SUPERFAMILY 1.75 HMM library and genome assignments server

Domain combination pairs in Novosphingobium sp. PP1Y

All pairs of domain combinations at the superfamily level are listed here.
The identification of domain pairs does not account for the possibility of non-contiguous domains. Inserted, or interlaced, domains are seen as having a simple pair ordering.

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Adjacent domain pairs graph

Graph of adjacent domain pairs.


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Domain combination pairs

666 domain combination pairs.
Click on a column heading to sort that column, or the 'View' button to see domain architetures for that domain pair combination.

Superfamily (N) Superfamily (C) Number of occurrances Number unique
ISP domain Bet v1-like 384
"Winged helix" DNA-binding domain Periplasmic binding protein-like II 312
P-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases 2816
Acyl-CoA dehydrogenase NM domain-like Acyl-CoA dehydrogenase C-terminal domain-like 274
Homodimeric domain of signal transducing histidine kinase ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 2512
NAD(P)-binding Rossmann-fold domains 6-phosphogluconate dehydrogenase C-terminal domain-like 214
Thioredoxin-like GST C-terminal domain-like 212
GroES-like NAD(P)-binding Rossmann-fold domains 202
Composite domain of metallo-dependent hydrolases Metallo-dependent hydrolases 208
Sigma2 domain of RNA polymerase sigma factors Sigma3 and sigma4 domains of RNA polymerase sigma factors 194
Homeodomain-like Tetracyclin repressor-like, C-terminal domain 182
NAD(P)-binding Rossmann-fold domains Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 164
CheY-like C-terminal effector domain of the bipartite response regulators 163
lambda repressor-like DNA-binding domains Periplasmic binding protein-like I 142
PYP-like sensor domain (PAS domain) ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 1411
Thiolase-like Thiolase-like 141
"Winged helix" DNA-binding domain Dimeric alpha+beta barrel 132
Multidrug resistance efflux transporter EmrE Multidrug resistance efflux transporter EmrE 122
FAD/NAD(P)-binding domain FAD-linked reductases, C-terminal domain 113
Nucleotide cyclase EAL domain-like 117
Actin-like ATPase domain Actin-like ATPase domain 114
Aminoacid dehydrogenase-like, N-terminal domain NAD(P)-binding Rossmann-fold domains 103
"Winged helix" DNA-binding domain GntR ligand-binding domain-like 101
FAD/NAD(P)-binding domain Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain 104
PYP-like sensor domain (PAS domain) Homodimeric domain of signal transducing histidine kinase 107
PYP-like sensor domain (PAS domain) Nucleotide cyclase 96
PreATP-grasp domain Glutathione synthetase ATP-binding domain-like 95
Thiamin diphosphate-binding fold (THDP-binding) TK C-terminal domain-like 95
FAD-binding/transporter-associated domain-like FAD-linked oxidases, C-terminal domain 92
CheY-like ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 98
(Trans)glycosidases Glycosyl hydrolase domain 85
ParB/Sulfiredoxin KorB DNA-binding domain-like 81
Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains 85
HAD-like Calcium ATPase, transmembrane domain M 86
lambda integrase-like, N-terminal domain DNA breaking-rejoining enzymes 82
Formate/glycerate dehydrogenase catalytic domain-like NAD(P)-binding Rossmann-fold domains 83
P-loop containing nucleoside triphosphate hydrolases Homeodomain-like 83
Calcium ATPase, transduction domain A HAD-like 86
Calcium ATPase, transduction domain A Calcium ATPase, transmembrane domain M 86
Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains Multidrug efflux transporter AcrB transmembrane domain 85
Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains 85
Multidrug efflux transporter AcrB transmembrane domain Multidrug efflux transporter AcrB transmembrane domain 85
"Winged helix" DNA-binding domain GAF domain-like 81
Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) 84
Zn-dependent exopeptidases Bacterial exopeptidase dimerisation domain 81
Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains 85
Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains Multidrug efflux transporter AcrB transmembrane domain 85
FAD/NAD(P)-binding domain FAD/NAD-linked reductases, dimerisation (C-terminal) domain 71
P-loop containing nucleoside triphosphate hydrolases Translation proteins 76
CheY-like PYP-like sensor domain (PAS domain) 76
ABC transporter transmembrane region P-loop containing nucleoside triphosphate hydrolases 62
PreATP-grasp domain Rudiment single hybrid motif 63
Thioesterase/thiol ester dehydrase-isomerase Thioesterase/thiol ester dehydrase-isomerase 61
(Trans)glycosidases Beta-D-glucan exohydrolase, C-terminal domain 64
Phosphohistidine domain Phosphoenolpyruvate/pyruvate domain 65
Creatinase/prolidase N-terminal domain Creatinase/aminopeptidase 62
Homodimeric domain of signal transducing histidine kinase CheY-like 65
Glutathione synthetase ATP-binding domain-like Rudiment single hybrid motif 63
PLP-binding barrel Alanine racemase C-terminal domain-like 62
Nucleotidylyl transferase Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 65
MurD-like peptide ligases, catalytic domain MurD-like peptide ligases, peptide-binding domain 64
Sm-like ribonucleoproteins Mechanosensitive channel protein MscS (YggB), C-terminal domain 63
CheY-like P-loop containing nucleoside triphosphate hydrolases 63
Mechanosensitive channel protein MscS (YggB), transmembrane region Sm-like ribonucleoproteins 52
Mechanosensitive channel protein MscS (YggB), transmembrane region Mechanosensitive channel protein MscS (YggB), C-terminal domain 52
Phosphoglucomutase, first 3 domains Phosphoglucomutase, C-terminal domain 52
HAMP domain-like ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 52
PYP-like sensor domain (PAS domain) PYP-like sensor domain (PAS domain) 54
HAMP domain-like Homodimeric domain of signal transducing histidine kinase 52
"Winged helix" DNA-binding domain PLP-dependent transferases 52
cAMP-binding domain-like "Winged helix" DNA-binding domain 51
PYP-like sensor domain (PAS domain) EAL domain-like 54
CheY-like Homeodomain-like 52
N-terminal nucleophile aminohydrolases (Ntn hydrolases) Adenine nucleotide alpha hydrolases-like 51
2Fe-2S ferredoxin-like CO dehydrogenase ISP C-domain like 51
Homeodomain-like Homeodomain-like 53
Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex CoA-dependent acyltransferases 53
Phosphoglucomutase, first 3 domains Phosphoglucomutase, first 3 domains 52
Ribosomal protein S5 domain 2-like P-loop containing nucleoside triphosphate hydrolases 54
Aldolase post-HMGL domain-like 52
Nucleic acid-binding proteins Nucleic acid-binding proteins 54
P-loop containing nucleoside triphosphate hydrolases EF-G C-terminal domain-like 54
HlyD-like secretion proteins HlyD-like secretion proteins 42
Succinyl-CoA synthetase domains Glutathione synthetase ATP-binding domain-like 42
Phospholipase D/nuclease Phospholipase D/nuclease 43
PurM N-terminal domain-like PurM C-terminal domain-like 42
IlvD/EDD N-terminal domain-like LeuD/IlvD-like 41
HMA, heavy metal-associated domain Calcium ATPase, transduction domain A 43
EF-G C-terminal domain-like EF-G C-terminal domain-like 43
P-loop containing nucleoside triphosphate hydrolases C-terminal domain of alpha and beta subunits of F1 ATP synthase 41
HMA, heavy metal-associated domain HAD-like 43
Glutathione synthetase ATP-binding domain-like Phosphoenolpyruvate/pyruvate domain 43
S-adenosyl-L-methionine-dependent methyltransferases P-loop containing nucleoside triphosphate hydrolases 42
HMA, heavy metal-associated domain Calcium ATPase, transmembrane domain M 43
Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 41
Translation proteins EF-G C-terminal domain-like 43
Thiamin diphosphate-binding fold (THDP-binding) DHS-like NAD/FAD-binding domain 41
N-terminal domain of alpha and beta subunits of F1 ATP synthase P-loop containing nucleoside triphosphate hydrolases 41
Single hybrid motif Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex 42
Quinoprotein alcohol dehydrogenase-like Cytochrome c 42
Nucleotidyltransferase Nucleotidyltransferase substrate binding subunit/domain 43
Glutathione synthetase ATP-binding domain-like Phosphohistidine domain 43
NAD(P)-binding Rossmann-fold domains Succinyl-CoA synthetase domains 42
Single hybrid motif CoA-dependent acyltransferases 42
DPP6 N-terminal domain-like alpha/beta-Hydrolases 42
N-terminal domain of alpha and beta subunits of F1 ATP synthase C-terminal domain of alpha and beta subunits of F1 ATP synthase 41
Succinyl-CoA synthetase domains Succinyl-CoA synthetase domains 31
P-loop containing nucleoside triphosphate hydrolases FtsH protease domain-like 32
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase Ribosomal protein S5 domain 2-like 33
Diaminopimelate epimerase-like Diaminopimelate epimerase-like 31
PreATP-grasp domain Single hybrid motif 32
6-phosphogluconate dehydrogenase C-terminal domain-like 6-phosphogluconate dehydrogenase C-terminal domain-like 32
MurCD N-terminal domain MurD-like peptide ligases, peptide-binding domain 32
GAF domain-like ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 33
NAD(P)-binding Rossmann-fold domains Glutathione synthetase ATP-binding domain-like 31
TPR-like TPR-like 33
ClpP/crotonase ClpP/crotonase 32
ValRS/IleRS/LeuRS editing domain Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 33
GAF domain-like Nucleotide cyclase 33
Nucleotidylyl transferase An anticodon-binding domain of class I aminoacyl-tRNA synthetases 31
Chemotaxis receptor methyltransferase CheR, N-terminal domain S-adenosyl-L-methionine-dependent methyltransferases 32
CheY-like CheY-like 33
Pheromone-binding domain of LuxR-like quorum-sensing transcription factors C-terminal effector domain of the bipartite response regulators 31
Class II aaRS and biotin synthetases Class II aaRS ABD-related 33
P-loop containing nucleoside triphosphate hydrolases post-AAA+ oligomerization domain-like 32
Cytochrome c Cytochrome c 33
FAD/NAD(P)-binding domain FAD/NAD(P)-binding domain 33
Nitrite/Sulfite reductase N-terminal domain-like Nitrite and sulphite reductase 4Fe-4S domain-like 33
ACT-like ACT-like 33
HAMP domain-like Methyl-accepting chemotaxis protein (MCP) signaling domain 32
Resolvase-like Homeodomain-like 31
alpha/beta-Hydrolases Galactose-binding domain-like 32
6-phosphogluconate dehydrogenase C-terminal domain-like ClpP/crotonase 32
Fumarylacetoacetate hydrolase, FAH, N-terminal domain FAH 31
PRTase-like PRTase-like 31
TPR-like P-loop containing nucleoside triphosphate hydrolases 32
P-loop containing nucleoside triphosphate hydrolases Class I glutamine amidotransferase-like 31
Triger factor/SurA peptide-binding domain-like FKBP-like 33
LuxS/MPP-like metallohydrolase LuxS/MPP-like metallohydrolase 33
FMN-linked oxidoreductases FAD/NAD(P)-binding domain 32
Glutathione synthetase ATP-binding domain-like Single hybrid motif 32
ValRS/IleRS/LeuRS editing domain Nucleotidylyl transferase 33
Formate dehydrogenase/DMSO reductase, domains 1-3 ADC-like 33
Origin of replication-binding domain, RBD-like P-loop containing nucleoside triphosphate hydrolases 32
Molybdenum cofactor-binding domain Molybdenum cofactor-binding domain 31
Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain 32
Sigma3 and sigma4 domains of RNA polymerase sigma factors Sigma3 and sigma4 domains of RNA polymerase sigma factors 32
MurCD N-terminal domain MurD-like peptide ligases, catalytic domain 32
Rudiment single hybrid motif Single hybrid motif 32
NAD(P)-binding Rossmann-fold domains ClpP/crotonase 32
Nucleotide-binding domain Nucleotide-binding domain 22
MurE/MurF N-terminal domain MurD-like peptide ligases, catalytic domain 21
Penicillin binding protein dimerisation domain beta-lactamase/transpeptidase-like 22
Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain Pyrimidine nucleoside phosphorylase C-terminal domain 21
ThrRS/AlaRS common domain Class II aaRS and biotin synthetases 22
Riboflavin synthase domain-like Ferredoxin reductase-like, C-terminal NADP-linked domain 21
Carbamate kinase-like ACT-like 22
Leukotriene A4 hydrolase N-terminal domain Metalloproteases ("zincins"), catalytic domain 22
Cupredoxins Cupredoxins 21
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase Type II DNA topoisomerase 22
TK C-terminal domain-like Pyruvate-ferredoxin oxidoreductase, PFOR, domain III 22
Chaperone J-domain HSP40/DnaJ peptide-binding domain 22
MurE/MurF N-terminal domain MurD-like peptide ligases, peptide-binding domain 21
Aminoacid dehydrogenase-like, N-terminal domain Isocitrate/Isopropylmalate dehydrogenase-like 21
GreA transcript cleavage protein, N-terminal domain FKBP-like 21
tRNA-binding arm Class II aaRS and biotin synthetases 21
CheY-like "Winged helix" DNA-binding domain 21
Arabinanase/levansucrase/invertase Concanavalin A-like lectins/glucanases 22
E set domains (Trans)glycosidases 22
Double Clp-N motif P-loop containing nucleoside triphosphate hydrolases 21
Class I glutamine amidotransferase-like LD-carboxypeptidase A C-terminal domain-like 21
Nqo1 FMN-binding domain-like Nqo1C-terminal domain-like 22
NAD(P)-binding Rossmann-fold domains Isocitrate/Isopropylmalate dehydrogenase-like 21
Type II DNA topoisomerase GyrA/ParC C-terminal domain-like 22
Adenine nucleotide alpha hydrolases-like Adenine nucleotide alpha hydrolases-like 21
FAD-binding/transporter-associated domain-like CO dehydrogenase flavoprotein C-terminal domain-like 21
Nucleotide-diphospho-sugar transferases Guanosine diphospho-D-mannose pyrophosphorylase/mannose-6-phosphate isomerase linker domain 21
Voltage-gated potassium channels NAD(P)-binding Rossmann-fold domains 22
Nucleic acid-binding proteins Class II aaRS and biotin synthetases 22
CBS-domain pair FAD-binding/transporter-associated domain-like 21
Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain Pyrimidine nucleoside phosphorylase C-terminal domain 21
Ribosomal protein S5 domain 2-like Type II DNA topoisomerase 22
PDZ domain-like PDZ domain-like 22
6-phosphogluconate dehydrogenase C-terminal domain-like UDP-glucose/GDP-mannose dehydrogenase C-terminal domain 21
Glucocorticoid receptor-like (DNA-binding domain) P-loop containing nucleoside triphosphate hydrolases 22
Carbon-nitrogen hydrolase Adenine nucleotide alpha hydrolases-like 22
Alpha-L RNA-binding motif Pseudouridine synthase 21
Nucleotidyltransferase Poly A polymerase C-terminal region-like 22
ACT-like Formyltransferase 21
Nucleic acid-binding proteins P-loop containing nucleoside triphosphate hydrolases 22
EF-G C-terminal domain-like Ribosomal protein S5 domain 2-like 21
NAD(P)-binding Rossmann-fold domains ACT-like 22
NAD(P)-binding Rossmann-fold domains UDP-glucose/GDP-mannose dehydrogenase C-terminal domain 21
FAD/NAD(P)-binding domain Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain 22
2Fe-2S ferredoxin-like Formate dehydrogenase/DMSO reductase, domains 1-3 22
Ribosomal protein S5 domain 2-like Ribonuclease PH domain 2-like 22
2Fe-2S ferredoxin-like Ferredoxin reductase-like, C-terminal NADP-linked domain 21
L30e-like alpha/beta knot 21
CO dehydrogenase molybdoprotein N-domain-like Molybdenum cofactor-binding domain 21
Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain Phosphohistidine domain 22
"Winged helix" DNA-binding domain "Winged helix" DNA-binding domain 22
4Fe-4S ferredoxins Formate dehydrogenase/DMSO reductase, domains 1-3 22
Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain 22
Starch-binding domain-like Porins 21
CheY-like Methylesterase CheB, C-terminal domain 21
FMN-binding split barrel UbiD C-terminal domain-like 21
Peptidase/esterase 'gauge' domain alpha/beta-Hydrolases 21
PYP-like sensor domain (PAS domain) GAF domain-like 22
Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain Phosphoenolpyruvate/pyruvate domain 22
Class I glutamine amidotransferase-like Homeodomain-like 21
Ligand-binding domain in the NO signalling and Golgi transport Homeodomain-like 21
Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex 21
Bacterial muramidases Lysozyme-like 21
GroES-like GroES-like 21
HSP40/DnaJ peptide-binding domain HSP40/DnaJ peptide-binding domain 22
GAF domain-like CheY-like 22
Ligand-binding domain in the NO signalling and Golgi transport P-loop containing nucleoside triphosphate hydrolases 21
"Winged helix" DNA-binding domain Chorismate lyase-like 21
Aconitase iron-sulfur domain LeuD/IlvD-like 22
Translation proteins SH3-like domain Nucleic acid-binding proteins 22
GAF domain-like EAL domain-like 22
Translation proteins EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 22
2Fe-2S ferredoxin-like 4Fe-4S ferredoxins 22
alpha-helical ferredoxin Nucleotide-binding domain 22
DnaK suppressor protein DksA, alpha-hairpin domain Glucocorticoid receptor-like (DNA-binding domain) 21
Nucleic acid-binding proteins RuvA domain 2-like 22
FAD/NAD(P)-binding domain 4Fe-4S ferredoxins 22
Galactose-binding domain-like (Trans)glycosidases 22
Cytochrome c oxidase subunit II-like, transmembrane region Cupredoxins 22
Nucleotidyltransferase ACT-like 22
P-loop containing nucleoside triphosphate hydrolases EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 22
Nqo1 middle domain-like Nqo1C-terminal domain-like 22
2Fe-2S ferredoxin-like Riboflavin synthase domain-like 21
Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like 22
Nucleotide-diphospho-sugar transferases Trimeric LpxA-like enzymes 21
PilZ domain-like lambda repressor-like DNA-binding domains 21
DsbC/DsbG N-terminal domain-like Thioredoxin-like 22
Lysozyme-like beta-lactamase/transpeptidase-like 22
Enolase N-terminal domain-like Enolase C-terminal domain-like 21
Thiamin diphosphate-binding fold (THDP-binding) Pyruvate-ferredoxin oxidoreductase, PFOR, domain III 22
Nqo1 FMN-binding domain-like Nqo1 middle domain-like 22
P-loop containing nucleoside triphosphate hydrolases "Winged helix" DNA-binding domain 22
P-loop containing nucleoside triphosphate hydrolases Restriction endonuclease-like 22
Translation proteins Ribosomal protein S5 domain 2-like 21
Cation efflux protein transmembrane domain-like Cation efflux protein cytoplasmic domain-like 21
Carbamoyl phosphate synthetase, large subunit connection domain Methylglyoxal synthase-like 11
Glutathione synthetase ATP-binding domain-like Methylglyoxal synthase-like 11
Insert subdomain of RNA polymerase alpha subunit RBP11-like subunits of RNA polymerase 11
Nucleic acid-binding proteins Anticodon-binding domain of PheRS 11
Multiheme cytochromes Multiheme cytochromes 11
PK beta-barrel domain-like PK C-terminal domain-like 11
"Winged helix" DNA-binding domain S-adenosyl-L-methionine-dependent methyltransferases 11
PreATP-grasp domain Carbamoyl phosphate synthetase, large subunit connection domain 11
Cyclophilin-like PH0987 N-terminal domain-like 11
DNA repair protein MutS, domain I DNA repair protein MutS, domain III 11
alpha/beta-Hydrolases OsmC-like 11
Nucleotidylyl transferase tRNA-binding arm 11
Class I glutamine amidotransferase-like Adenine nucleotide alpha hydrolases-like 11
DNA ligase/mRNA capping enzyme, catalytic domain RuvA domain 2-like 11
Tetrapyrrole methylase S-adenosyl-L-methionine-dependent methyltransferases 11
Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) ThrRS/AlaRS common domain 11
Class II aaRS ABD-related C-terminal domain of ProRS 11
P-loop containing nucleoside triphosphate hydrolases Prokaryotic type KH domain (KH-domain type II) 11
GroEL equatorial domain-like GroEL-intermediate domain like 11
Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) Translation proteins 11
L9 N-domain-like Ribosomal protein L9 C-domain 11
GAF domain-like Phosphohistidine domain 11
N-terminal domain of MutM-like DNA repair proteins Glucocorticoid receptor-like (DNA-binding domain) 11
Eukaryotic type KH-domain (KH-domain type I) Nucleic acid-binding proteins 11
Alpha-L RNA-binding motif S-adenosyl-L-methionine-dependent methyltransferases 11
Tubulin nucleotide-binding domain-like Tubulin C-terminal domain-like 11
Ribonuclease H-like BRCT domain 11
Ribosomal protein S5 domain 2-like Eukaryotic type KH-domain (KH-domain type I) 11
lambda repressor-like DNA-binding domains PUA domain-like 11
Pre-protein crosslinking domain of SecA Helical scaffold and wing domains of SecA 11
E set domains Glycosyl hydrolase domain 11
P-loop containing nucleoside triphosphate hydrolases C-terminal effector domain of the bipartite response regulators 11
Ada DNA repair protein, N-terminal domain (N-Ada 10) Methylated DNA-protein cysteine methyltransferase, C-terminal domain 11
P-loop containing nucleoside triphosphate hydrolases Signal peptide-binding domain 11
Nucleotide-binding domain FAD/NAD(P)-binding domain 11
Phoshotransferase/anion transport protein Phosphoenolpyruvate/pyruvate domain 11
Tricorn protease N-terminal domain Composite domain of metallo-dependent hydrolases 11
5' to 3' exonuclease, C-terminal subdomain DNA/RNA polymerases 11
Aldolase 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain 11
PUA domain-like Ribosomal protein S5 domain 2-like 11
PurM N-terminal domain-like PurM N-terminal domain-like 11
PheT/TilS domain Putative DNA-binding domain 11
UBA-like Elongation factor Ts (EF-Ts), dimerisation domain 11
P-loop containing nucleoside triphosphate hydrolases TGS-like 11
Subtilisin-like beta-Roll 11
MgtE N-terminal domain-like MgtE membrane domain-like 11
P-loop containing nucleoside triphosphate hydrolases PHP domain-like 11
Homeodomain-like Methylated DNA-protein cysteine methyltransferase, C-terminal domain 11
PreATP-grasp domain PH0987 N-terminal domain-like 11
FAD/NAD(P)-binding domain Nitrite and sulphite reductase 4Fe-4S domain-like 11
Nitrite and sulphite reductase 4Fe-4S domain-like Nitrite and sulphite reductase 4Fe-4S domain-like 11
PA domain Zn-dependent exopeptidases 11
GAF domain-like Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain 11
YjgF-like YjgF-like 11
all-alpha NTP pyrophosphatases all-alpha NTP pyrophosphatases 11
RuvA domain 2-like JAB1/MPN domain 11
HPr-like Phosphoenolpyruvate/pyruvate domain 11
Class II aaRS and biotin synthetases Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) 11
DNA ligase/mRNA capping enzyme, catalytic domain BRCT domain 11
HCP-like Sporulation related repeat 11
Dihydropteroate synthetase-like Methionine synthase domain 11
MFS general substrate transporter MFS general substrate transporter 11
Class I glutamine amidotransferase-like GMP synthetase C-terminal dimerisation domain 11
PEP carboxykinase N-terminal domain PEP carboxykinase-like 11
ThrRS/AlaRS common domain Class II aaRS ABD-related 11
TGS-like Class II aaRS and biotin synthetases 11
beta-lactamase/transpeptidase-like Penicillin-binding protein associated domain 11
Metalloproteases ("zincins"), catalytic domain PDZ domain-like 11
PTS system IIB component-like PTS system IIB component-like 11
N-terminal domain of bifunctional PutA protein ALDH-like 11
Homeodomain-like Acetamidase/Formamidase-like 11
Cyclophilin-like Single hybrid motif 11
Glycosyl hydrolase domain Galactose-binding domain-like 11
P-loop containing nucleoside triphosphate hydrolases Helical scaffold and wing domains of SecA 11
Putative DNA-binding domain P-loop containing nucleoside triphosphate hydrolases 11
Nucleotidyltransferase Nucleotidyltransferase 11
Adenine nucleotide alpha hydrolases-like DHS-like NAD/FAD-binding domain 11
Methionine synthase domain Methionine synthase activation domain-like 11
GAF domain-like GAF domain-like 11
FMN-linked oxidoreductases Alpha subunit of glutamate synthase, C-terminal domain 11
Carbamoyl phosphate synthetase, small subunit N-terminal domain Class I glutamine amidotransferase-like 11
Class II aaRS and biotin synthetases C-terminal domain of ProRS 11
Fe,Mn superoxide dismutase (SOD), N-terminal domain Fe,Mn superoxide dismutase (SOD), C-terminal domain 11
P-loop containing nucleoside triphosphate hydrolases Pre-protein crosslinking domain of SecA 11
Ribosomal protein S5 domain 2-like Nucleic acid-binding proteins 11
GIY-YIG endonuclease RuvA domain 2-like 11
OMPA-like OmpA-like 11
Tryptophan synthase beta subunit-like PLP-dependent enzymes ACT-like 11
Translation proteins Translation proteins 11
TrkA C-terminal domain-like TrkA C-terminal domain-like 11
P-loop containing nucleoside triphosphate hydrolases Tropomyosin 11
Ribosomal L11/L12e N-terminal domain Ribosomal protein L11, C-terminal domain 11
Ribonuclease PH domain 2-like Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 11
NagB/RpiA/CoA transferase-like NagB/RpiA/CoA transferase-like 11
E set domains E set domains 11
4Fe-4S ferredoxins ADC-like 11
Ribosomal protein S5 domain 2-like GHMP Kinase, C-terminal domain 11
Formyltransferase FMT C-terminal domain-like 11
PurM C-terminal domain-like PurM C-terminal domain-like 11
Galactose-binding domain-like beta-Roll 11
S-adenosyl-L-methionine-dependent methyltransferases Putative methyltransferase TM0872, insert domain 11
PIN domain-like 5' to 3' exonuclease, C-terminal subdomain 11
Phoshotransferase/anion transport protein HPr-like 11
Cobalamin (vitamin B12)-binding domain Methionine synthase activation domain-like 11
Thioredoxin-like TPR-like 11
Coiled-coil domain of nucleotide exchange factor GrpE Head domain of nucleotide exchange factor GrpE 11
Nucleotidyltransferase TGS-like 11
Siroheme synthase middle domains-like Tetrapyrrole methylase 11
GAF domain-like Phosphoenolpyruvate/pyruvate domain 11
Methionine synthase domain Cobalamin (vitamin B12)-binding domain 11
Homeodomain-like Methylated DNA-protein cysteine methyltransferase domain 11
Hsp33 domain HSP33 redox switch-like 11
FKBP-like Dimeric alpha+beta barrel 11
Molybdenum cofactor biosynthesis proteins MoeA C-terminal domain-like 11
Nucleic acid-binding proteins BRCT domain 11
beta-N-acetylhexosaminidase-like domain (Trans)glycosidases 11
Galactose mutarotase-like E set domains 11
HAMP domain-like Nucleotide cyclase 11
Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 Nucleic acid-binding proteins 11
FliG FliG 11
LysM domain Duplicated hybrid motif 11
Outer membrane efflux proteins (OEP) HlyD-like secretion proteins 11
beta-Roll beta-Roll 11
DNA ligase/mRNA capping enzyme, catalytic domain Nucleic acid-binding proteins 11
Sigma3 and sigma4 domains of RNA polymerase sigma factors CheY-like 11
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase DNA mismatch repair protein MutL 11
TK C-terminal domain-like 4Fe-4S ferredoxins 11
Phoshotransferase/anion transport protein Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain 11
RmlC-like cupins RmlC-like cupins 11
Methylesterase CheB, C-terminal domain Chemotaxis receptor methyltransferase CheR, N-terminal domain 11
Trigger factor ribosome-binding domain FKBP-like 11
ADC-like Cdc48 domain 2-like 11
Translation proteins ThrRS/AlaRS common domain 11
Prokaryotic type KH domain (KH-domain type II) Prokaryotic type KH domain (KH-domain type II) 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) PRTase-like 11
FAD/NAD(P)-binding domain HI0933 insert domain-like 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) FMN-linked oxidoreductases 11
PHP14-like Phospholipase D/nuclease 11
FAD-linked oxidoreductase ALDH-like 11
TGS-like ThrRS/AlaRS common domain 11
Domain of the SRP/SRP receptor G-proteins P-loop containing nucleoside triphosphate hydrolases 11
Class II aaRS and biotin synthetases Translation proteins 11
PIN domain-like DNA/RNA polymerases 11
Chaperone J-domain DnaJ/Hsp40 cysteine-rich domain 11
HD-domain/PDEase-like Nucleotidyltransferase 11
Periplasmic binding protein-like II Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain 11
Putative DNA-binding domain Anticodon-binding domain of PheRS 11
R1 subunit of ribonucleotide reductase, N-terminal domain PFL-like glycyl radical enzymes 11
Actin-like ATPase domain Heat shock protein 70kD (HSP70), peptide-binding domain 11
CheY-like PP2C-like 11
Acid proteases Acid proteases 11
Methylesterase CheB, C-terminal domain S-adenosyl-L-methionine-dependent methyltransferases 11
Homo-oligomeric flavin-containing Cys decarboxylases, HFCD CoaB-like 11
ValRS/IleRS/LeuRS editing domain tRNA-binding arm 11
Aconitase B, N-terminal domain LeuD/IlvD-like 11
Trypsin-like serine proteases PDZ domain-like 11
P-loop containing nucleoside triphosphate hydrolases Hypothetical protein YjiA, C-terminal domain 11
P-loop containing nucleoside triphosphate hydrolases TrpR-like 11
DPP6 N-terminal domain-like Composite domain of metallo-dependent hydrolases 11
GIY-YIG endonuclease C-terminal UvrC-binding domain of UvrB 11
PPK N-terminal domain-like Phospholipase D/nuclease 11
Phoshotransferase/anion transport protein Phosphohistidine domain 11
Class II aaRS and biotin synthetases C-terminal domain of transcriptional repressors 11
"Winged helix" DNA-binding domain LexA/Signal peptidase 11
Methylesterase CheB, C-terminal domain PYP-like sensor domain (PAS domain) 11
HD-domain/PDEase-like ACT-like 11
Rudiment single hybrid motif PH0987 N-terminal domain-like 11
GAF domain-like Homodimeric domain of signal transducing histidine kinase 11
"Winged helix" DNA-binding domain NagB/RpiA/CoA transferase-like 11
YrdC/RibB RibA-like 11
Cryptochrome/photolyase, N-terminal domain Cryptochrome/photolyase FAD-binding domain 11
MoeA N-terminal region -like Molybdenum cofactor biosynthesis proteins 11
FKBP-like FKBP-like 11
Serine metabolism enzymes domain ACT-like 11
Class II aaRS and biotin synthetases Anticodon-binding domain of PheRS 11
Transcription factor NusA, N-terminal domain Rad51 N-terminal domain-like 11
PK beta-barrel domain-like Phosphoenolpyruvate/pyruvate domain 11
DinB/YfiT-like putative metalloenzymes C-type lectin-like 11
TrmE connector domain P-loop containing nucleoside triphosphate hydrolases 11
S-adenosyl-L-methionine-dependent methyltransferases PYP-like sensor domain (PAS domain) 11
Adenine nucleotide alpha hydrolases-like Argininosuccinate synthetase, C-terminal domain 11
PilZ domain-like PilZ domain-like 11
YjeF N-terminal domain-like Ribokinase-like 11
C-terminal UvrC-binding domain of UvrB RuvA domain 2-like 11
Ada DNA repair protein, N-terminal domain (N-Ada 10) Homeodomain-like 11
Cdc48 domain 2-like P-loop containing nucleoside triphosphate hydrolases 11
Tricorn protease N-terminal domain Metallo-dependent hydrolases 11
DNA repair protein MutS, domain I P-loop containing nucleoside triphosphate hydrolases 11
Glutathione synthetase ATP-binding domain-like Carbamoyl phosphate synthetase, large subunit connection domain 11
FabD/lysophospholipase-like Probable ACP-binding domain of malonyl-CoA ACP transacylase 11
Nucleic acid-binding proteins PheT/TilS domain 11
Globin-like Methyl-accepting chemotaxis protein (MCP) signaling domain 11
Nucleic acid-binding proteins Rad51 N-terminal domain-like 11
PreATP-grasp domain Methylglyoxal synthase-like 11
Ferritin-like Calcium ATPase, transduction domain A 11
2Fe-2S ferredoxin-like ADC-like 11
TPR-like Sporulation related repeat 11
Calcium-dependent phosphotriesterase ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 11
TPR-like C-terminal effector domain of the bipartite response regulators 11
Single hybrid motif TK C-terminal domain-like 11
Metallo-dependent phosphatases 5'-nucleotidase (syn. UDP-sugar hydrolase), C-terminal domain 11
Formate/glycerate dehydrogenase catalytic domain-like Serine metabolism enzymes domain 11
Rho N-terminal domain-like P-loop containing nucleoside triphosphate hydrolases 11
HPr-like Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain 11
Metalloproteases ("zincins"), catalytic domain ARM repeat 11
Homodimeric domain of signal transducing histidine kinase CheW-like 11
Hypothetical protein SAV1430 Fe-S cluster assembly (FSCA) domain-like 11
Radical SAM enzymes RuvA domain 2-like 11
Ribosomal protein S5 domain 2-like DNA mismatch repair protein MutL 11
N-terminal domain of bifunctional PutA protein FAD-linked oxidoreductase 11
MgtE N-terminal domain-like CBS-domain pair 11
Ribosomal protein L7/12, oligomerisation (N-terminal) domain ClpS-like 11
HRDC-like HRDC-like 11
Nucleotide-diphospho-sugar transferases PilZ domain-like 11
Methylglyoxal synthase-like Cytidine deaminase-like 11
Rad51 N-terminal domain-like Rad51 N-terminal domain-like 11
Nucleic acid-binding proteins DNA helicase RuvA subunit, C-terminal domain 11
Nucleotide cyclase PilZ domain-like 11
5' to 3' exonuclease, C-terminal subdomain Ribonuclease H-like 11
Transcription factor NusA, N-terminal domain Prokaryotic type KH domain (KH-domain type II) 11
P-loop containing nucleoside triphosphate hydrolases Initiation factor IF2/eIF5b, domain 3 11
GroEL-intermediate domain like GroEL apical domain-like 11
Alkaline phosphatase-like ARM repeat 11
Heme-dependent peroxidases Heme-dependent peroxidases 11
Rhodanese/Cell cycle control phosphatase Rhodanese/Cell cycle control phosphatase 11
2Fe-2S ferredoxin-like alpha-helical ferredoxin 11
RuvA domain 2-like DNA helicase RuvA subunit, C-terminal domain 11
PUA domain-like P-loop containing nucleoside triphosphate hydrolases 11
Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 11
UDP-Glycosyltransferase/glycogen phosphorylase UDP-Glycosyltransferase/glycogen phosphorylase 11
Ribosomal protein S5 domain 2-like Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 11
Galactose mutarotase-like Six-hairpin glycosidases 11
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase CheW-like 11
Inosine monophosphate dehydrogenase (IMPDH) Nitrite and sulphite reductase 4Fe-4S domain-like 11
lambda repressor-like DNA-binding domains Cyanase C-terminal domain 11
Nicotinate/Quinolinate PRTase N-terminal domain-like Nicotinate/Quinolinate PRTase C-terminal domain-like 11
Acyl-CoA N-acyltransferases (Nat) Carbon-nitrogen hydrolase 11
YlxR-like L30e-like 11
NAD(P)-binding Rossmann-fold domains Tetrapyrrole methylase 11
Calcium ATPase, transduction domain A Metal cation-transporting ATPase, ATP-binding domain N 11
HAMP domain-like PYP-like sensor domain (PAS domain) 11
Prokaryotic type I DNA topoisomerase Zinc beta-ribbon 11
PIN domain-like Acyl-CoA N-acyltransferases (Nat) 11
Dihydropteroate synthetase-like Methionine synthase activation domain-like 11
Methylated DNA-protein cysteine methyltransferase domain Methylated DNA-protein cysteine methyltransferase, C-terminal domain 11
P-loop containing nucleoside triphosphate hydrolases C-terminal UvrC-binding domain of UvrB 11
Heat shock protein 70kD (HSP70), peptide-binding domain Heat shock protein 70kD (HSP70), C-terminal subdomain 11
ADC-like P-loop containing nucleoside triphosphate hydrolases 11
Periplasmic binding protein-like II ACT-like 11
HAMP domain-like GAF domain-like 11
PGBD-like L,D-transpeptidase catalytic domain-like 11
Actin-like ATPase domain Heat shock protein 70kD (HSP70), C-terminal subdomain 11
Nucleotidyltransferase substrate binding subunit/domain ACT-like 11
DPP6 N-terminal domain-like Metallo-dependent hydrolases 11
Nucleotidylyl transferase Alpha-L RNA-binding motif 11
Thioredoxin-like FAD/NAD(P)-binding domain 11
Nucleic acid-binding proteins Prokaryotic type KH domain (KH-domain type II) 11
PreATP-grasp domain Cyclophilin-like 11
Thiamin diphosphate-binding fold (THDP-binding) 4Fe-4S ferredoxins 11
E set domains Six-hairpin glycosidases 11
DNA/RNA polymerases Lesion bypass DNA polymerase (Y-family), little finger domain 11
DnaJ/Hsp40 cysteine-rich domain HSP40/DnaJ peptide-binding domain 11
cAMP-binding domain-like cAMP-binding domain-like 11
Glutathione synthetase ATP-binding domain-like Glutathione synthetase ATP-binding domain-like 11
Galactose-binding domain-like SGNH hydrolase 11
FAD-linked reductases, C-terminal domain 4Fe-4S ferredoxins 11
GlcG-like GlcG-like 11
Metal cation-transporting ATPase, ATP-binding domain N HAD-like 11
Prokaryotic type KH domain (KH-domain type II) Rad51 N-terminal domain-like 11
Ribonuclease PH domain 2-like Eukaryotic type KH-domain (KH-domain type I) 11
Riboflavin synthase domain-like Riboflavin synthase domain-like 11
PDZ domain-like ClpP/crotonase 11
NAD(P)-binding Rossmann-fold domains 1-deoxy-D-xylulose-5-phosphate reductoisomerase, C-terminal domain 11
PreATP-grasp domain PreATP-grasp domain 11
Phosphoenolpyruvate/pyruvate domain PK C-terminal domain-like 11
Leukotriene A4 hydrolase N-terminal domain ARM repeat 11
P-loop containing nucleoside triphosphate hydrolases RecA protein, C-terminal domain 11
Putative DNA-binding domain Class II aaRS and biotin synthetases 11
N-utilization substance G protein NusG, N-terminal domain Translation proteins SH3-like domain 11
Cobalamin (vitamin B12)-dependent enzymes Cobalamin (vitamin B12)-binding domain 11
Rho N-terminal domain-like Nucleic acid-binding proteins 11
Formate/glycerate dehydrogenase catalytic domain-like ACT-like 11
Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 Eukaryotic type KH-domain (KH-domain type I) 11
Poly A polymerase C-terminal region-like ACT-like 11
FAD/NAD(P)-binding domain Nitrite/Sulfite reductase N-terminal domain-like 11
Adenine nucleotide alpha hydrolases-like GMP synthetase C-terminal dimerisation domain 11
PheT/TilS domain Anticodon-binding domain of PheRS 11
PPK N-terminal domain-like PHP14-like 11
Folate-binding domain P-loop containing nucleoside triphosphate hydrolases 11
Ribosomal protein L6 Ribosomal protein L6 11
NusB-like S-adenosyl-L-methionine-dependent methyltransferases 11
Periplasmic binding protein-like II Voltage-gated potassium channels 11
cAMP-binding domain-like 4Fe-4S ferredoxins 11
Ada DNA repair protein, N-terminal domain (N-Ada 10) Methylated DNA-protein cysteine methyltransferase domain 11
Ferritin-like HAD-like 11
Voltage-gated potassium channels TrkA C-terminal domain-like 11
GroEL equatorial domain-like GroEL apical domain-like 11
(Phosphotyrosine protein) phosphatases II FAD/NAD(P)-binding domain 11
Galactose-binding domain-like beta-Galactosidase/glucuronidase domain 11
DNA clamp DNA clamp 11
DNA repair protein MutS, domain II DNA repair protein MutS, domain III 11
Ribonuclease H-like DNA/RNA polymerases 11
MFS general substrate transporter ARM repeat 11
Nucleic acid-binding proteins Putative DNA-binding domain 11
TGS-like Class II aaRS ABD-related 11
Nucleotide-diphospho-sugar transferases IpsF-like 11
Trigger factor ribosome-binding domain Triger factor/SurA peptide-binding domain-like 11
N-terminal domain of DnaB helicase P-loop containing nucleoside triphosphate hydrolases 11
NAD(P)-binding Rossmann-fold domains TrkA C-terminal domain-like 11
Aconitase B, N-terminal domain Aconitase iron-sulfur domain 11
Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases tRNA-binding arm 11
DNA repair protein MutS, domain I DNA repair protein MutS, domain II 11
RmlC-like cupins Homeodomain-like 11
Xylose isomerase-like Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 11
Translation proteins Initiation factor IF2/eIF5b, domain 3 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) SIS domain 11
Macro domain-like Zn-dependent exopeptidases 11
Pyruvate-ferredoxin oxidoreductase, PFOR, domain III 4Fe-4S ferredoxins 11
Nucleic acid-binding proteins GAD domain-like 11
Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain ACT-like 11
ClpP/crotonase NfeD domain-like 11
Insert subdomain of RNA polymerase alpha subunit C-terminal domain of RNA polymerase alpha subunit 11
post-HMGL domain-like 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain 11
FMN-linked oxidoreductases Nucleotide-binding domain 11
S-adenosylmethionine synthetase S-adenosylmethionine synthetase 11
SMAD/FHA domain Multiheme cytochromes 11
S13-like H2TH domain Glucocorticoid receptor-like (DNA-binding domain) 11
Galactose mutarotase-like (Trans)glycosidases 11
Prokaryotic type KH domain (KH-domain type II) Ribosomal protein S3 C-terminal domain 11
Metal cation-transporting ATPase, ATP-binding domain N Calcium ATPase, transmembrane domain M 11
Tricorn protease N-terminal domain DPP6 N-terminal domain-like 11
Nitrite/Sulfite reductase N-terminal domain-like Nitrite/Sulfite reductase N-terminal domain-like 11
DNA repair protein MutS, domain III P-loop containing nucleoside triphosphate hydrolases 11
Translation initiation factor IF3, N-terminal domain Translation initiation factor IF3, C-terminal domain 11
Ribonuclease PH domain 2-like Ribonuclease PH domain 2-like 11
N-acetylmuramoyl-L-alanine amidase-like PGBD-like 11
Alkaline phosphatase-like Concanavalin A-like lectins/glucanases 11
Ferritin-like Calcium ATPase, transmembrane domain M 11
MoeA N-terminal region -like MoeA C-terminal domain-like 11
Acetyl-CoA synthetase-like Heme oxygenase-like 11
PIN domain-like Ribonuclease H-like 11
RNase III domain-like dsRNA-binding domain-like 11
DNA methylase specificity domain DNA methylase specificity domain 11
Aspartate/glutamate racemase Aspartate/glutamate racemase 11
DNA repair protein MutS, domain II P-loop containing nucleoside triphosphate hydrolases 11
Carbamate kinase-like PUA domain-like 11
Folate-binding domain TrmE connector domain 11
CBS-domain pair Inosine monophosphate dehydrogenase (IMPDH) 11
Cytidine deaminase-like Dihydrofolate reductase-like 11
Obg GTP-binding protein N-terminal domain P-loop containing nucleoside triphosphate hydrolases 11
P-loop containing nucleoside triphosphate hydrolases HRDC-like 11
Composite domain of metallo-dependent hydrolases Composite domain of metallo-dependent hydrolases 11
Chemotaxis receptor methyltransferase CheR, N-terminal domain PYP-like sensor domain (PAS domain) 11
DNA-glycosylase Nudix 11
Elongation factor Ts (EF-Ts), dimerisation domain Elongation factor Ts (EF-Ts), dimerisation domain 11
Single hybrid motif Thiamin diphosphate-binding fold (THDP-binding) 11
Sm-like ribonucleoproteins Sm-like ribonucleoproteins 11
PH0987 N-terminal domain-like Single hybrid motif 11
AraD/HMP-PK domain-like NAD(P)-binding Rossmann-fold domains 11
dsRNA-binding domain-like Ribosomal protein S5 domain 2-like 11
LysM domain LysM domain 11
Creatinase/prolidase N-terminal domain Creatinase/prolidase N-terminal domain 11
NAD(P)-binding Rossmann-fold domains Siroheme synthase middle domains-like 11
Folate-binding domain Aminomethyltransferase beta-barrel domain 11
Transmembrane di-heme cytochromes a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) 11
Nucleotidyltransferase substrate binding subunit/domain Poly A polymerase C-terminal region-like 11
N-terminal nucleophile aminohydrolases (Ntn hydrolases) Alpha subunit of glutamate synthase, C-terminal domain 11
CarD-like TRCF domain-like 11
PYP-like sensor domain (PAS domain) PilZ domain-like 11
"Winged helix" DNA-binding domain SCP-like 11
Nucleotidylyl transferase Riboflavin kinase-like 11
N-terminal domain of MutM-like DNA repair proteins S13-like H2TH domain 11
Zinc beta-ribbon DNA primase core 11
HPr-like Phosphohistidine domain 11
Beta-D-glucan exohydrolase, C-terminal domain Anthrax protective antigen 11
Sigma3 and sigma4 domains of RNA polymerase sigma factors NTF2-like 11
PUA domain-like alpha/beta knot 11
Glutathione synthetase ATP-binding domain-like PH0987 N-terminal domain-like 11
Dihydropteroate synthetase-like Cobalamin (vitamin B12)-binding domain 11
ADC synthase D-aminoacid aminotransferase-like PLP-dependent enzymes 11
HD-domain/PDEase-like TGS-like 11
Nucleotidyltransferase substrate binding subunit/domain Nucleotidyltransferase substrate binding subunit/domain 11
NAD(P)-binding Rossmann-fold domains Serine metabolism enzymes domain 11
Galactose mutarotase-like Galactose mutarotase-like 11
Urease metallochaperone UreE, N-terminal domain Urease metallochaperone UreE, C-terminal domain 11
RuvA domain 2-like BRCT domain 11
Ribonuclease PH domain 2-like Nucleic acid-binding proteins 11
Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain Nucleotidylyl transferase 11
Ribonuclease H-like HRDC-like 11
PP2C-like Protein kinase-like (PK-like) 11
Rudiment single hybrid motif Cyclophilin-like 11
Ribbon-helix-helix ACT-like 11
RBP11-like subunits of RNA polymerase C-terminal domain of RNA polymerase alpha subunit 11
P-loop containing nucleoside triphosphate hydrolases CarD-like 11
YhbC-like, N-terminal domain YhbC-like, C-terminal domain 11
Galactose mutarotase-like Glycosyl hydrolase domain 11
cAMP-binding domain-like SMAD/FHA domain 11
Cyclophilin-like Cyclophilin-like 11
PheT/TilS domain Class II aaRS and biotin synthetases 11
Thioredoxin-like Thioredoxin-like 11
Glutamine synthetase/guanido kinase GatB/YqeY motif 11
Homeodomain-like Ribonuclease H-like 11
Sigma2 domain of RNA polymerase sigma factors NTF2-like 11
Subtilisin-like Galactose-binding domain-like 11
beta-Galactosidase/glucuronidase domain (Trans)glycosidases 11
TolB, N-terminal domain Tricorn protease N-terminal domain 11
Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 1-deoxy-D-xylulose-5-phosphate reductoisomerase, C-terminal domain 11
NAD(P)-binding Rossmann-fold domains LDH C-terminal domain-like 11
alpha/beta-Hydrolases alpha/beta-Hydrolases 11
EAL domain-like PilZ domain-like 11
Transcription factor NusA, N-terminal domain Nucleic acid-binding proteins 11
CBS-domain pair MgtE membrane domain-like 11
Class II aaRS and biotin synthetases GAD domain-like 11
Glutamine synthetase, N-terminal domain Glutamine synthetase/guanido kinase 11
P-loop containing nucleoside triphosphate hydrolases TRCF domain-like 11
CorA soluble domain-like Magnesium transport protein CorA, transmembrane region 11
FAD/NAD(P)-binding domain cAMP-binding domain-like 11
(Trans)glycosidases Anthrax protective antigen 11
Glutathione synthetase ATP-binding domain-like Cyclophilin-like 11
TGS-like ACT-like 11
Translation proteins PRC-barrel domain 11

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