connection domain 21
HAMP domain-like CheY-like 22
HSP40/DnaJ peptide-binding domain HSP40/DnaJ peptide-binding domain 22
Alpha-L RNA-binding motif Pseudouridine synthase 21
Nqo1 middle domain-like 4Fe-4S ferredoxins 21
Carbamoyl phosphate synthetase, large subunit connection domain Methylglyoxal synthase-like 21
OMPA-like OmpA-like 22
Ribosomal protein S5 domain 2-like Ribonuclease PH domain 2-like 22
Glycerol-3-phosphate (1)-acyltransferase Acetyl-CoA synthetase-like 22
P-loop containing nucleoside triphosphate hydrolases FtsH protease domain-like 21
CheY-like EspE N-terminal domain-like 22
FabD/lysophospholipase-like Probable ACP-binding domain of malonyl-CoA ACP transacylase 21
Ferritin-like Rubredoxin-like 21
Sm-like ribonucleoproteins Mechanosensitive channel protein MscS (YggB), C-terminal domain 22
CBS-domain pair FAD-binding/transporter-associated domain-like 21
Terpenoid cyclases/Protein prenyltransferases Terpenoid cyclases/Protein prenyltransferases 21
6-phosphogluconate dehydrogenase C-terminal domain-like UDP-glucose/GDP-mannose dehydrogenase C-terminal domain 21
"Winged helix" DNA-binding domain GntR ligand-binding domain-like 21
Nucleotidyltransferase ACT-like 22
Ribonuclease H-like DNA/RNA polymerases 22
Double Clp-N motif P-loop containing nucleoside triphosphate hydrolases 21
S-adenosyl-L-methionine-dependent methyltransferases TPR-like 21
EspE N-terminal domain-like EspE N-terminal domain-like 22
CheY-like CheY-like 22
R1 subunit of ribonucleotide reductase, N-terminal domain PFL-like glycyl radical enzymes 22
PreATP-grasp domain Carbamoyl phosphate synthetase, large subunit connection domain 21
PDZ domain-like Thioredoxin-like 21
Hedgehog/DD-peptidase PGBD-like 22
TPR-like PDZ domain-like 21
lambda integrase-like, N-terminal domain DNA breaking-rejoining enzymes 21
Glutathione synthetase ATP-binding domain-like Phosphohistidine domain 22
Nucleic acid-binding proteins P-loop containing nucleoside triphosphate hydrolases 22
Mechanosensitive channel protein MscS (YggB), transmembrane region Mechanosensitive channel protein MscS (YggB), C-terminal domain 22
GAF domain-like PP2C-like 22
Metal cation-transporting ATPase, ATP-binding domain N Calcium ATPase, transmembrane domain M 21
Molybdenum cofactor-binding domain Molybdenum cofactor-binding domain 21
Fibronectin type III Fibronectin type III 22
Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain Phosphohistidine domain 22
HAMP domain-like HD-domain/PDEase-like 22
Formyltransferase FMT C-terminal domain-like 21
Nqo1C-terminal domain-like 4Fe-4S ferredoxins 21
CheW-like CheY-like 22
Cation efflux protein transmembrane domain-like Cation efflux protein cytoplasmic domain-like 22
FMN-linked oxidoreductases FAD/NAD(P)-binding domain 22
Mechanosensitive channel protein MscS (YggB), transmembrane region Sm-like ribonucleoproteins 22
Lysozyme-like beta-lactamase/transpeptidase-like 22
Penicillin binding protein dimerisation domain beta-lactamase/transpeptidase-like 22
NAD(P)-binding Rossmann-fold domains UDP-glucose/GDP-mannose dehydrogenase C-terminal domain 21
Aldolase 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain 21
Metal cation-transporting ATPase, ATP-binding domain N HAD-like 21
HAMP domain-like Methyl-accepting chemotaxis protein (MCP) signaling domain 22
Calcium ATPase, transduction domain A Metal cation-transporting ATPase, ATP-binding domain N 21
alpha-helical ferredoxin Nucleotide-binding domain 22
Nucleic acid-binding proteins S-adenosyl-L-methionine-dependent methyltransferases 22
FAD/NAD(P)-binding domain 4Fe-4S ferredoxins 22
MurCD N-terminal domain MurD-like peptide ligases, catalytic domain 21
DsbC/DsbG N-terminal domain-like Thioredoxin-like 21
GreA transcript cleavage protein, N-terminal domain FKBP-like 21
2Fe-2S ferredoxin-like ADC-like 21
Nucleotidyltransferase Nucleotidyltransferase substrate binding subunit/domain 22
HlyD-like secretion proteins HlyD-like secretion proteins 22
N-terminal nucleophile aminohydrolases (Ntn hydrolases) Adenine nucleotide alpha hydrolases-like 21
DNA repair protein MutS, domain III P-loop containing nucleoside triphosphate hydrolases 22
vWA-like Quinoprotein alcohol dehydrogenase-like 21
Cupredoxins Integrin alpha N-terminal domain 22
Pectin lyase-like Pectin lyase-like 22
ClpP/crotonase ClpP/crotonase 21
P-loop containing nucleoside triphosphate hydrolases MOP-like 21
PEP carboxykinase N-terminal domain PEP carboxykinase-like 21
PYP-like sensor domain (PAS domain) PP2C-like 22
Chaperone J-domain HSP40/DnaJ peptide-binding domain 22
Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain Phosphoenolpyruvate/pyruvate domain 22
Glutathione synthetase ATP-binding domain-like Methylglyoxal synthase-like 21
GAF domain-like P-loop containing nucleoside triphosphate hydrolases 22
TPR-like Thioredoxin-like 21
FMN-binding split barrel UbiD C-terminal domain-like 22
NAD(P)-binding Rossmann-fold domains TrkA C-terminal domain-like 22
HAMP domain-like Nucleotide cyclase 22
PreATP-grasp domain PreATP-grasp domain 21
CBS-domain pair DHH phosphoesterases 22
Glutathione synthetase ATP-binding domain-like Glutathione synthetase ATP-binding domain-like 21
4Fe-4S ferredoxins HydA/Nqo6-like 21
PDZ domain-like ClpP/crotonase 21
tRNA-binding arm Class II aaRS and biotin synthetases 21
gp5 N-terminal domain-like Phage fibre proteins 22
YlxR-like L30e-like 11
SirA-like DsrEFH-like 11
Methylesterase CheB, C-terminal domain Chemotaxis receptor methyltransferase CheR, N-terminal domain 11
Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 Nucleic acid-binding proteins 11
Succinyl-CoA synthetase domains Citrate synthase 11
Phage tail proteins Phage fibre proteins 11
DNA ligase/mRNA capping enzyme, catalytic domain Nucleic acid-binding proteins 11
Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 Eukaryotic type KH-domain (KH-domain type I) 11
PDZ domain-like Radical SAM enzymes 11
P-loop containing nucleoside triphosphate hydrolases Cobalamin (vitamin B12)-dependent enzymes 11
DNA-glycosylase "Winged helix" DNA-binding domain 11
Rho N-terminal domain-like P-loop containing nucleoside triphosphate hydrolases 11
Pyruvate-ferredoxin oxidoreductase, PFOR, domain III 4Fe-4S ferredoxins 11
FAD-binding/transporter-associated domain-like Uridine diphospho-N-Acetylenolpyruvylglucosamine reductase, MurB, C-terminal domain 11
Putative DNA-binding domain Class II aaRS and biotin synthetases 11
GroEL equatorial domain-like GroEL apical domain-like 11
Enolase N-terminal domain-like Enolase C-terminal domain-like 11
HD-domain/PDEase-like Nucleotidyltransferase 11
Zinc beta-ribbon DNA primase core 11
Nucleotidyltransferase substrate binding subunit/domain Poly A polymerase C-terminal region-like 11
Methylated DNA-protein cysteine methyltransferase domain Methylated DNA-protein cysteine methyltransferase, C-terminal domain 11
EspE N-terminal domain-like CheW-like 11
Prokaryotic type I DNA topoisomerase Zinc beta-ribbon 11
Serine metabolism enzymes domain ACT-like 11
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase DNA mismatch repair protein MutL 11
Sensory domain-like HAMP domain-like 11
CheC-like Surface presentation of antigens (SPOA) 11
Nucleic acid-binding proteins BRCT domain 11
Pre-protein crosslinking domain of SecA Helical scaffold and wing domains of SecA 11
dsRNA-binding domain-like Ribosomal protein S5 domain 2-like 11
FAD/NAD-linked reductases, dimerisation (C-terminal) domain Rhodanese/Cell cycle control phosphatase 11
Transcription factor NusA, N-terminal domain Nucleic acid-binding proteins 11
Translation proteins "Winged helix" DNA-binding domain 11
PurS-like PurM C-terminal domain-like 11
Molybdenum cofactor biosynthesis proteins CinA-like 11
beta-lactamase/transpeptidase-like Penicillin-binding protein 2x (pbp-2x), c-terminal domain 11
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase Type II DNA topoisomerase 11
AbrB/MazE/MraZ-like Nucleic acid-binding proteins 11
Nitrite/Sulfite reductase N-terminal domain-like Nitrite/Sulfite reductase N-terminal domain-like 11
Starch-binding domain-like Pectin lyase-like 11
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase HSP90 C-terminal domain 11
PurM C-terminal domain-like PurM C-terminal domain-like 11
NAD(P)-linked oxidoreductase 4Fe-4S ferredoxins 11
Nucleotidyltransferase substrate binding subunit/domain ACT-like 11
CBS-domain pair PP2C-like 11
P-loop containing nucleoside triphosphate hydrolases PGBD-like 11
Trypsin-like serine proteases TPR-like 11
Insert subdomain of RNA polymerase alpha subunit C-terminal domain of RNA polymerase alpha subunit 11
Homodimeric domain of signal transducing histidine kinase HD-domain/PDEase-like 11
Domain of the SRP/SRP receptor G-proteins P-loop containing nucleoside triphosphate hydrolases 11
Ribosomal protein S5 domain 2-like Nucleic acid-binding proteins 11
Ribbon-helix-helix ACT-like 11
Fe-only hydrogenase Homeodomain-like 11
Aminoacid dehydrogenase-like, N-terminal domain Isocitrate/Isopropylmalate dehydrogenase-like 11
NAD(P)-binding Rossmann-fold domains Glutamyl tRNA-reductase dimerization domain 11
Translation proteins Initiation factor IF2/eIF5b, domain 3 11
Nucleic acid-binding proteins Anticodon-binding domain of PheRS 11
ARM repeat 4Fe-4S ferredoxins 11
Iron-dependent repressor protein, dimerization domain C-terminal domain of transcriptional repressors 11
WD40 repeat-like WD40 repeat-like 11
C-terminal UvrC-binding domain of UvrB RuvA domain 2-like 11
5' to 3' exonuclease, C-terminal subdomain Ribonuclease H-like 11
Pentapeptide repeat-like Pentapeptide repeat-like 11
Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain ACT-like 11
Ribosomal protein L6 Ribosomal protein L6 11
TGS-like Class II aaRS ABD-related 11
PIN domain-like P-loop containing nucleoside triphosphate hydrolases 11
Nucleotide-diphospho-sugar transferases Phosphoglucomutase, first 3 domains 11
Glutamine synthetase, N-terminal domain Glutamine synthetase/guanido kinase 11
post-HMGL domain-like Single hybrid motif 11
Nucleic acid-binding proteins Putative DNA-binding domain 11
alpha/beta-Hydrolases Caspase-like 11
Ribonuclease H-like HRDC-like 11
Aconitase B, N-terminal domain Aconitase iron-sulfur domain 11
CheY-like PilZ domain-like 11
Nqo1C-terminal domain-like Nucleotide-binding domain 11
alpha-helical ferredoxin 4Fe-4S ferredoxins 11
4Fe-4S ferredoxins Homeodomain-like 11
Prokaryotic type KH domain (KH-domain type II) Ribosomal protein S3 C-terminal domain 11
MOP-like MOP-like 11
L9 N-domain-like Ribosomal protein L9 C-domain 11
Trimeric LpxA-like enzymes RmlC-like cupins 11
Tubulin nucleotide-binding domain-like Tubulin C-terminal domain-like 11
Cupredoxins Cytochrome c 11
Methylesterase CheB, C-terminal domain PYP-like sensor domain (PAS domain) 11
Trigger factor ribosome-binding domain Triger factor/SurA peptide-binding domain-like 11
HydA/Nqo6-like Nqo5-like 11
TSP type-3 repeat OmpA-like 11
P-loop containing nucleoside triphosphate hydrolases HRDC-like 11
Translation proteins PRC-barrel domain 11
Pheromone-binding domain of LuxR-like quorum-sensing transcription factors C-terminal effector domain of the bipartite response regulators 11
Mss4-like Peptide methionine sulfoxide reductase 11
Translation initiation factor IF3, N-terminal domain Translation initiation factor IF3, C-terminal domain 11
Translation proteins Translation proteins 11
Adenine nucleotide alpha hydrolases-like ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 11
Ribosomal L11/L12e N-terminal domain Ribosomal protein L11, C-terminal domain 11
Rhodanese/Cell cycle control phosphatase P-loop containing nucleoside triphosphate hydrolases 11
TPR-like Carbohydrate-binding domain 11
Tetrapyrrole methylase S-adenosyl-L-methionine-dependent methyltransferases 11
Periplasmic binding protein-like II ACT-like 11
MFS general substrate transporter Glycerol-3-phosphate (1)-acyltransferase 11
Nucleotide-diphospho-sugar transferases UDP-Glycosyltransferase/glycogen phosphorylase 11
Class I glutamine amidotransferase-like Adenine nucleotide alpha hydrolases-like 11
TGS-like ThrRS/AlaRS common domain 11
Calcium-dependent phosphotriesterase Type I dockerin domain 11
CBS-domain pair Inosine monophosphate dehydrogenase (IMPDH) 11
Aconitase B, N-terminal domain LeuD/IlvD-like 11
Voltage-gated potassium channels NAD(P)-binding Rossmann-fold domains 11
TK C-terminal domain-like Pyruvate-ferredoxin oxidoreductase, PFOR, domain III 11
Ribosomal protein S5 domain 2-like Eukaryotic type KH-domain (KH-domain type I) 11
PurS-like PurM N-terminal domain-like 11
DNA repair protein MutS, domain I P-loop containing nucleoside triphosphate hydrolases 11
Ribosomal protein S5 domain 2-like GHMP Kinase, C-terminal domain 11
EspE N-terminal domain-like GAF domain-like 11
Hsp33 domain HSP33 redox switch-like 11
Eukaryotic type KH-domain (KH-domain type I) Nucleic acid-binding proteins 11
Chorismate mutase II ACT-like 11
MFS general substrate transporter S-adenosyl-L-methionine-dependent methyltransferases 11
Bacterial muramidases Lysozyme-like 11
PUA domain-like S-adenosyl-L-methionine-dependent methyltransferases 11
Ribosomal protein S5 domain 2-like HSP90 C-terminal domain 11
LigT-like HAD-like 11
Nucleic acid-binding proteins Prokaryotic type KH domain (KH-domain type II) 11
HMA, heavy metal-associated domain Calcium ATPase, transduction domain A 11
Class II aaRS and biotin synthetases GAD domain-like 11
P-loop containing nucleoside triphosphate hydrolases RecA protein, C-terminal domain 11
FKBP-like Thioredoxin-like 11
FMN-linked oxidoreductases Alpha subunit of glutamate synthase, C-terminal domain 11
DHH phosphoesterases Nucleotidyltransferase 11
GspK insert domain-like PsbU/PolX domain-like 11
GAF domain-like Homeodomain-like 11
DNA/RNA polymerases Lesion bypass DNA polymerase (Y-family), little finger domain 11
Nucleic acid-binding proteins ArfGap/RecO-like zinc finger 11
Glutamyl tRNA-reductase catalytic, N-terminal domain NAD(P)-binding Rossmann-fold domains 11
Fe-only hydrogenase P-loop containing nucleoside triphosphate hydrolases 11
AbrB/MazE/MraZ-like P-loop containing nucleoside triphosphate hydrolases 11
NAD(P)-binding Rossmann-fold domains 1-deoxy-D-xylulose-5-phosphate reductoisomerase, C-terminal domain 11
DNA repair protein MutS, domain I DNA repair protein MutS, domain III 11
YajQ-like YajQ-like 11
Alpha-L RNA-binding motif S-adenosyl-L-methionine-dependent methyltransferases 11
FAD-linked oxidoreductase ALDH-like 11
Tex N-terminal region-like Ribonuclease H-like 11
HprK N-terminal domain-like DHH phosphoesterases 11
NTF2-like Sec-C motif 11
Carboxypeptidase regulatory domain-like Starch-binding domain-like 11
NusB-like S-adenosyl-L-methionine-dependent methyltransferases 11
FKBP-like FKBP-like 11
PK beta-barrel domain-like PK C-terminal domain-like 11
Nucleic acid-binding proteins DNA helicase RuvA subunit, C-terminal domain 11
DNA ligase/mRNA capping enzyme, catalytic domain RuvA domain 2-like 11
all-alpha NTP pyrophosphatases all-alpha NTP pyrophosphatases 11
UbiD C-terminal domain-like UbiD C-terminal domain-like 11
Cadherin-like Cadherin-like 11
Periplasmic binding protein-like II Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain 11
Acylphosphatase/BLUF domain-like YrdC/RibB 11
Nucleotide-diphospho-sugar transferases P-loop containing nucleoside triphosphate hydrolases 11
Nucleotidyltransferase TGS-like 11
Homocysteine S-methyltransferase FAD-linked oxidoreductase 11
Aspartate/glutamate racemase Aspartate/glutamate racemase 11
HMA, heavy metal-associated domain Calcium ATPase, transmembrane domain M 11
P-loop containing nucleoside triphosphate hydrolases Prokaryotic type KH domain (KH-domain type II) 11
Sensory domain-like Sensory domain-like 11
UBA-like Elongation factor Ts (EF-Ts), dimerisation domain 11
Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) Translation proteins 11
Chemotaxis receptor methyltransferase CheR, N-terminal domain PYP-like sensor domain (PAS domain) 11
MetI-like MetI-like 11
HMA, heavy metal-associated domain HAD-like 11
Trm112p-like S-adenosyl-L-methionine-dependent methyltransferases 11
DNA repair protein MutS, domain II DNA repair protein MutS, domain III 11
Formate/glycerate dehydrogenase catalytic domain-like Serine metabolism enzymes domain 11
EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain "Winged helix" DNA-binding domain 11
HMA, heavy metal-associated domain HMA, heavy metal-associated domain 11
S13-like H2TH domain Glucocorticoid receptor-like (DNA-binding domain) 11
Tetrapyrrole methylase HemD-like 11
PheT/TilS domain Putative DNA-binding domain 11
Carboxypeptidase regulatory domain-like Pectin lyase-like 11
Flavoproteins 4Fe-4S ferredoxins 11
5' to 3' exonuclease, C-terminal subdomain DNA/RNA polymerases 11
Rho N-terminal domain-like Nucleic acid-binding proteins 11
Actin-like ATPase domain Heat shock protein 70kD (HSP70), peptide-binding domain 11
PHP domain-like P-loop containing nucleoside triphosphate hydrolases 11
PYP-like sensor domain (PAS domain) Methyl-accepting chemotaxis protein (MCP) signaling domain 11
Class II aaRS and biotin synthetases Anticodon-binding domain of PheRS 11
"Winged helix" DNA-binding domain C-terminal domain of transcriptional repressors 11
P-loop containing nucleoside triphosphate hydrolases TGS-like 11
ClpP/crotonase NfeD domain-like 11
Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 11
Actin-like ATPase domain Heat shock protein 70kD (HSP70), C-terminal subdomain 11
L domain-like Cysteine proteinases 11
Nucleotidylyl transferase An anticodon-binding domain of class I aminoacyl-tRNA synthetases 11
DNA clamp DNA clamp 11
Fe,Mn superoxide dismutase (SOD), N-terminal domain Fe,Mn superoxide dismutase (SOD), C-terminal domain 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) Alpha subunit of glutamate synthase, C-terminal domain 11
Fibronectin type III Cytochrome c 11
NAD(P)-binding Rossmann-fold domains Isocitrate/Isopropylmalate dehydrogenase-like 11
Cytochrome c oxidase subunit II-like, transmembrane region Cytochrome c 11
GAF domain-like Phosphohistidine domain 11
Nucleotide-binding domain Nucleotide-binding domain 11
PYP-like sensor domain (PAS domain) Histidine-containing phosphotransfer domain, HPT domain 11
lambda repressor-like DNA-binding domains LexA/Signal peptidase 11
4Fe-4S ferredoxins FMN-dependent nitroreductase-like 11
S-adenosyl-L-methionine-dependent methyltransferases Putative methyltransferase TM0872, insert domain 11
Adenine nucleotide alpha hydrolases-like Homodimeric domain of signal transducing histidine kinase 11
OMPA-like TSP type-3 repeat 11
NAD(P)-binding Rossmann-fold domains N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE) 11
Adenine nucleotide alpha hydrolases-like GMP synthetase C-terminal dimerisation domain 11
HD-domain/PDEase-like P-loop containing nucleoside triphosphate hydrolases 11
Nucleotidylyl transferase Alpha-L RNA-binding motif 11
S-adenosyl-L-methionine-dependent methyltransferases NAD(P)-binding Rossmann-fold domains 11
NAD(P)-binding Rossmann-fold domains Citrate synthase 11
Transmembrane di-heme cytochromes a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) 11
HAMP domain-like EAL domain-like 11
Tex N-terminal region-like RuvA domain 2-like 11
RuvA domain 2-like RuvA domain 2-like 11
P-loop containing nucleoside triphosphate hydrolases Initiation factor IF2/eIF5b, domain 3 11
Protein kinase-like (PK-like) P-loop containing nucleoside triphosphate hydrolases 11
Trypsin-like serine proteases HCP-like 11
cAMP-binding domain-like Nucleotide cyclase 11
Homeodomain-like Homeodomain-like 11
Homocysteine S-methyltransferase Cobalamin (vitamin B12)-binding domain 11
Voltage-gated potassium channels TrkA C-terminal domain-like 11
DHH phosphoesterases Poly A polymerase C-terminal region-like 11
Chaperone J-domain DnaJ/Hsp40 cysteine-rich domain 11
HD-domain/PDEase-like TGS-like 11
Putative DNA-binding domain Anticodon-binding domain of PheRS 11
4Fe-4S ferredoxins P-loop containing nucleoside triphosphate hydrolases 11
LysM domain Cysteine proteinases 11
YbaK/ProRS associated domain Class II aaRS ABD-related 11
Ribosomal protein L7/12, oligomerisation (N-terminal) domain ClpS-like 11
Penicillin binding protein dimerisation domain Penicillin-binding protein 2x (pbp-2x), c-terminal domain 11
PheT/TilS domain Class II aaRS and biotin synthetases 11
Trimeric LpxA-like enzymes Phosphoglucomutase, first 3 domains 11
Metallo-dependent hydrolases Radical SAM enzymes 11
S-adenosyl-L-methionine-dependent methyltransferases S-adenosyl-L-methionine-dependent methyltransferases 11
Cytidine deaminase-like Nucleotide-diphospho-sugar transferases 11
beta-lactamase/transpeptidase-like beta-lactamase/transpeptidase-like 11
Ribonuclease H-like Nucleic acid-binding proteins 11
"Winged helix" DNA-binding domain S-adenosyl-L-methionine-dependent methyltransferases 11
Radical SAM enzymes RuvA domain 2-like 11
N-terminal domain of MutM-like DNA repair proteins S13-like H2TH domain 11
N-terminal domain of MutM-like DNA repair proteins Glucocorticoid receptor-like (DNA-binding domain) 11
HAMP domain-like GAF domain-like 11
Multiheme cytochromes Integrin alpha N-terminal domain 11
EspE N-terminal domain-like ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 11
"Winged helix" DNA-binding domain Class II aaRS and biotin synthetases 11
Adenine nucleotide alpha hydrolases-like PheT/TilS domain 11
Homocysteine S-methyltransferase Dihydropteroate synthetase-like 11
MFS general substrate transporter Acetyl-CoA synthetase-like 11
CheY-like PP2C-like 11
Cytochrome c oxidase subunit II-like, transmembrane region Cupredoxins 11
EspE N-terminal domain-like Homodimeric domain of signal transducing histidine kinase 11
P-loop containing nucleoside triphosphate hydrolases Signal peptide-binding domain 11
Acetyl-CoA synthetase-like ACP-like 11
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase HD-domain/PDEase-like 11
Ankyrin repeat Ankyrin repeat 11
CBS-domain pair Nucleotidyltransferase 11
P-loop containing nucleoside triphosphate hydrolases Smc hinge domain 11
IlvD/EDD N-terminal domain-like LeuD/IlvD-like 11
Nucleic acid-binding proteins PheT/TilS domain 11
Lysozyme-like LysM domain 11
ADC synthase D-aminoacid aminotransferase-like PLP-dependent enzymes 11
Heat shock protein 70kD (HSP70), peptide-binding domain Heat shock protein 70kD (HSP70), C-terminal subdomain 11
Ribosomal protein S5 domain 2-like Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 11
Nucleotidyltransferase Nucleotidyltransferase 11
EAL domain-like HD-domain/PDEase-like 11
Nucleotidylyl transferase Ribosomal protein L25-like 11
Protease propeptides/inhibitors Subtilisin-like 11
Nudix Nudix 11
SufE/NifU Fe-S cluster assembly (FSCA) domain-like 11
Type II DNA topoisomerase GyrA/ParC C-terminal domain-like 11
CarD-like TRCF domain-like 11
Clc chloride channel CBS-domain pair 11
LysM domain TPR-like 11
Dihydropteroate synthetase-like Cobalamin (vitamin B12)-binding domain 11
Translation proteins ThrRS/AlaRS common domain 11
Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 1-deoxy-D-xylulose-5-phosphate reductoisomerase, C-terminal domain 11
YjeF N-terminal domain-like Ribokinase-like 11
DNA repair protein MutS, domain I DNA repair protein MutS, domain II 11
FAD/NAD(P)-binding domain Rhodanese/Cell cycle control phosphatase 11
ARM repeat ARM repeat 11
GAF domain-like Methyl-accepting chemotaxis protein (MCP) signaling domain 11
ThrRS/AlaRS common domain Class II aaRS ABD-related 11
Restriction endonuclease-like Zinc beta-ribbon 11
CheC-like CheY-like 11
Methylesterase CheB, C-terminal domain S-adenosyl-L-methionine-dependent methyltransferases 11
PHP domain-like AF1531-like 11
GAF domain-like Phosphoenolpyruvate/pyruvate domain 11
Thiamin phosphate synthase Ribokinase-like 11
HprK N-terminal domain-like PEP carboxykinase-like 11
P-loop containing nucleoside triphosphate hydrolases TRCF domain-like 11
Folate-binding domain Aminomethyltransferase beta-barrel domain 11
Homocysteine S-methyltransferase Methionine synthase domain 11
Carboxypeptidase regulatory domain-like Carboxypeptidase regulatory domain-like 11
Formate/glycerate dehydrogenase catalytic domain-like ACT-like 11
Hypothetical protein PA1324 Hypothetical protein PA1324 11
4Fe-4S ferredoxins Nitrite and sulphite reductase 4Fe-4S domain-like 11
MesJ substrate recognition domain-like PheT/TilS domain 11
Nucleic acid-binding proteins GAD domain-like 11
Zinc beta-ribbon Zinc beta-ribbon 11
S-adenosylmethionine synthetase S-adenosylmethionine synthetase 11
Nitrite and sulphite reductase 4Fe-4S domain-like Nitrite and sulphite reductase 4Fe-4S domain-like 11
Actin-like ATPase domain HD-domain/PDEase-like 11
PheT/TilS domain Anticodon-binding domain of PheRS 11
NAD(P)-binding Rossmann-fold domains LDH C-terminal domain-like 11
Transcription factor NusA, N-terminal domain Prokaryotic type KH domain (KH-domain type II) 11
P-loop containing nucleoside triphosphate hydrolases Helical scaffold and wing domains of SecA 11
ACP-like Glycerol-3-phosphate (1)-acyltransferase 11
2,3-Bisphosphoglycerate-independent phosphoglycerate mutase, substrate-binding domain Alkaline phosphatase-like 11
FAD/NAD(P)-binding domain FAD-linked reductases, C-terminal domain 11
Obg GTP-binding protein N-terminal domain P-loop containing nucleoside triphosphate hydrolases 11
Glutamyl tRNA-reductase catalytic, N-terminal domain Glutamyl tRNA-reductase dimerization domain 11
Rudiment single hybrid motif post-HMGL domain-like 11
P-loop containing nucleoside triphosphate hydrolases CarD-like 11
TrkA C-terminal domain-like TrkA C-terminal domain-like 11
NagB/RpiA/CoA transferase-like Acyl-CoA N-acyltransferases (Nat) 11
Ribulose-phoshate binding barrel Nitrite and sulphite reductase 4Fe-4S domain-like 11
Adenine nucleotide alpha hydrolases-like Argininosuccinate synthetase, C-terminal domain 11
Coiled-coil domain of nucleotide exchange factor GrpE Head domain of nucleotide exchange factor GrpE 11
Nitrite/Sulfite reductase N-terminal domain-like 4Fe-4S ferredoxins 11
FAD/NAD(P)-binding domain FAD/NAD(P)-binding domain 11
PPK N-terminal domain-like Phospholipase D/nuclease 11
Nucleotide-diphospho-sugar transferases Phosphoglucomutase, C-terminal domain 11
TTHA1013/TTHA0281-like Ribbon-helix-helix 11
Nucleotidyltransferase substrate binding subunit/domain Nucleotidyltransferase substrate binding subunit/domain 11
Radical SAM enzymes TPR-like 11
RuvA domain 2-like MCP/YpsA-like 11
FMN-linked oxidoreductases Nucleotide-binding domain 11
Ribonuclease PH domain 2-like Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 11
Ribosomal protein S5 domain 2-like Type II DNA topoisomerase 11
RBP11-like subunits of RNA polymerase C-terminal domain of RNA polymerase alpha subunit 11
alpha/beta-Hydrolases alpha/beta-Hydrolases 11
HRDC-like HRDC-like 11
Fibronectin type III NHL repeat 11
PHP domain-like UDP-Glycosyltransferase/glycogen phosphorylase 11
ValRS/IleRS/LeuRS editing domain tRNA-binding arm 11
Caspase-like Toll/Interleukin receptor TIR domain 11
alpha/beta-Hydrolases Toll/Interleukin receptor TIR domain 11
CBS-domain pair Poly A polymerase C-terminal region-like 11
NHL repeat Concanavalin A-like lectins/glucanases 11
Phage tail proteins gp5 N-terminal domain-like 11
Cobalamin (vitamin B12)-binding domain Cobalamin (vitamin B12)-dependent enzymes 11
Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain 11
N-utilization substance G protein NusG, N-terminal domain Translation proteins SH3-like domain 11
GIY-YIG endonuclease RuvA domain 2-like 11
Sporulation related repeat Cysteine proteinases 11
HAD-like Ferritin-like 11
Ankyrin repeat PDZ domain-like 11
Nucleotide-diphospho-sugar transferases Guanosine diphospho-D-mannose pyrophosphorylase/mannose-6-phosphate isomerase linker domain 11
PIN domain-like Ribonuclease H-like 11
Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases tRNA-binding arm 11
P-loop containing nucleoside triphosphate hydrolases SMR domain-like 11
alpha-helical ferredoxin alpha-helical ferredoxin 11
RuvA domain 2-like DNA helicase RuvA subunit, C-terminal domain 11
Homodimeric domain of signal transducing histidine kinase Nucleotide cyclase 11
Acyl-CoA N-acyltransferases (Nat) Acyl-CoA N-acyltransferases (Nat) 11
E set domains (Trans)glycosidases 11
CO dehydrogenase molybdoprotein N-domain-like Molybdenum cofactor-binding domain 11
HD-domain/PDEase-like ACT-like 11
Aldolase post-HMGL domain-like 11
Carbamate kinase-like ACT-like 11
PPK N-terminal domain-like PHP14-like 11
Sensory domain-like PYP-like sensor domain (PAS domain) 11
HprK N-terminal domain-like CBS-domain pair 11
Nqo1C-terminal domain-like alpha-helical ferredoxin 11
Poly A polymerase C-terminal region-like ACT-like 11
TolB, N-terminal domain Tricorn protease N-terminal domain 11
Class II aaRS and biotin synthetases YbaK/ProRS associated domain 11
Class II aaRS and biotin synthetases Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) 11
E set domains E set domains 11
PIN domain-like 5' to 3' exonuclease, C-terminal subdomain 11
Phage tail proteins Phage tail proteins 11
Glutathione synthetase ATP-binding domain-like Aldolase 11
Metallo-hydrolase/oxidoreductase Flavoproteins 11
CbiG N-terminal domain-like CobE/GbiG C-terminal domain-like 11
P-loop containing nucleoside triphosphate hydrolases C-terminal UvrC-binding domain of UvrB 11
Chorismate mutase II Periplasmic binding protein-like II 11
Thioredoxin-like Six-hairpin glycosidases 11
Ribonuclease PH domain 2-like Ribonuclease PH domain 2-like 11
HAMP domain-like Histidine-containing phosphotransfer domain, HPT domain 11
TGS-like ACT-like 11
FliG FliG 11
Ribokinase-like Nucleotidylyl transferase 11
Trigger factor ribosome-binding domain FKBP-like 11
Macro domain-like Zn-dependent exopeptidases 11
DnaJ/Hsp40 cysteine-rich domain HSP40/DnaJ peptide-binding domain 11
HydA/Nqo6-like HydB/Nqo4-like 11
Rudiment single hybrid motif Aldolase 11
Carbamoyl phosphate synthetase, small subunit N-terminal domain Class I glutamine amidotransferase-like 11
Glycosyl hydrolase domain Protein kinase-like (PK-like) 11
Prokaryotic type KH domain (KH-domain type II) Prokaryotic type KH domain (KH-domain type II) 11
Homo-oligomeric flavin-containing Cys decarboxylases, HFCD CoaB-like 11
PHP14-like Phospholipase D/nuclease 11
TPR-like HCP-like 11
Ribonuclease PH domain 2-like Eukaryotic type KH-domain (KH-domain type I) 11
Adenine nucleotide alpha hydrolases-like GAF domain-like 11
L,D-transpeptidase catalytic domain-like Sporulation related repeat 11
Periplasmic binding protein-like II Homodimeric domain of signal transducing histidine kinase 11
Glutamine synthetase/guanido kinase GatB/YqeY motif 11
S-adenosyl-L-methionine-dependent methyltransferases PYP-like sensor domain (PAS domain) 11
Phosphoenolpyruvate/pyruvate domain PK C-terminal domain-like 11
4Fe-4S ferredoxins FMN-linked oxidoreductases 11
Methylglyoxal synthase-like Cytidine deaminase-like 11
TPR-like L,D-transpeptidase catalytic domain-like 11
Thiamin diphosphate-binding fold (THDP-binding) Pyruvate-ferredoxin oxidoreductase, PFOR, domain III 11
Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain Nucleotidylyl transferase 11
Aminopeptidase/glucanase lid domain Zn-dependent exopeptidases 11
RNase III domain-like dsRNA-binding domain-like 11
Thiamin diphosphate-binding fold (THDP-binding) DHS-like NAD/FAD-binding domain 11
Histidine-containing phosphotransfer domain, HPT domain EspE N-terminal domain-like 11
Integrin alpha N-terminal domain Arabinanase/levansucrase/invertase 11
Nucleotidylyl transferase Riboflavin kinase-like 11
PIN domain-like DNA/RNA polymerases 11
Aldolase Single hybrid motif 11
OmpA-like OmpA-like 11
DNA ligase/mRNA capping enzyme, catalytic domain BRCT domain 11
Fibronectin type III Concanavalin A-like lectins/glucanases 11
Glutathione synthetase ATP-binding domain-like post-HMGL domain-like 11
Tex N-terminal region-like Nucleic acid-binding proteins 11
Insert subdomain of RNA polymerase alpha subunit RBP11-like subunits of RNA polymerase 11
Riboflavin synthase domain-like Riboflavin synthase domain-like 11
DNA repair protein MutS, domain II P-loop containing nucleoside triphosphate hydrolases 11
Putative DNA-binding domain Phoshotransferase/anion transport protein 11
Carbamate kinase-like PUA domain-like 11
Ribosomal protein S5 domain 2-like DNA mismatch repair protein MutL 11
GAF domain-like Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain 11
Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) ThrRS/AlaRS common domain 11
(Trans)glycosidases Glycosyl hydrolase domain 11
Eukaryotic type KH-domain (KH-domain type I) HD-domain/PDEase-like 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) PRTase-like 11
NAD(P)-binding Rossmann-fold domains Siroheme synthase middle domains-like 11
4Fe-4S ferredoxins Fe-only hydrogenase 11
EspE N-terminal domain-like CheC-like 11
GroEL-intermediate domain like GroEL apical domain-like 11
P-loop containing nucleoside triphosphate hydrolases TPR-like 11
4Fe-4S ferredoxins Radical SAM enzymes 11
Acylphosphatase/BLUF domain-like Actin-like ATPase domain 11
L30e-like alpha/beta knot 11
LysM domain L,D-transpeptidase catalytic domain-like 11
P-loop containing nucleoside triphosphate hydrolases Pre-protein crosslinking domain of SecA 11
Tetrapyrrole methylase Class I glutamine amidotransferase-like 11
NAD(P)-binding Rossmann-fold domains Serine metabolism enzymes domain 11
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase Nucleotide cyclase 11
Diaminopimelate epimerase-like Diaminopimelate epimerase-like 11
(Trans)glycosidases Fibronectin type III 11
Trimeric LpxA-like enzymes Phosphoglucomutase, C-terminal domain 11
P-loop containing nucleoside triphosphate hydrolases TrpR-like 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) FMN-linked oxidoreductases 11
Periplasmic binding protein-like II ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 11
GAF domain-like EAL domain-like 11
RuvA domain 2-like BRCT domain 11
HIT-like HIT-like 11
YrdC/RibB Actin-like ATPase domain 11
(Trans)glycosidases Protein kinase-like (PK-like) 11
Tetrapyrrole methylase P-loop containing nucleoside triphosphate hydrolases 11
Class I glutamine amidotransferase-like GMP synthetase C-terminal dimerisation domain 11
Methionine synthase domain Cobalamin (vitamin B12)-binding domain 11
Ribonuclease PH domain 2-like Nucleic acid-binding proteins 11
Multidrug efflux transporter AcrB transmembrane domain S-adenosyl-L-methionine-dependent methyltransferases 11
PurM N-terminal domain-like PurM N-terminal domain-like 11
TGS-like Class II aaRS and biotin synthetases 11
Glucocorticoid receptor-like (DNA-binding domain) P-loop containing nucleoside triphosphate hydrolases 11
"Winged helix" DNA-binding domain LexA/Signal peptidase 11
Rhodanese/Cell cycle control phosphatase Rhodanese/Cell cycle control phosphatase 11
Ribonuclease H-like RuvA domain 2-like 11
Periplasmic binding protein-like II GlnB-like 11
Adenine nucleotide alpha hydrolases-like MesJ substrate recognition domain-like 11
Nucleotidylyl transferase tRNA-binding arm 11
"Helical backbone" metal receptor "Helical backbone" metal receptor 11
YhbC-like, N-terminal domain YhbC-like, C-terminal domain 11
Cobalamin (vitamin B12)-binding domain TPR-like 11
PK beta-barrel domain-like Phosphoenolpyruvate/pyruvate domain 11
GIY-YIG endonuclease C-terminal UvrC-binding domain of UvrB 11
DNA repair protein MutS, domain III SMR domain-like 11
PUA domain-like alpha/beta knot 11
PreATP-grasp domain post-HMGL domain-like 11
GroEL equatorial domain-like GroEL-intermediate domain like 11
Class II aaRS and biotin synthetases Translation proteins 11
N-terminal domain of DnaB helicase P-loop containing nucleoside triphosphate hydrolases 11
Zinc beta-ribbon Prokaryotic SH3-related domain 11
Class II aaRS and biotin synthetases C-terminal domain of transcriptional repressors 11
Dihydropteroate synthetase-like Methionine synthase domain 11
Cytidine deaminase-like Dihydrofolate reductase-like 11
Fibronectin type III Multiheme cytochromes 11
YrdC/RibB RibA-like 11
FAD-binding/transporter-associated domain-like CO dehydrogenase flavoprotein C-terminal domain-like 11
PreATP-grasp domain Aldolase 11
P-loop containing nucleoside triphosphate hydrolases WD40 repeat-like 11
Cobalamin (vitamin B12)-binding domain P-loop containing nucleoside triphosphate hydrolases 11

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