SUPERFAMILY 1.75 HMM library and genome assignments server

Domain combination pairs in Pseudogulbenkiania sp. NH8B

All pairs of domain combinations at the superfamily level are listed here.
The identification of domain pairs does not account for the possibility of non-contiguous domains. Inserted, or interlaced, domains are seen as having a simple pair ordering.

  • For a list of unique full length architectures for this genome click here (can be slow).
Adjacent domain pairs graph

Graph of adjacent domain pairs.


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Domain combination pairs

731 domain combination pairs.
Click on a column heading to sort that column, or the 'View' button to see domain architetures for that domain pair combination.

Superfamily (N) Superfamily (C) Number of occurrances Number unique
"Winged helix" DNA-binding domain Periplasmic binding protein-like II 732
Homodimeric domain of signal transducing histidine kinase ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 3115
P-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases 2713
Multidrug resistance efflux transporter EmrE Multidrug resistance efflux transporter EmrE 222
PYP-like sensor domain (PAS domain) Nucleotide cyclase 1915
NAD(P)-binding Rossmann-fold domains 6-phosphogluconate dehydrogenase C-terminal domain-like 183
EAL domain-like Nucleotide cyclase 1815
PYP-like sensor domain (PAS domain) PYP-like sensor domain (PAS domain) 1814
CheY-like C-terminal effector domain of the bipartite response regulators 151
FAD/NAD(P)-binding domain FAD-linked reductases, C-terminal domain 135
PYP-like sensor domain (PAS domain) Homodimeric domain of signal transducing histidine kinase 1310
PYP-like sensor domain (PAS domain) ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 1310
Thioredoxin-like GST C-terminal domain-like 131
Actin-like ATPase domain Actin-like ATPase domain 133
Homeodomain-like Tetracyclin repressor-like, C-terminal domain 121
Homeodomain-like Homeodomain-like 125
NAD(P)-binding Rossmann-fold domains Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 124
PYP-like sensor domain (PAS domain) EAL domain-like 119
Riboflavin synthase domain-like Ferredoxin reductase-like, C-terminal NADP-linked domain 115
P-loop containing nucleoside triphosphate hydrolases Translation proteins 117
Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) 105
GAF domain-like Nucleotide cyclase 109
"Winged helix" DNA-binding domain Dimeric alpha+beta barrel 101
Acyl-CoA dehydrogenase NM domain-like Acyl-CoA dehydrogenase C-terminal domain-like 103
GroES-like NAD(P)-binding Rossmann-fold domains 92
Aminoacid dehydrogenase-like, N-terminal domain NAD(P)-binding Rossmann-fold domains 94
"Winged helix" DNA-binding domain PLP-dependent transferases 91
P-loop containing nucleoside triphosphate hydrolases Homeodomain-like 94
P-loop containing nucleoside triphosphate hydrolases MOP-like 91
PreATP-grasp domain Glutathione synthetase ATP-binding domain-like 95
"Winged helix" DNA-binding domain GntR ligand-binding domain-like 81
Thiolase-like Thiolase-like 81
Multidrug efflux transporter AcrB transmembrane domain Multidrug efflux transporter AcrB transmembrane domain 83
Formate/glycerate dehydrogenase catalytic domain-like NAD(P)-binding Rossmann-fold domains 82
Ribosomal protein S5 domain 2-like P-loop containing nucleoside triphosphate hydrolases 86
Sigma2 domain of RNA polymerase sigma factors Sigma3 and sigma4 domains of RNA polymerase sigma factors 83
PYP-like sensor domain (PAS domain) CheY-like 88
Composite domain of metallo-dependent hydrolases Metallo-dependent hydrolases 75
HAMP domain-like ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 74
Calcium ATPase, transduction domain A Calcium ATPase, transmembrane domain M 76
Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains 72
Thiamin diphosphate-binding fold (THDP-binding) TK C-terminal domain-like 74
GAF domain-like EAL domain-like 76
ABC transporter transmembrane region P-loop containing nucleoside triphosphate hydrolases 72
CheY-like P-loop containing nucleoside triphosphate hydrolases 72
Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains 72
Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains Multidrug efflux transporter AcrB transmembrane domain 72
Calcium ATPase, transduction domain A HAD-like 76
Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains Multidrug efflux transporter AcrB transmembrane domain 72
Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains 72
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase CheY-like 77
HAD-like Calcium ATPase, transmembrane domain M 76
Class I glutamine amidotransferase-like Homeodomain-like 62
Glutathione synthetase ATP-binding domain-like Rudiment single hybrid motif 63
P-loop containing nucleoside triphosphate hydrolases EF-G C-terminal domain-like 63
Alpha-L RNA-binding motif Pseudouridine synthase 62
2Fe-2S ferredoxin-like Ferredoxin reductase-like, C-terminal NADP-linked domain 62
Triger factor/SurA peptide-binding domain-like FKBP-like 64
CheY-like Homeodomain-like 61
MurD-like peptide ligases, catalytic domain MurD-like peptide ligases, peptide-binding domain 63
Translation proteins EF-G C-terminal domain-like 63
2Fe-2S ferredoxin-like Riboflavin synthase domain-like 62
HAMP domain-like Homodimeric domain of signal transducing histidine kinase 63
"Winged helix" DNA-binding domain GAF domain-like 61
Formate dehydrogenase/DMSO reductase, domains 1-3 ADC-like 64
PreATP-grasp domain Rudiment single hybrid motif 63
Nucleotidylyl transferase Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 65
Thiamin diphosphate-binding fold (THDP-binding) DHS-like NAD/FAD-binding domain 51
EF-G C-terminal domain-like EF-G C-terminal domain-like 52
Homodimeric domain of signal transducing histidine kinase CheY-like 55
FAD-binding/transporter-associated domain-like FAD-linked oxidases, C-terminal domain 53
ISP domain Bet v1-like 52
Glutamine synthetase, N-terminal domain Glutamine synthetase/guanido kinase 51
lambda repressor-like DNA-binding domains RmlC-like cupins 51
Zn-dependent exopeptidases Bacterial exopeptidase dimerisation domain 51
PYP-like sensor domain (PAS domain) Methyl-accepting chemotaxis protein (MCP) signaling domain 51
cAMP-binding domain-like "Winged helix" DNA-binding domain 51
Cytochrome c Cytochrome c 53
PurM N-terminal domain-like PurM C-terminal domain-like 42
Translation proteins EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 43
CheY-like Nucleotide cyclase 44
RmlC-like cupins Homeodomain-like 42
PLP-binding barrel Alanine racemase C-terminal domain-like 42
lambda repressor-like DNA-binding domains LexA/Signal peptidase 41
P-loop containing nucleoside triphosphate hydrolases C-terminal domain of alpha and beta subunits of F1 ATP synthase 41
Histidine-containing phosphotransfer domain, HPT domain ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 43
P-loop containing nucleoside triphosphate hydrolases EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 43
HlyD-like secretion proteins HlyD-like secretion proteins 42
Sigma3 and sigma4 domains of RNA polymerase sigma factors Sigma3 and sigma4 domains of RNA polymerase sigma factors 42
ACT-like Formyltransferase 41
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase Ribosomal protein S5 domain 2-like 44
PYP-like sensor domain (PAS domain) GAF domain-like 44
P-loop containing nucleoside triphosphate hydrolases "Winged helix" DNA-binding domain 43
Folate-binding domain Aminomethyltransferase beta-barrel domain 42
N-terminal domain of alpha and beta subunits of F1 ATP synthase C-terminal domain of alpha and beta subunits of F1 ATP synthase 41
CheY-like EAL domain-like 44
EF-G C-terminal domain-like Ribosomal protein S5 domain 2-like 42
N-terminal domain of alpha and beta subunits of F1 ATP synthase P-loop containing nucleoside triphosphate hydrolases 41
TPR-like TPR-like 44
"Winged helix" DNA-binding domain "Winged helix" DNA-binding domain 43
Diaminopimelate epimerase-like Diaminopimelate epimerase-like 41
Enolase N-terminal domain-like Enolase C-terminal domain-like 31
Phospholipase D/nuclease Phospholipase D/nuclease 32
HD-domain/PDEase-like Nucleotidyltransferase 32
P-loop containing nucleoside triphosphate hydrolases Restriction endonuclease-like 33
Aconitase iron-sulfur domain LeuD/IlvD-like 33
P-loop containing nucleoside triphosphate hydrolases Hypothetical protein YjiA, C-terminal domain 31
Nqo1 FMN-binding domain-like Nqo1 middle domain-like 33
P-loop containing nucleoside triphosphate hydrolases CBS-domain pair 31
Nqo1 middle domain-like Nqo1C-terminal domain-like 33
Phage tail proteins Phage fibre proteins 31
HMA, heavy metal-associated domain Calcium ATPase, transmembrane domain M 33
HAMP domain-like PYP-like sensor domain (PAS domain) 33
Single hybrid motif CoA-dependent acyltransferases 32
MurCD N-terminal domain MurD-like peptide ligases, peptide-binding domain 31
MurCD N-terminal domain MurD-like peptide ligases, catalytic domain 31
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase CheW-like 32
Nucleic acid-binding proteins P-loop containing nucleoside triphosphate hydrolases 33
FAD-linked reductases, C-terminal domain 4Fe-4S ferredoxins 31
MetI-like MetI-like 31
PDZ domain-like PDZ domain-like 33
2Fe-2S ferredoxin-like 4Fe-4S ferredoxins 33
Sensory domain-like Methyl-accepting chemotaxis protein (MCP) signaling domain 32
Histidine-containing phosphotransfer domain, HPT domain Homodimeric domain of signal transducing histidine kinase 32
RuvA domain 2-like Nucleic acid-binding proteins 33
Phage tail proteins gp5 N-terminal domain-like 31
Translation proteins ThrRS/AlaRS common domain 32
Nucleic acid-binding proteins Nucleic acid-binding proteins 33
FAD-binding/transporter-associated domain-like alpha-helical ferredoxin 32
ACP-like Acetyl-CoA synthetase-like 33
Creatinase/prolidase N-terminal domain Creatinase/aminopeptidase 31
FAD-linked oxidases, C-terminal domain alpha-helical ferredoxin 32
ValRS/IleRS/LeuRS editing domain Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 32
FAD/NAD(P)-binding domain FAD/NAD-linked reductases, dimerisation (C-terminal) domain 33
FAD/NAD(P)-binding domain Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain 33
CheW-like CheY-like 33
Nucleic acid-binding proteins Class II aaRS and biotin synthetases 33
Phosphohistidine domain Phosphoenolpyruvate/pyruvate domain 33
FAD/NAD(P)-binding domain FAD/NAD(P)-binding domain 32
FAD/NAD(P)-binding domain 4Fe-4S ferredoxins 31
lambda repressor-like DNA-binding domains Periplasmic binding protein-like I 31
Adenine nucleotide alpha hydrolases-like DHS-like NAD/FAD-binding domain 31
Translation proteins Ribosomal protein S5 domain 2-like 31
TPR-like UDP-Glycosyltransferase/glycogen phosphorylase 32
Double Clp-N motif P-loop containing nucleoside triphosphate hydrolases 32
"Winged helix" DNA-binding domain Chorismate lyase-like 31
Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like 32
P-loop containing nucleoside triphosphate hydrolases Class I glutamine amidotransferase-like 31
Histidine-containing phosphotransfer domain, HPT domain CheW-like 32
Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex CoA-dependent acyltransferases 32
P-loop containing nucleoside triphosphate hydrolases post-AAA+ oligomerization domain-like 32
CheY-like CheY-like 33
ACT-like ACT-like 33
HD-domain/PDEase-like ACT-like 32
ValRS/IleRS/LeuRS editing domain Nucleotidylyl transferase 32
Nucleotidyltransferase ACT-like 32
Nqo1 FMN-binding domain-like Nqo1C-terminal domain-like 33
Single hybrid motif Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex 32
gp5 N-terminal domain-like Phage fibre proteins 31
HMA, heavy metal-associated domain Calcium ATPase, transduction domain A 33
HMA, heavy metal-associated domain HAD-like 33
Phage tail proteins Phage tail proteins 31
Class II aaRS and biotin synthetases Class II aaRS ABD-related 33
Mechanosensitive channel protein MscS (YggB), transmembrane region Sm-like ribonucleoproteins 22
NAD(P)-binding Rossmann-fold domains ACT-like 22
Cation efflux protein transmembrane domain-like Cation efflux protein cytoplasmic domain-like 22
Mechanosensitive channel protein MscS (YggB), transmembrane region Mechanosensitive channel protein MscS (YggB), C-terminal domain 22
Putative DNA-binding domain Ribonuclease H-like 21
HCP-like HCP-like 21
Translation proteins SH3-like domain Nucleic acid-binding proteins 22
ThrRS/AlaRS common domain Class II aaRS and biotin synthetases 22
Heat shock protein 70kD (HSP70), peptide-binding domain Heat shock protein 70kD (HSP70), C-terminal subdomain 21
Sm-like ribonucleoproteins Mechanosensitive channel protein MscS (YggB), C-terminal domain 22
PK beta-barrel domain-like PK C-terminal domain-like 21
Nucleotidyltransferase Nucleotidyltransferase substrate binding subunit/domain 22
Cytochrome c oxidase subunit II-like, transmembrane region Cupredoxins 22
FAD/NAD(P)-binding domain HI0933 insert domain-like 21
FAD/NAD(P)-binding domain Aminomethyltransferase beta-barrel domain 21
Metal cation-transporting ATPase, ATP-binding domain N Calcium ATPase, transmembrane domain M 21
Phosphoglucomutase, first 3 domains Phosphoglucomutase, C-terminal domain 21
NAD(P)-binding Rossmann-fold domains Succinyl-CoA synthetase domains 22
Succinyl-CoA synthetase domains Glutathione synthetase ATP-binding domain-like 22
CoA-dependent acyltransferases ACP-like 22
Glutathione synthetase ATP-binding domain-like Phosphohistidine domain 22
LuxS/MPP-like metallohydrolase LuxS/MPP-like metallohydrolase 21
2Fe-2S ferredoxin-like Formate dehydrogenase/DMSO reductase, domains 1-3 22
HD-domain/PDEase-like TGS-like 21
Calcium ATPase, transduction domain A Metal cation-transporting ATPase, ATP-binding domain N 21
CheY-like Histidine-containing phosphotransfer domain, HPT domain 22
Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain Phosphohistidine domain 22
FliG FliG 21
Phosphoglucomutase, first 3 domains Phosphoglucomutase, first 3 domains 21
PreATP-grasp domain Single hybrid motif 22
PUA domain-like P-loop containing nucleoside triphosphate hydrolases 22
Ribosomal protein S5 domain 2-like Type II DNA topoisomerase 22
Actin-like ATPase domain Heat shock protein 70kD (HSP70), C-terminal subdomain 21
CBS-domain pair Nucleotide cyclase 22
Penicillin binding protein dimerisation domain beta-lactamase/transpeptidase-like 22
TGS-like ACT-like 21
6-phosphogluconate dehydrogenase C-terminal domain-like ClpP/crotonase 21
Sensory domain-like Homodimeric domain of signal transducing histidine kinase 22
Clc chloride channel CBS-domain pair 21
EspE N-terminal domain-like P-loop containing nucleoside triphosphate hydrolases 21
CoA-dependent acyltransferases Acetyl-CoA synthetase-like 22
FMN-linked oxidoreductases FAD/NAD(P)-binding domain 22
HCP-like Sec-C motif 21
Glutathione synthetase ATP-binding domain-like Single hybrid motif 22
Ribosomal protein S5 domain 2-like Ribonuclease PH domain 2-like 22
Actin-like ATPase domain Heat shock protein 70kD (HSP70), peptide-binding domain 21
NAD(P)-binding Rossmann-fold domains UDP-glucose/GDP-mannose dehydrogenase C-terminal domain 21
NagB/RpiA/CoA transferase-like NagB/RpiA/CoA transferase-like 22
EAL domain-like CBS-domain pair 22
DsbC/DsbG N-terminal domain-like Thioredoxin-like 21
HAMP domain-like Nucleotide cyclase 22
Cytochrome c C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase 22
Cupredoxins Cytochrome c 22
Chemotaxis receptor methyltransferase CheR, N-terminal domain S-adenosyl-L-methionine-dependent methyltransferases 21
Metal cation-transporting ATPase, ATP-binding domain N HAD-like 21
P-loop containing nucleoside triphosphate hydrolases FtsH protease domain-like 21
FAD/NAD(P)-binding domain Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain 22
4Fe-4S ferredoxins Formate dehydrogenase/DMSO reductase, domains 1-3 22
MurE/MurF N-terminal domain MurD-like peptide ligases, peptide-binding domain 21
CorA soluble domain-like Magnesium transport protein CorA, transmembrane region 21
Homodimeric domain of signal transducing histidine kinase CheW-like 21
EAL domain-like HD-domain/PDEase-like 21
Sensory domain-like Nucleotide cyclase 22
Phosphoenolpyruvate/pyruvate domain PK C-terminal domain-like 21
CheY-like Methylesterase CheB, C-terminal domain 22
Methylated DNA-protein cysteine methyltransferase domain Methylated DNA-protein cysteine methyltransferase, C-terminal domain 22
MurE/MurF N-terminal domain MurD-like peptide ligases, catalytic domain 21
Nucleotidyltransferase TGS-like 21
GreA transcript cleavage protein, N-terminal domain FKBP-like 21
Rudiment single hybrid motif Single hybrid motif 22
Putative DNA-binding domain mu transposase, C-terminal domain 21
Ribonuclease H-like mu transposase, C-terminal domain 21
2Fe-2S ferredoxin-like CO dehydrogenase ISP C-domain like 22
Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain 22
Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain Phosphoenolpyruvate/pyruvate domain 22
PUA domain-like Ribosomal protein S5 domain 2-like 22
L30e-like alpha/beta knot 21
Nicotinate/Quinolinate PRTase N-terminal domain-like Nicotinate/Quinolinate PRTase C-terminal domain-like 21
EAL domain-like Sensory domain-like 21
tRNA-binding arm Class II aaRS and biotin synthetases 21
PLP-dependent transferases PLP-dependent transferases 21
Trypsin-like serine proteases PDZ domain-like 22
Aspartate/glutamate racemase Aspartate/glutamate racemase 21
Lysozyme-like beta-lactamase/transpeptidase-like 22
NAD(P)-binding Rossmann-fold domains ClpP/crotonase 21
IlvD/EDD N-terminal domain-like LeuD/IlvD-like 21
Sensory domain-like ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 22
CBS-domain pair FAD-binding/transporter-associated domain-like 21
Regulatory protein AraC Homeodomain-like 21
FabD/lysophospholipase-like Probable ACP-binding domain of malonyl-CoA ACP transacylase 21
6-phosphogluconate dehydrogenase C-terminal domain-like 6-phosphogluconate dehydrogenase C-terminal domain-like 21
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase Type II DNA topoisomerase 22
Type II DNA topoisomerase GyrA/ParC C-terminal domain-like 21
Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain 22
Nitrite/Sulfite reductase N-terminal domain-like Nitrite and sulphite reductase 4Fe-4S domain-like 22
6-phosphogluconate dehydrogenase C-terminal domain-like UDP-glucose/GDP-mannose dehydrogenase C-terminal domain 21
PK beta-barrel domain-like Phosphoenolpyruvate/pyruvate domain 21
Nucleotidyltransferase Poly A polymerase C-terminal region-like 22
FAD/NAD(P)-binding domain Folate-binding domain 21
Succinyl-CoA synthetase domains Succinyl-CoA synthetase domains 11
Carbamoyl phosphate synthetase, large subunit connection domain Methylglyoxal synthase-like 11
Succinyl-CoA synthetase domains Acyl-CoA N-acyltransferases (Nat) 11
HAMP domain-like EAL domain-like 11
N-terminal domain of MutM-like DNA repair proteins S13-like H2TH domain 11
2,3-Bisphosphoglycerate-independent phosphoglycerate mutase, substrate-binding domain Alkaline phosphatase-like 11
Methionine synthase domain Methionine synthase activation domain-like 11
UROD/MetE-like UROD/MetE-like 11
Homeodomain-like Methylated DNA-protein cysteine methyltransferase domain 11
Cytidine deaminase-like Dihydrofolate reductase-like 11
Translation proteins "Winged helix" DNA-binding domain 11
Thiol:disulfide interchange protein DsbD, N-terminal domain (DsbD-alpha) Thioredoxin-like 11
MgtE N-terminal domain-like MgtE membrane domain-like 11
S-adenosyl-L-methionine-dependent methyltransferases FAD-linked reductases, C-terminal domain 11
YgfB-like Sec-C motif 11
FKBP-like FKBP-like 11
CBS-domain pair Inosine monophosphate dehydrogenase (IMPDH) 11
Composite domain of metallo-dependent hydrolases Composite domain of metallo-dependent hydrolases 11
Nucleic acid-binding proteins Prokaryotic type KH domain (KH-domain type II) 11
Nucleic acid-binding proteins ArfGap/RecO-like zinc finger 11
NagB/RpiA/CoA transferase-like D-ribose-5-phosphate isomerase (RpiA), lid domain 11
UBA-like Elongation factor Ts (EF-Ts), dimerisation domain 11
Acetyl-CoA synthetase-like alpha/beta-Hydrolases 11
CBS-domain pair MgtE membrane domain-like 11
CheY-like HD-domain/PDEase-like 11
2Fe-2S ferredoxin-like ADC-like 11
Homo-oligomeric flavin-containing Cys decarboxylases, HFCD CoaB-like 11
Aspartate carbamoyltransferase, Regulatory-chain, N-terminal domain Aspartate carbamoyltransferase, Regulatory-chain, C-terminal domain 11
PreATP-grasp domain Carbamoyl phosphate synthetase, large subunit connection domain 11
PheT/TilS domain Class II aaRS and biotin synthetases 11
Nucleotidylyl transferase Riboflavin kinase-like 11
NAD(P)-binding Rossmann-fold domains Isocitrate/Isopropylmalate dehydrogenase-like 11
Prokaryotic type I DNA topoisomerase Zinc beta-ribbon 11
CO dehydrogenase ISP C-domain like CO dehydrogenase flavoprotein C-terminal domain-like 11
DNA polymerase beta, N-terminal domain-like Nucleotidyltransferase 11
Chaperone J-domain DnaJ/Hsp40 cysteine-rich domain 11
"Winged helix" DNA-binding domain Class II aaRS and biotin synthetases 11
LysM domain LysM domain 11
Globin-like EAL domain-like 11
Nucleotidyltransferase substrate binding subunit/domain ACT-like 11
Ribosomal protein S5 domain 2-like DNA mismatch repair protein MutL 11
S-adenosylmethionine synthetase S-adenosylmethionine synthetase 11
4'-phosphopantetheinyl transferase 4'-phosphopantetheinyl transferase 11
Homeodomain-like Methylated DNA-protein cysteine methyltransferase, C-terminal domain 11
Quinohemoprotein amine dehydrogenase A chain, domain 3 E set domains 11
CO dehydrogenase ISP C-domain like FAD-binding/transporter-associated domain-like 11
Methionyl-tRNA synthetase (MetRS), Zn-domain Nucleic acid-binding proteins 11
NAD(P)-binding Rossmann-fold domains Siroheme synthase middle domains-like 11
"Winged helix" DNA-binding domain NagB/RpiA/CoA transferase-like 11
Nucleic acid-binding proteins GAD domain-like 11
Ribonuclease H-like Nucleic acid-binding proteins 11
Sec63 N-terminal domain-like PHP domain-like 11
PDZ domain-like ClpP/crotonase 11
NAD(P)-binding Rossmann-fold domains Glutathione synthetase ATP-binding domain-like 11
PurS-like FGAM synthase PurL, linker domain 11
Nucleic acid-binding proteins Putative DNA-binding domain 11
Class I glutamine amidotransferase-like Adenine nucleotide alpha hydrolases-like 11
ACP-like Trimeric LpxA-like enzymes 11
P-loop containing nucleoside triphosphate hydrolases Signal peptide-binding domain 11
PurS-like PurM N-terminal domain-like 11
Periplasmic binding protein-like II Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain 11
P-loop containing nucleoside triphosphate hydrolases HprK N-terminal domain-like 11
Rhodanese/Cell cycle control phosphatase P-loop containing nucleoside triphosphate hydrolases 11
Lysozyme-like LysM domain 11
FMN-linked oxidoreductases Nucleotide-binding domain 11
Homocysteine S-methyltransferase Dihydropteroate synthetase-like 11
Tex N-terminal region-like Nucleic acid-binding proteins 11
PHP14-like Phospholipase D/nuclease 11
RNase III domain-like dsRNA-binding domain-like 11
S-adenosyl-L-methionine-dependent methyltransferases Putative methyltransferase TM0872, insert domain 11
Peptidase/esterase 'gauge' domain alpha/beta-Hydrolases 11
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase HSP90 C-terminal domain 11
Nucleic acid-binding proteins S-adenosyl-L-methionine-dependent methyltransferases 11
MgtE N-terminal domain-like CBS-domain pair 11
CoA-dependent acyltransferases CoA-dependent acyltransferases 11
Rho N-terminal domain-like Nucleic acid-binding proteins 11
Riboflavin synthase domain-like Riboflavin synthase domain-like 11
Protein kinase-like (PK-like) GAF domain-like 11
Class I glutamine amidotransferase-like GMP synthetase C-terminal dimerisation domain 11
Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) ThrRS/AlaRS common domain 11
RuvA domain 2-like JAB1/MPN domain 11
FGAM synthase PurL, linker domain Class I glutamine amidotransferase-like 11
PreATP-grasp domain post-HMGL domain-like 11
Carbamate kinase-like PUA domain-like 11
DNA repair protein MutS, domain I DNA repair protein MutS, domain III 11
Dihydropteroate synthetase-like Methionine synthase domain 11
Class II aaRS and biotin synthetases C-terminal domain of transcriptional repressors 11
Eukaryotic type KH-domain (KH-domain type I) Nucleic acid-binding proteins 11
TPR-like P-loop containing nucleoside triphosphate hydrolases 11
MFS general substrate transporter Glycerol-3-phosphate (1)-acyltransferase 11
HMA, heavy metal-associated domain HMA, heavy metal-associated domain 11
DNA methylase specificity domain DNA methylase specificity domain 11
PIN domain-like Ribonuclease H-like 11
Ferritin-like HAD-like 11
TGS-like Class II aaRS ABD-related 11
Cobalamin (vitamin B12)-binding domain Methionine synthase activation domain-like 11
Molybdenum cofactor-binding domain Molybdenum cofactor-binding domain 11
Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain ACT-like 11
post-HMGL domain-like Single hybrid motif 11
P-loop containing nucleoside triphosphate hydrolases TRCF domain-like 11
PurM C-terminal domain-like Class I glutamine amidotransferase-like 11
S-adenosyl-L-methionine-dependent methyltransferases NAD(P)-binding Rossmann-fold domains 11
Phoshotransferase/anion transport protein Phosphoenolpyruvate/pyruvate domain 11
HPr-like Phosphohistidine domain 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) PRTase-like 11
Putative DNA-binding domain P-loop containing nucleoside triphosphate hydrolases 11
Phoshotransferase/anion transport protein HPr-like 11
P-loop containing nucleoside triphosphate hydrolases Prokaryotic type KH domain (KH-domain type II) 11
N-terminal domain of MutM-like DNA repair proteins Glucocorticoid receptor-like (DNA-binding domain) 11
P-loop containing nucleoside triphosphate hydrolases C-terminal effector domain of the bipartite response regulators 11
GroEL-intermediate domain like GroEL apical domain-like 11
Alpha-L RNA-binding motif S-adenosyl-L-methionine-dependent methyltransferases 11
P-loop containing nucleoside triphosphate hydrolases RecA protein, C-terminal domain 11
PTS system IIB component-like PTS system IIB component-like 11
Rhodanese/Cell cycle control phosphatase Rhodanese/Cell cycle control phosphatase 11
P-loop containing nucleoside triphosphate hydrolases CarD-like 11
Nucleotidyltransferase PHP domain-like 11
Glutathione synthetase ATP-binding domain-like Phosphoenolpyruvate/pyruvate domain 11
HprK N-terminal domain-like PEP carboxykinase-like 11
Nucleotide-diphospho-sugar transferases RmlC-like cupins 11
Putative DNA-binding domain Translation proteins 11
Globin-like GAF domain-like 11
HAMP domain-like GAF domain-like 11
Thioredoxin-like Nqo1 FMN-binding domain-like 11
Carbon-nitrogen hydrolase Adenine nucleotide alpha hydrolases-like 11
Ribosomal protein S5 domain 2-like Eukaryotic type KH-domain (KH-domain type I) 11
CO dehydrogenase molybdoprotein N-domain-like Molybdenum cofactor-binding domain 11
Heme-dependent peroxidases Heme-dependent peroxidases 11
DNA repair protein MutS, domain II P-loop containing nucleoside triphosphate hydrolases 11
NAD(P)-binding Rossmann-fold domains 1-deoxy-D-xylulose-5-phosphate reductoisomerase, C-terminal domain 11
Nucleotidyltransferase substrate binding subunit/domain Nucleotidyltransferase substrate binding subunit/domain 11
P-loop containing nucleoside triphosphate hydrolases C-terminal UvrC-binding domain of UvrB 11
Nitrous oxide reductase, N-terminal domain Cupredoxins 11
Tryptophan synthase beta subunit-like PLP-dependent enzymes CBS-domain pair 11
HD-domain/PDEase-like ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 11
CheY-like TPR-like 11
Zinc beta-ribbon Zinc beta-ribbon 11
Carbamate kinase-like Acyl-CoA N-acyltransferases (Nat) 11
Nudix Nudix 11
PheT/TilS domain Anticodon-binding domain of PheRS 11
N-terminal domain of DnaB helicase P-loop containing nucleoside triphosphate hydrolases 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) Adenine nucleotide alpha hydrolases-like 11
Glutathione synthetase ATP-binding domain-like Carbamoyl phosphate synthetase, large subunit connection domain 11
Cytochrome c oxidase subunit II-like, transmembrane region Cytochrome c 11
Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) Translation proteins 11
Trigger factor ribosome-binding domain Triger factor/SurA peptide-binding domain-like 11
GAF domain-like GAF domain-like 11
Periplasmic binding protein-like II ACT-like 11
Class II aaRS and biotin synthetases Translation proteins 11
Single hybrid motif Single hybrid motif 11
HSP40/DnaJ peptide-binding domain HSP40/DnaJ peptide-binding domain 11
P-loop containing nucleoside triphosphate hydrolases TGS-like 11
TolB, N-terminal domain Tricorn protease N-terminal domain 11
GAF domain-like ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 11
HPr-like Phosphoenolpyruvate/pyruvate domain 11
RuvA domain 2-like BRCT domain 11
4Fe-4S ferredoxins Iron-sulfur subunit of formate dehydrogenase N, transmembrane anchor 11
Sensory domain-like HAMP domain-like 11
Chorismate mutase II Periplasmic binding protein-like II 11
Adenine nucleotide alpha hydrolases-like GMP synthetase C-terminal dimerisation domain 11
FMN-binding split barrel UbiD C-terminal domain-like 11
Zinc beta-ribbon DNA primase DnaG, C-terminal domain 11
Homocysteine S-methyltransferase Methionine synthase activation domain-like 11
Phoshotransferase/anion transport protein Phosphohistidine domain 11
Aldolase 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain 11
Methionine synthase domain Cobalamin (vitamin B12)-binding domain 11
Acetyl-CoA synthetase-like Glycerol-3-phosphate (1)-acyltransferase 11
YajQ-like YajQ-like 11
Thioredoxin-like Nqo1 middle domain-like 11
Glutamyl tRNA-reductase catalytic, N-terminal domain NAD(P)-binding Rossmann-fold domains 11
MFS general substrate transporter MFS general substrate transporter 11
CRISPR-associated protein CRISPR-associated protein 11
P-loop containing nucleoside triphosphate hydrolases Helical scaffold and wing domains of SecA 11
Dihydropteroate synthetase-like Cobalamin (vitamin B12)-binding domain 11
TGS-like ThrRS/AlaRS common domain 11
5' to 3' exonuclease, C-terminal subdomain Ribonuclease H-like 11
Nucleic acid-binding proteins BRCT domain 11
PreATP-grasp domain Methylglyoxal synthase-like 11
Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 11
Tryptophan synthase beta subunit-like PLP-dependent enzymes ACT-like 11
Voltage-gated potassium channels NAD(P)-binding Rossmann-fold domains 11
Ribosome binding protein Y (YfiA homologue) Nucleic acid-binding proteins 11
Cryptochrome/photolyase, N-terminal domain Cryptochrome/photolyase FAD-binding domain 11
E set domains E set domains 11
Rho N-terminal domain-like P-loop containing nucleoside triphosphate hydrolases 11
RBP11-like subunits of RNA polymerase C-terminal domain of RNA polymerase alpha subunit 11
Ribonuclease PH domain 2-like Nucleic acid-binding proteins 11
GroEL equatorial domain-like GroEL apical domain-like 11
Class II aaRS and biotin synthetases Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) 11
TK C-terminal domain-like Pyruvate-ferredoxin oxidoreductase, PFOR, domain III 11
N-terminal domain of bifunctional PutA protein ALDH-like 11
CoA-dependent acyltransferases alpha/beta-Hydrolases 11
Prokaryotic type KH domain (KH-domain type II) Prokaryotic type KH domain (KH-domain type II) 11
Prokaryotic type KH domain (KH-domain type II) Ribosomal protein S3 C-terminal domain 11
P-loop containing nucleoside triphosphate hydrolases Initiation factor IF2/eIF5b, domain 3 11
Phoshotransferase/anion transport protein Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain 11
Bacterial muramidases Lysozyme-like 11
Transcription factor NusA, N-terminal domain Prokaryotic type KH domain (KH-domain type II) 11
Carboxypeptidase regulatory domain-like (Trans)glycosidases 11
PIN domain-like P-loop containing nucleoside triphosphate hydrolases 11
Ribosomal protein L7/12, oligomerisation (N-terminal) domain ClpS-like 11
2Fe-2S ferredoxin-like FAD-binding/transporter-associated domain-like 11
PurS-like Class I glutamine amidotransferase-like 11
Urease metallochaperone UreE, N-terminal domain Urease metallochaperone UreE, C-terminal domain 11
Coiled-coil domain of nucleotide exchange factor GrpE Head domain of nucleotide exchange factor GrpE 11
HPr-like Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain 11
Glutamine synthetase/guanido kinase GatB/YqeY motif 11
ParB/Sulfiredoxin KorB DNA-binding domain-like 11
PIN domain-like 5' to 3' exonuclease, C-terminal subdomain 11
Nucleic acid-binding proteins PheT/TilS domain 11
Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases Nucleic acid-binding proteins 11
Globin-like Riboflavin synthase domain-like 11
Rudiment single hybrid motif Aldolase 11
Ribosomal protein S5 domain 2-like Nucleic acid-binding proteins 11
Fe,Mn superoxide dismutase (SOD), N-terminal domain Fe,Mn superoxide dismutase (SOD), C-terminal domain 11
Methylglyoxal synthase-like Cytidine deaminase-like 11
Adenine nucleotide alpha hydrolases-like Argininosuccinate synthetase, C-terminal domain 11
EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain "Winged helix" DNA-binding domain 11
Glutathione synthetase ATP-binding domain-like post-HMGL domain-like 11
Ribonuclease H-like RuvA domain 2-like 11
DNA clamp DNA clamp 11
Carbamoyl phosphate synthetase, small subunit N-terminal domain Class I glutamine amidotransferase-like 11
CBS-domain pair PYP-like sensor domain (PAS domain) 11
Epsilon subunit of F1F0-ATP synthase N-terminal domain Epsilon subunit of F1F0-ATP synthase C-terminal domain 11
N-utilization substance G protein NusG, N-terminal domain Translation proteins SH3-like domain 11
Putative DNA-binding domain Initiation factor IF2/eIF5b, domain 3 11
Carbamate kinase-like ACT-like 11
Translation proteins Initiation factor IF2/eIF5b, domain 3 11
GroES-like GroES-like 11
dsRNA-binding domain-like Ribosomal protein S5 domain 2-like 11
PreATP-grasp domain PreATP-grasp domain 11
PurM C-terminal domain-like PurM C-terminal domain-like 11
Xylose isomerase-like Ribokinase-like 11
Nucleotidylyl transferase tRNA-binding arm 11
FMN-linked oxidoreductases Alpha subunit of glutamate synthase, C-terminal domain 11
Metallo-hydrolase/oxidoreductase Flavoproteins 11
Glutathione synthetase ATP-binding domain-like Aldolase 11
Ferritin-like Calcium ATPase, transmembrane domain M 11
Xylose isomerase-like Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 11
HAMP domain-like CheY-like 11
DNA ligase/mRNA capping enzyme, catalytic domain BRCT domain 11
GAF domain-like Homeodomain-like 11
Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 1-deoxy-D-xylulose-5-phosphate reductoisomerase, C-terminal domain 11
S-adenosyl-L-methionine-dependent methyltransferases FAD/NAD(P)-binding domain 11
FAD/NAD(P)-binding domain Nitrite/Sulfite reductase N-terminal domain-like 11
alpha-helical ferredoxin Nucleotide-binding domain 11
FGAM synthase PurL, linker domain PurM N-terminal domain-like 11
LysM domain Duplicated hybrid motif 11
P-loop containing nucleoside triphosphate hydrolases Isocitrate/Isopropylmalate dehydrogenase-like 11
RuvA domain 2-like RuvA domain 2-like 11
ThrRS/AlaRS common domain Class II aaRS ABD-related 11
Barwin-like endoglucanases Sporulation related repeat 11
Aldolase Single hybrid motif 11
DnaJ/Hsp40 cysteine-rich domain HSP40/DnaJ peptide-binding domain 11
S13-like H2TH domain Glucocorticoid receptor-like (DNA-binding domain) 11
4Fe-4S ferredoxins ADC-like 11
Nucleotide-diphospho-sugar transferases Nucleotide-diphospho-sugar transferases 11
Adenine nucleotide alpha hydrolases-like PheT/TilS domain 11
Ribosomal protein S5 domain 2-like HSP90 C-terminal domain 11
Aldolase post-HMGL domain-like 11
PheT/TilS domain Putative DNA-binding domain 11
PP2C-like Protein kinase-like (PK-like) 11
Tubulin nucleotide-binding domain-like Tubulin C-terminal domain-like 11
MoeA N-terminal region -like MoeA C-terminal domain-like 11
Prokaryotic type KH domain (KH-domain type II) Rad51 N-terminal domain-like 11
Tex N-terminal region-like Ribonuclease H-like 11
PYP-like sensor domain (PAS domain) Histidine-containing phosphotransfer domain, HPT domain 11
Pseudouridine synthase PUA domain-like 11
NAD(P)-binding Rossmann-fold domains Glutamyl tRNA-reductase dimerization domain 11
DNA-glycosylase Nudix 11
Ada DNA repair protein, N-terminal domain (N-Ada 10) Methylated DNA-protein cysteine methyltransferase domain 11
Translation initiation factor IF3, N-terminal domain Translation initiation factor IF3, C-terminal domain 11
Class II aaRS and biotin synthetases GAD domain-like 11
Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain Nucleotidylyl transferase 11
Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain Pyrimidine nucleoside phosphorylase C-terminal domain 11
ClpP/crotonase NfeD domain-like 11
Ada DNA repair protein, N-terminal domain (N-Ada 10) Methylated DNA-protein cysteine methyltransferase, C-terminal domain 11
S-adenosyl-L-methionine-dependent methyltransferases TPR-like 11
Nucleotidylyl transferase Alpha-L RNA-binding motif 11
UDP-Glycosyltransferase/glycogen phosphorylase Nucleotide-diphospho-sugar transferases 11
YjeF N-terminal domain-like Ribokinase-like 11
GIY-YIG endonuclease C-terminal UvrC-binding domain of UvrB 11
Transcription factor NusA, N-terminal domain Rad51 N-terminal domain-like 11
"Winged helix" DNA-binding domain MOP-like 11
C-terminal UvrC-binding domain of UvrB RuvA domain 2-like 11
Aminoacid dehydrogenase-like, N-terminal domain Isocitrate/Isopropylmalate dehydrogenase-like 11
Homeodomain-like SIS domain 11
NAD(P)-binding Rossmann-fold domains LDH C-terminal domain-like 11
Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 11
CheY-like GAF domain-like 11
Translation proteins PRC-barrel domain 11
GAF domain-like P-loop containing nucleoside triphosphate hydrolases 11
YhbC-like, N-terminal domain YhbC-like, C-terminal domain 11
P-loop containing nucleoside triphosphate hydrolases PGBD-like 11
Ferritin-like Calcium ATPase, transduction domain A 11
DNA repair protein MutS, domain III P-loop containing nucleoside triphosphate hydrolases 11
Molybdenum cofactor biosynthesis proteins MoeA C-terminal domain-like 11
Nitrite and sulphite reductase 4Fe-4S domain-like Nitrite and sulphite reductase 4Fe-4S domain-like 11
HprK N-terminal domain-like Isocitrate/Isopropylmalate dehydrogenase-like 11
Ada DNA repair protein, N-terminal domain (N-Ada 10) Homeodomain-like 11
NAD(P)-binding Rossmann-fold domains Tetrapyrrole methylase 11
Aconitase B, N-terminal domain LeuD/IlvD-like 11
YbaK/ProRS associated domain Class II aaRS ABD-related 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) Alpha subunit of glutamate synthase, C-terminal domain 11
PYP-like sensor domain (PAS domain) Ribonuclease H-like 11
PRTase-like PRTase-like 11
DNA ligase/mRNA capping enzyme, catalytic domain RuvA domain 2-like 11
Nucleic acid-binding proteins Anticodon-binding domain of PheRS 11
PPK N-terminal domain-like Phospholipase D/nuclease 11
Glutathione synthetase ATP-binding domain-like Acyl-CoA N-acyltransferases (Nat) 11
beta-lactamase/transpeptidase-like Penicillin-binding protein associated domain 11
Nucleotide-diphospho-sugar transferases Trimeric LpxA-like enzymes 11
Oxidoreductase molybdopterin-binding domain E set domains 11
Trimeric LpxA-like enzymes Trimeric LpxA-like enzymes 11
FAD-binding/transporter-associated domain-like Uridine diphospho-N-Acetylenolpyruvylglucosamine reductase, MurB, C-terminal domain 11
Homocysteine S-methyltransferase Cobalamin (vitamin B12)-binding domain 11
P-loop containing nucleoside triphosphate hydrolases Pre-protein crosslinking domain of SecA 11
Sensory domain-like Sensory domain-like 11
PYP-like sensor domain (PAS domain) Homeodomain-like 11
Flavoproteins Ferredoxin reductase-like, C-terminal NADP-linked domain 11
TGS-like Class II aaRS and biotin synthetases 11
Protein kinase-like (PK-like) HD-domain/PDEase-like 11
MoeA N-terminal region -like Molybdenum cofactor biosynthesis proteins 11
Transcription factor NusA, N-terminal domain Nucleic acid-binding proteins 11
Ribosomal protein L6 Ribosomal protein L6 11
FGAM synthase PurL, linker domain PurM C-terminal domain-like 11
Methionyl-tRNA synthetase (MetRS), Zn-domain Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 11
"Winged helix" DNA-binding domain C-terminal domain of transcriptional repressors 11
Transmembrane di-heme cytochromes CBD9-like 11
Aldolase AFP III-like domain 11
ACP-like Glycerol-3-phosphate (1)-acyltransferase 11
Fe-S cluster assembly (FSCA) domain-like P-loop containing nucleoside triphosphate hydrolases 11
Metalloproteases ("zincins"), catalytic domain PDZ domain-like 11
2Fe-2S ferredoxin-like CO dehydrogenase flavoprotein C-terminal domain-like 11
Ribosomal protein S5 domain 2-like GHMP Kinase, C-terminal domain 11
NAD(P)-binding Rossmann-fold domains TrkA C-terminal domain-like 11
Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain Pyrimidine nucleoside phosphorylase C-terminal domain 11
PurM N-terminal domain-like Class I glutamine amidotransferase-like 11
Tetrahydrobiopterin biosynthesis enzymes-like Tetrahydrobiopterin biosynthesis enzymes-like 11
(Trans)glycosidases Glycosyl hydrolase domain 11
Zinc beta-ribbon DNA primase core 11
Galactose-binding domain-like Galactose-binding domain-like 11
DNA/RNA polymerases Lesion bypass DNA polymerase (Y-family), little finger domain 11
NagB/RpiA/CoA transferase-like 4Fe-4S ferredoxins 11
PLP-binding barrel Arginase/deacetylase 11
Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases tRNA-binding arm 11
PHP domain-like P-loop containing nucleoside triphosphate hydrolases 11
CBS-domain pair CBS-domain pair 11
DNA repair protein MutS, domain I P-loop containing nucleoside triphosphate hydrolases 11
MesJ substrate recognition domain-like PheT/TilS domain 11
Glucocorticoid receptor-like (DNA-binding domain) P-loop containing nucleoside triphosphate hydrolases 11
GIY-YIG endonuclease RuvA domain 2-like 11
Chaperone J-domain HSC20 (HSCB), C-terminal oligomerisation domain 11
Thiamin diphosphate-binding fold (THDP-binding) Pyruvate-ferredoxin oxidoreductase, PFOR, domain III 11
P-loop containing nucleoside triphosphate hydrolases HRDC-like 11
Class II aaRS and biotin synthetases Anticodon-binding domain of PheRS 11
Flavoproteins Rubredoxin-like 11
Chorismate mutase II ACT-like 11
Insert subdomain of RNA polymerase alpha subunit RBP11-like subunits of RNA polymerase 11
Adenine nucleotide alpha hydrolases-like MesJ substrate recognition domain-like 11
Methionyl-tRNA synthetase (MetRS), Zn-domain Nucleotidylyl transferase 11
Hsp33 domain HSP33 redox switch-like 11
Obg GTP-binding protein N-terminal domain P-loop containing nucleoside triphosphate hydrolases 11
Nitrite/Sulfite reductase N-terminal domain-like Nitrite/Sulfite reductase N-terminal domain-like 11
Nucleic acid-binding proteins Rad51 N-terminal domain-like 11
NusB-like S-adenosyl-L-methionine-dependent methyltransferases 11
PPK N-terminal domain-like PHP14-like 11
PreATP-grasp domain Aldolase 11
ClpP/crotonase ClpP/crotonase 11
Nucleic acid-binding proteins DNA helicase RuvA subunit, C-terminal domain 11
Globin-like Ferredoxin reductase-like, C-terminal NADP-linked domain 11
Pre-protein crosslinking domain of SecA Helical scaffold and wing domains of SecA 11
N-terminal domain of bifunctional PutA protein FAD-linked oxidoreductase 11
PUA domain-like alpha/beta knot 11
FAD-binding/transporter-associated domain-like CO dehydrogenase flavoprotein C-terminal domain-like 11
Flavoproteins Riboflavin synthase domain-like 11
Glutathione synthetase ATP-binding domain-like Methylglyoxal synthase-like 11
MOSC N-terminal domain-like PK beta-barrel domain-like 11
Rad51 N-terminal domain-like Rad51 N-terminal domain-like 11
Ribonuclease PH domain 2-like Eukaryotic type KH-domain (KH-domain type I) 11
P-loop containing nucleoside triphosphate hydrolases Smc hinge domain 11
CarD-like TRCF domain-like 11
Cytochrome c Quinohemoprotein amine dehydrogenase A chain, domain 3 11
R1 subunit of ribonucleotide reductase, N-terminal domain PFL-like glycyl radical enzymes 11
ACP-like alpha/beta-Hydrolases 11
RuvA domain 2-like MCP/YpsA-like 11
Domain of the SRP/SRP receptor G-proteins P-loop containing nucleoside triphosphate hydrolases 11
P-loop containing nucleoside triphosphate hydrolases PRTase-like 11
Nucleotidyltransferase Nucleotidyltransferase 11
P-loop containing nucleoside triphosphate hydrolases vWA-like 11
Chelatase Precorrin-8X methylmutase CbiC/CobH 11
FAD/NAD(P)-binding domain Nitrite and sulphite reductase 4Fe-4S domain-like 11
Single hybrid motif FAD/NAD(P)-binding domain 11
Thioredoxin-like Nqo1C-terminal domain-like 11
DNA repair protein MutS, domain II DNA repair protein MutS, domain III 11
Putative DNA-binding domain Class II aaRS and biotin synthetases 11
Leukotriene A4 hydrolase N-terminal domain Metalloproteases ("zincins"), catalytic domain 11
Tex N-terminal region-like RuvA domain 2-like 11
Single hybrid motif FAD/NAD-linked reductases, dimerisation (C-terminal) domain 11
vWA-like Tricorn protease domain 2 11
Actin-like ATPase domain HD-domain/PDEase-like 11
YrdC/RibB RibA-like 11
2Fe-2S ferredoxin-like alpha-helical ferredoxin 11
Glutamyl tRNA-reductase catalytic, N-terminal domain Glutamyl tRNA-reductase dimerization domain 11
Glutathione synthetase ATP-binding domain-like Glutathione synthetase ATP-binding domain-like 11
DNA polymerase beta, N-terminal domain-like PHP domain-like 11
Homocysteine S-methyltransferase Methionine synthase domain 11
Nudix Thiamin phosphate synthase 11
DNA repair protein MutS, domain I DNA repair protein MutS, domain II 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) FMN-linked oxidoreductases 11
Translation proteins Translation proteins 11
Nucleotide-binding domain FAD/NAD(P)-binding domain 11
Chaperone J-domain HSP40/DnaJ peptide-binding domain 11
Acyl-CoA N-acyltransferases (Nat) N-acetylmuramoyl-L-alanine amidase-like 11
cAMP-binding domain-like CBS-domain pair 11
Ribonuclease H-like GIY-YIG endonuclease 11
Insert subdomain of RNA polymerase alpha subunit C-terminal domain of RNA polymerase alpha subunit 11
Elongation factor Ts (EF-Ts), dimerisation domain Elongation factor Ts (EF-Ts), dimerisation domain 11
Nucleotidyltransferase substrate binding subunit/domain HD-domain/PDEase-like 11
Siroheme synthase middle domains-like Tetrapyrrole methylase 11
DNA polymerase beta, N-terminal domain-like Sec63 N-terminal domain-like 11
DnaK suppressor protein DksA, alpha-hairpin domain Glucocorticoid receptor-like (DNA-binding domain) 11
PurS-like PurM C-terminal domain-like 11
LigB-like LigA subunit of an aromatic-ring-opening dioxygenase LigAB 11
Nucleotidylyl transferase Nucleic acid-binding proteins 11
Rudiment single hybrid motif post-HMGL domain-like 11
Class II aaRS and biotin synthetases YbaK/ProRS associated domain 11
lambda integrase-like, N-terminal domain DNA breaking-rejoining enzymes 11
Aconitase B, N-terminal domain Aconitase iron-sulfur domain 11
Metallo-hydrolase/oxidoreductase Rubredoxin-like 11
Ribonuclease H-like DNA/RNA polymerases 11
Macro domain-like Zn-dependent exopeptidases 11
Cupredoxins Cupredoxins 11
4Fe-4S ferredoxins Respiratory nitrate reductase 1 gamma chain 11
PIN domain-like DNA/RNA polymerases 11
DNA ligase/mRNA capping enzyme, catalytic domain Nucleic acid-binding proteins 11
Transmembrane di-heme cytochromes a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) 11
PurM N-terminal domain-like PurM N-terminal domain-like 11
Ribosomal L11/L12e N-terminal domain Ribosomal protein L11, C-terminal domain 11
Globin-like Nucleotide cyclase 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) SIS domain 11
5' to 3' exonuclease, C-terminal subdomain DNA/RNA polymerases 11
Nucleotidylyl transferase An anticodon-binding domain of class I aminoacyl-tRNA synthetases 11
CheC-like Surface presentation of antigens (SPOA) 11
GroEL equatorial domain-like GroEL-intermediate domain like 11
Putative DNA-binding domain Anticodon-binding domain of PheRS 11
Adenine nucleotide alpha hydrolases-like Adenine nucleotide alpha hydrolases-like 11
Trigger factor ribosome-binding domain FKBP-like 11
L9 N-domain-like Ribosomal protein L9 C-domain 11
FAD-linked oxidoreductase ALDH-like 11
PLP-dependent transferases Ornithine decarboxylase C-terminal domain 11
JAB1/MPN domain Cysteine proteinases 11
HD-domain/PDEase-like GAF domain-like 11
ValRS/IleRS/LeuRS editing domain tRNA-binding arm 11
NAD(P)-binding Rossmann-fold domains Acyl-CoA N-acyltransferases (Nat) 11
UDP-Glycosyltransferase/glycogen phosphorylase UDP-Glycosyltransferase/glycogen phosphorylase 11
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase DNA mismatch repair protein MutL 11
PH0987 N-terminal domain-like Cyclophilin-like 11
DNA primase core DNA primase DnaG, C-terminal domain 11
P-loop containing nucleoside triphosphate hydrolases TrpR-like 11
RuvA domain 2-like DNA helicase RuvA subunit, C-terminal domain 11
Sec63 N-terminal domain-like Nucleotidyltransferase 11
Formate/glycerate dehydrogenase catalytic domain-like ACT-like 11
Ribonuclease PH domain 2-like Ribonuclease PH domain 2-like 11
Formyltransferase FMT C-terminal domain-like 11
Nucleotidylyl transferase Ribosomal protein L25-like 11
Dihydropteroate synthetase-like Methionine synthase activation domain-like 11
Cytochrome c E set domains 11
MOP-like MOP-like 11

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